AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36069

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36069.t1 MTR_3g053920 60.458 349 69 4 1 349 1 280 2.50e-129 378
MS.gene36069.t1 MTR_2g061500 90.698 129 12 0 1 129 1 129 2.23e-80 248
MS.gene36069.t1 MTR_8g463110 62.319 138 50 1 396 533 189 324 1.23e-52 190
MS.gene36069.t1 MTR_8g463110 60.526 114 43 1 292 403 1 114 4.11e-26 113
MS.gene36069.t1 MTR_4g103530 82.105 95 17 0 55 149 1 95 1.23e-50 172
MS.gene36069.t1 MTR_4g103530 46.269 67 33 1 251 317 119 182 5.56e-11 62.4
MS.gene36069.t1 MTR_6g034215 60.317 126 50 0 404 529 199 324 5.06e-48 169
MS.gene36069.t1 MTR_4g020630 55.725 131 58 0 403 533 130 260 6.00e-46 169
MS.gene36069.t1 MTR_7g011710 68.182 88 28 0 55 142 1 88 4.00e-36 132
MS.gene36069.t1 MTR_0010s0370 35.754 179 103 4 7 177 3 177 1.64e-29 115
MS.gene36069.t1 MTR_0010s0350 35.754 179 103 4 7 177 3 177 1.64e-29 115
MS.gene36069.t1 MTR_6g033215 30.636 173 118 1 29 199 122 294 7.03e-28 113
MS.gene36069.t1 MTR_3g044860 42.975 121 43 1 404 524 87 181 1.85e-27 112
MS.gene36069.t1 MTR_1g100687 44.444 99 55 0 404 502 133 231 8.95e-25 103
MS.gene36069.t1 MTR_7g063500 50.769 65 32 0 469 533 38 102 1.45e-17 79.3
MS.gene36069.t1 MTR_1g051330 31.967 122 78 2 403 522 349 467 1.25e-14 77.4
MS.gene36069.t1 MTR_0042s0130 34.409 93 61 0 404 496 234 326 3.56e-13 71.2
MS.gene36069.t1 MTR_6g009010 43.284 67 38 0 399 465 197 263 6.23e-13 69.3
MS.gene36069.t1 MTR_1g036720 33.010 103 69 0 11 113 9 111 1.27e-12 64.7
MS.gene36069.t1 MTR_7g089990 36.111 108 65 2 106 209 86 193 2.05e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36069.t1 AT2G17920 26.636 214 149 5 8 216 9 219 2.01e-19 89.7
MS.gene36069.t1 AT3G57587 29.577 142 96 2 77 216 80 219 2.65e-17 84.0
MS.gene36069.t1 AT5G36228 26.943 193 135 4 36 225 39 228 6.82e-16 79.7
MS.gene36069.t1 AT2G41590 29.375 160 99 4 67 216 64 219 1.07e-15 79.3
MS.gene36069.t1 AT2G13450 26.630 184 129 4 35 215 38 218 5.93e-15 77.4
MS.gene36069.t1 AT3G47920 30.070 143 94 3 77 216 9 148 1.35e-14 75.1
MS.gene36069.t1 AT3G31430 27.473 182 126 3 36 215 134 311 3.13e-14 74.3
MS.gene36069.t1 AT5G25200 25.114 219 146 5 8 216 9 219 1.04e-13 73.2
MS.gene36069.t1 AT5G18636 25.114 219 146 5 8 216 9 219 1.11e-13 73.2
MS.gene36069.t1 AT2G02103 26.455 189 123 4 36 216 39 219 1.11e-13 73.6
MS.gene36069.t1 AT4G02000 26.471 136 96 2 83 216 6 139 9.01e-12 66.6

Find 142 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTCAACCATATCGATTTC+TGG 0.125233 8.1:+52927213 MS.gene36069:CDS
TCCGCACATAAAGATAATTT+TGG 0.185901 8.1:-52928993 None:intergenic
GCAACTTGAACCAGGGTTTA+AGG 0.248362 8.1:+52928923 MS.gene36069:CDS
AGACATACGCTCGCTAAAAT+AGG 0.267169 8.1:-52927012 None:intergenic
CAGGTTCAGACTCTAGGTTT+AGG 0.286511 8.1:-52926923 None:intergenic
AGGTTCAGACTCTAGGTTTA+GGG 0.291493 8.1:-52926922 None:intergenic
TCGAGGACAACAGCTGTTTC+AGG 0.292775 8.1:-52926942 None:intergenic
TCATTGTAACAAACTGAAAA+AGG 0.295822 8.1:+52929040 MS.gene36069:CDS
AAATACGGCTGCATGCTTTC+GGG 0.306321 8.1:+52929093 MS.gene36069:CDS
CAAGTACATGGTTTGCCCTT+TGG 0.320210 8.1:+52927239 MS.gene36069:CDS
ATTTGCTGCTGATGGGGTTA+TGG 0.324485 8.1:+52928027 MS.gene36069:CDS
CAAGGTCTAGGCAATTTCTT+AGG 0.332204 8.1:+52927284 MS.gene36069:CDS
TGGTTGAGTGGAACAAAGTT+TGG 0.333722 8.1:-52927200 None:intergenic
GAAATACGGCTGCATGCTTT+CGG 0.334143 8.1:+52929092 MS.gene36069:CDS
CATCAACCTTGTGATGGAAT+TGG 0.340552 8.1:-52927097 None:intergenic
TGCTTGCAAAGTGCAACTTC+TGG 0.364327 8.1:+52927835 MS.gene36069:CDS
CCTAGACCTTGACCTACTTT+CGG 0.370213 8.1:-52927272 None:intergenic
CTGATGATGGAGTTCGTAAT+TGG 0.376569 8.1:+52927534 MS.gene36069:CDS
AGCAATAACATCTTGTTTCA+TGG 0.382000 8.1:-52927768 None:intergenic
TTTGCTGCTGATGGGGTTAT+GGG 0.393203 8.1:+52928028 MS.gene36069:CDS
TGAACATAAGGCCGAGGTAT+AGG 0.397346 8.1:-52928870 None:intergenic
GTACCAATCTTGTTTGTAAC+CGG 0.397690 8.1:-52927572 None:intergenic
CGACACACCTGCTGCTGGTA+CGG 0.398473 8.1:+52927691 MS.gene36069:CDS
GCTCGCTAAAATAGGCAAAC+TGG 0.400227 8.1:-52927004 None:intergenic
GTCCTCGAGCACTGTCTCAT+TGG 0.404666 8.1:+52926957 MS.gene36069:CDS
AGCAACTTTGATTCGCATAT+AGG 0.406749 8.1:-52927348 None:intergenic
GCGCAACATTTACAAGTATA+GGG 0.410752 8.1:-52928848 None:intergenic
GTTATGGGAAACGATGTAAT+AGG 0.414232 8.1:+52928043 MS.gene36069:CDS
