Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27329.t1 | AES70414.1 | 59.9 | 347 | 71 | 4 | 1 | 346 | 1 | 280 | 4.90E-104 | 388.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27329.t1 | O04244 | 27.9 | 136 | 94 | 2 | 83 | 216 | 6 | 139 | 4.2e-11 | 70.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27329.t1 | G7J017 | 59.9 | 347 | 71 | 4 | 1 | 346 | 1 | 280 | 3.5e-104 | 388.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27329.t1 | MTR_3g053920 | 59.942 | 347 | 71 | 4 | 1 | 346 | 1 | 280 | 4.24e-133 | 385 |
MS.gene27329.t1 | MTR_2g061500 | 87.597 | 129 | 16 | 0 | 1 | 129 | 1 | 129 | 4.19e-79 | 241 |
MS.gene27329.t1 | MTR_4g103530 | 84.211 | 95 | 15 | 0 | 55 | 149 | 1 | 95 | 7.23e-55 | 181 |
MS.gene27329.t1 | MTR_7g011710 | 68.235 | 85 | 27 | 0 | 55 | 139 | 1 | 85 | 5.28e-37 | 133 |
MS.gene27329.t1 | MTR_6g033215 | 35.260 | 173 | 110 | 1 | 29 | 199 | 122 | 294 | 1.58e-34 | 130 |
MS.gene27329.t1 | MTR_0010s0370 | 36.158 | 177 | 103 | 3 | 8 | 177 | 4 | 177 | 7.05e-31 | 117 |
MS.gene27329.t1 | MTR_0010s0350 | 36.158 | 177 | 103 | 3 | 8 | 177 | 4 | 177 | 7.05e-31 | 117 |
MS.gene27329.t1 | MTR_8g463110 | 58.475 | 118 | 47 | 1 | 289 | 404 | 1 | 118 | 2.26e-28 | 118 |
MS.gene27329.t1 | MTR_1g036720 | 33.010 | 103 | 69 | 0 | 11 | 113 | 9 | 111 | 6.45e-13 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27329.t1 | AT2G17920 | 25.806 | 217 | 147 | 6 | 8 | 216 | 9 | 219 | 4.03e-17 | 82.4 |
MS.gene27329.t1 | AT3G57587 | 28.169 | 142 | 98 | 2 | 77 | 216 | 80 | 219 | 1.21e-15 | 78.6 |
MS.gene27329.t1 | AT3G31430 | 28.230 | 209 | 142 | 5 | 11 | 215 | 107 | 311 | 1.60e-15 | 77.8 |
MS.gene27329.t1 | AT5G36228 | 27.179 | 195 | 134 | 4 | 36 | 226 | 39 | 229 | 2.27e-15 | 77.8 |
MS.gene27329.t1 | AT2G41590 | 23.715 | 253 | 159 | 7 | 77 | 314 | 80 | 313 | 3.71e-15 | 77.0 |
MS.gene27329.t1 | AT2G13450 | 26.776 | 183 | 128 | 4 | 36 | 215 | 39 | 218 | 7.21e-15 | 76.6 |
MS.gene27329.t1 | AT2G02103 | 25.683 | 183 | 132 | 2 | 36 | 216 | 39 | 219 | 4.29e-13 | 71.2 |
MS.gene27329.t1 | AT5G25200 | 25.137 | 183 | 133 | 2 | 36 | 216 | 39 | 219 | 4.32e-13 | 70.9 |
MS.gene27329.t1 | AT5G18636 | 25.137 | 183 | 133 | 2 | 36 | 216 | 39 | 219 | 4.48e-13 | 70.9 |
MS.gene27329.t1 | AT4G02000 | 27.941 | 136 | 94 | 2 | 83 | 216 | 6 | 139 | 4.60e-13 | 70.1 |
MS.gene27329.t1 | AT3G47920 | 29.371 | 143 | 95 | 3 | 77 | 216 | 9 | 148 | 7.08e-13 | 69.7 |
Find 123 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCAACCTTATGGTGAAAT+TGG | 0.236408 | 1.2:-2569449 | None:intergenic |
AGACATACGCTCGCTGAAAT+AGG | 0.266771 | 1.2:-2569364 | None:intergenic |
ATTTGCTGCTGATGGGACTA+TGG | 0.293562 | 1.2:+2570370 | MS.gene27329:CDS |
CAGGTCCATGGTTTACCATT+TGG | 0.298080 | 1.2:+2569591 | MS.gene27329:CDS |
AAGCCTTCATCTCAAAGAAT+TGG | 0.310102 | 1.2:+2569921 | MS.gene27329:CDS |
CCTAAGGTAGGTCAAGGTAT+AGG | 0.317348 | 1.2:+2569624 | MS.gene27329:CDS |
ACTATGGGAAATGTTGTAAT+AGG | 0.326076 | 1.2:+2570386 | MS.gene27329:CDS |
TCATATCGAGTTCTGGATTC+AGG | 0.340405 | 1.2:+2569572 | MS.gene27329:CDS |
TCGTAGCGAAAATGACGTTT+AGG | 0.342945 | 1.2:-2571234 | None:intergenic |
AGGTGAGACCGTCAAGATTC+AGG | 0.350710 | 1.2:-2569233 | None:intergenic |
CGTTGAATCATATCGAGTTC+TGG | 0.362336 | 1.2:+2569565 | MS.gene27329:CDS |
CTGATGATGGAGTCCGTAGA+TGG | 0.370425 | 1.2:+2569886 | MS.gene27329:CDS |
GTTCCAATTCTTTGAGATGA+AGG | 0.382349 | 1.2:-2569924 | None:intergenic |
GCAGTGTTAGCGCGAGCAGC+AGG | 0.384484 | 1.2:-2570023 | None:intergenic |
CCTGACCGTCCATTGGTGCT+TGG | 0.385983 | 1.2:+2570239 | MS.gene27329:CDS |
GCTTGGATTACCTGCTGTTC+CGG | 0.391686 | 1.2:+2570256 | MS.gene27329:CDS |
CTAAGGTAGGTCAAGGTATA+GGG | 0.394084 | 1.2:+2569625 | MS.gene27329:CDS |
TGTCACAGGTGTGGACTGTT+GGG | 0.400708 | 1.2:+2569822 | MS.gene27329:CDS |
TAGCTCTTACATGAGACTTA+AGG | 0.402604 | 1.2:+2569695 | MS.gene27329:CDS |
