Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34812.t1 | KEH26371.1 | 43.3 | 538 | 223 | 5 | 1 | 538 | 22 | 477 | 2.60E-107 | 399.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34812.t1 | A0A072UAE7 | 43.3 | 538 | 223 | 5 | 1 | 538 | 22 | 477 | 1.9e-107 | 399.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34812.t1 | MTR_6g053230 | 45.167 | 538 | 213 | 5 | 1 | 538 | 22 | 477 | 6.32e-136 | 403 |
MS.gene34812.t1 | MTR_3g024240 | 65.289 | 121 | 38 | 2 | 80 | 197 | 55 | 174 | 3.59e-47 | 163 |
MS.gene34812.t1 | MTR_6g033215 | 37.755 | 196 | 119 | 1 | 2 | 197 | 102 | 294 | 1.20e-46 | 165 |
MS.gene34812.t1 | MTR_0010s0370 | 37.662 | 154 | 96 | 0 | 22 | 175 | 24 | 177 | 6.07e-31 | 119 |
MS.gene34812.t1 | MTR_0010s0350 | 37.662 | 154 | 96 | 0 | 22 | 175 | 24 | 177 | 6.07e-31 | 119 |
MS.gene34812.t1 | MTR_3g053920 | 33.775 | 151 | 83 | 2 | 19 | 169 | 23 | 156 | 1.35e-23 | 101 |
MS.gene34812.t1 | MTR_2g061500 | 37.037 | 108 | 68 | 0 | 20 | 127 | 24 | 131 | 3.54e-22 | 93.2 |
MS.gene34812.t1 | MTR_4g020545 | 28.571 | 210 | 98 | 4 | 61 | 270 | 81 | 238 | 7.76e-20 | 90.5 |
MS.gene34812.t1 | MTR_8g468010 | 56.667 | 60 | 26 | 0 | 117 | 176 | 5 | 64 | 4.01e-19 | 84.3 |
MS.gene34812.t1 | MTR_4g103530 | 39.326 | 89 | 54 | 0 | 55 | 143 | 5 | 93 | 2.50e-16 | 77.8 |
MS.gene34812.t1 | MTR_1g032270 | 40.541 | 74 | 44 | 0 | 96 | 169 | 1 | 74 | 2.14e-14 | 70.9 |
MS.gene34812.t1 | MTR_1g036720 | 41.429 | 70 | 41 | 0 | 30 | 99 | 32 | 101 | 2.47e-14 | 69.7 |
MS.gene34812.t1 | MTR_6g053790 | 31.298 | 131 | 67 | 3 | 134 | 263 | 35 | 143 | 4.39e-13 | 70.9 |
MS.gene34812.t1 | MTR_7g106180 | 27.465 | 142 | 102 | 1 | 32 | 173 | 26 | 166 | 5.36e-12 | 66.2 |
MS.gene34812.t1 | MTR_7g011710 | 30.275 | 109 | 73 | 2 | 55 | 161 | 5 | 112 | 2.83e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34812.t1 | AT3G31430 | 31.928 | 166 | 103 | 6 | 51 | 213 | 153 | 311 | 1.42e-13 | 72.4 |
MS.gene34812.t1 | AT3G57587 | 25.714 | 175 | 116 | 5 | 51 | 219 | 58 | 224 | 2.04e-13 | 72.4 |
MS.gene34812.t1 | AT2G02103 | 25.309 | 162 | 111 | 2 | 73 | 226 | 80 | 239 | 1.57e-12 | 70.1 |
MS.gene34812.t1 | AT5G25200 | 24.540 | 163 | 113 | 2 | 72 | 226 | 79 | 239 | 1.74e-12 | 69.3 |
MS.gene34812.t1 | AT2G41590 | 26.667 | 150 | 104 | 3 | 72 | 219 | 79 | 224 | 3.17e-12 | 68.6 |
MS.gene34812.t1 | AT5G18636 | 24.138 | 145 | 108 | 1 | 72 | 216 | 79 | 221 | 1.24e-11 | 67.0 |
MS.gene34812.t1 | AT2G17920 | 23.196 | 194 | 147 | 1 | 30 | 223 | 37 | 228 | 2.30e-11 | 65.5 |
Find 161 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCCCTTCCCTTATGATTAA+AGG | 0.129114 | 7.1:+54377871 | None:intergenic |
TTGCTATATCTGCGGGCTAT+TGG | 0.197696 | 7.1:-54378613 | MS.gene34812:CDS |
TGCTATATCTGCGGGCTATT+GGG | 0.272574 | 7.1:-54378612 | MS.gene34812:CDS |
ATCAATCTGGCGTCCTGGTC+AGG | 0.286734 | 7.1:-54379054 | MS.gene34812:CDS |
TCGTTGATGGTGTCCAAGGC+TGG | 0.292032 | 7.1:-54378548 | MS.gene34812:CDS |
ATTCTACCATGAATGGGATT+TGG | 0.314187 | 7.1:-54378988 | MS.gene34812:CDS |
TCAAGTGAGCATACGCTGTT+TGG | 0.315623 | 7.1:-54378345 | MS.gene34812:CDS |
TTGGAAAGAGTTCTTCAAAA+TGG | 0.319506 | 7.1:-54378969 | MS.gene34812:CDS |
TATGATGAAAGTAATTATTA+TGG | 0.322911 | 7.1:-54378768 | MS.gene34812:CDS |
AATCCCATTCATGGTAGAAT+TGG | 0.331082 | 7.1:+54378991 | None:intergenic |
CAGAAAATAAAGGATTAGTT+TGG | 0.332197 | 7.1:+54377626 | None:intergenic |
TTTGTCTCCTGCTCAACATT+TGG | 0.332835 | 7.1:+54377745 | None:intergenic |
CTTTCAACGAAGCTGAAGTC+TGG | 0.337203 | 7.1:-54378875 | MS.gene34812:CDS |
GGTGGTTCCGATGGTCTTAA+TGG | 0.344331 | 7.1:-54378417 | MS.gene34812:CDS |
CTCTTTCCAAATCCCATTCA+TGG | 0.346917 | 7.1:+54378982 | None:intergenic |
ATTTCCAATTCTACCATGAA+TGG | 0.355771 | 7.1:-54378995 | MS.gene34812:CDS |
TTTGTGGAATTTAATTCAAA+AGG | 0.356644 | 7.1:+54378228 | None:intergenic |
TTGCGGGTCCTTTAATCATA+AGG | 0.367817 | 7.1:-54377879 | MS.gene34812:CDS |
ACCTGTCCGATTTCAATTCA+TGG | 0.368482 | 7.1:-54379090 | MS.gene34812:CDS |
ATGAGGTTGGTGAATGGAAT+GGG | 0.372127 | 7.1:-54378183 | MS.gene34812:CDS |
ATGCTTCTTGGATGTCATAT+TGG | 0.381288 | 7.1:-54378804 | MS.gene34812:CDS |