TGCCACCGGTAGCGTTGGTT+TGG 0.415276 8.1:-52927646 None:intergenic
ACTCAACCATATCGATTTCT+GGG 0.418026 8.1:+52927214 MS.gene36069:CDS
GCCATCGAGATTGAGATGAT+TGG 0.418371 8.1:-52926874 None:intergenic
GTTTAGGGTTAAACCTTCCT+TGG 0.420657 8.1:-52926907 None:intergenic
CTTGAACCCAGAAATCGATA+TGG 0.429812 8.1:-52927220 None:intergenic
AAGCCGGTTACAAACAAGAT+TGG 0.430548 8.1:+52927569 MS.gene36069:CDS
AACCTTCCTTGGACAAAGTC+AGG 0.435096 8.1:-52926896 None:intergenic
GGCGCAACATTTACAAGTAT+AGG 0.441952 8.1:-52928849 None:intergenic
AAGATATGTGGGAGTGGAAG+AGG 0.442092 8.1:+52929015 MS.gene36069:CDS
CCATCGAGATTGAGATGATT+GGG 0.442926 8.1:-52926873 None:intergenic
TTTAGCGCGTTGACGCCAAT+AGG 0.444632 8.1:-52929180 None:intergenic
GGTTGAGTGGAACAAAGTTT+GGG 0.448549 8.1:-52927199 None:intergenic
CTGTTTCAGGTTCAGACTCT+AGG 0.449630 8.1:-52926929 None:intergenic
GATTTCTGGGTTCAAGTACA+TGG 0.450772 8.1:+52927227 MS.gene36069:CDS
ATGTCTCGTGCTTGGAAGCC+AGG 0.453399 8.1:+52927029 MS.gene36069:CDS
GCAGGTGTGTCGCAGCCAAC+AGG 0.454821 8.1:-52927680 None:intergenic
GCGTGGCACAGATGCGGGAA+TGG 0.459420 8.1:-52927624 None:intergenic
CGTGGCACAGATGCGGGAAT+GGG 0.459797 8.1:-52927623 None:intergenic
GTATTTCTTGCAAATCCTTA+CGG 0.462384 8.1:-52929076 None:intergenic
CAAAATCTCCATTGCTTGCA+CGG 0.464881 8.1:-52927409 None:intergenic
CTTTATGTGCGGAAGATATG+TGG 0.467846 8.1:+52929003 MS.gene36069:CDS
GTAATCGTAACCCGTTTGCC+TGG 0.474934 8.1:-52927047 None:intergenic
CAACTCCGGGCAAACTTTGT+CGG 0.474938 8.1:-52927498 None:intergenic
CGTATGTTTGCCCTTCAGAA+TGG 0.478574 8.1:+52927998 MS.gene36069:CDS
GACCTTGACCTACTTTCGGC+TGG 0.478639 8.1:-52927268 None:intergenic
GACACACCTGCTGCTGGTAC+GGG 0.481544 8.1:+52927692 MS.gene36069:CDS
TGCTTGGAAGCCAGGCAAAC+GGG 0.486334 8.1:+52927037 MS.gene36069:CDS
AAATGTCGTTTATGAACATA+AGG 0.487242 8.1:-52928882 None:intergenic
GTGCTTGGAAGCCAGGCAAA+CGG 0.488618 8.1:+52927036 MS.gene36069:CDS
GGATTTATCCAGCCGAAAGT+AGG 0.490851 8.1:+52927260 MS.gene36069:CDS
TGTTACAGGTGTGGTTTACT+CGG 0.492919 8.1:+52927470 MS.gene36069:CDS
TTTGAATTAGAAGCTGATGA+TGG 0.493558 8.1:+52927521 MS.gene36069:CDS
GACGCCAATAGGCATCATCT+TGG 0.494095 8.1:-52929169 None:intergenic
GGCACTGCTGCTGTTCCTGT+TGG 0.495949 8.1:+52927665 MS.gene36069:CDS
GTTTGGCGTGGCACAGATGC+GGG 0.496148 8.1:-52927629 None:intergenic
GGCTGCGACACACCTGCTGC+TGG 0.501159 8.1:+52927686 MS.gene36069:CDS
TGATTCGCATATAGGAGCTA+TGG 0.502578 8.1:-52927340 None:intergenic
CCAGGTCACCCTCTAGTGCT+TGG 0.504930 8.1:+52927896 MS.gene36069:CDS
CTTCTAATTCAAACAACTCC+GGG 0.508006 8.1:-52927511 None:intergenic
GCGAGCGTATGTCTCGTGCT+TGG 0.508528 8.1:+52927021 MS.gene36069:CDS
TGGCGTGTCCGTGCAAGCAA+TGG 0.508814 8.1:+52927401 MS.gene36069:CDS
CTTCTGGCTTCCTCCTCTAC+AGG 0.515293 8.1:+52927851 MS.gene36069:CDS
ACACGCCATGCTTTCTTCAA+AGG 0.515874 8.1:-52927386 None:intergenic
ACGCCAATAGGCATCATCTT+GGG 0.519719 8.1:-52929168 None:intergenic
CTTGTTTCATGGCAGTGAGT+TGG 0.520187 8.1:-52927757 None:intergenic
GTTTGTGACTGAAAATAATG+AGG 0.521834 8.1:+52927934 MS.gene36069:CDS
GTAAGGATTTGCAAGAAATA+CGG 0.525117 8.1:+52929078 MS.gene36069:CDS
AATGCGTGGCAACTTGAACC+AGG 0.526336 8.1:+52928915 MS.gene36069:CDS
ACAAAGTTTGGGACGACACC+AGG 0.526984 8.1:-52927188 None:intergenic
AGAGTTCCCGTACCAGCAGC+AGG 0.528144 8.1:-52927698 None:intergenic
TGTCCCAAGATGATGCCTAT+TGG 0.530531 8.1:+52929165 MS.gene36069:CDS
GGAGAACCATTTGCTGCTGA+TGG 0.530868 8.1:+52928019 MS.gene36069:CDS
AGCAGTGCCACCGGTAGCGT+TGG 0.533603 8.1:-52927651 None:intergenic
CCGAAAGTAGGTCAAGGTCT+AGG 0.534102 8.1:+52927272 MS.gene36069:CDS
AGGAGCTAGTTACTAACTCA+TGG 0.534186 8.1:+52928943 MS.gene36069:CDS
GGCCTGACTTTGTCCAAGGA+AGG 0.537573 8.1:+52926894 MS.gene36069:CDS
GGTTTGGCGTGGCACAGATG+CGG 0.539101 8.1:-52927630 None:intergenic
ATGCGTGGCAACTTGAACCA+GGG 0.540044 8.1:+52928916 MS.gene36069:CDS
AATACGGCTGCATGCTTTCG+GGG 0.542588 8.1:+52929094 MS.gene36069:CDS
CCACGCCAAACCAACGCTAC+CGG 0.545069 8.1:+52927641 MS.gene36069:CDS
GTAACTAGCTCCTTAAACCC+TGG 0.545129 8.1:-52928933 None:intergenic
ATAACCCCATCAGCAGCAAA+TGG 0.547713 8.1:-52928025 None:intergenic
GCTTCTAATTCAAACAACTC+CGG 0.548249 8.1:-52927512 None:intergenic
CAAATGGTTCTCCATTCTGA+AGG 0.549071 8.1:-52928009 None:intergenic
GAGAACCATTTGCTGCTGAT+GGG 0.549512 8.1:+52928020 MS.gene36069:CDS
GTCAACGCGCTAAAACTCAT+TGG 0.549620 8.1:+52929189 MS.gene36069:CDS