CACGGGCAGCATCAACCTTA+TGG | 0.405332 | 1.2:-2569458 | None:intergenic |
CTTGTTCCAATTTCACCATA+AGG | 0.405419 | 1.2:+2569443 | MS.gene27329:CDS |
GATTCAAGCTCGAACAAGTC+TGG | 0.410982 | 1.2:-2569864 | None:intergenic |
TGATTCAACGGGACAAAACT+TGG | 0.415783 | 1.2:-2569552 | None:intergenic |
TGCTGCCCAAAATGCTGTCT+TGG | 0.423355 | 1.2:+2570130 | MS.gene27329:CDS |
TTGGAACAGCTGCTACTAAC+AGG | 0.423746 | 1.2:+2569940 | MS.gene27329:CDS |
GGTGCAACATTGACAAGAAT+AGG | 0.430171 | 1.2:-2571192 | None:intergenic |
GTAGCGATCAGCAACAGATT+TGG | 0.441459 | 1.2:-2569421 | None:intergenic |
TGGCGTGTTCGTGCTACTAA+TGG | 0.442394 | 1.2:+2569753 | MS.gene27329:CDS |
TGCTTGGAAGCCAGGCAAAA+AGG | 0.446090 | 1.2:+2569389 | MS.gene27329:CDS |
CCTATACCTTGACCTACCTT+AGG | 0.447996 | 1.2:-2569624 | None:intergenic |
ACAAAACTTGGGACGACACC+AGG | 0.448728 | 1.2:-2569540 | None:intergenic |
TGAGATGAAGGCTTTAAATA+CGG | 0.453298 | 1.2:-2569912 | None:intergenic |
ATGTCTCGTGCTTGGAAGCC+AGG | 0.453399 | 1.2:+2569381 | MS.gene27329:CDS |
GACCTATGAGACAGTGTTCA+AGG | 0.454398 | 1.2:-2569311 | None:intergenic |
TTGTCACAGGTGTGGACTGT+TGG | 0.459654 | 1.2:+2569821 | MS.gene27329:CDS |
GTCCTTGAACACTGTCTCAT+AGG | 0.463466 | 1.2:+2569309 | MS.gene27329:CDS |
CCAAGCACCAATGGACGGTC+AGG | 0.469030 | 1.2:-2570239 | None:intergenic |
TGCGGCCATCATAAGCTTTG+AGG | 0.469996 | 1.2:-2569662 | None:intergenic |
GCTGCCCGTGTTCTTGATGA+AGG | 0.477877 | 1.2:+2569471 | MS.gene27329:CDS |
AGAACTCGATATGATTCAAC+GGG | 0.480591 | 1.2:-2569563 | None:intergenic |
TGCGACATAGAGACAGGAAT+AGG | 0.483601 | 1.2:-2569975 | None:intergenic |
CTGGTTCAGACTCAAGGTTA+AGG | 0.485928 | 1.2:-2569275 | None:intergenic |
TTCCTCTTGTATCTCAGCAT+CGG | 0.486377 | 1.2:-2570291 | None:intergenic |
TTCGAGCTTGAATCTGATGA+TGG | 0.494215 | 1.2:+2569873 | MS.gene27329:CDS |
GCGACATAGAGACAGGAATA+GGG | 0.498636 | 1.2:-2569974 | None:intergenic |
TGTTGTACCTGTGGAGGAAG+AGG | 0.502378 | 1.2:-2570201 | None:intergenic |
GTGGTTCGGATTTGAAGAAA+AGG | 0.503559 | 1.2:+2570315 | MS.gene27329:CDS |
TCAGTTGAAACCGGAACAGC+AGG | 0.506727 | 1.2:-2570266 | None:intergenic |
CTGCTGCCCTCTTCCTCCAC+AGG | 0.506951 | 1.2:+2570194 | MS.gene27329:CDS |
GGACGACACCAGGGGAAATA+CGG | 0.507266 | 1.2:-2569530 | None:intergenic |
GAATTATCATTTGCTGCTGA+TGG | 0.507568 | 1.2:+2570362 | MS.gene27329:CDS |
GCGGCCATCATAAGCTTTGA+GGG | 0.507959 | 1.2:-2569661 | None:intergenic |
GTTATGGACCGTATTTCCCC+TGG | 0.508743 | 1.2:+2569522 | MS.gene27329:CDS |
CCCACCAACCTGAATCTTGA+CGG | 0.509838 | 1.2:+2569225 | MS.gene27329:CDS |
GCATCGGATTCAGTTGAAAC+CGG | 0.511179 | 1.2:-2570275 | None:intergenic |
GAAGAAAAGGAAGCGTATGT+TGG | 0.516569 | 1.2:+2570328 | MS.gene27329:CDS |
TTAGGTTGAATGAAACCAAA+TGG | 0.516817 | 1.2:-2569606 | None:intergenic |
CTGTCTCATAGGTCGAGTCC+TGG | 0.520328 | 1.2:+2569320 | MS.gene27329:CDS |
TTAAATACGGTCCCCATCTA+CGG | 0.521489 | 1.2:-2569899 | None:intergenic |
GTGCAACATTGACAAGAATA+GGG | 0.522667 | 1.2:-2571191 | None:intergenic |
TAGGATCCAATGTTAGTCAT+GGG | 0.524354 | 1.2:+2570405 | MS.gene27329:CDS |
ACCGTCAAGATTCAGGTTGG+TGG | 0.526969 | 1.2:-2569226 | None:intergenic |
ATTTGGTTTCATTCAACCTA+AGG | 0.529018 | 1.2:+2569608 | MS.gene27329:CDS |
TGATGATGGAGTCCGTAGAT+GGG | 0.531244 | 1.2:+2569887 | MS.gene27329:CDS |
GCAGCAGCATTGAGAGGAGA+TGG | 0.536233 | 1.2:-2569999 | None:intergenic |
GATACAAGAGGAAAGTGGTT+CGG | 0.537665 | 1.2:+2570301 | MS.gene27329:CDS |
GCGAGCGTATGTCTCGTGCT+TGG | 0.539091 | 1.2:+2569373 | MS.gene27329:CDS |
TATGCTTCCTGACCGTCCAT+TGG | 0.539434 | 1.2:+2570232 | MS.gene27329:CDS |
GCTCGCGCTAACACTGCTGA+AGG | 0.542242 | 1.2:+2570029 | MS.gene27329:CDS |
GATGGCTGCGACATAGAGAC+AGG | 0.549076 | 1.2:-2569981 | None:intergenic |
GTGTTCTTGATGAAGGGCCA+TGG | 0.550277 | 1.2:+2569478 | MS.gene27329:CDS |
ACACGCCACTCTTGTTTCAA+AGG | 0.552730 | 1.2:-2569738 | None:intergenic |
TTTGCTGCTGATGGGACTAT+GGG | 0.553250 | 1.2:+2570371 | MS.gene27329:CDS |
