AlfalfaGEDB | MS.gene059269

M. sativa cultivar XinJiangDaYe / MS.gene059269

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene059269.t1	AES70414.1	53.5	129	59	1	31	159	153	280	3.70E-28	135.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene059269.t1	G7J017	53.5	129	59	1	31	159	153	280	2.7e-28	135.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene89815	MS.gene059269	PPI
MS.gene028714	MS.gene059269	PPI
MS.gene049610	MS.gene059269	PPI
MS.gene017586	MS.gene059269	PPI
MS.gene038676	MS.gene059269	PPI
MS.gene060718	MS.gene059269	PPI
MS.gene059269	MS.gene068629	PPI
MS.gene71637	MS.gene059269	PPI
MS.gene059269	MS.gene004417	PPI
MS.gene059269	MS.gene009781	PPI
MS.gene042651	MS.gene059269	PPI
MS.gene059269	MS.gene019177	PPI
MS.gene05576	MS.gene059269	PPI
MS.gene52349	MS.gene059269	PPI
MS.gene98467	MS.gene059269	PPI
MS.gene059269	MS.gene21066	PPI
MS.gene059269	MS.gene009213	PPI
MS.gene059269	MS.gene98127	PPI
MS.gene037049	MS.gene059269	PPI
MS.gene034643	MS.gene059269	PPI
MS.gene059269	MS.gene003264	PPI
MS.gene037634	MS.gene059269	PPI
MS.gene016719	MS.gene059269	PPI
MS.gene071784	MS.gene059269	PPI
MS.gene059269	MS.gene89815	PPI
MS.gene059269	MS.gene018474	PPI
MS.gene059269	MS.gene048088	PPI
MS.gene059269	MS.gene86868	PPI
MS.gene027169	MS.gene059269	PPI
MS.gene061579	MS.gene059269	PPI
MS.gene76420	MS.gene059269	PPI
MS.gene071320	MS.gene059269	PPI
MS.gene42903	MS.gene059269	PPI
MS.gene81712	MS.gene059269	PPI
MS.gene059269	MS.gene96163	PPI
MS.gene026680	MS.gene059269	PPI
MS.gene048747	MS.gene059269	PPI
MS.gene042559	MS.gene059269	PPI
MS.gene22200	MS.gene059269	PPI
MS.gene059269	MS.gene34463	PPI
MS.gene26038	MS.gene059269	PPI
MS.gene85308	MS.gene059269	PPI
MS.gene073573	MS.gene059269	PPI
MS.gene031967	MS.gene059269	PPI
MS.gene059269	MS.gene61499	PPI
MS.gene34812	MS.gene059269	PPI
MS.gene02896	MS.gene059269	PPI
MS.gene063214	MS.gene059269	PPI
MS.gene55682	MS.gene059269	PPI
MS.gene97410	MS.gene059269	PPI
MS.gene32415	MS.gene059269	PPI
MS.gene059269	MS.gene81194	PPI
MS.gene035626	MS.gene059269	PPI
MS.gene067340	MS.gene059269	PPI
MS.gene059269	MS.gene019001	PPI
MS.gene65623	MS.gene059269	PPI
MS.gene71675	MS.gene059269	PPI
MS.gene019177	MS.gene059269	PPI
MS.gene059269	MS.gene53904	PPI
MS.gene69495	MS.gene059269	PPI
MS.gene049512	MS.gene059269	PPI
MS.gene038623	MS.gene059269	PPI
MS.gene059269	MS.gene025675	PPI
MS.gene05357	MS.gene059269	PPI
MS.gene032311	MS.gene059269	PPI
MS.gene64178	MS.gene059269	PPI
MS.gene004417	MS.gene059269	PPI
MS.gene059269	MS.gene55209	PPI
MS.gene86849	MS.gene059269	PPI
MS.gene50392	MS.gene059269	PPI
MS.gene072852	MS.gene059269	PPI