TCAGTCACAAACGGAACAGC+AGG 0.551036 8.1:-52927923 None:intergenic
GCCAAAATTATCTTTATGTG+CGG 0.551955 8.1:+52928992 MS.gene36069:CDS
ACATACCGACAAAGTTTGCC+CGG 0.560339 8.1:+52927493 MS.gene36069:CDS
TCATGGCAGTGAGTTGGTGT+TGG 0.562364 8.1:-52927751 None:intergenic
TTGGCGAGCTGACTTTAAGC+CGG 0.562383 8.1:+52927553 MS.gene36069:CDS
GGAACCCTAAAAGCTTATGA+TGG 0.567995 8.1:+52927305 MS.gene36069:CDS
GCTAGTTACTAACTCATGGC+AGG 0.568345 8.1:+52928947 MS.gene36069:CDS
CCGGTAGCGTTGGTTTGGCG+TGG 0.569630 8.1:-52927641 None:intergenic
CGTTTATGAACATAAGGCCG+AGG 0.578412 8.1:-52928876 None:intergenic
TTCGGCTGGATAAATCCAAA+GGG 0.578555 8.1:-52927254 None:intergenic
CGATGGCCTGACTTTGTCCA+AGG 0.579852 8.1:+52926890 MS.gene36069:CDS
GGCCGAAGTTCCTGTAGAGG+AGG 0.583182 8.1:-52927861 None:intergenic
AGAGGCCGAAGTTCCTGTAG+AGG 0.584110 8.1:-52927864 None:intergenic
CCAAGCACTAGAGGGTGACC+TGG 0.585945 8.1:-52927896 None:intergenic
GGATATTGAAGATTGCCGTA+AGG 0.588364 8.1:+52929061 MS.gene36069:CDS
CTGTGCCTTTGAAGAAAGCA+TGG 0.589691 8.1:+52927381 MS.gene36069:CDS
CCCAATCATCTCAATCTCGA+TGG 0.589868 8.1:+52926873 MS.gene36069:CDS
GTGCGGAAGATATGTGGGAG+TGG 0.590594 8.1:+52929009 MS.gene36069:CDS
TTTCGGCTGGATAAATCCAA+AGG 0.590698 8.1:-52927255 None:intergenic
TAAATGTTGCGCCTATACCT+CGG 0.593763 8.1:+52928859 MS.gene36069:CDS
CGCCAAACCAACGCTACCGG+TGG 0.594088 8.1:+52927644 MS.gene36069:CDS
TACAAGTATAGGGTAGTGAT+CGG 0.595215 8.1:-52928838 None:intergenic
TGAAAATTGTCATACAACCA+TGG 0.596313 8.1:-52927143 None:intergenic
TTCCTCCTCTACAGGAACTT+CGG 0.598229 8.1:+52927859 MS.gene36069:CDS
ATAGGGTAGTGATCGGAAGT+AGG 0.599647 8.1:-52928831 None:intergenic
AGGAACAGCAGCAGTGCCAC+CGG 0.600073 8.1:-52927660 None:intergenic
GCAGGTAAACCAAGCACTAG+AGG 0.606008 8.1:-52927905 None:intergenic
TTTGTTCCAATTCCATCACA+AGG 0.609518 8.1:+52927091 MS.gene36069:CDS
GGGATCTTGTAGCCAGCGGT+TGG 0.610642 8.1:-52927603 None:intergenic
GGTTTGCATCAACCTTGTGA+TGG 0.614426 8.1:-52927103 None:intergenic
TCGGCCTCTAGTTTACTACC+AGG 0.616126 8.1:+52927878 MS.gene36069:CDS
TTTATGTGCGGAAGATATGT+GGG 0.619461 8.1:+52929004 MS.gene36069:CDS
AATGCATGAGGACAATGGCT+CGG 0.619974 8.1:+52927958 MS.gene36069:CDS
GAGGAAATGCATGAGGACAA+TGG 0.625072 8.1:+52927953 MS.gene36069:CDS
AGGAGCTATGGATTAAGTTG+CGG 0.627125 8.1:-52927328 None:intergenic
GTCATGGATCGAATCTCACC+TGG 0.627964 8.1:+52927170 MS.gene36069:CDS
ATGGACCTTCCTCTAAAACA+TGG 0.632613 8.1:-52927124 None:intergenic
ATCCAGCCGAAAGTAGGTCA+AGG 0.636561 8.1:+52927266 MS.gene36069:CDS
GTACTGCTACTACCAACCGC+TGG 0.637769 8.1:+52927591 MS.gene36069:CDS
CAGGTAAACCAAGCACTAGA+GGG 0.638058 8.1:-52927904 None:intergenic
GACCAATGAGACAGTGCTCG+AGG 0.641708 8.1:-52926959 None:intergenic
AAATGGTTCTCCATTCTGAA+GGG 0.641917 8.1:-52928008 None:intergenic
AGAACCATTTGCTGCTGATG+GGG 0.656189 8.1:+52928021 MS.gene36069:CDS
GTTGTCTAAGCTCAAGCATG+CGG 0.662327 8.1:-52929127 None:intergenic
CAGAAATCGATATGGTTGAG+TGG 0.664176 8.1:-52927212 None:intergenic
GTGACCTGGTAGTAAACTAG+AGG 0.666776 8.1:-52927882 None:intergenic
AAATAATGAGGAAATGCATG+AGG 0.673051 8.1:+52927946 MS.gene36069:CDS
GAATGGGATCTTGTAGCCAG+CGG 0.693805 8.1:-52927607 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTAAATATGAGAAATT+GGG + chr8.1:52927440-52927459 MS.gene36069:CDS 10.0%
!!! TAATTTTAAATATGAGAAAT+TGG + chr8.1:52927439-52927458 MS.gene36069:CDS 10.0%
! GAAATTGTAAATAATGCTCT+TGG + chr8.1:52928443-52928462 MS.gene36069:intron 25.0%
! TCATTGTAACAAACTGAAAA+AGG + chr8.1:52929040-52929059 MS.gene36069:CDS 25.0%
!! AAATGTCGTTTATGAACATA+AGG - chr8.1:52928885-52928904 None:intergenic 25.0%
!! TCATTATTTTCAGTCACAAA+CGG - chr8.1:52927935-52927954 None:intergenic 25.0%
!! TGACAATTTTCATATTGTCA+TGG + chr8.1:52927154-52927173 MS.gene36069:CDS 25.0%
AAAATTGAGTGGAAAGTTGT+CGG - chr8.1:52928538-52928557 None:intergenic 30.0%
AAATAATGAGGAAATGCATG+AGG + chr8.1:52927946-52927965 MS.gene36069:CDS 30.0%
ACATCTTTCTCATCAAACAA+AGG - chr8.1:52928118-52928137 None:intergenic 30.0%
AGTTATTATGGCTATCCTAA+TGG + chr8.1:52928482-52928501 MS.gene36069:intron 30.0%
ATAGGAACAAATGTTAGTCA+TGG + chr8.1:52928061-52928080 MS.gene36069:intron 30.0%
ATTAGGATAGCCATAATAAC+TGG - chr8.1:52928483-52928502 None:intergenic 30.0%
GCCAAAATTATCTTTATGTG+CGG + chr8.1:52928992-52929011 MS.gene36069:CDS 30.0%
GCTCACTGAAATAAAATTGA+AGG + chr8.1:52928287-52928306 MS.gene36069:intron 30.0%
