AlfalfaGEDB | MS.gene08713

M. sativa cultivar XinJiangDaYe / MS.gene08713

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene08713.t1	RHN40311.1	62.4	266	97	2	1	266	62	324	1.60E-95	359.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene08713.t1	A0A396GJD3	62.4	266	97	2	1	266	62	324	1.1e-95	359.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene26433	MS.gene08713	PPI
MS.gene34463	MS.gene08713	PPI
MS.gene048088	MS.gene08713	PPI
MS.gene08713	MS.gene09023	PPI
MS.gene22730	MS.gene08713	PPI
MS.gene08713	MS.gene054508	PPI
MS.gene08713	MS.gene025987	PPI
MS.gene003264	MS.gene08713	PPI
MS.gene073582	MS.gene08713	PPI
MS.gene08713	MS.gene95960	PPI
MS.gene08713	MS.gene043140	PPI
MS.gene058889	MS.gene08713	PPI
MS.gene98616	MS.gene08713	PPI
MS.gene08713	MS.gene03149	PPI
MS.gene53904	MS.gene08713	PPI
MS.gene08708	MS.gene08713	PPI
MS.gene69586	MS.gene08713	PPI
MS.gene042027	MS.gene08713	PPI
MS.gene08713	MS.gene29321	PPI
MS.gene69490	MS.gene08713	PPI
MS.gene015248	MS.gene08713	PPI
MS.gene08713	MS.gene025401	PPI
MS.gene08713	MS.gene015093	PPI
MS.gene80362	MS.gene08713	PPI
MS.gene44083	MS.gene08713	PPI
MS.gene013193	MS.gene08713	PPI
MS.gene04970	MS.gene08713	PPI
MS.gene08713	MS.gene24278	PPI
MS.gene08106	MS.gene08713	PPI
MS.gene08713	MS.gene000379	PPI
MS.gene08713	MS.gene34618	PPI
MS.gene51799	MS.gene08713	PPI
MS.gene08713	MS.gene59460	PPI
MS.gene58419	MS.gene08713	PPI
MS.gene96163	MS.gene08713	PPI
MS.gene23521	MS.gene08713	PPI
MS.gene08713	MS.gene09517	PPI
MS.gene63150	MS.gene08713	PPI
MS.gene29406	MS.gene08713	PPI
MS.gene54051	MS.gene08713	PPI
MS.gene86275	MS.gene08713	PPI
MS.gene98127	MS.gene08713	PPI
MS.gene87529	MS.gene08713	PPI
MS.gene024405	MS.gene08713	PPI
MS.gene012748	MS.gene08713	PPI
MS.gene04134	MS.gene08713	PPI
MS.gene062067	MS.gene08713	PPI
MS.gene57044	MS.gene08713	PPI
MS.gene08713	MS.gene44144	PPI
MS.gene054508	MS.gene08713	PPI
MS.gene89815	MS.gene08713	PPI
MS.gene028714	MS.gene08713	PPI
MS.gene08713	MS.gene044729	PPI
MS.gene049610	MS.gene08713	PPI
MS.gene017586	MS.gene08713	PPI
MS.gene038676	MS.gene08713	PPI
MS.gene060718	MS.gene08713	PPI
MS.gene98756	MS.gene08713	PPI
MS.gene71637	MS.gene08713	PPI
MS.gene042651	MS.gene08713	PPI
MS.gene05576	MS.gene08713	PPI
MS.gene98467	MS.gene08713	PPI
MS.gene42010	MS.gene08713	PPI
MS.gene037049	MS.gene08713	PPI
MS.gene034643	MS.gene08713	PPI
MS.gene044729	MS.gene08713	PPI
MS.gene037634	MS.gene08713	PPI
MS.gene08713	MS.gene057934	PPI
MS.gene08713	MS.gene37537	PPI
MS.gene24070	MS.gene08713	PPI
MS.gene08713	MS.gene069786	PPI
MS.gene08713	MS.gene025158	PPI
MS.gene08713	MS.gene27329	PPI
MS.gene08713	MS.gene77990	PPI
MS.gene08713	MS.gene41393	PPI
MS.gene071784	MS.gene08713	PPI
MS.gene027169	MS.gene08713	PPI
MS.gene061579	MS.gene08713	PPI
MS.gene039692	MS.gene08713	PPI
MS.gene76420	MS.gene08713	PPI
MS.gene071320	MS.gene08713	PPI
MS.gene08713	MS.gene016632	PPI
MS.gene08713	MS.gene018474	PPI
MS.gene42903	MS.gene08713	PPI
MS.gene81712	MS.gene08713	PPI
MS.gene026680	MS.gene08713	PPI
MS.gene08713	MS.gene96163	PPI
MS.gene048747	MS.gene08713	PPI
MS.gene042559	MS.gene08713	PPI
MS.gene22200	MS.gene08713	PPI
MS.gene055546	MS.gene08713	PPI
MS.gene26038	MS.gene08713	PPI
MS.gene85308	MS.gene08713	PPI
MS.gene49057	MS.gene08713	PPI
MS.gene073573	MS.gene08713	PPI
MS.gene012889	MS.gene08713	PPI
MS.gene031967	MS.gene08713	PPI
MS.gene053373	MS.gene08713	PPI
MS.gene34812	MS.gene08713	PPI