MS.gene059269	MS.gene022929	PPI
MS.gene059269	MS.gene007022	PPI
MS.gene39956	MS.gene059269	PPI
MS.gene021968	MS.gene059269	PPI
MS.gene059269	MS.gene52349	PPI
MS.gene09589	MS.gene059269	PPI
MS.gene059269	MS.gene048342	PPI
MS.gene43393	MS.gene059269	PPI
MS.gene059269	MS.gene069624	PPI
MS.gene057828	MS.gene059269	PPI
MS.gene34197	MS.gene059269	PPI
MS.gene059269	MS.gene013890	PPI
MS.gene66650	MS.gene059269	PPI
MS.gene005120	MS.gene059269	PPI
MS.gene059269	MS.gene016719	PPI
MS.gene059269	MS.gene028714	PPI
MS.gene059269	MS.gene88393	PPI
MS.gene059269	MS.gene048706	PPI
MS.gene048072	MS.gene059269	PPI
MS.gene060386	MS.gene059269	PPI
MS.gene71588	MS.gene059269	PPI
MS.gene059269	MS.gene69586	PPI
MS.gene059269	MS.gene45083	PPI
MS.gene059269	MS.gene049561	PPI
MS.gene04749	MS.gene059269	PPI
MS.gene059269	MS.gene008658	PPI
MS.gene05436	MS.gene059269	PPI
MS.gene059269	MS.gene49057	PPI
MS.gene059269	MS.gene63150	PPI
MS.gene059736	MS.gene059269	PPI
MS.gene70932	MS.gene059269	PPI
MS.gene35175	MS.gene059269	PPI
MS.gene059269	MS.gene08708	PPI
MS.gene021965	MS.gene059269	PPI
MS.gene055683	MS.gene059269	PPI
MS.gene042614	MS.gene059269	PPI
MS.gene41643	MS.gene059269	PPI
MS.gene26844	MS.gene059269	PPI
MS.gene021555	MS.gene059269	PPI
MS.gene021647	MS.gene059269	PPI
MS.gene96109	MS.gene059269	PPI
MS.gene019165	MS.gene059269	PPI
MS.gene048706	MS.gene059269	PPI
MS.gene059269	MS.gene000640	PPI
MS.gene059269	MS.gene012889	PPI
MS.gene059269	MS.gene000506	PPI
MS.gene009121	MS.gene059269	PPI
MS.gene94654	MS.gene059269	PPI
MS.gene51804	MS.gene059269	PPI
MS.gene87845	MS.gene059269	PPI
MS.gene36069	MS.gene059269	PPI
MS.gene059269	MS.gene028716	PPI
MS.gene059269	MS.gene74639	PPI
MS.gene059269	MS.gene071133	PPI
MS.gene059269	MS.gene60266	PPI
MS.gene059269	MS.gene54051	PPI
MS.gene059269	MS.gene22111	PPI
MS.gene83772	MS.gene059269	PPI
MS.gene009213	MS.gene059269	PPI
MS.gene059269	MS.gene010290	PPI
MS.gene008927	MS.gene059269	PPI
MS.gene059269	MS.gene37955	PPI
MS.gene045614	MS.gene059269	PPI
MS.gene96541	MS.gene059269	PPI
MS.gene049561	MS.gene059269	PPI
MS.gene059269	MS.gene92517	PPI
MS.gene000634	MS.gene059269	PPI
MS.gene63762	MS.gene059269	PPI
MS.gene059269	MS.gene010890	PPI
MS.gene059269	MS.gene84790	PPI
MS.gene30208	MS.gene059269	PPI
MS.gene028716	MS.gene059269	PPI
MS.gene025873	MS.gene059269	PPI
MS.gene06164	MS.gene059269	PPI
MS.gene013676	MS.gene059269	PPI
MS.gene55209	MS.gene059269	PPI
MS.gene05358	MS.gene059269	PPI
MS.gene030090	MS.gene059269	PPI
MS.gene95561	MS.gene059269	PPI
MS.gene96174	MS.gene059269	PPI
MS.gene074257	MS.gene059269	PPI
MS.gene059269	MS.gene060788	PPI