GTAAGGATTTGCAAGAAATA+CGG + chr8.1:52929078-52929097 MS.gene36069:CDS 30.0%
GTATTTCTTGCAAATCCTTA+CGG - chr8.1:52929079-52929098 None:intergenic 30.0%
GTTTGATGAGAAAGATGTAA+TGG + chr8.1:52928120-52928139 MS.gene36069:intron 30.0%
GTTTGTGACTGAAAATAATG+AGG + chr8.1:52927934-52927953 MS.gene36069:CDS 30.0%
TAAATAATGCTCTTGGTACT+TGG + chr8.1:52928450-52928469 MS.gene36069:intron 30.0%
TAGGAACAAATGTTAGTCAT+GGG + chr8.1:52928062-52928081 MS.gene36069:intron 30.0%
TGAAAATTGTCATACAACCA+TGG - chr8.1:52927146-52927165 None:intergenic 30.0%
TTTGAATTAGAAGCTGATGA+TGG + chr8.1:52927521-52927540 MS.gene36069:CDS 30.0%
! AGCAATAACATCTTGTTTCA+TGG - chr8.1:52927771-52927790 None:intergenic 30.0%
! ATTTTCGTTATGAAAATGCG+TGG + chr8.1:52928901-52928920 MS.gene36069:CDS 30.0%
! TCCGCACATAAAGATAATTT+TGG - chr8.1:52928996-52929015 None:intergenic 30.0%
!!! AATTGGGTGTTTTTTGTTAC+AGG + chr8.1:52927456-52927475 MS.gene36069:CDS 30.0%
!!! TGCAAAGTTTTTTCATGTCT+CGG + chr8.1:52929232-52929251 MS.gene36069:intron 30.0%
AAAACTCATTGGTACAAGGA+TGG + chr8.1:52929200-52929219 MS.gene36069:intron 35.0%
AAATGGTTCTCCATTCTGAA+GGG - chr8.1:52928011-52928030 None:intergenic 35.0%
AATGCAGCACATGCTAAAAA+AGG + chr8.1:52927797-52927816 MS.gene36069:CDS 35.0%
AGAGTCTCAACAATAGCATT+TGG - chr8.1:52928804-52928823 None:intergenic 35.0%
AGGAACAAATGTTAGTCATG+GGG + chr8.1:52928063-52928082 MS.gene36069:intron 35.0%
CTTCTAATTCAAACAACTCC+GGG - chr8.1:52927514-52927533 None:intergenic 35.0%
GCGCAACATTTACAAGTATA+GGG - chr8.1:52928851-52928870 None:intergenic 35.0%
GCTTCTAATTCAAACAACTC+CGG - chr8.1:52927515-52927534 None:intergenic 35.0%
GTTATGGGAAACGATGTAAT+AGG + chr8.1:52928043-52928062 MS.gene36069:CDS 35.0%
TACAAGTATAGGGTAGTGAT+CGG - chr8.1:52928841-52928860 None:intergenic 35.0%
TATACTTGGTTCCAAAGTCT+TGG + chr8.1:52928711-52928730 MS.gene36069:intron 35.0%
TATTATGGCTATCCTAATGG+AGG + chr8.1:52928485-52928504 MS.gene36069:intron 35.0%
TGGATGCAAGTTAGAAAAGA+GGG + chr8.1:52928598-52928617 MS.gene36069:intron 35.0%
TTGAAGGATACCCATATACT+TGG + chr8.1:52928697-52928716 MS.gene36069:intron 35.0%
TTGGATGCAAGTTAGAAAAG+AGG + chr8.1:52928597-52928616 MS.gene36069:intron 35.0%
TTTATGTGCGGAAGATATGT+GGG + chr8.1:52929004-52929023 MS.gene36069:CDS 35.0%
TTTGTTCCAATTCCATCACA+AGG + chr8.1:52927091-52927110 MS.gene36069:CDS 35.0%
! AGCAACTTTGATTCGCATAT+AGG - chr8.1:52927351-52927370 None:intergenic 35.0%
! ATATGCGGTTTTCCTTTTTC+CGG - chr8.1:52929265-52929284 None:intergenic 35.0%
! CAACTTTCCACTCAATTTTC+AGG + chr8.1:52928539-52928558 MS.gene36069:intron 35.0%
! GCGCACTTGCTAATAATTTA+TGG + chr8.1:52928766-52928785 MS.gene36069:intron 35.0%
! GTACCAATCTTGTTTGTAAC+CGG - chr8.1:52927575-52927594 None:intergenic 35.0%
! TTTAGCATGTGCTGCATTTT+GGG - chr8.1:52927795-52927814 None:intergenic 35.0%
! TTTTAGCATGTGCTGCATTT+TGG - chr8.1:52927796-52927815 None:intergenic 35.0%
!! ACTCAACCATATCGATTTCT+GGG + chr8.1:52927214-52927233 MS.gene36069:CDS 35.0%
!! AGACTTTGGAACCAAGTATA+TGG - chr8.1:52928711-52928730 None:intergenic 35.0%
!! GACTTTGGAACCAAGTATAT+GGG - chr8.1:52928710-52928729 None:intergenic 35.0%
!! TGATGCAAACCATGTTTTAG+AGG + chr8.1:52927115-52927134 MS.gene36069:CDS 35.0%
!!! GAAGGACTTCGTTTTTTGAT+TGG + chr8.1:52928305-52928324 MS.gene36069:intron 35.0%
AACAAATGTTAGTCATGGGG+GGG + chr8.1:52928066-52928085 MS.gene36069:intron 40.0%
AAGCCGGTTACAAACAAGAT+TGG + chr8.1:52927569-52927588 MS.gene36069:CDS 40.0%
AATCGCCGAAAAATACACCA+CGG - chr8.1:52928566-52928585 None:intergenic 40.0%
AGACATACGCTCGCTAAAAT+AGG - chr8.1:52927015-52927034 None:intergenic 40.0%
AGGAGCTAGTTACTAACTCA+TGG + chr8.1:52928943-52928962 MS.gene36069:CDS 40.0%
AGGTTCAGACTCTAGGTTTA+GGG - chr8.1:52926925-52926944 None:intergenic 40.0%
CAAAATCTCCATTGCTTGCA+CGG - chr8.1:52927412-52927431 None:intergenic 40.0%
CAAATGGTTCTCCATTCTGA+AGG - chr8.1:52928012-52928031 None:intergenic 40.0%
CAAGGTCTAGGCAATTTCTT+AGG + chr8.1:52927284-52927303 MS.gene36069:CDS 40.0%
CAGAAATCGATATGGTTGAG+TGG - chr8.1:52927215-52927234 None:intergenic 40.0%
CCAAAATAAAGCTAAACCCC+CGG - chr8.1:52928369-52928388 None:intergenic 40.0%
CCATCGAGATTGAGATGATT+GGG - chr8.1:52926876-52926895 None:intergenic 40.0%
CGAAAGCCATTTATAAGCCA+AGG - chr8.1:52928639-52928658 None:intergenic 40.0%