AATTATCATTTGCTGCTGAT+GGG | 0.554940 | 1.2:+2570363 | MS.gene27329:CDS |
GGTACCCTCAAAGCTTATGA+TGG | 0.559787 | 1.2:+2569657 | MS.gene27329:CDS |
ATAGGGTAATGATCGGAAGC+AGG | 0.563188 | 1.2:-2571174 | None:intergenic |
ATAGGATCCAATGTTAGTCA+TGG | 0.563340 | 1.2:+2570404 | MS.gene27329:CDS |
CCGTCAAGATTCAGGTTGGT+GGG | 0.564705 | 1.2:-2569225 | None:intergenic |
ATTGAATCTCGCGATCAGCC+AGG | 0.565008 | 1.2:-2569338 | None:intergenic |
GGTTTCATTCAACCTAAGGT+AGG | 0.570176 | 1.2:+2569612 | MS.gene27329:CDS |
GAGTTCTGGATTCAGGTCCA+TGG | 0.571214 | 1.2:+2569579 | MS.gene27329:CDS |
GTCACAGGTGTGGACTGTTG+GGG | 0.571487 | 1.2:+2569823 | MS.gene27329:CDS |
ATTCAACCTAAGGTAGGTCA+AGG | 0.576603 | 1.2:+2569618 | MS.gene27329:CDS |
GACAAGAATAGGGTAATGAT+CGG | 0.586157 | 1.2:-2571181 | None:intergenic |
GGAATCTGTAGCCGAGGTGT+AGG | 0.588697 | 1.2:-2571213 | None:intergenic |
GCAGGAGCAGCAGCATTGAG+AGG | 0.588766 | 1.2:-2570005 | None:intergenic |
GATTCAACGGGACAAAACTT+GGG | 0.588972 | 1.2:-2569551 | None:intergenic |
GGTCTCACCTTGTCTGAGGA+AGG | 0.589254 | 1.2:+2569246 | MS.gene27329:CDS |
GCTAACACTGCTGAAGGCAA+TGG | 0.591118 | 1.2:+2570035 | MS.gene27329:CDS |
GTTGTACCTGTGGAGGAAGA+GGG | 0.604958 | 1.2:-2570200 | None:intergenic |
TGACGGTCTCACCTTGTCTG+AGG | 0.605230 | 1.2:+2569242 | MS.gene27329:CDS |
ATCCGATGCTGAGATACAAG+AGG | 0.608784 | 1.2:+2570289 | MS.gene27329:CDS |
TCTCATGTAAGAGCTATGAA+TGG | 0.614120 | 1.2:-2569688 | None:intergenic |
TGAAACCAAATGGTAAACCA+TGG | 0.615949 | 1.2:-2569596 | None:intergenic |
ACTAGAGGCTGTTGTACCTG+TGG | 0.616012 | 1.2:-2570210 | None:intergenic |
ATGGCCCTTCATCAAGAACA+CGG | 0.617686 | 1.2:-2569476 | None:intergenic |
CAGAACTCGATATGATTCAA+CGG | 0.618989 | 1.2:-2569564 | None:intergenic |
ATCCAATGTTAGTCATGGGG+GGG | 0.619233 | 1.2:+2570409 | MS.gene27329:CDS |
CTGTTCCTTTGAAACAAGAG+TGG | 0.620170 | 1.2:+2569733 | MS.gene27329:CDS |
TGAAAATTATCATAAAGCCA+TGG | 0.620312 | 1.2:-2569495 | None:intergenic |
CGTTTAGGAATCTGTAGCCG+AGG | 0.623630 | 1.2:-2571219 | None:intergenic |
GATGATGGAGTCCGTAGATG+GGG | 0.623710 | 1.2:+2569888 | MS.gene27329:CDS |
GACGAGACCTTCCTCAGACA+AGG | 0.633356 | 1.2:-2569253 | None:intergenic |
GCAGGTAATCCAAGCACCAA+TGG | 0.634137 | 1.2:-2570248 | None:intergenic |
GCTGAGATACAAGAGGAAAG+TGG | 0.644430 | 1.2:+2570296 | MS.gene27329:CDS |
AGAGGCTGTTGTACCTGTGG+AGG | 0.646083 | 1.2:-2570207 | None:intergenic |
CTGCCCGTGTTCTTGATGAA+GGG | 0.649758 | 1.2:+2569472 | MS.gene27329:CDS |
GAGACCGTCAAGATTCAGGT+TGG | 0.650330 | 1.2:-2569229 | None:intergenic |
TGGCCCTTCATCAAGAACAC+GGG | 0.651409 | 1.2:-2569475 | None:intergenic |
CAAAACTTGGGACGACACCA+GGG | 0.654153 | 1.2:-2569539 | None:intergenic |
CAAATGATAATTCATTCTGA+CGG | 0.654253 | 1.2:-2570352 | None:intergenic |
GGATCCAATGTTAGTCATGG+GGG | 0.659002 | 1.2:+2570407 | MS.gene27329:CDS |
TGCTACTGTTGAGACTCTTG+TGG | 0.660371 | 1.2:+2571149 | MS.gene27329:intron |
AGGATCCAATGTTAGTCATG+GGG | 0.661132 | 1.2:+2570406 | MS.gene27329:CDS |
GTAATCCAAGCACCAATGGA+CGG | 0.661163 | 1.2:-2570244 | None:intergenic |
GATCCAATGTTAGTCATGGG+GGG | 0.669698 | 1.2:+2570408 | MS.gene27329:CDS |
TCAATGTTGCACCTACACCT+CGG | 0.673718 | 1.2:+2571202 | MS.gene27329:CDS |
AAGAGCTATGAATGGTGTTG+CGG | 0.687030 | 1.2:-2569680 | None:intergenic |
AAAACTTGGGACGACACCAG+GGG | 0.689747 | 1.2:-2569538 | None:intergenic |
GAACAGCTGCTACTAACAGG+TGG | 0.694349 | 1.2:+2569943 | MS.gene27329:CDS |
ACGGTCAGGAAGCATACTAG+AGG | 0.695277 | 1.2:-2570225 | None:intergenic |
GAGACTGAAAAGCCATCATG+CGG | 0.695467 | 1.2:-2570079 | None:intergenic |
ACTGTTGGGGCATACTGACA+AGG | 0.735140 | 1.2:+2569836 | MS.gene27329:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGATAATTTTCATATTGTTA+TGG | + | chr1.2:2569506-2569525 | MS.gene27329:CDS | 15.0% |
!! | TAACAATTTCAACAGTAATA+TGG | - | chr1.2:2570777-2570796 | None:intergenic | 20.0% |