MS.gene018196	MS.gene059269	PPI
MS.gene065627	MS.gene059269	PPI
MS.gene059269	MS.gene77990	PPI
MS.gene059269	MS.gene062511	PPI
MS.gene57019	MS.gene059269	PPI
MS.gene059269	MS.gene027994	PPI
MS.gene018745	MS.gene059269	PPI
MS.gene65546	MS.gene059269	PPI
MS.gene000506	MS.gene059269	PPI
MS.gene03936	MS.gene059269	PPI
MS.gene059269	MS.gene69584	PPI
MS.gene038098	MS.gene059269	PPI
MS.gene60059	MS.gene059269	PPI
MS.gene059269	MS.gene46353	PPI
MS.gene22111	MS.gene059269	PPI
MS.gene28545	MS.gene059269	PPI
MS.gene059269	MS.gene51799	PPI
MS.gene28718	MS.gene059269	PPI
MS.gene059269	MS.gene61651	PPI
MS.gene055560	MS.gene059269	PPI
MS.gene008275	MS.gene059269	PPI
MS.gene038757	MS.gene059269	PPI
MS.gene064966	MS.gene059269	PPI
MS.gene059269	MS.gene09023	PPI
MS.gene059269	MS.gene054508	PPI
MS.gene059269	MS.gene025987	PPI
MS.gene002590	MS.gene059269	PPI
MS.gene059269	MS.gene95960	PPI
MS.gene059269	MS.gene053373	PPI
MS.gene40828	MS.gene059269	PPI
MS.gene43924	MS.gene059269	PPI
MS.gene046089	MS.gene059269	PPI
MS.gene047954	MS.gene059269	PPI
MS.gene036423	MS.gene059269	PPI
MS.gene059269	MS.gene65474	PPI
MS.gene059269	MS.gene025401	PPI
MS.gene054652	MS.gene059269	PPI
MS.gene059269	MS.gene015093	PPI
MS.gene013644	MS.gene059269	PPI
MS.gene059269	MS.gene06164	PPI
MS.gene059269	MS.gene50392	PPI
MS.gene059269	MS.gene22730	PPI
MS.gene059269	MS.gene000379	PPI
MS.gene72520	MS.gene059269	PPI
MS.gene059269	MS.gene032299	PPI
MS.gene66651	MS.gene059269	PPI
MS.gene059269	MS.gene08606	PPI
MS.gene35202	MS.gene059269	PPI
MS.gene051449	MS.gene059269	PPI
MS.gene63743	MS.gene059269	PPI
MS.gene059269	MS.gene09517	PPI
MS.gene059269	MS.gene98756	PPI
MS.gene059269	MS.gene87845	PPI
MS.gene48477	MS.gene059269	PPI
MS.gene045875	MS.gene059269	PPI
MS.gene059269	MS.gene62249	PPI
MS.gene30136	MS.gene059269	PPI
MS.gene008861	MS.gene059269	PPI
MS.gene61452	MS.gene059269	PPI
MS.gene73261	MS.gene059269	PPI
MS.gene024297	MS.gene059269	PPI
MS.gene83979	MS.gene059269	PPI
MS.gene016102	MS.gene059269	PPI
MS.gene46941	MS.gene059269	PPI
MS.gene85295	MS.gene059269	PPI
MS.gene059269	MS.gene044729	PPI
MS.gene47792	MS.gene059269	PPI
MS.gene46948	MS.gene059269	PPI
MS.gene98471	MS.gene059269	PPI
MS.gene059269	MS.gene60390	PPI
MS.gene012019	MS.gene059269	PPI
MS.gene059269	MS.gene039692	PPI
MS.gene059269	MS.gene027169	PPI
MS.gene93396	MS.gene059269	PPI
MS.gene05231	MS.gene059269	PPI
MS.gene010656	MS.gene059269	PPI
MS.gene000629	MS.gene059269	PPI
MS.gene059269	MS.gene024297	PPI
MS.gene40469	MS.gene059269	PPI
MS.gene041264	MS.gene059269	PPI
MS.gene41979	MS.gene059269	PPI
MS.gene059269	MS.gene057934	PPI