CGCTAAAACTCATTGGTACA+AGG + chr8.1:52929196-52929215 MS.gene36069:intron 40.0%
CTTGAACCCAGAAATCGATA+TGG - chr8.1:52927223-52927242 None:intergenic 40.0%
CTTTATGTGCGGAAGATATG+TGG + chr8.1:52929003-52929022 MS.gene36069:CDS 40.0%
GAACAAATGTTAGTCATGGG+GGG + chr8.1:52928065-52928084 MS.gene36069:intron 40.0%
GAGTCTCACTAAGGAACAAA+AGG - chr8.1:52928265-52928284 None:intergenic 40.0%
GATGAGAAAGATGTAATGGC+AGG + chr8.1:52928124-52928143 MS.gene36069:intron 40.0%
GGAACAAATGTTAGTCATGG+GGG + chr8.1:52928064-52928083 MS.gene36069:intron 40.0%
GGAACCCTAAAAGCTTATGA+TGG + chr8.1:52927305-52927324 MS.gene36069:CDS 40.0%
GGATATTGAAGATTGCCGTA+AGG + chr8.1:52929061-52929080 MS.gene36069:CDS 40.0%
GGCGCAACATTTACAAGTAT+AGG - chr8.1:52928852-52928871 None:intergenic 40.0%
GGTTGAGTGGAACAAAGTTT+GGG - chr8.1:52927202-52927221 None:intergenic 40.0%
GTATATGGGTATCCTTCAAC+CGG - chr8.1:52928696-52928715 None:intergenic 40.0%
TAAATGTTGCGCCTATACCT+CGG + chr8.1:52928859-52928878 MS.gene36069:CDS 40.0%
TATATGGGTATCCTTCAACC+GGG - chr8.1:52928695-52928714 None:intergenic 40.0%
TCACTAAGGAACAAAAGGTC+CGG - chr8.1:52928260-52928279 None:intergenic 40.0%
TGATTCGCATATAGGAGCTA+TGG - chr8.1:52927343-52927362 None:intergenic 40.0%
TGGCGACTTACCAGTTATTA+TGG + chr8.1:52928470-52928489 MS.gene36069:intron 40.0%
TGGTTGAGTGGAACAAAGTT+TGG - chr8.1:52927203-52927222 None:intergenic 40.0%
TGTTACAGGTGTGGTTTACT+CGG + chr8.1:52927470-52927489 MS.gene36069:CDS 40.0%
TTCGGCTGGATAAATCCAAA+GGG - chr8.1:52927257-52927276 None:intergenic 40.0%
TTGTCGGAGAAAATTCCAAG+CGG - chr8.1:52928522-52928541 None:intergenic 40.0%
TTTCGGCTGGATAAATCCAA+AGG - chr8.1:52927258-52927277 None:intergenic 40.0%
! AGGAGCTATGGATTAAGTTG+CGG - chr8.1:52927331-52927350 None:intergenic 40.0%
! CATCAACCTTGTGATGGAAT+TGG - chr8.1:52927100-52927119 None:intergenic 40.0%
! CATCATCAAGAGAGCATATG+CGG - chr8.1:52929280-52929299 None:intergenic 40.0%
! GATTTCTGGGTTCAAGTACA+TGG + chr8.1:52927227-52927246 MS.gene36069:CDS 40.0%
! GTTTAGGGTTAAACCTTCCT+TGG - chr8.1:52926910-52926929 None:intergenic 40.0%
! TATGCGGTTTTCCTTTTTCC+GGG - chr8.1:52929264-52929283 None:intergenic 40.0%
!! ATGGACCTTCCTCTAAAACA+TGG - chr8.1:52927127-52927146 None:intergenic 40.0%
!! CACTCAACCATATCGATTTC+TGG + chr8.1:52927213-52927232 MS.gene36069:CDS 40.0%
!! CGGCGATTTTAACGACATTT+TGG + chr8.1:52928578-52928597 MS.gene36069:intron 40.0%
!! CTGATGATGGAGTTCGTAAT+TGG + chr8.1:52927534-52927553 MS.gene36069:CDS 40.0%
!! TGCTCTCTTGATGATGATGT+AGG + chr8.1:52929284-52929303 MS.gene36069:intron 40.0%
!!! ATGTTTTAGAGGAAGGTCCA+TGG + chr8.1:52927126-52927145 MS.gene36069:CDS 40.0%
!!! GCAAACCATGTTTTAGAGGA+AGG + chr8.1:52927119-52927138 MS.gene36069:CDS 40.0%
!!! GGTGTTTTTTGTTACAGGTG+TGG + chr8.1:52927461-52927480 MS.gene36069:CDS 40.0%
AAATACGGCTGCATGCTTTC+GGG + chr8.1:52929093-52929112 MS.gene36069:CDS 45.0%
AACCTTCCTTGGACAAAGTC+AGG - chr8.1:52926899-52926918 None:intergenic 45.0%
AAGATATGTGGGAGTGGAAG+AGG + chr8.1:52929015-52929034 MS.gene36069:CDS 45.0%
AATGCATGAGGACAATGGCT+CGG + chr8.1:52927958-52927977 MS.gene36069:CDS 45.0%
ACACGCCATGCTTTCTTCAA+AGG - chr8.1:52927389-52927408 None:intergenic 45.0%
ACATACCGACAAAGTTTGCC+CGG + chr8.1:52927493-52927512 MS.gene36069:CDS 45.0%
ACGCCAATAGGCATCATCTT+GGG - chr8.1:52929171-52929190 None:intergenic 45.0%
AGTGAGCTAGAGTCTCACTA+AGG - chr8.1:52928274-52928293 None:intergenic 45.0%
ATAACCCCATCAGCAGCAAA+TGG - chr8.1:52928028-52928047 None:intergenic 45.0%
ATAGGGTAGTGATCGGAAGT+AGG - chr8.1:52928834-52928853 None:intergenic 45.0%
CAGGTAAACCAAGCACTAGA+GGG - chr8.1:52927907-52927926 None:intergenic 45.0%
CAGGTTCAGACTCTAGGTTT+AGG - chr8.1:52926926-52926945 None:intergenic 45.0%
CCAGACCTAAGTACCTAGTT+CGG + chr8.1:52928225-52928244 MS.gene36069:intron 45.0%
CCCAATCATCTCAATCTCGA+TGG + chr8.1:52926873-52926892 MS.gene36069:CDS 45.0%
CCTAGACCTTGACCTACTTT+CGG - chr8.1:52927275-52927294 None:intergenic 45.0%
CGCTCTCCTTGGCTTATAAA+TGG + chr8.1:52928630-52928649 MS.gene36069:intron 45.0%
CGTATGTTTGCCCTTCAGAA+TGG + chr8.1:52927998-52928017 MS.gene36069:CDS 45.0%
CGTTTATGAACATAAGGCCG+AGG - chr8.1:52928879-52928898 None:intergenic 45.0%
CTTGTTTCATGGCAGTGAGT+TGG - chr8.1:52927760-52927779 None:intergenic 45.0%
GAAATACGGCTGCATGCTTT+CGG + chr8.1:52929092-52929111 MS.gene36069:CDS 45.0%