MS.gene02896	MS.gene08713	PPI
MS.gene08713	MS.gene61499	PPI
MS.gene063214	MS.gene08713	PPI
MS.gene55682	MS.gene08713	PPI
MS.gene97410	MS.gene08713	PPI
MS.gene32415	MS.gene08713	PPI
MS.gene060788	MS.gene08713	PPI
MS.gene035626	MS.gene08713	PPI
MS.gene08713	MS.gene81194	PPI
MS.gene08713	MS.gene060773	PPI
MS.gene067340	MS.gene08713	PPI
MS.gene65623	MS.gene08713	PPI
MS.gene08713	MS.gene038394	PPI
MS.gene71675	MS.gene08713	PPI
MS.gene019177	MS.gene08713	PPI
MS.gene69495	MS.gene08713	PPI
MS.gene049512	MS.gene08713	PPI
MS.gene038623	MS.gene08713	PPI
MS.gene08713	MS.gene24070	PPI
MS.gene55209	MS.gene08713	PPI
MS.gene05357	MS.gene08713	PPI
MS.gene032311	MS.gene08713	PPI
MS.gene64178	MS.gene08713	PPI
MS.gene004417	MS.gene08713	PPI
MS.gene96174	MS.gene08713	PPI
MS.gene08713	MS.gene055546	PPI
MS.gene86849	MS.gene08713	PPI
MS.gene50392	MS.gene08713	PPI
MS.gene072852	MS.gene08713	PPI
MS.gene41393	MS.gene08713	PPI
MS.gene39956	MS.gene08713	PPI
MS.gene021968	MS.gene08713	PPI
MS.gene09589	MS.gene08713	PPI
MS.gene08713	MS.gene068629	PPI
MS.gene08713	MS.gene009781	PPI
MS.gene43393	MS.gene08713	PPI
MS.gene057828	MS.gene08713	PPI
MS.gene34197	MS.gene08713	PPI
MS.gene08713	MS.gene21066	PPI
MS.gene66650	MS.gene08713	PPI
MS.gene005120	MS.gene08713	PPI
MS.gene08713	MS.gene98127	PPI
MS.gene08713	MS.gene003264	PPI
MS.gene048072	MS.gene08713	PPI
MS.gene060386	MS.gene08713	PPI
MS.gene71588	MS.gene08713	PPI
MS.gene04749	MS.gene08713	PPI
MS.gene05436	MS.gene08713	PPI
MS.gene059736	MS.gene08713	PPI
MS.gene70932	MS.gene08713	PPI
MS.gene08713	MS.gene49057	PPI
MS.gene35175	MS.gene08713	PPI
MS.gene81194	MS.gene08713	PPI
MS.gene08713	MS.gene048088	PPI
MS.gene08713	MS.gene86868	PPI
MS.gene025675	MS.gene08713	PPI
MS.gene069786	MS.gene08713	PPI
MS.gene021965	MS.gene08713	PPI
MS.gene055683	MS.gene08713	PPI
MS.gene042614	MS.gene08713	PPI
MS.gene41643	MS.gene08713	PPI
MS.gene013890	MS.gene08713	PPI
MS.gene26844	MS.gene08713	PPI
MS.gene021555	MS.gene08713	PPI
MS.gene060773	MS.gene08713	PPI
MS.gene021647	MS.gene08713	PPI
MS.gene96109	MS.gene08713	PPI
MS.gene69584	MS.gene08713	PPI
MS.gene019165	MS.gene08713	PPI
MS.gene048706	MS.gene08713	PPI
MS.gene08713	MS.gene012889	PPI
MS.gene009121	MS.gene08713	PPI
MS.gene94654	MS.gene08713	PPI
MS.gene024841	MS.gene08713	PPI
MS.gene51804	MS.gene08713	PPI
MS.gene87845	MS.gene08713	PPI
MS.gene36069	MS.gene08713	PPI
MS.gene83772	MS.gene08713	PPI
MS.gene009213	MS.gene08713	PPI
MS.gene008927	MS.gene08713	PPI
MS.gene016102	MS.gene08713	PPI
MS.gene045614	MS.gene08713	PPI
MS.gene96541	MS.gene08713	PPI
MS.gene049561	MS.gene08713	PPI
MS.gene000634	MS.gene08713	PPI
MS.gene009781	MS.gene08713	PPI
MS.gene63762	MS.gene08713	PPI
MS.gene27329	MS.gene08713	PPI
MS.gene30208	MS.gene08713	PPI
MS.gene028716	MS.gene08713	PPI
MS.gene025873	MS.gene08713	PPI
MS.gene06164	MS.gene08713	PPI
MS.gene013676	MS.gene08713	PPI
MS.gene05358	MS.gene08713	PPI
MS.gene030090	MS.gene08713	PPI
MS.gene95561	MS.gene08713	PPI
MS.gene074257	MS.gene08713	PPI
MS.gene018196	MS.gene08713	PPI
MS.gene065627	MS.gene08713	PPI
MS.gene08713	MS.gene060788	PPI
MS.gene57019	MS.gene08713	PPI
MS.gene010890	MS.gene08713	PPI
MS.gene018745	MS.gene08713	PPI
MS.gene65546	MS.gene08713	PPI
MS.gene09023	MS.gene08713	PPI
MS.gene000506	MS.gene08713	PPI
MS.gene08713	MS.gene027994	PPI
MS.gene08713	MS.gene022929	PPI
MS.gene032299	MS.gene08713	PPI
MS.gene08713	MS.gene007022	PPI