MS.gene059269	MS.gene37537	PPI
MS.gene059269	MS.gene024841	PPI
MS.gene024522	MS.gene059269	PPI
MS.gene059269	MS.gene069786	PPI
MS.gene64130	MS.gene059269	PPI
MS.gene05319	MS.gene059269	PPI
MS.gene56991	MS.gene059269	PPI
MS.gene050679	MS.gene059269	PPI
MS.gene059269	MS.gene42010	PPI
MS.gene059269	MS.gene025158	PPI
MS.gene85538	MS.gene059269	PPI
MS.gene059269	MS.gene27329	PPI
MS.gene20246	MS.gene059269	PPI
MS.gene055223	MS.gene059269	PPI
MS.gene059269	MS.gene41393	PPI
MS.gene053747	MS.gene059269	PPI
MS.gene059269	MS.gene016632	PPI
MS.gene65471	MS.gene059269	PPI
MS.gene061850	MS.gene059269	PPI
MS.gene059269	MS.gene40469	PPI
MS.gene26433	MS.gene059269	PPI
MS.gene059269	MS.gene043140	PPI
MS.gene22730	MS.gene059269	PPI
MS.gene073582	MS.gene059269	PPI
MS.gene059269	MS.gene03149	PPI
MS.gene058889	MS.gene059269	PPI
MS.gene98616	MS.gene059269	PPI
MS.gene059269	MS.gene29321	PPI
MS.gene042027	MS.gene059269	PPI
MS.gene69490	MS.gene059269	PPI
MS.gene015248	MS.gene059269	PPI
MS.gene80362	MS.gene059269	PPI
MS.gene059269	MS.gene24278	PPI
MS.gene059269	MS.gene34618	PPI
MS.gene44083	MS.gene059269	PPI
MS.gene013193	MS.gene059269	PPI
MS.gene059269	MS.gene59460	PPI
MS.gene04970	MS.gene059269	PPI
MS.gene08106	MS.gene059269	PPI
MS.gene059269	MS.gene060773	PPI
MS.gene51799	MS.gene059269	PPI
MS.gene58419	MS.gene059269	PPI
MS.gene059269	MS.gene08713	PPI
MS.gene059269	MS.gene038394	PPI
MS.gene23521	MS.gene059269	PPI
MS.gene63150	MS.gene059269	PPI
MS.gene059269	MS.gene24070	PPI
MS.gene059269	MS.gene73261	PPI
MS.gene29406	MS.gene059269	PPI
MS.gene86275	MS.gene059269	PPI
MS.gene059269	MS.gene055546	PPI
MS.gene87529	MS.gene059269	PPI
MS.gene024405	MS.gene059269	PPI
MS.gene012748	MS.gene059269	PPI
MS.gene04134	MS.gene059269	PPI
MS.gene062067	MS.gene059269	PPI
MS.gene059269	MS.gene44144	PPI
MS.gene57044	MS.gene059269	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene059269.t1	MTR_3g053920	53.488	129	59	1	31	159	153	280	3.37e-34	123
MS.gene059269.t1	MTR_8g463110	57.851	121	48	2	102	221	1	119	9.55e-26	104
MS.gene059269.t1	MTR_4g103530	67.188	64	21	0	64	127	119	182	3.16e-22	90.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 56 sgRNAs with CRISPR-Local

Find 71 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTACATGTACTGGTCTATA+TGG	0.263632	4.4:-74959862	MS.gene059269:CDS
ATTTGTTGCTGATGGGGATT+TGG	0.269350	4.4:-74959644	MS.gene059269:CDS
GATTTGGGAAACAATGTAAT+AGG	0.361104	4.4:-74959628	MS.gene059269:CDS
GCTCCACACGTGACTACTTT+AGG	0.367894	4.4:-74959994	MS.gene059269:CDS
CTGATGATGGTGTTAGGAAT+TGG	0.377248	4.4:-74960137	MS.gene059269:CDS
TTTGTTGCTGATGGGGATTT+GGG	0.401550	4.4:-74959643	MS.gene059269:CDS