CCTTCAAGACCAATCATTGC+GGG | 0.384639 | 7.1:-54377895 | MS.gene34812:CDS |
CTTGAACCAGGATTCGTTGA+TGG | 0.392405 | 7.1:-54378561 | MS.gene34812:CDS |
CCTTTCCCTTTGTCATCACT+TGG | 0.396709 | 7.1:+54377814 | None:intergenic |
TAATAGTAATGTGGTTGTTA+TGG | 0.399029 | 7.1:-54378373 | MS.gene34812:CDS |
TTGCTTGAGCTTTGCGTTGT+GGG | 0.415231 | 7.1:-54379131 | MS.gene34812:CDS |
CAGAGTGAGGTGCTGCTGAC+AGG | 0.421342 | 7.1:-54378096 | MS.gene34812:CDS |
AGGATGGTTACGAACTTCAT+TGG | 0.427501 | 7.1:-54378282 | MS.gene34812:CDS |
TGACAAAGGGAAAGGTAAAA+TGG | 0.427852 | 7.1:-54377806 | MS.gene34812:CDS |
TCTCCAAATGGATCCTCTAC+TGG | 0.430669 | 7.1:-54379179 | MS.gene34812:CDS |
TCGTTTAAGTACGAAAGAAT+TGG | 0.431256 | 7.1:-54378642 | MS.gene34812:CDS |
CATAATCCTCATCAGCAATC+AGG | 0.431907 | 7.1:-54378072 | MS.gene34812:CDS |
ACGAACTTCATTGGTCAAAC+TGG | 0.432288 | 7.1:-54378273 | MS.gene34812:CDS |
ATTCATGGTAGAATTGGAAA+TGG | 0.435101 | 7.1:+54378997 | None:intergenic |
ATTCATGTGGGAACAAATGC+TGG | 0.438746 | 7.1:-54378126 | MS.gene34812:CDS |
TGACCAGGACGCCAGATTGA+TGG | 0.439149 | 7.1:+54379056 | None:intergenic |
CGAAGCTGAAGTCTGGGTTC+AGG | 0.443582 | 7.1:-54378868 | MS.gene34812:CDS |
ATTAAAGGACCCGCAATGAT+TGG | 0.445791 | 7.1:+54377886 | None:intergenic |
TCTCCTCCATGAATTGAAAT+CGG | 0.449098 | 7.1:+54379084 | None:intergenic |
CGTTGATGGTGTCCAAGGCT+GGG | 0.450257 | 7.1:-54378547 | MS.gene34812:CDS |
GAGTATGTAGGCATGCTTCT+TGG | 0.450788 | 7.1:-54378816 | MS.gene34812:CDS |
AATCTGATTAGCTATGTTTG+TGG | 0.453740 | 7.1:+54378212 | None:intergenic |
CCCGCAATGATTGGTCTTGA+AGG | 0.456526 | 7.1:+54377895 | None:intergenic |
AGTTAGCACAAAAGCATCAT+TGG | 0.456599 | 7.1:+54378047 | None:intergenic |
TCACCCAAGCTGGTGAAAAC+AGG | 0.465715 | 7.1:-54379022 | MS.gene34812:CDS |
CAAGTGAGCATACGCTGTTT+GGG | 0.465924 | 7.1:-54378344 | MS.gene34812:CDS |
AATAATAATGTTGGTACGCT+GGG | 0.471269 | 7.1:-54377973 | MS.gene34812:CDS |
GTTGATGGTGTCCAAGGCTG+GGG | 0.471672 | 7.1:-54378546 | MS.gene34812:CDS |
AACATCAACGACTCTCCAAA+TGG | 0.471784 | 7.1:-54379191 | MS.gene34812:CDS |
TTTCCAATTCTACCATGAAT+GGG | 0.472701 | 7.1:-54378994 | MS.gene34812:CDS |
AATGAGGTTGGTGAATGGAA+TGG | 0.474578 | 7.1:-54378184 | MS.gene34812:CDS |
CTTCCATCAATCTGGCGTCC+TGG | 0.475644 | 7.1:-54379059 | MS.gene34812:CDS |
TTGTGGAATTTAATTCAAAA+GGG | 0.478866 | 7.1:+54378229 | None:intergenic |
TGCGGGTCCTTTAATCATAA+GGG | 0.483166 | 7.1:-54377878 | MS.gene34812:CDS |
GACCCAGTAGAGGATCCATT+TGG | 0.484757 | 7.1:+54379176 | None:intergenic |
AGGAAATGCAGGAGATGGCT+TGG | 0.485285 | 7.1:-54377668 | MS.gene34812:CDS |
AGTCAGACCAAATGTTGAGC+AGG | 0.492313 | 7.1:-54377752 | MS.gene34812:CDS |
AGGAGAGACTTCCATCAATC+TGG | 0.492557 | 7.1:-54379067 | MS.gene34812:CDS |
CAGCCGATTCTGAGCATCTG+TGG | 0.495421 | 7.1:-54378003 | MS.gene34812:CDS |
GTCCCACAGATGCTCAGAAT+CGG | 0.495865 | 7.1:+54378000 | None:intergenic |
GCGCGTGGAGGTCGTAATGC+TGG | 0.496370 | 7.1:-54378444 | MS.gene34812:CDS |
AACATTGACACAGGAAATGC+AGG | 0.497444 | 7.1:-54377679 | MS.gene34812:CDS |
AACTGGATGTAATCAAAGGT+TGG | 0.500234 | 7.1:-54378028 | MS.gene34812:CDS |
ACTGGATGTAATCAAAGGTT+GGG | 0.501627 | 7.1:-54378027 | MS.gene34812:CDS |
GGAAATGCAGGAGATGGCTT+GGG | 0.508184 | 7.1:-54377667 | MS.gene34812:CDS |
CTGGGAGAGACATCAGAGGC+AGG | 0.509730 | 7.1:-54377955 | MS.gene34812:CDS |
CTCCAAATGGATCCTCTACT+GGG | 0.512789 | 7.1:-54379178 | MS.gene34812:CDS |
TTCATTGGTCAAACTGGAGG+AGG | 0.513129 | 7.1:-54378267 | MS.gene34812:CDS |
TCAATCTGGCGTCCTGGTCA+GGG | 0.514431 | 7.1:-54379053 | MS.gene34812:CDS |
ATTCTGAGCATCTGTGGGAC+TGG | 0.516437 | 7.1:-54377997 | MS.gene34812:CDS |
AAATAATAATGTTGGTACGC+TGG | 0.517674 | 7.1:-54377974 | MS.gene34812:CDS |
CAGGAGACAAATAACAATGC+TGG | 0.521330 | 7.1:-54377733 | MS.gene34812:CDS |
GAGTTCTTCAAAATGGTCCC+TGG | 0.521753 | 7.1:-54378962 | MS.gene34812:CDS |
TGGACACCATCAACGAATCC+TGG | 0.526553 | 7.1:+54378555 | None:intergenic |
AATGCTGGAGGGAGAACTGT+GGG | 0.526678 | 7.1:-54378513 | MS.gene34812:CDS |
TCAGATTACTATAATGAGGT+TGG | 0.530450 | 7.1:-54378196 | MS.gene34812:CDS |
ATTGGTCAAACTGGAGGAGG+GGG | 0.533927 | 7.1:-54378264 | MS.gene34812:CDS |