MS.gene03936	MS.gene08713	PPI
MS.gene038098	MS.gene08713	PPI
MS.gene08713	MS.gene69584	PPI
MS.gene60059	MS.gene08713	PPI
MS.gene062511	MS.gene08713	PPI
MS.gene22111	MS.gene08713	PPI
MS.gene28545	MS.gene08713	PPI
MS.gene28718	MS.gene08713	PPI
MS.gene08713	MS.gene048342	PPI
MS.gene055560	MS.gene08713	PPI
MS.gene008275	MS.gene08713	PPI
MS.gene08713	MS.gene069624	PPI
MS.gene29321	MS.gene08713	PPI
MS.gene34618	MS.gene08713	PPI
MS.gene038757	MS.gene08713	PPI
MS.gene064966	MS.gene08713	PPI
MS.gene016632	MS.gene08713	PPI
MS.gene002590	MS.gene08713	PPI
MS.gene08713	MS.gene88393	PPI
MS.gene08713	MS.gene008658	PPI
MS.gene40828	MS.gene08713	PPI
MS.gene43924	MS.gene08713	PPI
MS.gene046089	MS.gene08713	PPI
MS.gene047954	MS.gene08713	PPI
MS.gene77990	MS.gene08713	PPI
MS.gene036423	MS.gene08713	PPI
MS.gene054652	MS.gene08713	PPI
MS.gene08713	MS.gene65474	PPI
MS.gene013644	MS.gene08713	PPI
MS.gene72520	MS.gene08713	PPI
MS.gene66651	MS.gene08713	PPI
MS.gene08713	MS.gene032299	PPI
MS.gene35202	MS.gene08713	PPI
MS.gene051449	MS.gene08713	PPI
MS.gene019001	MS.gene08713	PPI
MS.gene08713	MS.gene08606	PPI
MS.gene63743	MS.gene08713	PPI
MS.gene08713	MS.gene000640	PPI
MS.gene08713	MS.gene98756	PPI
MS.gene48477	MS.gene08713	PPI
MS.gene045875	MS.gene08713	PPI
MS.gene038394	MS.gene08713	PPI
MS.gene30136	MS.gene08713	PPI
MS.gene08713	MS.gene74639	PPI
MS.gene08713	MS.gene071133	PPI
MS.gene08713	MS.gene60266	PPI
MS.gene95960	MS.gene08713	PPI
MS.gene008861	MS.gene08713	PPI
MS.gene61452	MS.gene08713	PPI
MS.gene08713	MS.gene62249	PPI
MS.gene73261	MS.gene08713	PPI
MS.gene024297	MS.gene08713	PPI
MS.gene08713	MS.gene54051	PPI
MS.gene83979	MS.gene08713	PPI
MS.gene46941	MS.gene08713	PPI
MS.gene45083	MS.gene08713	PPI
MS.gene92517	MS.gene08713	PPI
MS.gene08713	MS.gene37955	PPI
MS.gene85295	MS.gene08713	PPI
MS.gene057934	MS.gene08713	PPI
MS.gene08713	MS.gene92517	PPI
MS.gene47792	MS.gene08713	PPI
MS.gene46948	MS.gene08713	PPI
MS.gene08713	MS.gene010890	PPI
MS.gene08713	MS.gene84790	PPI
MS.gene98471	MS.gene08713	PPI
MS.gene012019	MS.gene08713	PPI
MS.gene08713	MS.gene60390	PPI
MS.gene025401	MS.gene08713	PPI
MS.gene08713	MS.gene039692	PPI
MS.gene93396	MS.gene08713	PPI
MS.gene52349	MS.gene08713	PPI
MS.gene05231	MS.gene08713	PPI
MS.gene46353	MS.gene08713	PPI
MS.gene010656	MS.gene08713	PPI
MS.gene000629	MS.gene08713	PPI
MS.gene059269	MS.gene08713	PPI
MS.gene08713	MS.gene062511	PPI
MS.gene40469	MS.gene08713	PPI
MS.gene041264	MS.gene08713	PPI
MS.gene41979	MS.gene08713	PPI
MS.gene024522	MS.gene08713	PPI
MS.gene64130	MS.gene08713	PPI
MS.gene05319	MS.gene08713	PPI
MS.gene08713	MS.gene024841	PPI
MS.gene56991	MS.gene08713	PPI
MS.gene050679	MS.gene08713	PPI
MS.gene85538	MS.gene08713	PPI
MS.gene20246	MS.gene08713	PPI
MS.gene055223	MS.gene08713	PPI
MS.gene08713	MS.gene46353	PPI
MS.gene016719	MS.gene08713	PPI
MS.gene010290	MS.gene08713	PPI
MS.gene053747	MS.gene08713	PPI
MS.gene08713	MS.gene61651	PPI
MS.gene65471	MS.gene08713	PPI
MS.gene061850	MS.gene08713	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene08713.t1	MTR_6g033215	80.412	194	38	0	2	195	102	295	1.76e-117	339
MS.gene08713.t1	MTR_6g053790	54.730	148	44	2	131	277	35	160	2.37e-45	156
MS.gene08713.t1	MTR_0010s0370	33.766	154	102	0	19	172	24	177	3.70e-28	107
MS.gene08713.t1	MTR_0010s0350	33.766	154	102	0	19	172	24	177	3.70e-28	107
MS.gene08713.t1	MTR_6g053230	29.189	185	92	2	1	182	22	170	3.75e-26	107