TGATGATGGTGTTAGGAATT+GGG	0.402058	4.4:-74960136	MS.gene059269:CDS
TTTCTGCCTTCTTCTTCAAC+AGG	0.408021	4.4:-74959829	MS.gene059269:CDS
CCCAACCGACATGTGGTGCT+TGG	0.425546	4.4:-74959784	MS.gene059269:CDS
AGCATCCTGTCATTAAAATT+CGG	0.429494	4.4:+74959958	None:intergenic
CTGTCTCTTTCACACATGTT+GGG	0.432759	4.4:-74959753	MS.gene059269:CDS
TGATTGAGGTTATCTGAGTC+TGG	0.450615	4.4:+74959929	None:intergenic
CTGGTTCTGAATTGAAGAAA+AGG	0.452237	4.4:-74959702	MS.gene059269:CDS
CCAAGCACCACATGTCGGTT+GGG	0.462207	4.4:+74959784	None:intergenic
ATGTCGGTTGGGCAGCAAGC+TGG	0.463983	4.4:+74959795	None:intergenic
GCTGTCTCTTTCACACATGT+TGG	0.467225	4.4:-74959754	MS.gene059269:CDS
AAGCATATCATGTTTGATTG+AGG	0.467490	4.4:+74959915	None:intergenic
GACAATTCATTTGTTGCTGA+TGG	0.472057	4.4:-74959652	MS.gene059269:CDS
TGGACTCTGATGATGGTGTT+AGG	0.480605	4.4:-74960143	MS.gene059269:CDS
GTGCCAACACGTTGAGCAGC+AGG	0.483402	4.4:+74960099	None:intergenic
TAACGGATCAGTAACATCAA+TGG	0.488291	4.4:+74960302	None:intergenic
CAATTCATTTGTTGCTGATG+GGG	0.489906	4.4:-74959650	MS.gene059269:CDS
TCATACAGACAAGGTGTGCC+AGG	0.492374	4.4:-74960178	MS.gene059269:CDS
GTGCCAGGAGCTGTATGAAT+TGG	0.505407	4.4:-74960163	MS.gene059269:CDS
GCGACATAGTTGCAGGGATA+GGG	0.506820	4.4:+74960049	None:intergenic
ACAATTCATTTGTTGCTGAT+GGG	0.506833	4.4:-74959651	MS.gene059269:CDS
GTACATGTACTGGTCTATAT+GGG	0.511561	4.4:-74959861	MS.gene059269:CDS
GCCAAGCACCACATGTCGGT+TGG	0.511911	4.4:+74959783	None:intergenic
GAAGAAAAGGAAACGGATGC+TGG	0.515278	4.4:-74959689	MS.gene059269:CDS
CTGAATTGAAGAAAAGGAAA+CGG	0.519643	4.4:-74959696	MS.gene059269:CDS
AGTCCAATTCATACAGCTCC+TGG	0.522005	4.4:+74960160	None:intergenic
ATGAATTGTCAACATTCTGA+AGG	0.522547	4.4:+74959665	None:intergenic
TATGAATTGGACTCTGATGA+TGG	0.543306	4.4:-74960150	MS.gene059269:CDS
AAGCCTGCTGCTCAACGTGT+TGG	0.554604	4.4:-74960102	MS.gene059269:CDS
ATTAAAATTCGGCACAGTGT+CGG	0.557984	4.4:+74959969	None:intergenic
TGCGACATAGTTGCAGGGAT+AGG	0.562822	4.4:+74960048	None:intergenic
CATCAAAACAACACTACTGA+TGG	0.565999	4.4:-74960027	MS.gene059269:CDS
TAGGACCTGATGTTAGTCAT+GGG	0.567876	4.4:-74959609	MS.gene059269:CDS
TGTCACAGGTGTGGACTGAT+CGG	0.574284	4.4:-74960201	MS.gene059269:intron
CACTTATATGCGCATCAAAG+TGG	0.574766	4.4:-74960325	None:intergenic
ATAGGACCTGATGTTAGTCA+TGG	0.592916	4.4:-74959610	MS.gene059269:CDS
CAAAACAACACTACTGATGG+TGG	0.600050	4.4:-74960024	MS.gene059269:CDS
GATGATGGTGTTAGGAATTG+GGG	0.601084	4.4:-74960135	MS.gene059269:CDS
GTGTGAAAGAGACAGCTAGT+AGG	0.603076	4.4:+74959761	None:intergenic
TCACATGATGACACAGACAC+TGG	0.610799	4.4:-74959721	MS.gene059269:CDS