! | ACCTTTAAGTATGAAAAACT+TGG | + | chr1.2:2569792-2569811 | MS.gene27329:CDS | 25.0% |
! | AGATATCATTAAAATCTCCT+AGG | - | chr1.2:2570921-2570940 | None:intergenic | 25.0% |
! | CAAATGATAATTCATTCTGA+CGG | - | chr1.2:2570355-2570374 | None:intergenic | 25.0% |
! | GAAATTGTTAACAATACTCT+TGG | + | chr1.2:2570787-2570806 | MS.gene27329:intron | 25.0% |
! | TGAAAATTATCATAAAGCCA+TGG | - | chr1.2:2569498-2569517 | None:intergenic | 25.0% |
!! | ACCAAGTTTTTCATACTTAA+AGG | - | chr1.2:2569796-2569815 | None:intergenic | 25.0% |
!! | TTAACAATACTCTTGGTAAT+TGG | + | chr1.2:2570794-2570813 | MS.gene27329:intron | 25.0% |
!!! | GGAGTTCTTCAATTTTATTT+CGG | - | chr1.2:2570639-2570658 | None:intergenic | 25.0% |
AATCGTAACCAAGCAAAAAA+CGG | - | chr1.2:2570660-2570679 | None:intergenic | 30.0% | |
ACTATGGGAAATGTTGTAAT+AGG | + | chr1.2:2570386-2570405 | MS.gene27329:CDS | 30.0% | |
AGATGATGAACAAGTTGTAA+TGG | + | chr1.2:2570463-2570482 | MS.gene27329:intron | 30.0% | |
TACACTTGGTTTAAAAGTCT+TGG | + | chr1.2:2571054-2571073 | MS.gene27329:intron | 30.0% | |
TCACTTAGGAATAAAAGATC+CGG | - | chr1.2:2570604-2570623 | None:intergenic | 30.0% | |
! | AATTATCATTTGCTGCTGAT+GGG | + | chr1.2:2570363-2570382 | MS.gene27329:CDS | 30.0% |
! | ACAACTTGTTCATCATCTAT+AGG | - | chr1.2:2570461-2570480 | None:intergenic | 30.0% |
! | AGACTTTTAAACCAAGTGTA+CGG | - | chr1.2:2571054-2571073 | None:intergenic | 30.0% |
! | ATTTGGTTTCATTCAACCTA+AGG | + | chr1.2:2569608-2569627 | MS.gene27329:CDS | 30.0% |
! | CAACTTTCTTCTCAATTTTC+AGG | + | chr1.2:2570883-2570902 | MS.gene27329:intron | 30.0% |
!! | TGAGATGAAGGCTTTAAATA+CGG | - | chr1.2:2569915-2569934 | None:intergenic | 30.0% |
!! | TTAGGTTGAATGAAACCAAA+TGG | - | chr1.2:2569609-2569628 | None:intergenic | 30.0% |
!!! | AACTTGGTATTTTTTGTCAC+AGG | + | chr1.2:2569808-2569827 | MS.gene27329:CDS | 30.0% |
AAGCCTTCATCTCAAAGAAT+TGG | + | chr1.2:2569921-2569940 | MS.gene27329:CDS | 35.0% | |
AATGCTGTCTTGGCTAAAAA+AGG | + | chr1.2:2570140-2570159 | MS.gene27329:CDS | 35.0% | |
AGAACTCGATATGATTCAAC+GGG | - | chr1.2:2569566-2569585 | None:intergenic | 35.0% | |
ATAGGATCCAATGTTAGTCA+TGG | + | chr1.2:2570404-2570423 | MS.gene27329:CDS | 35.0% | |
ATTAGGATAGCCATAATAGC+CGG | - | chr1.2:2570827-2570846 | None:intergenic | 35.0% | |
CAGAACTCGATATGATTCAA+CGG | - | chr1.2:2569567-2569586 | None:intergenic | 35.0% | |
CATCAACCTTATGGTGAAAT+TGG | - | chr1.2:2569452-2569471 | None:intergenic | 35.0% | |
CTTAGATGCAAGTGAGAAAA+GGG | + | chr1.2:2570939-2570958 | MS.gene27329:intron | 35.0% | |
CTTGTTCCAATTTCACCATA+AGG | + | chr1.2:2569443-2569462 | MS.gene27329:CDS | 35.0% | |
GACAAGAATAGGGTAATGAT+CGG | - | chr1.2:2571184-2571203 | None:intergenic | 35.0% | |
GATGATATGTATGTAACTGC+TGG | + | chr1.2:2570434-2570453 | MS.gene27329:intron | 35.0% | |
GTCTTGGCTAAAAAAGGTAA+TGG | + | chr1.2:2570146-2570165 | MS.gene27329:CDS | 35.0% | |
GTGCAACATTGACAAGAATA+GGG | - | chr1.2:2571194-2571213 | None:intergenic | 35.0% | |
GTGCTCTTGCAAATGATTTA+TGG | + | chr1.2:2571109-2571128 | MS.gene27329:intron | 35.0% | |
TAGCTCTTACATGAGACTTA+AGG | + | chr1.2:2569695-2569714 | MS.gene27329:CDS | 35.0% | |
TAGGATCCAATGTTAGTCAT+GGG | + | chr1.2:2570405-2570424 | MS.gene27329:CDS | 35.0% | |
TATTATGGCTATCCTAATGG+AGG | + | chr1.2:2570829-2570848 | MS.gene27329:intron | 35.0% | |
TCTCATGTAAGAGCTATGAA+TGG | - | chr1.2:2569691-2569710 | None:intergenic | 35.0% | |
TCTTAGATGCAAGTGAGAAA+AGG | + | chr1.2:2570938-2570957 | MS.gene27329:intron | 35.0% | |
TGAAACCAAATGGTAAACCA+TGG | - | chr1.2:2569599-2569618 | None:intergenic | 35.0% | |
TTAGATGCAAGTGAGAAAAG+GGG | + | chr1.2:2570940-2570959 | MS.gene27329:intron | 35.0% | |
TTGTCGAAGAAAATTCCAAG+CGG | - | chr1.2:2570866-2570885 | None:intergenic | 35.0% | |
! | AAATTTTCATGACCGCATGA+TGG | + | chr1.2:2570067-2570086 | MS.gene27329:CDS | 35.0% |