MS.gene08713.t1	MTR_8g468010	58.730	63	26	0	110	172	1	63	8.10e-26	99.8
MS.gene08713.t1	MTR_4g075740	40.714	140	63	4	2	140	22	142	3.33e-21	88.2
MS.gene08713.t1	MTR_3g024240	36.364	121	75	1	76	194	54	174	3.72e-21	89.0
MS.gene08713.t1	MTR_1g032270	48.718	78	39	1	93	169	1	78	3.77e-21	87.8
MS.gene08713.t1	MTR_4g020545	28.986	207	93	6	57	263	80	232	3.91e-20	88.6
MS.gene08713.t1	MTR_3g053920	32.692	104	70	0	22	125	29	132	5.14e-19	85.1
MS.gene08713.t1	MTR_2g061500	31.683	101	69	0	22	122	29	129	2.90e-16	74.3
MS.gene08713.t1	MTR_3g041640	64.286	42	15	0	110	151	1	42	4.75e-14	68.6
MS.gene08713.t1	MTR_7g011710	32.099	81	55	0	52	132	5	85	8.66e-13	65.5
MS.gene08713.t1	MTR_4g103530	31.461	89	61	0	52	140	5	93	1.76e-12	65.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene08713.t1	AT3G31430	25.907	193	137	2	27	219	132	318	1.89e-14	72.8
MS.gene08713.t1	AT2G01050	24.590	183	132	3	28	210	80	256	2.00e-14	73.6
MS.gene08713.t1	AT2G17920	25.000	144	104	2	67	210	79	218	4.32e-13	68.9
MS.gene08713.t1	AT5G18636	25.000	136	96	3	77	210	87	218	9.11e-12	65.1
MS.gene08713.t1	AT5G25200	25.000	136	96	3	77	210	87	218	1.02e-11	65.1
MS.gene08713.t1	AT2G02103	25.000	136	96	3	77	210	87	218	1.70e-11	64.7

Find 95 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAACATTGATTCATAATTAT+TGG	0.151849	4.2:-43756733	None:intergenic
CCAACTGCCCTTTGGTTTGA+TGG	0.236183	4.2:+43756293	MS.gene08713:CDS
ATGAGAGTCATGCGATATTT+TGG	0.240965	4.2:-43756093	None:intergenic
CTCCAATCTCGACCTTCTTC+AGG	0.277767	4.2:-43756218	None:intergenic
CTTAGTCCAACTTTATTCTA+AGG	0.290141	4.2:+43756137	MS.gene08713:CDS
GGCGGAGGTTTATGCGAATC+AGG	0.331581	4.2:+43756394	MS.gene08713:CDS
CCATGGACACCACTGAAATC+TGG	0.345378	4.2:+43756259	MS.gene08713:CDS
TAAGAATTTGTTACCTTCCA+TGG	0.372575	4.2:-43756118	None:intergenic
TTTGACGAGGACAACAACTA+TGG	0.380770	4.2:+43756366	MS.gene08713:CDS
TTCCCATATGGGGCCAAGTC+TGG	0.388607	4.2:-43756070	None:intergenic
TATGAATCAATGTTAATTGA+TGG	0.400948	4.2:+43756741	MS.gene08713:CDS
GCGAGAGCAGCAAGAAGAAA+TGG	0.402237	4.2:+43756586	MS.gene08713:CDS
AGACCAGACTTGGCCCCATA+TGG	0.408994	4.2:+43756067	MS.gene08713:CDS
GGTGAACAAGCCGATTCATT+TGG	0.413532	4.2:+43756035	MS.gene08713:CDS
GACTATCAAATATGAGAAGC+TGG	0.417388	4.2:+43756491	MS.gene08713:CDS
CTGGTCATTGAGAGGGAAGA+AGG	0.420922	4.2:+43756453	MS.gene08713:CDS
CAGATTCACCAACTGCCCTT+TGG	0.422119	4.2:+43756285	MS.gene08713:CDS
TCTCACTCAAGCTGAGCTGC+TGG	0.441593	4.2:+43755987	MS.gene08713:CDS
CTGCTGGACCTGTGTCTTGT+GGG	0.444532	4.2:+43756003	MS.gene08713:CDS
CGAGAGCAGCAAGAAGAAAT+GGG	0.444678	4.2:+43756587	MS.gene08713:CDS
ATAACAAGGAGGCGAATAGA+TGG	0.444680	4.2:+43756649	MS.gene08713:CDS
GATCTGCCTTAGAATAAAGT+TGG	0.446887	4.2:-43756143	None:intergenic
ATTCTAAGGCAGATCTGAAA+AGG	0.451554	4.2:+43756151	MS.gene08713:CDS
ATCCTGAAGAAGGTCGAGAT+TGG	0.457061	4.2:+43756216	MS.gene08713:CDS
GCTACTCTTGAGACCAGACT+TGG	0.462232	4.2:+43756057	MS.gene08713:CDS
AGCTCAGCTTGAGTGAGATT+CGG	0.469221	4.2:-43755982	None:intergenic
GAGAAGGTTGGAGCTCTTGT+TGG	0.472812	4.2:+43756318	MS.gene08713:CDS
CATGGACACCACTGAAATCT+GGG	0.475827	4.2:+43756260	MS.gene08713:CDS
GGATTCTTGAACGCAGTCCT+TGG	0.477432	4.2:+43756172	MS.gene08713:CDS
TCCGGTGATCGGAGGGATGA+GGG	0.483036	4.2:+43756696	MS.gene08713:CDS
CCCCTCATCCCTCCGATCAC+CGG	0.487093	4.2:-43756697	None:intergenic
ATGACCAGCTCTTGTTGTAA+TGG	0.489258	4.2:-43756438	None:intergenic