GAGGAAATGCATGAGGACAA+TGG + chr8.1:52927953-52927972 MS.gene36069:CDS 45.0%
GCAACTTGAACCAGGGTTTA+AGG + chr8.1:52928923-52928942 MS.gene36069:CDS 45.0%
GCCAGTAAACTCATTCACCT+AGG - chr8.1:52928168-52928187 None:intergenic 45.0%
GCCATCGAGATTGAGATGAT+TGG - chr8.1:52926877-52926896 None:intergenic 45.0%
GCCTAGGTGAATGAGTTTAC+TGG + chr8.1:52928164-52928183 MS.gene36069:intron 45.0%
GCTAGTTACTAACTCATGGC+AGG + chr8.1:52928947-52928966 MS.gene36069:CDS 45.0%
GCTCGCTAAAATAGGCAAAC+TGG - chr8.1:52927007-52927026 None:intergenic 45.0%
GGATTTATCCAGCCGAAAGT+AGG + chr8.1:52927260-52927279 MS.gene36069:CDS 45.0%
GGTGAATGAGTTTACTGGCA+TGG + chr8.1:52928169-52928188 MS.gene36069:intron 45.0%
GGTTTGCATCAACCTTGTGA+TGG - chr8.1:52927106-52927125 None:intergenic 45.0%
GTAACTAGCTCCTTAAACCC+TGG - chr8.1:52928936-52928955 None:intergenic 45.0%
GTCAACGCGCTAAAACTCAT+TGG + chr8.1:52929189-52929208 MS.gene36069:CDS 45.0%
GTGACCTGGTAGTAAACTAG+AGG - chr8.1:52927885-52927904 None:intergenic 45.0%
GTTGTCTAAGCTCAAGCATG+CGG - chr8.1:52929130-52929149 None:intergenic 45.0%
TGAACATAAGGCCGAGGTAT+AGG - chr8.1:52928873-52928892 None:intergenic 45.0%
TGCTTGCAAAGTGCAACTTC+TGG + chr8.1:52927835-52927854 MS.gene36069:CDS 45.0%
TGTCCCAAGATGATGCCTAT+TGG + chr8.1:52929165-52929184 MS.gene36069:CDS 45.0%
TTACTGGCATGGAATTGCCT+GGG + chr8.1:52928180-52928199 MS.gene36069:intron 45.0%
TTCCTCCTCTACAGGAACTT+CGG + chr8.1:52927859-52927878 MS.gene36069:CDS 45.0%
TTTACTGGCATGGAATTGCC+TGG + chr8.1:52928179-52928198 MS.gene36069:intron 45.0%
TTTGCTGCTGATGGGGTTAT+GGG + chr8.1:52928028-52928047 MS.gene36069:CDS 45.0%
! AGAACCATTTGCTGCTGATG+GGG + chr8.1:52928021-52928040 MS.gene36069:CDS 45.0%
! ATTTGCTGCTGATGGGGTTA+TGG + chr8.1:52928027-52928046 MS.gene36069:CDS 45.0%
! CAAGTACATGGTTTGCCCTT+TGG + chr8.1:52927239-52927258 MS.gene36069:CDS 45.0%
! CAGGTCCGTGGTGTATTTTT+CGG + chr8.1:52928558-52928577 MS.gene36069:intron 45.0%
! CTGTGCCTTTGAAGAAAGCA+TGG + chr8.1:52927381-52927400 MS.gene36069:CDS 45.0%
! CTTAGGTCTGGAATTGCACT+CGG - chr8.1:52928216-52928235 None:intergenic 45.0%
! GAGAACCATTTGCTGCTGAT+GGG + chr8.1:52928020-52928039 MS.gene36069:CDS 45.0%
! GCGGCCATCATAAGCTTTTA+GGG - chr8.1:52927312-52927331 None:intergenic 45.0%
! TGCGGCCATCATAAGCTTTT+AGG - chr8.1:52927313-52927332 None:intergenic 45.0%
! TGTTTTCATGTAGACCGCAC+CGG + chr8.1:52928338-52928357 MS.gene36069:intron 45.0%
! TTAGGTCTGGAATTGCACTC+GGG - chr8.1:52928215-52928234 None:intergenic 45.0%
!! AAGTGCCGAACTAGGTACTT+AGG - chr8.1:52928233-52928252 None:intergenic 45.0%
!! CTGTTTCAGGTTCAGACTCT+AGG - chr8.1:52926932-52926951 None:intergenic 45.0%
!!! CCGGGGGTTTAGCTTTATTT+TGG + chr8.1:52928366-52928385 MS.gene36069:intron 45.0%
AATACGGCTGCATGCTTTCG+GGG + chr8.1:52929094-52929113 MS.gene36069:CDS 50.0%
AATGCGTGGCAACTTGAACC+AGG + chr8.1:52928915-52928934 MS.gene36069:CDS 50.0%
AATGGCAGGTCCTGATGATC+AGG + chr8.1:52928138-52928157 MS.gene36069:intron 50.0%
ATCCAGCCGAAAGTAGGTCA+AGG + chr8.1:52927266-52927285 MS.gene36069:CDS 50.0%
ATGCGTGGCAACTTGAACCA+GGG + chr8.1:52928916-52928935 MS.gene36069:CDS 50.0%
CAACTCCGGGCAAACTTTGT+CGG - chr8.1:52927501-52927520 None:intergenic 50.0%
CCACGGACCTGAAAATTGAG+TGG - chr8.1:52928549-52928568 None:intergenic 50.0%
CCGAAAGTAGGTCAAGGTCT+AGG + chr8.1:52927272-52927291 MS.gene36069:CDS 50.0%
CCGAACTAGGTACTTAGGTC+TGG - chr8.1:52928228-52928247 None:intergenic 50.0%
CCTAGTTCGGCACTTCAATC+CGG + chr8.1:52928238-52928257 MS.gene36069:intron 50.0%
CGTCGAGCTGTACTTGATTC+AGG + chr8.1:52928657-52928676 MS.gene36069:intron 50.0%
GAATGGGATCTTGTAGCCAG+CGG - chr8.1:52927610-52927629 None:intergenic 50.0%
GACGCCAATAGGCATCATCT+TGG - chr8.1:52929172-52929191 None:intergenic 50.0%
GCAGGTAAACCAAGCACTAG+AGG - chr8.1:52927908-52927927 None:intergenic 50.0%
GCTGTTCTACGACCTCCATT+AGG - chr8.1:52928500-52928519 None:intergenic 50.0%
GTAATCGTAACCCGTTTGCC+TGG - chr8.1:52927050-52927069 None:intergenic 50.0%
GTCATGGATCGAATCTCACC+TGG + chr8.1:52927170-52927189 MS.gene36069:CDS 50.0%
TCAGTCACAAACGGAACAGC+AGG - chr8.1:52927926-52927945 None:intergenic 50.0%
! ACAAAGTTTGGGACGACACC+AGG - chr8.1:52927191-52927210 None:intergenic 50.0%
! GGAGAACCATTTGCTGCTGA+TGG + chr8.1:52928019-52928038 MS.gene36069:CDS 50.0%
! TATAAGCCAAGGAGAGCGCA+TGG - chr8.1:52928628-52928647 None:intergenic 50.0%