! | GAATTATCATTTGCTGCTGA+TGG | + | chr1.2:2570362-2570381 | MS.gene27329:CDS | 35.0% |
! | TTTAGCCAAGACAGCATTTT+GGG | - | chr1.2:2570138-2570157 | None:intergenic | 35.0% |
! | TTTTAGCCAAGACAGCATTT+TGG | - | chr1.2:2570139-2570158 | None:intergenic | 35.0% |
!! | GTTCCAATTCTTTGAGATGA+AGG | - | chr1.2:2569927-2569946 | None:intergenic | 35.0% |
AAGCCATTGATAAGCCATTG+GGG | - | chr1.2:2570979-2570998 | None:intergenic | 40.0% | |
AGGATCCAATGTTAGTCATG+GGG | + | chr1.2:2570406-2570425 | MS.gene27329:CDS | 40.0% | |
ATTCAACCTAAGGTAGGTCA+AGG | + | chr1.2:2569618-2569637 | MS.gene27329:CDS | 40.0% | |
CCAAAATAAAGCTAAACCCC+CGG | - | chr1.2:2570713-2570732 | None:intergenic | 40.0% | |
CGTTGAATCATATCGAGTTC+TGG | + | chr1.2:2569565-2569584 | MS.gene27329:CDS | 40.0% | |
CTAAGGTAGGTCAAGGTATA+GGG | + | chr1.2:2569625-2569644 | MS.gene27329:CDS | 40.0% | |
GAAGCCATTGATAAGCCATT+GGG | - | chr1.2:2570980-2570999 | None:intergenic | 40.0% | |
GATACAAGAGGAAAGTGGTT+CGG | + | chr1.2:2570301-2570320 | MS.gene27329:CDS | 40.0% | |
GATGAACAAGTTGTAATGGC+AGG | + | chr1.2:2570467-2570486 | MS.gene27329:intron | 40.0% | |
GATTCAACGGGACAAAACTT+GGG | - | chr1.2:2569554-2569573 | None:intergenic | 40.0% | |
GGCTATTATGGCTATCCTAA+TGG | + | chr1.2:2570826-2570845 | MS.gene27329:intron | 40.0% | |
GGTGCAACATTGACAAGAAT+AGG | - | chr1.2:2571195-2571214 | None:intergenic | 40.0% | |
GGTTTCATTCAACCTAAGGT+AGG | + | chr1.2:2569612-2569631 | MS.gene27329:CDS | 40.0% | |
TCGTAGCGAAAATGACGTTT+AGG | - | chr1.2:2571237-2571256 | None:intergenic | 40.0% | |
TGATTCAACGGGACAAAACT+TGG | - | chr1.2:2569555-2569574 | None:intergenic | 40.0% | |
TTAAATACGGTCCCCATCTA+CGG | - | chr1.2:2569902-2569921 | None:intergenic | 40.0% | |
TTCCTCTTGTATCTCAGCAT+CGG | - | chr1.2:2570294-2570313 | None:intergenic | 40.0% | |
TTCGAGCTTGAATCTGATGA+TGG | + | chr1.2:2569873-2569892 | MS.gene27329:CDS | 40.0% | |
! | AAGAGCTATGAATGGTGTTG+CGG | - | chr1.2:2569683-2569702 | None:intergenic | 40.0% |
! | ATTTTCGCTACGAAAATGCG+TGG | + | chr1.2:2571244-2571263 | MS.gene27329:CDS | 40.0% |
! | CAAGGTATAGGGAGTTTTCT+AGG | + | chr1.2:2569636-2569655 | MS.gene27329:CDS | 40.0% |
! | GAAGAAAAGGAAGCGTATGT+TGG | + | chr1.2:2570328-2570347 | MS.gene27329:CDS | 40.0% |
! | GACGAAATTTAAGACCCCAA+TGG | + | chr1.2:2570962-2570981 | MS.gene27329:intron | 40.0% |
! | GTGGTTCGGATTTGAAGAAA+AGG | + | chr1.2:2570315-2570334 | MS.gene27329:CDS | 40.0% |
!! | CTGTTCCTTTGAAACAAGAG+TGG | + | chr1.2:2569733-2569752 | MS.gene27329:CDS | 40.0% |
!! | TCATATCGAGTTCTGGATTC+AGG | + | chr1.2:2569572-2569591 | MS.gene27329:CDS | 40.0% |
!!! | CATTTTCTGGTTCAGACTCA+AGG | - | chr1.2:2569284-2569303 | None:intergenic | 40.0% |
!!! | CTTCTCAATTTTCAGGTCCA+TGG | + | chr1.2:2570890-2570909 | MS.gene27329:intron | 40.0% |
!!! | GAAGAACTCCGTTTTTTGCT+TGG | + | chr1.2:2570649-2570668 | MS.gene27329:intron | 40.0% |
!!! | GGTATTTTTTGTCACAGGTG+TGG | + | chr1.2:2569813-2569832 | MS.gene27329:CDS | 40.0% |
AAAGATCCGGATTGAAGTGC+CGG | - | chr1.2:2570591-2570610 | None:intergenic | 45.0% | |
AAATCTCCTAGGATGCACCA+TGG | - | chr1.2:2570910-2570929 | None:intergenic | 45.0% | |
AGACATACGCTCGCTGAAAT+AGG | - | chr1.2:2569367-2569386 | None:intergenic | 45.0% | |
AGACCCCAATGGCTTATCAA+TGG | + | chr1.2:2570973-2570992 | MS.gene27329:intron | 45.0% | |
AGAGTCTCAACAGTAGCATG+CGG | - | chr1.2:2571147-2571166 | None:intergenic | 45.0% | |
AGTGTACGGATAACCTTCGA+CGG | - | chr1.2:2571040-2571059 | None:intergenic | 45.0% | |
ATAGGGTAATGATCGGAAGC+AGG | - | chr1.2:2571177-2571196 | None:intergenic | 45.0% | |
ATCCAATGTTAGTCATGGGG+GGG | + | chr1.2:2570409-2570428 | MS.gene27329:CDS | 45.0% | |
ATCCGATGCTGAGATACAAG+AGG | + | chr1.2:2570289-2570308 | MS.gene27329:CDS | 45.0% | |
ATGGCCCTTCATCAAGAACA+CGG | - | chr1.2:2569479-2569498 | None:intergenic | 45.0% | |