TGAATTGTCAACATTCTGAA+GGG	0.627752	4.4:+74959666	None:intergenic
TTTGATGCGACATAGTTGCA+GGG	0.627931	4.4:+74960043	None:intergenic
CTTGCTGCCCAACCGACATG+TGG	0.637374	4.4:-74959791	MS.gene059269:CDS
AGGACCTGATGTTAGTCATG+GGG	0.649618	4.4:-74959608	MS.gene059269:CDS
GTGCCTAAAGTAGTCACGTG+TGG	0.651126	4.4:+74959991	None:intergenic
GGACCTGATGTTAGTCATGG+GGG	0.653439	4.4:-74959607	MS.gene059269:CDS
GAGTTGCCTGTTGAAGAAGA+AGG	0.654333	4.4:+74959823	None:intergenic
GCACTGTTGCAACAAATCGA+TGG	0.661776	4.4:-74960080	MS.gene059269:CDS
GACCTGATGTTAGTCATGGG+GGG	0.672812	4.4:-74959606	MS.gene059269:CDS
GTAGGCCAAGCACCACATGT+CGG	0.685277	4.4:+74959779	None:intergenic
ACTGATCGGTCATACAGACA+AGG	0.728300	4.4:-74960187	MS.gene059269:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AAGCATATCATGTTTGATTG+AGG	+	chr4.4:74960006-74960025	None:intergenic	30.0%
	AGCATCCTGTCATTAAAATT+CGG	+	chr4.4:74959963-74959982	None:intergenic	30.0%
	ATGAATTGTCAACATTCTGA+AGG	+	chr4.4:74960256-74960275	None:intergenic	30.0%
	CTGAATTGAAGAAAAGGAAA+CGG	-	chr4.4:74960222-74960241	MS.gene059269:intron	30.0%
	GATTTGGGAAACAATGTAAT+AGG	-	chr4.4:74960290-74960309	MS.gene059269:intron	30.0%
	TGAATTGTCAACATTCTGAA+GGG	+	chr4.4:74960255-74960274	None:intergenic	30.0%
	TGTTACTGATCCGTTAAAAA+AGG	-	chr4.4:74959623-74959642	MS.gene059269:CDS	30.0%
!	ACAATTCATTTGTTGCTGAT+GGG	-	chr4.4:74960267-74960286	MS.gene059269:intron	30.0%
!!!	ACACACCATTCCTTTTTTAA+CGG	+	chr4.4:74959636-74959655	None:intergenic	30.0%
!!!	ACATGTACCTTGTTTTTCTT+TGG	+	chr4.4:74960045-74960064	None:intergenic	30.0%
	AACACTGCCAAAGAAAAACA+AGG	-	chr4.4:74960035-74960054	MS.gene059269:CDS	35.0%
	ATTAAAATTCGGCACAGTGT+CGG	+	chr4.4:74959952-74959971	None:intergenic	35.0%
	CATCAAAACAACACTACTGA+TGG	-	chr4.4:74959891-74959910	MS.gene059269:CDS	35.0%
	CTGATCCGTTAAAAAAGGAA+TGG	-	chr4.4:74959628-74959647	MS.gene059269:CDS	35.0%
	GAAAAACAAGGTACATGTAC+TGG	-	chr4.4:74960047-74960066	MS.gene059269:CDS	35.0%
	TATGAATTGGACTCTGATGA+TGG	-	chr4.4:74959768-74959787	MS.gene059269:CDS	35.0%
!	CAATTCATTTGTTGCTGATG+GGG	-	chr4.4:74960268-74960287	MS.gene059269:intron	35.0%
!	GACAATTCATTTGTTGCTGA+TGG	-	chr4.4:74960266-74960285	MS.gene059269:intron	35.0%
!	GTACATGTACTGGTCTATAT+GGG	-	chr4.4:74960057-74960076	MS.gene059269:CDS	35.0%
!	TAACGGATCAGTAACATCAA+TGG	+	chr4.4:74959619-74959638	None:intergenic	35.0%
!!	CTGGTTCTGAATTGAAGAAA+AGG	-	chr4.4:74960216-74960235	MS.gene059269:intron	35.0%
!!	TGATGATGGTGTTAGGAATT+GGG	-	chr4.4:74959782-74959801	MS.gene059269:CDS	35.0%
	ATAGGACCTGATGTTAGTCA+TGG	-	chr4.4:74960308-74960327	MS.gene059269:CDS	40.0%
	CAAAACAACACTACTGATGG+TGG	-	chr4.4:74959894-74959913	MS.gene059269:CDS	40.0%