! TCGAGGACAACAGCTGTTTC+AGG - chr8.1:52926945-52926964 None:intergenic 50.0%
! TCGGCCTCTAGTTTACTACC+AGG + chr8.1:52927878-52927897 MS.gene36069:CDS 50.0%
! TTGGCGAGCTGACTTTAAGC+CGG + chr8.1:52927553-52927572 MS.gene36069:CDS 50.0%
! TTTAGCGCGTTGACGCCAAT+AGG - chr8.1:52929183-52929202 None:intergenic 50.0%
!! TCATGGCAGTGAGTTGGTGT+TGG - chr8.1:52927754-52927773 None:intergenic 50.0%
!!! CCACTCAATTTTCAGGTCCG+TGG + chr8.1:52928546-52928565 MS.gene36069:intron 50.0%
AACCTTTCTTCCACCGCACG+CGG - chr8.1:52928741-52928760 None:intergenic 55.0%
AGAGGCCGAAGTTCCTGTAG+AGG - chr8.1:52927867-52927886 None:intergenic 55.0%
ATGTCTCGTGCTTGGAAGCC+AGG + chr8.1:52927029-52927048 MS.gene36069:CDS 55.0%
CCTAGGCAGACCTGATCATC+AGG - chr8.1:52928151-52928170 None:intergenic 55.0%
CCTGATGATCAGGTCTGCCT+AGG + chr8.1:52928148-52928167 MS.gene36069:intron 55.0%
CGATGGCCTGACTTTGTCCA+AGG + chr8.1:52926890-52926909 MS.gene36069:CDS 55.0%
GACCAATGAGACAGTGCTCG+AGG - chr8.1:52926962-52926981 None:intergenic 55.0%
GACCTTGACCTACTTTCGGC+TGG - chr8.1:52927271-52927290 None:intergenic 55.0%
GCATGGAATTGCCTGGGTGT+AGG + chr8.1:52928186-52928205 MS.gene36069:intron 55.0%
GGCCTGACTTTGTCCAAGGA+AGG + chr8.1:52926894-52926913 MS.gene36069:CDS 55.0%
GTACTGCTACTACCAACCGC+TGG + chr8.1:52927591-52927610 MS.gene36069:CDS 55.0%
GTATCCTTCAACCGGGACGT+CGG - chr8.1:52928688-52928707 None:intergenic 55.0%
GTGCGGAAGATATGTGGGAG+TGG + chr8.1:52929009-52929028 MS.gene36069:CDS 55.0%
GTGCTTGGAAGCCAGGCAAA+CGG + chr8.1:52927036-52927055 MS.gene36069:CDS 55.0%
TGCTTGGAAGCCAGGCAAAC+GGG + chr8.1:52927037-52927056 MS.gene36069:CDS 55.0%
TTATCCGACGTCCCGGTTGA+AGG + chr8.1:52928681-52928700 MS.gene36069:intron 55.0%
TTCAGGCTTATCCGACGTCC+CGG + chr8.1:52928674-52928693 MS.gene36069:intron 55.0%
TTCATGTCTCGGCAACAGCC+CGG + chr8.1:52929243-52929262 MS.gene36069:intron 55.0%
! GTCCTCGAGCACTGTCTCAT+TGG + chr8.1:52926957-52926976 MS.gene36069:CDS 55.0%
!! CCGGATTGAAGTGCCGAACT+AGG - chr8.1:52928241-52928260 None:intergenic 55.0%
!! CTTCTGGCTTCCTCCTCTAC+AGG + chr8.1:52927851-52927870 MS.gene36069:CDS 55.0%
AAGTCTTGGCACTCCGCGTG+CGG + chr8.1:52928725-52928744 MS.gene36069:intron 60.0%
AGAGTTCCCGTACCAGCAGC+AGG - chr8.1:52927701-52927720 None:intergenic 60.0%
AGCTAAACCCCCGGCTCTAC+CGG - chr8.1:52928360-52928379 None:intergenic 60.0%
AGGAACAGCAGCAGTGCCAC+CGG - chr8.1:52927663-52927682 None:intergenic 60.0%
CCAAGCACTAGAGGGTGACC+TGG - chr8.1:52927899-52927918 None:intergenic 60.0%
CCACGCCAAACCAACGCTAC+CGG + chr8.1:52927641-52927660 MS.gene36069:CDS 60.0%
CCAGGTCACCCTCTAGTGCT+TGG + chr8.1:52927896-52927915 MS.gene36069:CDS 60.0%
CGACACACCTGCTGCTGGTA+CGG + chr8.1:52927691-52927710 MS.gene36069:CDS 60.0%
CGTGGCACAGATGCGGGAAT+GGG - chr8.1:52927626-52927645 None:intergenic 60.0%
CTCGGCAACAGCCCGGAAAA+AGG + chr8.1:52929250-52929269 MS.gene36069:intron 60.0%
GACACACCTGCTGCTGGTAC+GGG + chr8.1:52927692-52927711 MS.gene36069:CDS 60.0%
GAGGTCGTAGAACAGCCGCT+TGG + chr8.1:52928504-52928523 MS.gene36069:intron 60.0%
GCGAGCGTATGTCTCGTGCT+TGG + chr8.1:52927021-52927040 MS.gene36069:CDS 60.0%
GGCACTGCTGCTGTTCCTGT+TGG + chr8.1:52927665-52927684 MS.gene36069:CDS 60.0%
GGCCGAAGTTCCTGTAGAGG+AGG - chr8.1:52927864-52927883 None:intergenic 60.0%
GGGATCTTGTAGCCAGCGGT+TGG - chr8.1:52927606-52927625 None:intergenic 60.0%
GGTTTGGCGTGGCACAGATG+CGG - chr8.1:52927633-52927652 None:intergenic 60.0%
GTTTGGCGTGGCACAGATGC+GGG - chr8.1:52927632-52927651 None:intergenic 60.0%
TGGCGTGTCCGTGCAAGCAA+TGG + chr8.1:52927401-52927420 MS.gene36069:CDS 60.0%
! CACGCGGAGTGCCAAGACTT+TGG - chr8.1:52928725-52928744 None:intergenic 60.0%
!! TGCCACCGGTAGCGTTGGTT+TGG - chr8.1:52927649-52927668 None:intergenic 60.0%
AGCAGTGCCACCGGTAGCGT+TGG - chr8.1:52927654-52927673 None:intergenic 65.0%
CACTCGGGCTACCTACACCC+AGG - chr8.1:52928200-52928219 None:intergenic 65.0%
CGCCAAACCAACGCTACCGG+TGG + chr8.1:52927644-52927663 MS.gene36069:CDS 65.0%
CTCCGCGTGCGGTGGAAGAA+AGG + chr8.1:52928736-52928755 MS.gene36069:intron 65.0%
GCAGGTGTGTCGCAGCCAAC+AGG - chr8.1:52927683-52927702 None:intergenic 65.0%
GCGTGGCACAGATGCGGGAA+TGG - chr8.1:52927627-52927646 None:intergenic 65.0%
GGCGTACCATGCGCTCTCCT+TGG + chr8.1:52928619-52928638 MS.gene36069:intron 65.0%
! GTAGACCGCACCGGTAGAGC+CGG + chr8.1:52928347-52928366 MS.gene36069:intron 65.0%