GTCAATAAGTGGCTCAGAGG+TGG | 0.534863 | 7.1:-54378477 | MS.gene34812:CDS |
GCTGGTCGAGGTGGTTCCGA+TGG | 0.537680 | 7.1:-54378426 | MS.gene34812:CDS |
CAGGTCTTTAATCTGCCACA+TGG | 0.537747 | 7.1:-54378849 | MS.gene34812:CDS |
ATTTACCAAGTGATGACAAA+GGG | 0.538835 | 7.1:-54377819 | MS.gene34812:CDS |
CACAGATGCTCAGAATCGGC+TGG | 0.539072 | 7.1:+54378004 | None:intergenic |
ACTATAATGAGGTTGGTGAA+TGG | 0.540236 | 7.1:-54378189 | MS.gene34812:CDS |
GACATCAGAGGCAGGGCGCG+TGG | 0.541393 | 7.1:-54377947 | MS.gene34812:CDS |
ATGGTCTTTGAGAAAGAAGA+TGG | 0.542271 | 7.1:-54378681 | MS.gene34812:CDS |
AATGTGGTCAATTCTGATGC+AGG | 0.543488 | 7.1:-54377847 | MS.gene34812:CDS |
GTGGCTCAGAGGTGGAAGAA+TGG | 0.544414 | 7.1:-54378469 | MS.gene34812:CDS |
TCCTTTAATCATAAGGGAAG+GGG | 0.547215 | 7.1:-54377872 | MS.gene34812:CDS |
TCCATGAATTGAAATCGGAC+AGG | 0.550535 | 7.1:+54379089 | None:intergenic |
TTTCAACGAAGCTGAAGTCT+GGG | 0.553299 | 7.1:-54378874 | MS.gene34812:CDS |
AAAGTAATTATTATGGCCCA+TGG | 0.554347 | 7.1:-54378761 | MS.gene34812:CDS |
AGAGTGAGGTGCTGCTGACA+GGG | 0.555775 | 7.1:-54378095 | MS.gene34812:CDS |
AACAATGGAGGTAGTAATGT+GGG | 0.558282 | 7.1:-54378156 | MS.gene34812:CDS |
CTAATCAGATTACTATAATG+AGG | 0.559518 | 7.1:-54378200 | MS.gene34812:CDS |
CATTGGTCAAACTGGAGGAG+GGG | 0.564143 | 7.1:-54378265 | MS.gene34812:CDS |
AGCCGATTCTGAGCATCTGT+GGG | 0.564310 | 7.1:-54378002 | MS.gene34812:CDS |
TGGTGAAGCTATTTCTGAGG+TGG | 0.565205 | 7.1:-54378898 | MS.gene34812:CDS |
GGAGGTCGTAATGCTGGTCG+AGG | 0.565263 | 7.1:-54378438 | MS.gene34812:CDS |
ATTGCTTGAGCTTTGCGTTG+TGG | 0.566776 | 7.1:-54379132 | MS.gene34812:CDS |
GGTCAATTCTGATGCAGGAA+AGG | 0.568223 | 7.1:-54377842 | MS.gene34812:CDS |
GTCCTTTAATCATAAGGGAA+GGG | 0.568342 | 7.1:-54377873 | MS.gene34812:CDS |
TTGGTACCTGATTGCTGATG+AGG | 0.568991 | 7.1:+54378066 | None:intergenic |
AATGCAGGAGATGGCTTGGG+AGG | 0.569358 | 7.1:-54377664 | MS.gene34812:CDS |
TGTGCTAAAAGGCTTGAACC+AGG | 0.571957 | 7.1:-54378573 | MS.gene34812:CDS |
TGCTGGAGGGAGAACTGTGG+GGG | 0.571970 | 7.1:-54378511 | MS.gene34812:CDS |
GAAATGTCACTGTCAATAAG+TGG | 0.573637 | 7.1:-54378488 | MS.gene34812:CDS |
CATAAGGGAAGGGGCTAATG+TGG | 0.574466 | 7.1:-54377863 | MS.gene34812:CDS |
GGATTCGTTGATGGTGTCCA+AGG | 0.575967 | 7.1:-54378552 | MS.gene34812:CDS |
AATGGAATGGGGTCTAACAA+TGG | 0.577339 | 7.1:-54378171 | MS.gene34812:CDS |
GACACAGGAAATGCAGGAGA+TGG | 0.577570 | 7.1:-54377673 | MS.gene34812:CDS |
ATGCGCATATACATTCTCCA+TGG | 0.577660 | 7.1:+54378744 | None:intergenic |
TAACAATGGAGGTAGTAATG+TGG | 0.579247 | 7.1:-54378157 | MS.gene34812:CDS |
GGTGTTACAATCACCCAAGC+TGG | 0.580839 | 7.1:-54379032 | MS.gene34812:CDS |
TCATTGGTCAAACTGGAGGA+GGG | 0.583089 | 7.1:-54378266 | MS.gene34812:CDS |
CCAAGTGATGACAAAGGGAA+AGG | 0.586386 | 7.1:-54377814 | MS.gene34812:CDS |
GGGTATATGAATGAGTATGT+AGG | 0.587197 | 7.1:-54378828 | MS.gene34812:CDS |
ATTAAGACCATTAAGACCAT+CGG | 0.588341 | 7.1:+54378410 | None:intergenic |
GTACGAGTCCTACGTGGTGG+AGG | 0.588427 | 7.1:-54378318 | MS.gene34812:CDS |
AATGTATATGCGCATTCGTG+TGG | 0.589383 | 7.1:-54378736 | MS.gene34812:CDS |
GGTGGAAGAATGGCAGCGCG+TGG | 0.589856 | 7.1:-54378459 | MS.gene34812:CDS |
TGCGCATATACATTCTCCAT+GGG | 0.591714 | 7.1:+54378745 | None:intergenic |
TGGGAGAGACATCAGAGGCA+GGG | 0.600479 | 7.1:-54377954 | MS.gene34812:CDS |
TTCATGTGGGAACAAATGCT+GGG | 0.601117 | 7.1:-54378125 | MS.gene34812:CDS |
GTGATTGTAACACCCTGACC+AGG | 0.602165 | 7.1:+54379041 | None:intergenic |
AAGACCATGCTCCTCTTCAG+AGG | 0.606011 | 7.1:+54378696 | None:intergenic |
GGTCCTTTAATCATAAGGGA+AGG | 0.609221 | 7.1:-54377874 | MS.gene34812:CDS |
TGCTGGGAGTCAACAGAGTG+AGG | 0.611143 | 7.1:-54378109 | MS.gene34812:CDS |
GGAAAGGTAAAATGGACGAT+GGG | 0.624495 | 7.1:-54377798 | MS.gene34812:CDS |
CAGTTCAGATGACCCAGTAG+AGG | 0.625147 | 7.1:+54379166 | None:intergenic |
GGGAGATTCTTAAATGCTGG+AGG | 0.628940 | 7.1:-54378525 | MS.gene34812:CDS |
TGCTAACTGGATGTAATCAA+AGG | 0.629561 | 7.1:-54378032 | MS.gene34812:CDS |
GCCTTCAAGACCAATCATTG+CGG | 0.631393 | 7.1:-54377896 | MS.gene34812:CDS |