GGCGGCCGGAGTAACAATTC+CGG	0.491850	4.2:+43756678	MS.gene08713:CDS
TTCCGGTGATCGGAGGGATG+AGG	0.492201	4.2:+43756695	MS.gene08713:CDS
CCAGATTTCAGTGGTGTCCA+TGG	0.495976	4.2:-43756259	None:intergenic
GAGGCGAATAGATGGATCAT+AGG	0.496078	4.2:+43756657	MS.gene08713:CDS
GCTGCTGGACCTGTGTCTTG+TGG	0.502634	4.2:+43756002	MS.gene08713:CDS
AAGAATTTGTTACCTTCCAT+GGG	0.513146	4.2:-43756117	None:intergenic
CTTTGGTTTGATGGATGAGA+AGG	0.514797	4.2:+43756302	MS.gene08713:CDS
TTGAATCTTAACGCTGATCA+TGG	0.519220	4.2:+43755943	MS.gene08713:CDS
AACAAGAGCTGGTCATTGAG+AGG	0.523901	4.2:+43756445	MS.gene08713:CDS
TCAAGAGTAGCCAAATGAAT+CGG	0.535101	4.2:-43756045	None:intergenic
TGGTCATTGAGAGGGAAGAA+GGG	0.536400	4.2:+43756454	MS.gene08713:CDS
TAATATGATCATCCTGAAGA+AGG	0.539277	4.2:+43756206	MS.gene08713:CDS
TTGTTCTCCGCCTTGAGGAA+AGG	0.539787	4.2:-43756612	None:intergenic
TGCAGTGACAAGTTTGAAGA+GGG	0.542366	4.2:+43756561	MS.gene08713:CDS
TTCTCATCCATCAAACCAAA+GGG	0.542447	4.2:-43756300	None:intergenic
ACAACTATGGGCCATGGCGG+AGG	0.544452	4.2:+43756379	MS.gene08713:CDS
CTGCAGTGACAAGTTTGAAG+AGG	0.548630	4.2:+43756560	MS.gene08713:CDS
GCTCTTGTTGGTACGCATGT+GGG	0.557435	4.2:+43756330	MS.gene08713:CDS
CTCTTGTTGGTACGCATGTG+GGG	0.558951	4.2:+43756331	MS.gene08713:CDS
CCATCAAACCAAAGGGCAGT+TGG	0.559436	4.2:-43756293	None:intergenic
GCGTCCATATAATCTGTGAC+TGG	0.559615	4.2:-43756774	None:intergenic
AGCTCTTGTTGGTACGCATG+TGG	0.563158	4.2:+43756329	MS.gene08713:CDS
TCAGCCATTACAACAAGAGC+TGG	0.567370	4.2:+43756434	MS.gene08713:CDS
GTGTCTTGTGGGTCGTGTTG+TGG	0.567597	4.2:+43756014	MS.gene08713:CDS
GCGAATCAGGGTGGAAGTTG+CGG	0.568634	4.2:+43756407	MS.gene08713:CDS
CTGAATTGTTCTCCGCCTTG+AGG	0.571520	4.2:-43756617	None:intergenic
GGTTTGATGGATGAGAAGGT+TGG	0.572484	4.2:+43756306	MS.gene08713:CDS
GACCAGACTTGGCCCCATAT+GGG	0.577997	4.2:+43756068	MS.gene08713:CDS
TTCAGTGGGTGGCAATAACA+AGG	0.582915	4.2:+43756635	MS.gene08713:CDS
GGAGTAACAATTCCGGTGAT+CGG	0.585185	4.2:+43756685	MS.gene08713:CDS
GTAACAATTCCGGTGATCGG+AGG	0.587018	4.2:+43756688	MS.gene08713:CDS
AGAGCCGCTAACAAAATCCA+TGG	0.589500	4.2:+43756242	MS.gene08713:CDS
CAACACGACCCACAAGACAC+AGG	0.589564	4.2:-43756011	None:intergenic
ACAAGAGCTGGTCATTGAGA+GGG	0.590497	4.2:+43756446	MS.gene08713:CDS
CCGGTGATCGGAGGGATGAG+GGG	0.591100	4.2:+43756697	MS.gene08713:CDS
TCGCATGACTCTCATTCCCA+TGG	0.591516	4.2:+43756101	MS.gene08713:CDS
ACTATCAAATATGAGAAGCT+GGG	0.595181	4.2:+43756492	MS.gene08713:CDS
TAACAATTCCGGTGATCGGA+GGG	0.596600	4.2:+43756689	MS.gene08713:CDS
CTTCTCATCCATCAAACCAA+AGG	0.597380	4.2:-43756301	None:intergenic
ATGACTCTCATTCCCATGGA+AGG	0.602280	4.2:+43756105	MS.gene08713:CDS
ATAGATGGATCATAGGCGGC+CGG	0.605574	4.2:+43756664	MS.gene08713:CDS
TTGACGAGGACAACAACTAT+GGG	0.612941	4.2:+43756367	MS.gene08713:CDS
GCGGAGGTTTATGCGAATCA+GGG	0.618839	4.2:+43756395	MS.gene08713:CDS
AGGACAACAACTATGGGCCA+TGG	0.625182	4.2:+43756373	MS.gene08713:CDS
AATCAGGGTGGAAGTTGCGG+TGG	0.631003	4.2:+43756410	MS.gene08713:CDS
AGTGACAAGTTTGAAGAGGG+TGG	0.631762	4.2:+43756564	MS.gene08713:CDS
ATATTATTGTCTAGCAACCA+AGG	0.632535	4.2:-43756189	None:intergenic
GGTCATTGAGAGGGAAGAAG+GGG	0.637078	4.2:+43756455	MS.gene08713:CDS
GCGGAGAACAATTCAGTGGG+TGG	0.645235	4.2:+43756624	MS.gene08713:CDS
GAAATGGGGTCCTTTCCTCA+AGG	0.649606	4.2:+43756602	MS.gene08713:CDS
AAGGCGGAGAACAATTCAGT+GGG	0.653206	4.2:+43756621	MS.gene08713:CDS
CAAGGCGGAGAACAATTCAG+TGG	0.658129	4.2:+43756620	MS.gene08713:CDS