CAGGTCCATGGTTTACCATT+TGG | + | chr1.2:2569591-2569610 | MS.gene27329:CDS | 45.0% | |
CCGACCTTAAATACCTAGTC+CGG | + | chr1.2:2570569-2570588 | MS.gene27329:intron | 45.0% | |
CCTAAGGTAGGTCAAGGTAT+AGG | + | chr1.2:2569624-2569643 | MS.gene27329:CDS | 45.0% | |
CCTATACCTTGACCTACCTT+AGG | - | chr1.2:2569627-2569646 | None:intergenic | 45.0% | |
CTGAATCAAGAACCGCTTGA+CGG | - | chr1.2:2571002-2571021 | None:intergenic | 45.0% | |
CTGGTTCAGACTCAAGGTTA+AGG | - | chr1.2:2569278-2569297 | None:intergenic | 45.0% | |
GACCTATGAGACAGTGTTCA+AGG | - | chr1.2:2569314-2569333 | None:intergenic | 45.0% | |
GAGACTGAAAAGCCATCATG+CGG | - | chr1.2:2570082-2570101 | None:intergenic | 45.0% | |
GATCCAATGTTAGTCATGGG+GGG | + | chr1.2:2570408-2570427 | MS.gene27329:CDS | 45.0% | |
GATTCAAGCTCGAACAAGTC+TGG | - | chr1.2:2569867-2569886 | None:intergenic | 45.0% | |
GCATCGGATTCAGTTGAAAC+CGG | - | chr1.2:2570278-2570297 | None:intergenic | 45.0% | |
GCGACATAGAGACAGGAATA+GGG | - | chr1.2:2569977-2569996 | None:intergenic | 45.0% | |
GCTACTAGACTCATTCACCT+AGG | - | chr1.2:2570511-2570530 | None:intergenic | 45.0% | |
GCTGAGATACAAGAGGAAAG+TGG | + | chr1.2:2570296-2570315 | MS.gene27329:CDS | 45.0% | |
GGAAGCCATTGATAAGCCAT+TGG | - | chr1.2:2570981-2571000 | None:intergenic | 45.0% | |
GGATCCAATGTTAGTCATGG+GGG | + | chr1.2:2570407-2570426 | MS.gene27329:CDS | 45.0% | |
GGTACCCTCAAAGCTTATGA+TGG | + | chr1.2:2569657-2569676 | MS.gene27329:CDS | 45.0% | |
GGTGAATGAGTCTAGTAGCT+TGG | + | chr1.2:2570512-2570531 | MS.gene27329:intron | 45.0% | |
GTAATCCAAGCACCAATGGA+CGG | - | chr1.2:2570247-2570266 | None:intergenic | 45.0% | |
GTAGCGATCAGCAACAGATT+TGG | - | chr1.2:2569424-2569443 | None:intergenic | 45.0% | |
GTCCTTGAACACTGTCTCAT+AGG | + | chr1.2:2569309-2569328 | MS.gene27329:CDS | 45.0% | |
GTCTAGTAGCTTGGAATTGC+CGG | + | chr1.2:2570521-2570540 | MS.gene27329:intron | 45.0% | |
TATCAATGGCTTCCGTCAAG+CGG | + | chr1.2:2570987-2571006 | MS.gene27329:intron | 45.0% | |
TCAATGTTGCACCTACACCT+CGG | + | chr1.2:2571202-2571221 | MS.gene27329:CDS | 45.0% | |
TCGAAGGTTATCCGTACACT+TGG | + | chr1.2:2571040-2571059 | MS.gene27329:intron | 45.0% | |
TCTAGTAGCTTGGAATTGCC+GGG | + | chr1.2:2570522-2570541 | MS.gene27329:intron | 45.0% | |
TGCGACATAGAGACAGGAAT+AGG | - | chr1.2:2569978-2569997 | None:intergenic | 45.0% | |
TGCTACTGTTGAGACTCTTG+TGG | + | chr1.2:2571149-2571168 | MS.gene27329:intron | 45.0% | |
TTAAGGTCGGGAATTGCACT+CGG | - | chr1.2:2570559-2570578 | None:intergenic | 45.0% | |
TTGGAACAGCTGCTACTAAC+AGG | + | chr1.2:2569940-2569959 | MS.gene27329:CDS | 45.0% | |
TTTGCTGCTGATGGGACTAT+GGG | + | chr1.2:2570371-2570390 | MS.gene27329:CDS | 45.0% | |
! | AATGGCAGGTTCTGATGATC+AGG | + | chr1.2:2570481-2570500 | MS.gene27329:intron | 45.0% |
! | ACACGCCACTCTTGTTTCAA+AGG | - | chr1.2:2569741-2569760 | None:intergenic | 45.0% |
! | AGTGCCGGACTAGGTATTTA+AGG | - | chr1.2:2570576-2570595 | None:intergenic | 45.0% |
! | ATTTGCTGCTGATGGGACTA+TGG | + | chr1.2:2570370-2570389 | MS.gene27329:CDS | 45.0% |
! | CCGGACTAGGTATTTAAGGT+CGG | - | chr1.2:2570572-2570591 | None:intergenic | 45.0% |
! | CGGACTAGGTATTTAAGGTC+GGG | - | chr1.2:2570571-2570590 | None:intergenic | 45.0% |
! | CTTGGTAATTGGCGTGTTAC+CGG | + | chr1.2:2570805-2570824 | MS.gene27329:intron | 45.0% |
! | TCAAGGACAGCAGCATTTTC+TGG | - | chr1.2:2569297-2569316 | None:intergenic | 45.0% |
! | TGTTTTCATGTAGACCGCAC+CGG | + | chr1.2:2570682-2570701 | MS.gene27329:intron | 45.0% |
!! | TGATGATGGAGTCCGTAGAT+GGG | + | chr1.2:2569887-2569906 | MS.gene27329:CDS | 45.0% |
!!! | CCGGGGGTTTAGCTTTATTT+TGG | + | chr1.2:2570710-2570729 | MS.gene27329:intron | 45.0% |
AAAACTTGGGACGACACCAG+GGG | - | chr1.2:2569541-2569560 | None:intergenic | 50.0% | |
AAGTCTTGGTACTCCACGTG+CGG | + | chr1.2:2571068-2571087 | MS.gene27329:intron | 50.0% | |
ACAAAACTTGGGACGACACC+AGG | - | chr1.2:2569543-2569562 | None:intergenic | 50.0% | |