TGAACCTCTGAAGAGGAGCA+TGG | 0.634050 | 7.1:-54378700 | MS.gene34812:CDS |
GGTCGTAATGCTGGTCGAGG+TGG | 0.634414 | 7.1:-54378435 | MS.gene34812:CDS |
AGGTCTTTAATCTGCCACAT+GGG | 0.634617 | 7.1:-54378848 | MS.gene34812:CDS |
ATATTGCTGAACCTCTGAAG+AGG | 0.634718 | 7.1:-54378707 | MS.gene34812:CDS |
AACTTCATTGGTCAAACTGG+AGG | 0.635797 | 7.1:-54378270 | MS.gene34812:CDS |
GGAAGAATGGCAGCGCGTGG+AGG | 0.635935 | 7.1:-54378456 | MS.gene34812:CDS |
GGGACTGGAAATAATAATGT+TGG | 0.636868 | 7.1:-54377982 | MS.gene34812:CDS |
TGAGGTTGGTGAATGGAATG+GGG | 0.637750 | 7.1:-54378182 | MS.gene34812:CDS |
TTGATGGTGTCCAAGGCTGG+GGG | 0.640106 | 7.1:-54378545 | MS.gene34812:CDS |
GGGAAAGGTAAAATGGACGA+TGG | 0.640770 | 7.1:-54377799 | MS.gene34812:CDS |
GAATGAGAATAATAGTAATG+TGG | 0.641457 | 7.1:-54378382 | MS.gene34812:CDS |
AATTGGTGAAGCTATTTCTG+AGG | 0.645727 | 7.1:-54378901 | MS.gene34812:CDS |
AAATGCTGGAGGGAGAACTG+TGG | 0.646829 | 7.1:-54378514 | MS.gene34812:CDS |
ACTGTCAATAAGTGGCTCAG+AGG | 0.654912 | 7.1:-54378480 | MS.gene34812:CDS |
ATGCTGGAGGGAGAACTGTG+GGG | 0.658418 | 7.1:-54378512 | MS.gene34812:CDS |
GATTTACCAAGTGATGACAA+AGG | 0.658596 | 7.1:-54377820 | MS.gene34812:CDS |
GCTGGAGGGAGAACTGTGGG+GGG | 0.666204 | 7.1:-54378510 | MS.gene34812:CDS |
TGTGGGTGCTGACATTCATG+TGG | 0.668217 | 7.1:-54378139 | MS.gene34812:CDS |
GGAGATTCTTAAATGCTGGA+GGG | 0.674388 | 7.1:-54378524 | MS.gene34812:CDS |
CGTGTACGAGTCCTACGTGG+TGG | 0.678916 | 7.1:-54378321 | MS.gene34812:CDS |
GGAATGGGGTCTAACAATGG+AGG | 0.680286 | 7.1:-54378168 | MS.gene34812:CDS |
AAGTAAAACCTCCACCACGT+AGG | 0.699935 | 7.1:+54378310 | None:intergenic |
AAGTGCTAATGAGCAAGTTG+TGG | 0.704228 | 7.1:-54377710 | MS.gene34812:CDS |
GTGGGTGCTGACATTCATGT+GGG | 0.712535 | 7.1:-54378138 | MS.gene34812:CDS |
TACTCATTCATATACCCATG+TGG | 0.713978 | 7.1:+54378834 | None:intergenic |
TGTCCGATTTCAATTCATGG+AGG | 0.736135 | 7.1:-54379087 | MS.gene34812:CDS |
GTGCAGATGAACATTGACAC+AGG | 0.741639 | 7.1:-54377688 | MS.gene34812:CDS |
GGGCGTGTACGAGTCCTACG+TGG | 0.752444 | 7.1:-54378324 | MS.gene34812:CDS |
TACGCTGGGAGAGACATCAG+AGG | 0.758802 | 7.1:-54377959 | MS.gene34812:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATGATGAAAGTAATTATTA+TGG | - | chr7.1:54377137-54377156 | MS.gene34812:intron | 15.0% |
!! | GAAATATTAGATGTAAGTAA+AGG | - | chr7.1:54378618-54378637 | MS.gene34812:CDS | 20.0% |
!! | TTGTGGAATTTAATTCAAAA+GGG | + | chr7.1:54377679-54377698 | None:intergenic | 20.0% |
!! | TTTGTGGAATTTAATTCAAA+AGG | + | chr7.1:54377680-54377699 | None:intergenic | 20.0% |
!!! | AATTCAAGTTTATCAACAAT+AGG | + | chr7.1:54379161-54379180 | None:intergenic | 20.0% |
!!! | ACAATGTTTTCAGAAAATAA+AGG | + | chr7.1:54378292-54378311 | None:intergenic | 20.0% |
!!! | ATTCAAGTTTATCAACAATA+GGG | + | chr7.1:54379160-54379179 | None:intergenic | 20.0% |
!!! | ATTTTCTGAAAACATTGTAA+TGG | - | chr7.1:54378294-54378313 | MS.gene34812:CDS | 20.0% |
!!! | TTAACAAAACTTTTAAAGTC+TGG | + | chr7.1:54379110-54379129 | None:intergenic | 20.0% |
! | AAATCATTAGTTGGAATTGT+AGG | - | chr7.1:54378352-54378371 | MS.gene34812:CDS | 25.0% |
! | AATCATTAGTTGGAATTGTA+GGG | - | chr7.1:54378353-54378372 | MS.gene34812:CDS | 25.0% |
! | CTAATCAGATTACTATAATG+AGG | - | chr7.1:54377705-54377724 | MS.gene34812:CDS | 25.0% |
! | GAATGAGAATAATAGTAATG+TGG | - | chr7.1:54377523-54377542 | MS.gene34812:intron | 25.0% |
! | TAATAGTAATGTGGTTGTTA+TGG | - | chr7.1:54377532-54377551 | MS.gene34812:intron | 25.0% |
! | TATCTGATGTTTATTCTGTA+GGG | - | chr7.1:54378856-54378875 | MS.gene34812:CDS | 25.0% |
! | TTATCTGATGTTTATTCTGT+AGG | - | chr7.1:54378855-54378874 | MS.gene34812:CDS | 25.0% |
! | TTCTACTACTAATAAAACTG+AGG | - | chr7.1:54378461-54378480 | MS.gene34812:CDS | 25.0% |
!! | ATTCCAACTAATGATTTTCA+TGG | + | chr7.1:54378349-54378368 | None:intergenic | 25.0% |
!! | TTCAAGTTTATCAACAATAG+GGG | + | chr7.1:54379159-54379178 | None:intergenic | 25.0% |
!!! | AAAGTTTTGTTAACAGTACT+TGG | - | chr7.1:54379117-54379136 | MS.gene34812:CDS | 25.0% |
!!! | CAGAAAATAAAGGATTAGTT+TGG | + | chr7.1:54378282-54378301 | None:intergenic | 25.0% |