ATTCGCATAAACCTCCGCCA+TGG	0.672714	4.2:-43756390	None:intergenic
GATCACCGGAATTGTTACTC+CGG	0.672832	4.2:-43756683	None:intergenic
AATCTGTGCCCAGATTTCAG+TGG	0.674515	4.2:-43756268	None:intergenic
GAGAGCAGCAAGAAGAAATG+GGG	0.687018	4.2:+43756588	MS.gene08713:CDS
GAGGTTTATGCGAATCAGGG+TGG	0.688788	4.2:+43756398	MS.gene08713:CDS
GCGAATAGATGGATCATAGG+CGG	0.694958	4.2:+43756660	MS.gene08713:CDS
GAAGATGATCAAGTTTGACG+AGG	0.710658	4.2:+43756353	MS.gene08713:CDS
ACAACAACTATGGGCCATGG+CGG	0.721505	4.2:+43756376	MS.gene08713:CDS
ATGGGGTCCTTTCCTCAAGG+CGG	0.727413	4.2:+43756605	MS.gene08713:CDS
TCAATGTTAATTGATGGCTG+CGG	0.738137	4.2:+43756747	MS.gene08713:CDS
AGTGGGTGGCAATAACAAGG+AGG	0.756186	4.2:+43756638	MS.gene08713:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TAACATTGATTCATAATTAT+TGG	-	chr4.2:43756736-43756755	None:intergenic	15.0%
!!	TATGAATCAATGTTAATTGA+TGG	+	chr4.2:43756741-43756760	MS.gene08713:CDS	20.0%
	ACTATCAAATATGAGAAGCT+GGG	+	chr4.2:43756492-43756511	MS.gene08713:CDS	30.0%
	ATATTATTGTCTAGCAACCA+AGG	-	chr4.2:43756192-43756211	None:intergenic	30.0%
	CTTAGTCCAACTTTATTCTA+AGG	+	chr4.2:43756137-43756156	MS.gene08713:CDS	30.0%
	TAATATGATCATCCTGAAGA+AGG	+	chr4.2:43756206-43756225	MS.gene08713:CDS	30.0%
!	TTTTCCAGTCACAGATTATA+TGG	+	chr4.2:43756770-43756789	MS.gene08713:CDS	30.0%
!!	AAGAATTTGTTACCTTCCAT+GGG	-	chr4.2:43756120-43756139	None:intergenic	30.0%
!!	TAAGAATTTGTTACCTTCCA+TGG	-	chr4.2:43756121-43756140	None:intergenic	30.0%
!!!	GGTAAGTTTTGTTTTGTTTG+TGG	+	chr4.2:43756513-43756532	MS.gene08713:CDS	30.0%
!!!	TGTTTTGTTTGTGGCATAAT+AGG	+	chr4.2:43756522-43756541	MS.gene08713:CDS	30.0%
	GACTATCAAATATGAGAAGC+TGG	+	chr4.2:43756491-43756510	MS.gene08713:CDS	35.0%
	GATCTGCCTTAGAATAAAGT+TGG	-	chr4.2:43756146-43756165	None:intergenic	35.0%
	TCAAGAGTAGCCAAATGAAT+CGG	-	chr4.2:43756048-43756067	None:intergenic	35.0%
	TTCTCATCCATCAAACCAAA+GGG	-	chr4.2:43756303-43756322	None:intergenic	35.0%
	TTGAATCTTAACGCTGATCA+TGG	+	chr4.2:43755943-43755962	MS.gene08713:CDS	35.0%
!	ATGAGAGTCATGCGATATTT+TGG	-	chr4.2:43756096-43756115	None:intergenic	35.0%
!	TCAATGTTAATTGATGGCTG+CGG	+	chr4.2:43756747-43756766	MS.gene08713:CDS	35.0%
!!	ATTCTAAGGCAGATCTGAAA+AGG	+	chr4.2:43756151-43756170	MS.gene08713:CDS	35.0%
!!!	CGATATTTTGGTTCCCATAT+GGG	-	chr4.2:43756084-43756103	None:intergenic	35.0%
!!!	GATATTTTGGTTCCCATATG+GGG	-	chr4.2:43756083-43756102	None:intergenic	35.0%
	ATAACAAGGAGGCGAATAGA+TGG	+	chr4.2:43756649-43756668	MS.gene08713:CDS	40.0%
	CTTCTCATCCATCAAACCAA+AGG	-	chr4.2:43756304-43756323	None:intergenic	40.0%
	GAAGATGATCAAGTTTGACG+AGG	+	chr4.2:43756353-43756372	MS.gene08713:CDS	40.0%
	TGCAGTGACAAGTTTGAAGA+GGG	+	chr4.2:43756561-43756580	MS.gene08713:CDS	40.0%
	TTGACGAGGACAACAACTAT+GGG	+	chr4.2:43756367-43756386	MS.gene08713:CDS	40.0%
	TTTGACGAGGACAACAACTA+TGG	+	chr4.2:43756366-43756385	MS.gene08713:CDS	40.0%
!	ATGACCAGCTCTTGTTGTAA+TGG	-	chr4.2:43756441-43756460	None:intergenic	40.0%
!	GTGTCCATGGATTTTGTTAG+CGG	-	chr4.2:43756249-43756268	None:intergenic	40.0%
!!	CTTTGGTTTGATGGATGAGA+AGG	+	chr4.2:43756302-43756321	MS.gene08713:CDS	40.0%
!!!	GCGATATTTTGGTTCCCATA+TGG	-	chr4.2:43756085-43756104	None:intergenic	40.0%
	AACAAGAGCTGGTCATTGAG+AGG	+	chr4.2:43756445-43756464	MS.gene08713:CDS	45.0%
	AAGGCGGAGAACAATTCAGT+GGG	+	chr4.2:43756621-43756640	MS.gene08713:CDS	45.0%
	AATCTGTGCCCAGATTTCAG+TGG	-	chr4.2:43756271-43756290	None:intergenic	45.0%