! TAGACCGCACCGGTAGAGCC+GGG + chr8.1:52928348-52928367 MS.gene36069:intron 65.0%
!! CCGGTAGCGTTGGTTTGGCG+TGG - chr8.1:52927644-52927663 None:intergenic 65.0%
AACCCCCGGCTCTACCGGTG+CGG - chr8.1:52928355-52928374 None:intergenic 70.0%
GGCTGCGACACACCTGCTGC+TGG + chr8.1:52927686-52927705 MS.gene36069:CDS 70.0%
TCTTGGCACTCCGCGTGCGG+TGG + chr8.1:52928728-52928747 MS.gene36069:intron 70.0%
! AGACCGCACCGGTAGAGCCG+GGG + chr8.1:52928349-52928368 MS.gene36069:intron 70.0%
! GACCGCACCGGTAGAGCCGG+GGG + chr8.1:52928350-52928369 MS.gene36069:intron 75.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 52926867 52929309 52926867 ID=MS.gene36069
chr8.1 mRNA 52926867 52929309 52926867 ID=MS.gene36069.t1;Parent=MS.gene36069
chr8.1 exon 52926867 52928072 52926867 ID=MS.gene36069.t1.exon1;Parent=MS.gene36069.t1
chr8.1 CDS 52926867 52928072 52926867 ID=cds.MS.gene36069.t1;Parent=MS.gene36069.t1
chr8.1 exon 52928819 52929210 52928819 ID=MS.gene36069.t1.exon2;Parent=MS.gene36069.t1
chr8.1 CDS 52928819 52929210 52928819 ID=cds.MS.gene36069.t1;Parent=MS.gene36069.t1
chr8.1 exon 52929306 52929309 52929306 ID=MS.gene36069.t1.exon3;Parent=MS.gene36069.t1
chr8.1 CDS 52929306 52929309 52929306 ID=cds.MS.gene36069.t1;Parent=MS.gene36069.t1
Gene Sequence

>MS.gene36069

ATGGATCCCAATCATCTCAATCTCGATGGCCTGACTTTGTCCAAGGAAGGTTTAACCCTAAACCTAGAGTCTGAACCTGAAACAGCTGTTGTCCTCGAGCACTGTCTCATTGGTCGTGTGCTTGCTGATCGTGAAATCCAGTTTGCCTATTTTAGCGAGCGTATGTCTCGTGCTTGGAAGCCAGGCAAACGGGTTACGATTACTAAGTCTGTGAATGATCGCTATTTGTTCCAATTCCATCACAAGGTTGATGCAAACCATGTTTTAGAGGAAGGTCCATGGTTGTATGACAATTTTCATATTGTCATGGATCGAATCTCACCTGGTGTCGTCCCAAACTTTGTTCCACTCAACCATATCGATTTCTGGGTTCAAGTACATGGTTTGCCCTTTGGATTTATCCAGCCGAAAGTAGGTCAAGGTCTAGGCAATTTCTTAGGAACCCTAAAAGCTTATGATGGCCGCAACTTAATCCATAGCTCCTATATGCGAATCAAAGTTGCTATTGATGTCACTGTGCCTTTGAAGAAAGCATGGCGTGTCCGTGCAAGCAATGGAGATTTTGTTACTATTAATTTTAAATATGAGAAATTGGGTGTTTTTTGTTACAGGTGTGGTTTACTCGGACATACCGACAAAGTTTGCCCGGAGTTGTTTGAATTAGAAGCTGATGATGGAGTTCGTAATTGGCGAGCTGACTTTAAGCCGGTTACAAACAAGATTGGTACTGCTACTACCAACCGCTGGCTACAAGATCCCATTCCCGCATCTGTGCCACGCCAAACCAACGCTACCGGTGGCACTGCTGCTGTTCCTGTTGGCTGCGACACACCTGCTGCTGGTACGGGAACTCTGACATCTTTCAATGACTGTATGCTTGCTTTCCAACACCAACTCACTGCCATGAAACAAGATGTTATTGCTGCCCAAAATGCAGCACATGCTAAAAAAGGTAACGACTCTAATTCTGCTTGCAAAGTGCAACTTCTGGCTTCCTCCTCTACAGGAACTTCGGCCTCTAGTTTACTACCAGGTCACCCTCTAGTGCTTGGTTTACCTGCTGTTCCGTTTGTGACTGAAAATAATGAGGAAATGCATGAGGACAATGGCTCGGAGTTGAAGAAAAAGAAGCGTATGTTTGCCCTTCAGAATGGAGAACCATTTGCTGCTGATGGGGTTATGGGAAACGATGTAATAGGAACAAATGTTAGTCATGGGGGGGATGCTGAAATGAATGTATTTTCTAATCCTTTGTTTGATGAGAAAGATGTAATGGCAGGTCCTGATGATCAGGTCTGCCTAGGTGAATGAGTTTACTGGCATGGAATTGCCTGGGTGTAGGTAGCCCGAGTGCAATTCCAGACCTAAGTACCTAGTTCGGCACTTCAATCCGGACCTTTTGTTCCTTAGTGAGACTCTAGCTCACTGAAATAAAATTGAAGGACTTCGTTTTTTGATTGGTTACGATTCTTGTTTTCATGTAGACCGCACCGGTAGAGCCGGGGGTTTAGCTTTATTTTGGAAAAATTCATTGCATTGTCAGCTTGTTAATTTTTAAAGTAATCACATCACTGTTGAAATTGTAAATAATGCTCTTGGTACTTGGCGACTTACCAGTTATTATGGCTATCCTAATGGAGGTCGTAGAACAGCCGCTTGGAATTTTCTCCGACAACTTTCCACTCAATTTTCAGGTCCGTGGTGTATTTTTCGGCGATTTTAACGACATTTTGGATGCAAGTTAGAAAAGAGGGCGTACCATGCGCTCTCCTTGGCTTATAAATGGCTTTCGTCGAGCTGTACTTGATTCAGGCTTATCCGACGTCCCGGTTGAAGGATACCCATATACTTGGTTCCAAAGTCTTGGCACTCCGCGTGCGGTGGAAGAAAGGTTAGATCGCGCACTTGCTAATAATTTATGGTTTAATATGTTTCCAAATGCTATTGTTGAGACTCTTGTCGCACCTACTTCCGATCACTACCCTATACTTGTAAATGTTGCGCCTATACCTCGGCCTTATGTTCATAAACGACATTTTCGTTATGAAAATGCGTGGCAACTTGAACCAGGGTTTAAGGAGCTAGTTACTAACTCATGGCAGGATCATTCAACAAGCACTCTTATGCCAAAATTATCTTTATGTGCGGAAGATATGTGGGAGTGGAAGAGGAATCATTGTAACAAACTGAAAAAGGATATTGAAGATTGCCGTAAGGATTTGCAAGAAATACGGCTGCATGCTTTCGGGGAGCATCAAAACCGCATGCTTGAGCTTAGACAACGCATGCAACGTATGCTGTCCCAAGATGATGCCTATTGGCGTCAACGCGCTAAAACTCATTGGTACAAGGATGGCGACAGAAATGCAAAGTTTTTTCATGTCTCGGCAACAGCCCGGAAAAAGGAAAACCGCATATGCTCTCTTGATGATGATGTAGGTAA
Protein sequence

>MS.gene36069.t1

MDPNHLNLDGLTLSKEGLTLNLESEPETAVVLEHCLIGRVLADREIQFAYFSERMSRAWKPGKRVTITKSVNDRYLFQFHHKVDANHVLEEGPWLYDNFHIVMDRISPGVVPNFVPLNHIDFWVQVHGLPFGFIQPKVGQGLGNFLGTLKAYDGRNLIHSSYMRIKVAIDVTVPLKKAWRVRASNGDFVTINFKYEKLGVFCYRCGLLGHTDKVCPELFELEADDGVRNWRADFKPVTNKIGTATTNRWLQDPIPASVPRQTNATGGTAAVPVGCDTPAAGTGTLTSFNDCMLAFQHQLTAMKQDVIAAQNAAHAKKGNDSNSACKVQLLASSSTGTSASSLLPGHPLVLGLPAVPFVTENNEEMHEDNGSELKKKKRMFALQNGEPFAADGVMGNDVIGTNTLVAPTSDHYPILVNVAPIPRPYVHKRHFRYENAWQLEPGFKELVTNSWQDHSTSTLMPKLSLCAEDMWEWKRNHCNKLKKDIEDCRKDLQEIRLHAFGEHQNRMLELRQRMQRMLSQDDAYWRQRAKTHW