	CAAAAGAACCATTGCTAGCA+CGG	+	chr4.4:74959659-74959678	None:intergenic	40.0%
	CTGTCTCTTTCACACATGTT+GGG	-	chr4.4:74960165-74960184	MS.gene059269:CDS	40.0%
	TAGGACCTGATGTTAGTCAT+GGG	-	chr4.4:74960309-74960328	MS.gene059269:CDS	40.0%
	TGATTGAGGTTATCTGAGTC+TGG	+	chr4.4:74959992-74960011	None:intergenic	40.0%
	TTTCTGCCTTCTTCTTCAAC+AGG	-	chr4.4:74960089-74960108	MS.gene059269:CDS	40.0%
	TTTGATGCGACATAGTTGCA+GGG	+	chr4.4:74959878-74959897	None:intergenic	40.0%
	TTTGTTGCTGATGGGGATTT+GGG	-	chr4.4:74960275-74960294	MS.gene059269:intron	40.0%
!	AATTGGGTGTTTTCTGTCAC+AGG	-	chr4.4:74959703-74959722	MS.gene059269:CDS	40.0%
!	ATTTGTTGCTGATGGGGATT+TGG	-	chr4.4:74960274-74960293	MS.gene059269:intron	40.0%
!	GATGATGGTGTTAGGAATTG+GGG	-	chr4.4:74959783-74959802	MS.gene059269:CDS	40.0%
!	GGTACATGTACTGGTCTATA+TGG	-	chr4.4:74960056-74960075	MS.gene059269:CDS	40.0%
!	GTTTTTCTTTGGCAGTGTTC+TGG	+	chr4.4:74960034-74960053	None:intergenic	40.0%
!	TTTTGATGCGACATAGTTGC+AGG	+	chr4.4:74959879-74959898	None:intergenic	40.0%
!!	CTGATGATGGTGTTAGGAAT+TGG	-	chr4.4:74959781-74959800	MS.gene059269:CDS	40.0%
!!	CTGTGCCGAATTTTAATGAC+AGG	-	chr4.4:74959955-74959974	MS.gene059269:CDS	40.0%
	ACTGATCGGTCATACAGACA+AGG	-	chr4.4:74959731-74959750	MS.gene059269:CDS	45.0%
	AGGACCTGATGTTAGTCATG+GGG	-	chr4.4:74960310-74960329	MS.gene059269:CDS	45.0%
	AGTCCAATTCATACAGCTCC+TGG	+	chr4.4:74959761-74959780	None:intergenic	45.0%
	GAAGAAAAGGAAACGGATGC+TGG	-	chr4.4:74960229-74960248	MS.gene059269:intron	45.0%
	GAGTTGCCTGTTGAAGAAGA+AGG	+	chr4.4:74960098-74960117	None:intergenic	45.0%
	GCACTGTTGCAACAAATCGA+TGG	-	chr4.4:74959838-74959857	MS.gene059269:CDS	45.0%
	GCTGTCTCTTTCACACATGT+TGG	-	chr4.4:74960164-74960183	MS.gene059269:CDS	45.0%
	GTGTGAAAGAGACAGCTAGT+AGG	+	chr4.4:74960160-74960179	None:intergenic	45.0%
	TCACATGATGACACAGACAC+TGG	-	chr4.4:74960197-74960216	MS.gene059269:intron	45.0%
!!	TGGACTCTGATGATGGTGTT+AGG	-	chr4.4:74959775-74959794	MS.gene059269:CDS	45.0%
!!!	AATTTTAAATATGAAAAATT+GGG	-	chr4.4:74959687-74959706	MS.gene059269:CDS	5.0%
!!!	TAATTTTAAATATGAAAAAT+TGG	-	chr4.4:74959686-74959705	MS.gene059269:CDS	5.0%
	ATCCCCCCATGACTAACATC+AGG	+	chr4.4:74960317-74960336	None:intergenic	50.0%
	GACCTGATGTTAGTCATGGG+GGG	-	chr4.4:74960312-74960331	MS.gene059269:CDS	50.0%
	GCGACATAGTTGCAGGGATA+GGG	+	chr4.4:74959872-74959891	None:intergenic	50.0%
	GCTCCACACGTGACTACTTT+AGG	-	chr4.4:74959924-74959943	MS.gene059269:CDS	50.0%
	GGACCTGATGTTAGTCATGG+GGG	-	chr4.4:74960311-74960330	MS.gene059269:CDS	50.0%
	GTGCCAGGAGCTGTATGAAT+TGG	-	chr4.4:74959755-74959774	MS.gene059269:CDS	50.0%