	ACAAGAGCTGGTCATTGAGA+GGG	+	chr4.2:43756446-43756465	MS.gene08713:CDS	45.0%
	AGAGCCGCTAACAAAATCCA+TGG	+	chr4.2:43756242-43756261	MS.gene08713:CDS	45.0%
	AGCTCAGCTTGAGTGAGATT+CGG	-	chr4.2:43755985-43756004	None:intergenic	45.0%
	AGTGACAAGTTTGAAGAGGG+TGG	+	chr4.2:43756564-43756583	MS.gene08713:CDS	45.0%
	ATCCTGAAGAAGGTCGAGAT+TGG	+	chr4.2:43756216-43756235	MS.gene08713:CDS	45.0%
	ATGACTCTCATTCCCATGGA+AGG	+	chr4.2:43756105-43756124	MS.gene08713:CDS	45.0%
	CATGGACACCACTGAAATCT+GGG	+	chr4.2:43756260-43756279	MS.gene08713:CDS	45.0%
	CGAGAGCAGCAAGAAGAAAT+GGG	+	chr4.2:43756587-43756606	MS.gene08713:CDS	45.0%
	CTGCAGTGACAAGTTTGAAG+AGG	+	chr4.2:43756560-43756579	MS.gene08713:CDS	45.0%
	GAGAGCAGCAAGAAGAAATG+GGG	+	chr4.2:43756588-43756607	MS.gene08713:CDS	45.0%
	GAGGCGAATAGATGGATCAT+AGG	+	chr4.2:43756657-43756676	MS.gene08713:CDS	45.0%
	GATCACCGGAATTGTTACTC+CGG	-	chr4.2:43756686-43756705	None:intergenic	45.0%
	GCGAATAGATGGATCATAGG+CGG	+	chr4.2:43756660-43756679	MS.gene08713:CDS	45.0%
	GCGTCCATATAATCTGTGAC+TGG	-	chr4.2:43756777-43756796	None:intergenic	45.0%
	GGAGTAACAATTCCGGTGAT+CGG	+	chr4.2:43756685-43756704	MS.gene08713:CDS	45.0%
	TAACAATTCCGGTGATCGGA+GGG	+	chr4.2:43756689-43756708	MS.gene08713:CDS	45.0%
	TCAGCCATTACAACAAGAGC+TGG	+	chr4.2:43756434-43756453	MS.gene08713:CDS	45.0%
	TGGTCATTGAGAGGGAAGAA+GGG	+	chr4.2:43756454-43756473	MS.gene08713:CDS	45.0%
	TTCAGTGGGTGGCAATAACA+AGG	+	chr4.2:43756635-43756654	MS.gene08713:CDS	45.0%
!	GGTGAACAAGCCGATTCATT+TGG	+	chr4.2:43756035-43756054	MS.gene08713:CDS	45.0%
!	GGTTTGATGGATGAGAAGGT+TGG	+	chr4.2:43756306-43756325	MS.gene08713:CDS	45.0%
	ACAACAACTATGGGCCATGG+CGG	+	chr4.2:43756376-43756395	MS.gene08713:CDS	50.0%
	AGCTCTTGTTGGTACGCATG+TGG	+	chr4.2:43756329-43756348	MS.gene08713:CDS	50.0%
	AGGACAACAACTATGGGCCA+TGG	+	chr4.2:43756373-43756392	MS.gene08713:CDS	50.0%
	AGTGGGTGGCAATAACAAGG+AGG	+	chr4.2:43756638-43756657	MS.gene08713:CDS	50.0%
	ATAGATGGATCATAGGCGGC+CGG	+	chr4.2:43756664-43756683	MS.gene08713:CDS	50.0%
	ATTCGCATAAACCTCCGCCA+TGG	-	chr4.2:43756393-43756412	None:intergenic	50.0%
	CAAGGCGGAGAACAATTCAG+TGG	+	chr4.2:43756620-43756639	MS.gene08713:CDS	50.0%
	CAGATTCACCAACTGCCCTT+TGG	+	chr4.2:43756285-43756304	MS.gene08713:CDS	50.0%
	CCAGATTTCAGTGGTGTCCA+TGG	-	chr4.2:43756262-43756281	None:intergenic	50.0%
	CCATCAAACCAAAGGGCAGT+TGG	-	chr4.2:43756296-43756315	None:intergenic	50.0%
	CCATGGACACCACTGAAATC+TGG	+	chr4.2:43756259-43756278	MS.gene08713:CDS	50.0%
	CTCCAATCTCGACCTTCTTC+AGG	-	chr4.2:43756221-43756240	None:intergenic	50.0%
	CTCTTGTTGGTACGCATGTG+GGG	+	chr4.2:43756331-43756350	MS.gene08713:CDS	50.0%
	CTGAATTGTTCTCCGCCTTG+AGG	-	chr4.2:43756620-43756639	None:intergenic	50.0%
	CTGGTCATTGAGAGGGAAGA+AGG	+	chr4.2:43756453-43756472	MS.gene08713:CDS	50.0%
	GAAATGGGGTCCTTTCCTCA+AGG	+	chr4.2:43756602-43756621	MS.gene08713:CDS	50.0%
	GAGAAGGTTGGAGCTCTTGT+TGG	+	chr4.2:43756318-43756337	MS.gene08713:CDS	50.0%
	GAGGTTTATGCGAATCAGGG+TGG	+	chr4.2:43756398-43756417	MS.gene08713:CDS	50.0%
	GCGAGAGCAGCAAGAAGAAA+TGG	+	chr4.2:43756586-43756605	MS.gene08713:CDS	50.0%
	GCGGAGGTTTATGCGAATCA+GGG	+	chr4.2:43756395-43756414	MS.gene08713:CDS	50.0%
	GCTACTCTTGAGACCAGACT+TGG	+	chr4.2:43756057-43756076	MS.gene08713:CDS	50.0%
	GCTCTTGTTGGTACGCATGT+GGG	+	chr4.2:43756330-43756349	MS.gene08713:CDS	50.0%
	GGATTCTTGAACGCAGTCCT+TGG	+	chr4.2:43756172-43756191	MS.gene08713:CDS	50.0%