!!! | CTGACTCTTTTCTTTATTTT+TGG | + | chr7.1:54378139-54378158 | None:intergenic | 25.0% |
AAAGTAATTATTATGGCCCA+TGG | - | chr7.1:54377144-54377163 | MS.gene34812:intron | 30.0% | |
AAATAATAATGTTGGTACGC+TGG | - | chr7.1:54377931-54377950 | MS.gene34812:CDS | 30.0% | |
AAATAGTCTCACAAAGAAAG+AGG | + | chr7.1:54378443-54378462 | None:intergenic | 30.0% | |
AATAATAATGTTGGTACGCT+GGG | - | chr7.1:54377932-54377951 | MS.gene34812:CDS | 30.0% | |
ATATACGTGGTTCAAATGTT+TGG | - | chr7.1:54378884-54378903 | MS.gene34812:CDS | 30.0% | |
ATCATTAGTTGGAATTGTAG+GGG | - | chr7.1:54378354-54378373 | MS.gene34812:CDS | 30.0% | |
ATTAAGACCATTAAGACCAT+CGG | + | chr7.1:54377498-54377517 | None:intergenic | 30.0% | |
ATTCATGGTAGAATTGGAAA+TGG | + | chr7.1:54376911-54376930 | None:intergenic | 30.0% | |
ATTTACCAAGTGATGACAAA+GGG | - | chr7.1:54378086-54378105 | MS.gene34812:CDS | 30.0% | |
ATTTCCAATTCTACCATGAA+TGG | - | chr7.1:54376910-54376929 | MS.gene34812:intron | 30.0% | |
GACAGATGATTTCCAATATA+AGG | + | chr7.1:54378556-54378575 | None:intergenic | 30.0% | |
GGTTTAAATTTGAAAACGCA+TGG | - | chr7.1:54379075-54379094 | MS.gene34812:CDS | 30.0% | |
GTGCTCAAAAAACTTGAAAT+TGG | - | chr7.1:54376987-54377006 | MS.gene34812:intron | 30.0% | |
TAAACTTGAATTATGTGCTG+CGG | - | chr7.1:54379169-54379188 | MS.gene34812:CDS | 30.0% | |
TATACGTGGTTCAAATGTTT+GGG | - | chr7.1:54378885-54378904 | MS.gene34812:CDS | 30.0% | |
TCAGATTACTATAATGAGGT+TGG | - | chr7.1:54377709-54377728 | MS.gene34812:CDS | 30.0% | |
TCGTTTAAGTACGAAAGAAT+TGG | - | chr7.1:54377263-54377282 | MS.gene34812:intron | 30.0% | |
TTAAACTAGGAATTGTACGA+GGG | + | chr7.1:54378389-54378408 | None:intergenic | 30.0% | |
TTGGAAAGAGTTCTTCAAAA+TGG | - | chr7.1:54376936-54376955 | MS.gene34812:intron | 30.0% | |
TTTAAACTAGGAATTGTACG+AGG | + | chr7.1:54378390-54378409 | None:intergenic | 30.0% | |
TTTCCAATTCTACCATGAAT+GGG | - | chr7.1:54376911-54376930 | MS.gene34812:intron | 30.0% | |
! | AATCTGATTAGCTATGTTTG+TGG | + | chr7.1:54377696-54377715 | None:intergenic | 30.0% |
! | ATTGGCTTATCAATGGATTT+CGG | - | chr7.1:54378811-54378830 | MS.gene34812:CDS | 30.0% |
! | TGAGGAGTTAAAATACGTTT+TGG | - | chr7.1:54378479-54378498 | MS.gene34812:CDS | 30.0% |
! | TGCGTTTTCAAATTTAAACC+TGG | + | chr7.1:54379075-54379094 | None:intergenic | 30.0% |
! | TTCTGAAAACATTGTAATGG+CGG | - | chr7.1:54378297-54378316 | MS.gene34812:CDS | 30.0% |
!! | GTTCACACAAAAGCATTATA+GGG | + | chr7.1:54379025-54379044 | None:intergenic | 30.0% |
!!! | CTTTTCTTTATTTTTGGTGC+TGG | + | chr7.1:54378133-54378152 | None:intergenic | 30.0% |
AACAATGGAGGTAGTAATGT+GGG | - | chr7.1:54377749-54377768 | MS.gene34812:CDS | 35.0% | |
AACAGTACTTGGAATTCGTA+TGG | - | chr7.1:54379128-54379147 | MS.gene34812:CDS | 35.0% | |
AACTGGATGTAATCAAAGGT+TGG | - | chr7.1:54377877-54377896 | MS.gene34812:CDS | 35.0% | |
AATCCCATTCATGGTAGAAT+TGG | + | chr7.1:54376917-54376936 | None:intergenic | 35.0% | |
ACTGGATGTAATCAAAGGTT+GGG | - | chr7.1:54377878-54377897 | MS.gene34812:CDS | 35.0% | |
ATAGGGTAATGATCTGAAGA+GGG | + | chr7.1:54379008-54379027 | None:intergenic | 35.0% | |
ATGCTTCTTGGATGTCATAT+TGG | - | chr7.1:54377101-54377120 | MS.gene34812:intron | 35.0% | |
ATTATGGCTTTCCATCACAT+GGG | - | chr7.1:54378661-54378680 | MS.gene34812:CDS | 35.0% | |
ATTCTACCATGAATGGGATT+TGG | - | chr7.1:54376917-54376936 | MS.gene34812:intron | 35.0% | |
CAAATGTTTGGGAACTGATA+GGG | - | chr7.1:54378896-54378915 | MS.gene34812:CDS | 35.0% | |
CAGCCATGAAAATCATTAGT+TGG | - | chr7.1:54378343-54378362 | MS.gene34812:CDS | 35.0% | |
GAAATGTCACTGTCAATAAG+TGG | - | chr7.1:54377417-54377436 | MS.gene34812:intron | 35.0% | |
GATTTACCAAGTGATGACAA+AGG | - | chr7.1:54378085-54378104 | MS.gene34812:CDS | 35.0% | |
GGGACTGGAAATAATAATGT+TGG | - | chr7.1:54377923-54377942 | MS.gene34812:CDS | 35.0% | |
GGGTATATGAATGAGTATGT+AGG | - | chr7.1:54377077-54377096 | MS.gene34812:intron | 35.0% | |
GTCCTTTAATCATAAGGGAA+GGG | - | chr7.1:54378032-54378051 | MS.gene34812:CDS | 35.0% | |
TAACAATGGAGGTAGTAATG+TGG | - | chr7.1:54377748-54377767 | MS.gene34812:CDS | 35.0% | |