ACTAGAGGCTGTTGTACCTG+TGG | - | chr1.2:2570213-2570232 | None:intergenic | 50.0% | |
ACTGTTGGGGCATACTGACA+AGG | + | chr1.2:2569836-2569855 | MS.gene27329:CDS | 50.0% | |
AGGTGAGACCGTCAAGATTC+AGG | - | chr1.2:2569236-2569255 | None:intergenic | 50.0% | |
ATAACCTTCGACGGGAACGT+CGG | - | chr1.2:2571031-2571050 | None:intergenic | 50.0% | |
ATCCCCCCCATGACTAACAT+TGG | - | chr1.2:2570414-2570433 | None:intergenic | 50.0% | |
ATTGAATCTCGCGATCAGCC+AGG | - | chr1.2:2569341-2569360 | None:intergenic | 50.0% | |
CAAAACTTGGGACGACACCA+GGG | - | chr1.2:2569542-2569561 | None:intergenic | 50.0% | |
CCCACCAACCTGAATCTTGA+CGG | + | chr1.2:2569225-2569244 | MS.gene27329:CDS | 50.0% | |
CGTCAAGCGGTTCTTGATTC+AGG | + | chr1.2:2571000-2571019 | MS.gene27329:intron | 50.0% | |
CGTTTAGGAATCTGTAGCCG+AGG | - | chr1.2:2571222-2571241 | None:intergenic | 50.0% | |
CTAGACTCATTCACCTAGGC+AGG | - | chr1.2:2570507-2570526 | None:intergenic | 50.0% | |
CTAGTAGCTTGGAATTGCCG+GGG | + | chr1.2:2570523-2570542 | MS.gene27329:intron | 50.0% | |
CTGCCCGTGTTCTTGATGAA+GGG | + | chr1.2:2569472-2569491 | MS.gene27329:CDS | 50.0% | |
GAACAGCTGCTACTAACAGG+TGG | + | chr1.2:2569943-2569962 | MS.gene27329:CDS | 50.0% | |
GAGACCGTCAAGATTCAGGT+TGG | - | chr1.2:2569232-2569251 | None:intergenic | 50.0% | |
GAGTCTCAACAGTAGCATGC+GGG | - | chr1.2:2571146-2571165 | None:intergenic | 50.0% | |
GCAGGTAATCCAAGCACCAA+TGG | - | chr1.2:2570251-2570270 | None:intergenic | 50.0% | |
GCTAACACTGCTGAAGGCAA+TGG | + | chr1.2:2570035-2570054 | MS.gene27329:CDS | 50.0% | |
GCTGATCTACGACCTCCATT+AGG | - | chr1.2:2570844-2570863 | None:intergenic | 50.0% | |
GCTTGGATTACCTGCTGTTC+CGG | + | chr1.2:2570256-2570275 | MS.gene27329:CDS | 50.0% | |
GGTGAGCTAGTGTCTCACTT+AGG | - | chr1.2:2570618-2570637 | None:intergenic | 50.0% | |
GTGTACGGATAACCTTCGAC+GGG | - | chr1.2:2571039-2571058 | None:intergenic | 50.0% | |
GTGTTCTTGATGAAGGGCCA+TGG | + | chr1.2:2569478-2569497 | MS.gene27329:CDS | 50.0% | |
GTTATGGACCGTATTTCCCC+TGG | + | chr1.2:2569522-2569541 | MS.gene27329:CDS | 50.0% | |
GTTGTACCTGTGGAGGAAGA+GGG | - | chr1.2:2570203-2570222 | None:intergenic | 50.0% | |
TAAGGTCGGGAATTGCACTC+GGG | - | chr1.2:2570558-2570577 | None:intergenic | 50.0% | |
TATGCTTCCTGACCGTCCAT+TGG | + | chr1.2:2570232-2570251 | MS.gene27329:CDS | 50.0% | |
TCAGTTGAAACCGGAACAGC+AGG | - | chr1.2:2570269-2570288 | None:intergenic | 50.0% | |
TGCGGCCATCATAAGCTTTG+AGG | - | chr1.2:2569665-2569684 | None:intergenic | 50.0% | |
TGCTGCCCAAAATGCTGTCT+TGG | + | chr1.2:2570130-2570149 | MS.gene27329:CDS | 50.0% | |
TGCTTGGAAGCCAGGCAAAA+AGG | + | chr1.2:2569389-2569408 | MS.gene27329:CDS | 50.0% | |
TGGCCCTTCATCAAGAACAC+GGG | - | chr1.2:2569478-2569497 | None:intergenic | 50.0% | |
TGTTGTACCTGTGGAGGAAG+AGG | - | chr1.2:2570204-2570223 | None:intergenic | 50.0% | |
! | ACGGTCAGGAAGCATACTAG+AGG | - | chr1.2:2570228-2570247 | None:intergenic | 50.0% |
! | GCGGCCATCATAAGCTTTGA+GGG | - | chr1.2:2569664-2569683 | None:intergenic | 50.0% |
! | GTGATCGTGACCTTTTTGCC+TGG | - | chr1.2:2569402-2569421 | None:intergenic | 50.0% |
! | TGGCGTGTTACCGGCTATTA+TGG | + | chr1.2:2570814-2570833 | MS.gene27329:intron | 50.0% |
! | TGGCGTGTTCGTGCTACTAA+TGG | + | chr1.2:2569753-2569772 | MS.gene27329:CDS | 50.0% |
! | TGTCACAGGTGTGGACTGTT+GGG | + | chr1.2:2569822-2569841 | MS.gene27329:CDS | 50.0% |
! | TTGTCACAGGTGTGGACTGT+TGG | + | chr1.2:2569821-2569840 | MS.gene27329:CDS | 50.0% |
!! | ACCGTCAAGATTCAGGTTGG+TGG | - | chr1.2:2569229-2569248 | None:intergenic | 50.0% |
!! | CCGTCAAGATTCAGGTTGGT+GGG | - | chr1.2:2569228-2569247 | None:intergenic | 50.0% |
!! | CTGATGATGGAGTCCGTAGA+TGG | + | chr1.2:2569886-2569905 | MS.gene27329:CDS | 50.0% |
!! | GAGTTCTGGATTCAGGTCCA+TGG | + | chr1.2:2569579-2569598 | MS.gene27329:CDS | 50.0% |
!! | GATGATGGAGTCCGTAGATG+GGG | + | chr1.2:2569888-2569907 | MS.gene27329:CDS | 50.0% |