	GGTCATTGAGAGGGAAGAAG+GGG	+	chr4.2:43756455-43756474	MS.gene08713:CDS	50.0%
	GTAACAATTCCGGTGATCGG+AGG	+	chr4.2:43756688-43756707	MS.gene08713:CDS	50.0%
	TCGCATGACTCTCATTCCCA+TGG	+	chr4.2:43756101-43756120	MS.gene08713:CDS	50.0%
	TTGTTCTCCGCCTTGAGGAA+AGG	-	chr4.2:43756615-43756634	None:intergenic	50.0%
!!	CCAACTGCCCTTTGGTTTGA+TGG	+	chr4.2:43756293-43756312	MS.gene08713:CDS	50.0%
	AATCAGGGTGGAAGTTGCGG+TGG	+	chr4.2:43756410-43756429	MS.gene08713:CDS	55.0%
	AGACCAGACTTGGCCCCATA+TGG	+	chr4.2:43756067-43756086	MS.gene08713:CDS	55.0%
	ATGGGGTCCTTTCCTCAAGG+CGG	+	chr4.2:43756605-43756624	MS.gene08713:CDS	55.0%
	CAACACGACCCACAAGACAC+AGG	-	chr4.2:43756014-43756033	None:intergenic	55.0%
	CTGCTGGACCTGTGTCTTGT+GGG	+	chr4.2:43756003-43756022	MS.gene08713:CDS	55.0%
	GACCAGACTTGGCCCCATAT+GGG	+	chr4.2:43756068-43756087	MS.gene08713:CDS	55.0%
	GCGAATCAGGGTGGAAGTTG+CGG	+	chr4.2:43756407-43756426	MS.gene08713:CDS	55.0%
	GCGGAGAACAATTCAGTGGG+TGG	+	chr4.2:43756624-43756643	MS.gene08713:CDS	55.0%
	GGCGGAGGTTTATGCGAATC+AGG	+	chr4.2:43756394-43756413	MS.gene08713:CDS	55.0%
	GTGTCTTGTGGGTCGTGTTG+TGG	+	chr4.2:43756014-43756033	MS.gene08713:CDS	55.0%
	TCTCACTCAAGCTGAGCTGC+TGG	+	chr4.2:43755987-43756006	MS.gene08713:CDS	55.0%
	TTCCCATATGGGGCCAAGTC+TGG	-	chr4.2:43756073-43756092	None:intergenic	55.0%
	ACAACTATGGGCCATGGCGG+AGG	+	chr4.2:43756379-43756398	MS.gene08713:CDS	60.0%
	GCTGCTGGACCTGTGTCTTG+TGG	+	chr4.2:43756002-43756021	MS.gene08713:CDS	60.0%
	GGCGGCCGGAGTAACAATTC+CGG	+	chr4.2:43756678-43756697	MS.gene08713:CDS	60.0%
	TCCGGTGATCGGAGGGATGA+GGG	+	chr4.2:43756696-43756715	MS.gene08713:CDS	60.0%
	TTCCGGTGATCGGAGGGATG+AGG	+	chr4.2:43756695-43756714	MS.gene08713:CDS	60.0%
	CCCCTCATCCCTCCGATCAC+CGG	-	chr4.2:43756700-43756719	None:intergenic	65.0%
	CCGGTGATCGGAGGGATGAG+GGG	+	chr4.2:43756697-43756716	MS.gene08713:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	43755934	43756806	43755934	ID=MS.gene08713
chr4.2	mRNA	43755934	43756806	43755934	ID=MS.gene08713.t1;Parent=MS.gene08713
chr4.2	exon	43755934	43756806	43755934	ID=MS.gene08713.t1.exon1;Parent=MS.gene08713.t1
chr4.2	CDS	43755934	43756806	43755934	ID=cds.MS.gene08713.t1;Parent=MS.gene08713.t1

Gene Sequence

>MS.gene08713

ATGGAGAGCTTGAATCTTAACGCTGATCATGGAGCTGCTTCTCAAAGACCGAATCTCACTCAAGCTGAGCTGCTGGACCTGTGTCTTGTGGGTCGTGTTGTGGTGAACAAGCCGATTCATTTGGCTACTCTTGAGACCAGACTTGGCCCCATATGGGAACCAAAATATCGCATGACTCTCATTCCCATGGAAGGTAACAAATTCTTAGTCCAACTTTATTCTAAGGCAGATCTGAAAAGGATTCTTGAACGCAGTCCTTGGTTGCTAGACAATAATATGATCATCCTGAAGAAGGTCGAGATTGGAGAAGAGCCGCTAACAAAATCCATGGACACCACTGAAATCTGGGCACAGATTCACCAACTGCCCTTTGGTTTGATGGATGAGAAGGTTGGAGCTCTTGTTGGTACGCATGTGGGGAAGATGATCAAGTTTGACGAGGACAACAACTATGGGCCATGGCGGAGGTTTATGCGAATCAGGGTGGAAGTTGCGGTGGATCAGCCATTACAACAAGAGCTGGTCATTGAGAGGGAAGAAGGGGATAATATTCGACTGACTATCAAATATGAGAAGCTGGGTAAGTTTTGTTTTGTTTGTGGCATAATAGGTCACTCTGAAAGTTTCTGCAGTGACAAGTTTGAAGAGGGTGGCGAGAGCAGCAAGAAGAAATGGGGTCCTTTCCTCAAGGCGGAGAACAATTCAGTGGGTGGCAATAACAAGGAGGCGAATAGATGGATCATAGGCGGCCGGAGTAACAATTCCGGTGATCGGAGGGATGAGGGGACATCAATTAATGCCAATAATTATGAATCAATGTTAATTGATGGCTGCGGTTTTCCAGTCACAGATTATATGGACGCATTAAAGTGA

Protein sequence

>MS.gene08713.t1

MESLNLNADHGAASQRPNLTQAELLDLCLVGRVVVNKPIHLATLETRLGPIWEPKYRMTLIPMEGNKFLVQLYSKADLKRILERSPWLLDNNMIILKKVEIGEEPLTKSMDTTEIWAQIHQLPFGLMDEKVGALVGTHVGKMIKFDEDNNYGPWRRFMRIRVEVAVDQPLQQELVIEREEGDNIRLTIKYEKLGKFCFVCGIIGHSESFCSDKFEEGGESSKKKWGPFLKAENNSVGGNNKEANRWIIGGRSNNSGDRRDEGTSINANNYESMLIDGCGFPVTDYMDALK