TACTCATTCATATACCCATG+TGG | + | chr7.1:54377074-54377093 | None:intergenic | 35.0% | |
TAGATGTAAGTAAAGGCAAG+TGG | - | chr7.1:54378625-54378644 | MS.gene34812:CDS | 35.0% | |
TATAGGGTAATGATCTGAAG+AGG | + | chr7.1:54379009-54379028 | None:intergenic | 35.0% | |
TATTATGGCTTTCCATCACA+TGG | - | chr7.1:54378660-54378679 | MS.gene34812:CDS | 35.0% | |
TCAAATGTTTGGGAACTGAT+AGG | - | chr7.1:54378895-54378914 | MS.gene34812:CDS | 35.0% | |
TCCTTTAATCATAAGGGAAG+GGG | - | chr7.1:54378033-54378052 | MS.gene34812:CDS | 35.0% | |
TCTCCTCCATGAATTGAAAT+CGG | + | chr7.1:54376824-54376843 | None:intergenic | 35.0% | |
TGACAAAGGGAAAGGTAAAA+TGG | - | chr7.1:54378099-54378118 | MS.gene34812:CDS | 35.0% | |
TGCTAACTGGATGTAATCAA+AGG | - | chr7.1:54377873-54377892 | MS.gene34812:CDS | 35.0% | |
TTATCGCCAACTGAAAAGAA+AGG | - | chr7.1:54378771-54378790 | MS.gene34812:CDS | 35.0% | |
! | AATGATGCTTTTGTGCTAAC+TGG | - | chr7.1:54377860-54377879 | MS.gene34812:CDS | 35.0% |
! | AGAGCAAATTGGCTTATCAA+TGG | - | chr7.1:54378804-54378823 | MS.gene34812:CDS | 35.0% |
! | ATGGTCTTTGAGAAAGAAGA+TGG | - | chr7.1:54377224-54377243 | MS.gene34812:intron | 35.0% |
! | CAGATAGCTTTTGTGCTAAA+AGG | - | chr7.1:54377321-54377340 | MS.gene34812:intron | 35.0% |
! | CTAATGATTTTCATGGCTGT+TGG | + | chr7.1:54378342-54378361 | None:intergenic | 35.0% |
!! | AATTGGTGAAGCTATTTCTG+AGG | - | chr7.1:54377004-54377023 | MS.gene34812:intron | 35.0% |
!! | ACTATAATGAGGTTGGTGAA+TGG | - | chr7.1:54377716-54377735 | MS.gene34812:CDS | 35.0% |
!! | AGGTTTTACTTTTCACAGGA+TGG | - | chr7.1:54377607-54377626 | MS.gene34812:intron | 35.0% |
!! | AGTTAGCACAAAAGCATCAT+TGG | + | chr7.1:54377861-54377880 | None:intergenic | 35.0% |
!! | GGTTCACACAAAAGCATTAT+AGG | + | chr7.1:54379026-54379045 | None:intergenic | 35.0% |
AAAAAGCCCTCAAAAGTCCA+GGG | + | chr7.1:54376963-54376982 | None:intergenic | 40.0% | |
AACATCAACGACTCTCCAAA+TGG | - | chr7.1:54376714-54376733 | MS.gene34812:intron | 40.0% | |
AACATTGACACAGGAAATGC+AGG | - | chr7.1:54378226-54378245 | MS.gene34812:CDS | 40.0% | |
AACTTCATTGGTCAAACTGG+AGG | - | chr7.1:54377635-54377654 | MS.gene34812:CDS | 40.0% | |
AAGTGCTAATGAGCAAGTTG+TGG | - | chr7.1:54378195-54378214 | MS.gene34812:CDS | 40.0% | |
AATGGAATGGGGTCTAACAA+TGG | - | chr7.1:54377734-54377753 | MS.gene34812:CDS | 40.0% | |
AATGTATATGCGCATTCGTG+TGG | - | chr7.1:54377169-54377188 | MS.gene34812:intron | 40.0% | |
AATGTGGTCAATTCTGATGC+AGG | - | chr7.1:54378058-54378077 | MS.gene34812:CDS | 40.0% | |
ACCTGTCCGATTTCAATTCA+TGG | - | chr7.1:54376815-54376834 | MS.gene34812:intron | 40.0% | |
ACGAACTTCATTGGTCAAAC+TGG | - | chr7.1:54377632-54377651 | MS.gene34812:CDS | 40.0% | |
AGGATGGTTACGAACTTCAT+TGG | - | chr7.1:54377623-54377642 | MS.gene34812:CDS | 40.0% | |
AGGTCTTTAATCTGCCACAT+GGG | - | chr7.1:54377057-54377076 | MS.gene34812:intron | 40.0% | |
AGTTGGAATTGTAGGGGATT+AGG | - | chr7.1:54378360-54378379 | MS.gene34812:CDS | 40.0% | |
ATGCGCATATACATTCTCCA+TGG | + | chr7.1:54377164-54377183 | None:intergenic | 40.0% | |
ATTAAAGGACCCGCAATGAT+TGG | + | chr7.1:54378022-54378041 | None:intergenic | 40.0% | |
ATTCATGTGGGAACAAATGC+TGG | - | chr7.1:54377779-54377798 | MS.gene34812:CDS | 40.0% | |
CAAATGTTTCAAACCTACCG+TGG | - | chr7.1:54378721-54378740 | MS.gene34812:CDS | 40.0% | |
CAGGAGACAAATAACAATGC+TGG | - | chr7.1:54378172-54378191 | MS.gene34812:CDS | 40.0% | |
CATAATCCTCATCAGCAATC+AGG | - | chr7.1:54377833-54377852 | MS.gene34812:CDS | 40.0% | |
CCTAGTCCGAGTTTATAAAC+CGG | - | chr7.1:54378413-54378432 | MS.gene34812:CDS | 40.0% | |
CTCTTTCCAAATCCCATTCA+TGG | + | chr7.1:54376926-54376945 | None:intergenic | 40.0% | |
GGAAAGGTAAAATGGACGAT+GGG | - | chr7.1:54378107-54378126 | MS.gene34812:CDS | 40.0% | |
GGAGATTCTTAAATGCTGGA+GGG | - | chr7.1:54377381-54377400 | MS.gene34812:intron | 40.0% | |
GGATGTCCGGTTTATAAACT+CGG | + | chr7.1:54378422-54378441 | None:intergenic | 40.0% | |
GGTCCTTTAATCATAAGGGA+AGG | - | chr7.1:54378031-54378050 | MS.gene34812:CDS | 40.0% | |
GTTGGAATTGTAGGGGATTA+GGG | - | chr7.1:54378361-54378380 | MS.gene34812:CDS | 40.0% | |