	GTGCCTAAAGTAGTCACGTG+TGG	+	chr4.4:74959930-74959949	None:intergenic	50.0%
	TCATACAGACAAGGTGTGCC+AGG	-	chr4.4:74959740-74959759	MS.gene059269:CDS	50.0%
	TGCGACATAGTTGCAGGGAT+AGG	+	chr4.4:74959873-74959892	None:intergenic	50.0%
!	GGTGTTTTCTGTCACAGGTG+TGG	-	chr4.4:74959708-74959727	MS.gene059269:CDS	50.0%
!	TGTCACAGGTGTGGACTGAT+CGG	-	chr4.4:74959717-74959736	MS.gene059269:CDS	50.0%
	AAGCCTGCTGCTCAACGTGT+TGG	-	chr4.4:74959816-74959835	MS.gene059269:CDS	55.0%
	GTAGGCCAAGCACCACATGT+CGG	+	chr4.4:74960142-74960161	None:intergenic	55.0%
	TGGTGTGTCCGTGCTAGCAA+TGG	-	chr4.4:74959648-74959667	MS.gene059269:CDS	55.0%
!	CCAAGCACCACATGTCGGTT+GGG	+	chr4.4:74960137-74960156	None:intergenic	55.0%
	CCCAACCGACATGTGGTGCT+TGG	-	chr4.4:74960134-74960153	MS.gene059269:CDS	60.0%
	CTTGCTGCCCAACCGACATG+TGG	-	chr4.4:74960127-74960146	MS.gene059269:CDS	60.0%
	GCCAAGCACCACATGTCGGT+TGG	+	chr4.4:74960138-74960157	None:intergenic	60.0%
	GTGCCAACACGTTGAGCAGC+AGG	+	chr4.4:74959822-74959841	None:intergenic	60.0%
!	ATGTCGGTTGGGCAGCAAGC+TGG	+	chr4.4:74960126-74960145	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	74959600	74960340	74959600	ID=MS.gene059269
chr4.4	mRNA	74959600	74960340	74959600	ID=MS.gene059269.t1;Parent=MS.gene059269
chr4.4	exon	74960291	74960340	74960291	ID=MS.gene059269.t1.exon1;Parent=MS.gene059269.t1
chr4.4	CDS	74960291	74960340	74960291	ID=cds.MS.gene059269.t1;Parent=MS.gene059269.t1
chr4.4	exon	74959600	74960215	74959600	ID=MS.gene059269.t1.exon2;Parent=MS.gene059269.t1
chr4.4	CDS	74959600	74960215	74959600	ID=cds.MS.gene059269.t1;Parent=MS.gene059269.t1

Gene Sequence

>MS.gene059269

ATGCGCATCAAAGTGGCCATTGATGTTACTGATCCGTTAAAAAAGGAATGGTGTGTCCGTGCTAGCAATGGTTCTTTTGTGACTGTTAATTTTAAATATGAAAAATTGGGTGTTTTCTGTCACAGGTGTGGACTGATCGGTCATACAGACAAGGTGTGCCAGGAGCTGTATGAATTGGACTCTGATGATGGTGTTAGGAATTGGGGTGTTTATTTGAAGCCTGCTGCTCAACGTGTTGGCACTGTTGCAACAAATCGATGGCTGCAAGACCCTATCCCTGCAACTATGTCGCATCAAAACAACACTACTGATGGTGGTTTTGCTGCTCCACACGTGACTACTTTAGGCACCGACACTGTGCCGAATTTTAATGACAGGATGCTTGTTGTCCAGACTCAGATAACCTCAATCAAACATGATATGCTTGCTGTCCAGAACACTGCCAAAGAAAAACAAGGTACATGTACTGGTCTATATGGGCAAATGCACTTTCTGCCTTCTTCTTCAACAGGCAACTCGATCTCCAGCTTGCTGCCCAACCGACATGTGGTGCTTGGCCTACTAGCTGTCTCTTTCACACATGTTGGGTGTGATGAATCACATGATGACACAGACACTGGTTCTGAATTGAAGAAAAGGAAACGGATGCTGGCCCTTCAGAATGTTGACAATTCATTTGTTGCTGATGGGGATTTGGGAAACAATGTAATAGGACCTGATGTTAGTCATGGGGGGATGTAG

Protein sequence

>MS.gene059269.t1

MRIKVAIDVTDPLKKEWCGLIGHTDKVCQELYELDSDDGVRNWGVYLKPAAQRVGTVATNRWLQDPIPATMSHQNNTTDGGFAAPHVTTLGTDTVPNFNDRMLVVQTQITSIKHDMLAVQNTAKEKQGTCTGLYGQMHFLPSSSTGNSISSLLPNRHVVLGLLAVSFTHVGCDESHDDTDTGSELKKRKRMLALQNVDNSFVADGDLGNNVIGPDVSHGGM