AACCTTTCTTCCACCGCACG+TGG | - | chr1.2:2571084-2571103 | None:intergenic | 55.0% | |
AGAGGCTGTTGTACCTGTGG+AGG | - | chr1.2:2570210-2570229 | None:intergenic | 55.0% | |
AGCTAAACCCCCGGATCTAC+CGG | - | chr1.2:2570704-2570723 | None:intergenic | 55.0% | |
ATGTCTCGTGCTTGGAAGCC+AGG | + | chr1.2:2569381-2569400 | MS.gene27329:CDS | 55.0% | |
CACGGGCAGCATCAACCTTA+TGG | - | chr1.2:2569461-2569480 | None:intergenic | 55.0% | |
CCTAGTCCGGCACTTCAATC+CGG | + | chr1.2:2570582-2570601 | MS.gene27329:intron | 55.0% | |
CTGTCTCATAGGTCGAGTCC+TGG | + | chr1.2:2569320-2569339 | MS.gene27329:CDS | 55.0% | |
GACGAGACCTTCCTCAGACA+AGG | - | chr1.2:2569256-2569275 | None:intergenic | 55.0% | |
GATGGCTGCGACATAGAGAC+AGG | - | chr1.2:2569984-2570003 | None:intergenic | 55.0% | |
GCTGCCCGTGTTCTTGATGA+AGG | + | chr1.2:2569471-2569490 | MS.gene27329:CDS | 55.0% | |
GGAATCTGTAGCCGAGGTGT+AGG | - | chr1.2:2571216-2571235 | None:intergenic | 55.0% | |
GGACGACACCAGGGGAAATA+CGG | - | chr1.2:2569533-2569552 | None:intergenic | 55.0% | |
GGTCTCACCTTGTCTGAGGA+AGG | + | chr1.2:2569246-2569265 | MS.gene27329:CDS | 55.0% | |
TCAGGTCCATGGTGCATCCT+AGG | + | chr1.2:2570901-2570920 | MS.gene27329:intron | 55.0% | |
TCTGATGATCAGGCCTGCCT+AGG | + | chr1.2:2570491-2570510 | MS.gene27329:intron | 55.0% | |
TGACGGTCTCACCTTGTCTG+AGG | + | chr1.2:2569242-2569261 | MS.gene27329:CDS | 55.0% | |
TTATCCGACGTTCCCGTCGA+AGG | + | chr1.2:2571024-2571043 | MS.gene27329:intron | 55.0% | |
! | GCAGCAGCATTGAGAGGAGA+TGG | - | chr1.2:2570002-2570021 | None:intergenic | 55.0% |
! | GTCACAGGTGTGGACTGTTG+GGG | + | chr1.2:2569823-2569842 | MS.gene27329:CDS | 55.0% |
CCAAGCACCAATGGACGGTC+AGG | - | chr1.2:2570242-2570261 | None:intergenic | 60.0% | |
CTCCACGTGCGGTGGAAGAA+AGG | + | chr1.2:2571079-2571098 | MS.gene27329:intron | 60.0% | |
GAGGTCGTAGATCAGCCGCT+TGG | + | chr1.2:2570848-2570867 | MS.gene27329:intron | 60.0% | |
GCGAGCGTATGTCTCGTGCT+TGG | + | chr1.2:2569373-2569392 | MS.gene27329:CDS | 60.0% | |
GCTCGCGCTAACACTGCTGA+AGG | + | chr1.2:2570029-2570048 | MS.gene27329:CDS | 60.0% | |
GCTTGGAATTGCCGGGGTGT+AGG | + | chr1.2:2570529-2570548 | MS.gene27329:intron | 60.0% | |
TCTTGGTACTCCACGTGCGG+TGG | + | chr1.2:2571071-2571090 | MS.gene27329:intron | 60.0% | |
! | CCTGACCGTCCATTGGTGCT+TGG | + | chr1.2:2570239-2570258 | MS.gene27329:CDS | 60.0% |
! | GCAGGAGCAGCAGCATTGAG+AGG | - | chr1.2:2570008-2570027 | None:intergenic | 60.0% |
! | GTAGACCGCACCGGTAGATC+CGG | + | chr1.2:2570691-2570710 | MS.gene27329:intron | 60.0% |
! | TAGACCGCACCGGTAGATCC+GGG | + | chr1.2:2570692-2570711 | MS.gene27329:intron | 60.0% |
!! | CCGGATTGAAGTGCCGGACT+AGG | - | chr1.2:2570585-2570604 | None:intergenic | 60.0% |
AACCCCCGGATCTACCGGTG+CGG | - | chr1.2:2570699-2570718 | None:intergenic | 65.0% | |
CACTCGGGCTACCTACACCC+CGG | - | chr1.2:2570543-2570562 | None:intergenic | 65.0% | |
CTGCTGCCCTCTTCCTCCAC+AGG | + | chr1.2:2570194-2570213 | MS.gene27329:CDS | 65.0% | |
GCAGTGTTAGCGCGAGCAGC+AGG | - | chr1.2:2570026-2570045 | None:intergenic | 65.0% | |
! | AGACCGCACCGGTAGATCCG+GGG | + | chr1.2:2570693-2570712 | MS.gene27329:intron | 65.0% |
! | GACCGCACCGGTAGATCCGG+GGG | + | chr1.2:2570694-2570713 | MS.gene27329:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 2569219 | 2571273 | 2569219 | ID=MS.gene27329 |
chr1.2 | mRNA | 2569219 | 2571273 | 2569219 | ID=MS.gene27329.t1;Parent=MS.gene27329 |
chr1.2 | exon | 2569219 | 2570441 | 2569219 | ID=MS.gene27329.t1.exon1;Parent=MS.gene27329.t1 |
chr1.2 | CDS | 2569219 | 2570441 | 2569219 | ID=cds.MS.gene27329.t1;Parent=MS.gene27329.t1 |
chr1.2 | exon | 2571162 | 2571273 | 2571162 | ID=MS.gene27329.t1.exon2;Parent=MS.gene27329.t1 |
chr1.2 | CDS | 2571162 | 2571273 | 2571162 | ID=cds.MS.gene27329.t1;Parent=MS.gene27329.t1 |
Gene Sequence |
Protein sequence |