TAAAAAGCCCTCAAAAGTCC+AGG | + | chr7.1:54376964-54376983 | None:intergenic | 40.0% | |
TCACAAAGAAAGAGGATGTC+CGG | + | chr7.1:54378435-54378454 | None:intergenic | 40.0% | |
TCCATGAATTGAAATCGGAC+AGG | + | chr7.1:54376819-54376838 | None:intergenic | 40.0% | |
TGAAAACATTGTAATGGCGG+AGG | - | chr7.1:54378300-54378319 | MS.gene34812:CDS | 40.0% | |
TGCGCATATACATTCTCCAT+GGG | + | chr7.1:54377163-54377182 | None:intergenic | 40.0% | |
TGCGGGTCCTTTAATCATAA+GGG | - | chr7.1:54378027-54378046 | MS.gene34812:CDS | 40.0% | |
TGTCCGATTTCAATTCATGG+AGG | - | chr7.1:54376818-54376837 | MS.gene34812:intron | 40.0% | |
TTCATGTGGGAACAAATGCT+GGG | - | chr7.1:54377780-54377799 | MS.gene34812:CDS | 40.0% | |
TTGCGGGTCCTTTAATCATA+AGG | - | chr7.1:54378026-54378045 | MS.gene34812:CDS | 40.0% | |
TTTCAACGAAGCTGAAGTCT+GGG | - | chr7.1:54377031-54377050 | MS.gene34812:intron | 40.0% | |
TTTGTCTCCTGCTCAACATT+TGG | + | chr7.1:54378163-54378182 | None:intergenic | 40.0% | |
! | AAATTTTCCAGAACTGCACC+AGG | + | chr7.1:54378978-54378997 | None:intergenic | 40.0% |
! | AATTTTCCAGAACTGCACCA+GGG | + | chr7.1:54378977-54378996 | None:intergenic | 40.0% |
! | ATATTGCTGAACCTCTGAAG+AGG | - | chr7.1:54377198-54377217 | MS.gene34812:intron | 40.0% |
! | ATGATTTTCATGGCTGTTGG+CGG | + | chr7.1:54378339-54378358 | None:intergenic | 40.0% |
! | CGGACTAGGTACTTTAAACT+AGG | + | chr7.1:54378402-54378421 | None:intergenic | 40.0% |
! | CTGTAGGGTATTCATATACG+TGG | - | chr7.1:54378871-54378890 | MS.gene34812:CDS | 40.0% |
! | TGGCGTATGACTGGTTATTA+TGG | - | chr7.1:54378645-54378664 | MS.gene34812:CDS | 40.0% |
! | TGTTTTACTGTTGATCGCCA+AGG | - | chr7.1:54378513-54378532 | MS.gene34812:CDS | 40.0% |
!! | AATGAGGTTGGTGAATGGAA+TGG | - | chr7.1:54377721-54377740 | MS.gene34812:CDS | 40.0% |
!! | ATGAGGTTGGTGAATGGAAT+GGG | - | chr7.1:54377722-54377741 | MS.gene34812:CDS | 40.0% |
!! | GAGTCTTTTGCTATATCTGC+GGG | - | chr7.1:54377285-54377304 | MS.gene34812:intron | 40.0% |
!! | GGAGTCTTTTGCTATATCTG+CGG | - | chr7.1:54377284-54377303 | MS.gene34812:intron | 40.0% |
!! | GTGGAGGTTTTACTTTTCAC+AGG | - | chr7.1:54377603-54377622 | MS.gene34812:intron | 40.0% |
AACCTACCGTGGTGTATTCT+CGG | - | chr7.1:54378732-54378751 | MS.gene34812:CDS | 45.0% | |
AAGTAAAACCTCCACCACGT+AGG | + | chr7.1:54377598-54377617 | None:intergenic | 45.0% | |
ACGCATCAGTTGCTAAAGCA+CGG | + | chr7.1:54378941-54378960 | None:intergenic | 45.0% | |
ACTGTCAATAAGTGGCTCAG+AGG | - | chr7.1:54377425-54377444 | MS.gene34812:intron | 45.0% | |
AGGAGAGACTTCCATCAATC+TGG | - | chr7.1:54376838-54376857 | MS.gene34812:intron | 45.0% | |
AGTCAGACCAAATGTTGAGC+AGG | - | chr7.1:54378153-54378172 | MS.gene34812:CDS | 45.0% | |
ATGAAAGTGATTCCTGCTCC+AGG | + | chr7.1:54379204-54379223 | None:intergenic | 45.0% | |
ATTGCTTGAGCTTTGCGTTG+TGG | - | chr7.1:54376773-54376792 | MS.gene34812:intron | 45.0% | |
CAAGTGAGCATACGCTGTTT+GGG | - | chr7.1:54377561-54377580 | MS.gene34812:intron | 45.0% | |
CAGGTCTTTAATCTGCCACA+TGG | - | chr7.1:54377056-54377075 | MS.gene34812:intron | 45.0% | |
CCAAGTGATGACAAAGGGAA+AGG | - | chr7.1:54378091-54378110 | MS.gene34812:CDS | 45.0% | |
CCGGTTTATAAACTCGGACT+AGG | + | chr7.1:54378416-54378435 | None:intergenic | 45.0% | |
CCTTCAAGACCAATCATTGC+GGG | - | chr7.1:54378010-54378029 | MS.gene34812:CDS | 45.0% | |
CCTTTCCCTTTGTCATCACT+TGG | + | chr7.1:54378094-54378113 | None:intergenic | 45.0% | |
CTCCAAATGGATCCTCTACT+GGG | - | chr7.1:54376727-54376746 | MS.gene34812:intron | 45.0% | |
CTGATAGGGCTGTTGAAGAA+AGG | - | chr7.1:54378910-54378929 | MS.gene34812:CDS | 45.0% | |
CTTGAACCAGGATTCGTTGA+TGG | - | chr7.1:54377344-54377363 | MS.gene34812:intron | 45.0% | |
CTTTCAACGAAGCTGAAGTC+TGG | - | chr7.1:54377030-54377049 | MS.gene34812:intron | 45.0% | |
GAGCTGCTTGGGAATTTCTA+AGG | - | chr7.1:54378691-54378710 | MS.gene34812:CDS | 45.0% | |
GAGTATGTAGGCATGCTTCT+TGG | - | chr7.1:54377089-54377108 | MS.gene34812:intron | 45.0% | |
GAGTTCTTCAAAATGGTCCC+TGG | - | chr7.1:54376943-54376962 | MS.gene34812:intron | 45.0% | |
GCAGGAGTGAAAGAGCAAAT+TGG | - | chr7.1:54378793-54378812 | MS.gene34812:CDS | 45.0% | |
GCCCCTTCCCTTATGATTAA+AGG | + | chr7.1:54378037-54378056 | None:intergenic | 45.0% | |
GCCTTCAAGACCAATCATTG+CGG | - | chr7.1:54378009-54378028 | MS.gene34812:CDS | 45.0% | |
GGGAAAGGTAAAATGGACGA+TGG | - | chr7.1:54378106-54378125 | MS.gene34812:CDS | 45.0% | |
GGGAGATTCTTAAATGCTGG+AGG | - | chr7.1:54377380-54377399 | MS.gene34812:intron | 45.0% | |
GGTCAATTCTGATGCAGGAA+AGG | - | chr7.1:54378063-54378082 | MS.gene34812:CDS | 45.0% | |
GTGCAGATGAACATTGACAC+AGG | - | chr7.1:54378217-54378236 | MS.gene34812:CDS | 45.0% | |
GTGGAGGTCTTGCCTTATAT+TGG | - | chr7.1:54378541-54378560 | MS.gene34812:CDS | 45.0% | |
TCAAGTGAGCATACGCTGTT+TGG | - | chr7.1:54377560-54377579 | MS.gene34812:intron | 45.0% | |
TCATTGGTCAAACTGGAGGA+GGG | - | chr7.1:54377639-54377658 | MS.gene34812:CDS | 45.0% | |
TCTCCAAATGGATCCTCTAC+TGG | - | chr7.1:54376726-54376745 | MS.gene34812:intron | 45.0% | |
TGGGGGAGATTCTTAAATGC+TGG | - | chr7.1:54377377-54377396 | MS.gene34812:intron | 45.0% | |
TGTGCTAAAAGGCTTGAACC+AGG | - | chr7.1:54377332-54377351 | MS.gene34812:intron | 45.0% | |
TTCATTGGTCAAACTGGAGG+AGG | - | chr7.1:54377638-54377657 | MS.gene34812:CDS | 45.0% | |
TTGCTTGAGCTTTGCGTTGT+GGG | - | chr7.1:54376774-54376793 | MS.gene34812:intron | 45.0% | |
TTGGTACCTGATTGCTGATG+AGG | + | chr7.1:54377842-54377861 | None:intergenic | 45.0% | |
! | AAATGGTCCCTGGACTTTTG+AGG | - | chr7.1:54376953-54376972 | MS.gene34812:intron | 45.0% |
! | AATGGTCCCTGGACTTTTGA+GGG | - | chr7.1:54376954-54376973 | MS.gene34812:intron | 45.0% |
! | CTCCTGCCTTTCTTTTCAGT+TGG | + | chr7.1:54378780-54378799 | None:intergenic | 45.0% |
! | GAACCTGTTTTCACCAGCTT+GGG | + | chr7.1:54376889-54376908 | None:intergenic | 45.0% |
! | TAATGATCTGAAGAGGGTGC+TGG | + | chr7.1:54379002-54379021 | None:intergenic | 45.0% |
! | TGATTTTCATGGCTGTTGGC+GGG | + | chr7.1:54378338-54378357 | None:intergenic | 45.0% |
! | TGCTATATCTGCGGGCTATT+GGG | - | chr7.1:54377293-54377312 | MS.gene34812:intron | 45.0% |
! | TTGCTATATCTGCGGGCTAT+TGG | - | chr7.1:54377292-54377311 | MS.gene34812:intron | 45.0% |
!! | TGAGGTTGGTGAATGGAATG+GGG | - | chr7.1:54377723-54377742 | MS.gene34812:CDS | 45.0% |
!! | TGGTGAAGCTATTTCTGAGG+TGG | - | chr7.1:54377007-54377026 | MS.gene34812:intron | 45.0% |
AAAGGCAAGTGGCGTATGAC+TGG | - | chr7.1:54378636-54378655 | MS.gene34812:CDS | 50.0% | |
AAATGCTGGAGGGAGAACTG+TGG | - | chr7.1:54377391-54377410 | MS.gene34812:intron | 50.0% | |
AAGACCATGCTCCTCTTCAG+AGG | + | chr7.1:54377212-54377231 | None:intergenic | 50.0% | |
AAGTCGCCGAGAATACACCA+CGG | + | chr7.1:54378741-54378760 | None:intergenic | 50.0% | |
AATGCTGGAGGGAGAACTGT+GGG | - | chr7.1:54377392-54377411 | MS.gene34812:intron | 50.0% | |
AGGAAATGCAGGAGATGGCT+TGG | - | chr7.1:54378237-54378256 | MS.gene34812:CDS | 50.0% | |
ATTCTGAGCATCTGTGGGAC+TGG | - | chr7.1:54377908-54377927 | MS.gene34812:CDS | 50.0% | |
ATTGGTCAAACTGGAGGAGG+GGG | - | chr7.1:54377641-54377660 | MS.gene34812:CDS | 50.0% | |
CAGTTCAGATGACCCAGTAG+AGG | + | chr7.1:54376742-54376761 | None:intergenic | 50.0% | |
CATAAGGGAAGGGGCTAATG+TGG | - | chr7.1:54378042-54378061 | MS.gene34812:CDS | 50.0% | |
CATTGGTCAAACTGGAGGAG+GGG | - | chr7.1:54377640-54377659 | MS.gene34812:CDS | 50.0% | |
CGCCAACTGAAAAGAAAGGC+AGG | - | chr7.1:54378775-54378794 | MS.gene34812:CDS | 50.0% | |
CGGATTTATCTACCTGGAGC+AGG | - | chr7.1:54379189-54379208 | MS.gene34812:CDS | 50.0% | |
GACACAGGAAATGCAGGAGA+TGG | - | chr7.1:54378232-54378251 | MS.gene34812:CDS | 50.0% | |
GACCCAGTAGAGGATCCATT+TGG | + | chr7.1:54376732-54376751 | None:intergenic | 50.0% | |
GCTTTCCATCACATGGGAGA+CGG | - | chr7.1:54378667-54378686 | MS.gene34812:CDS | 50.0% | |
GGAAATGCAGGAGATGGCTT+GGG | - | chr7.1:54378238-54378257 | MS.gene34812:CDS | 50.0% | |
GGAATGGGGTCTAACAATGG+AGG | - | chr7.1:54377737-54377756 | MS.gene34812:CDS | 50.0% | |
GTCAATAAGTGGCTCAGAGG+TGG | - | chr7.1:54377428-54377447 | MS.gene34812:intron | 50.0% | |
GTCCCACAGATGCTCAGAAT+CGG | + | chr7.1:54377908-54377927 | None:intergenic | 50.0% | |
GTGATTGTAACACCCTGACC+AGG | + | chr7.1:54376867-54376886 | None:intergenic | 50.0% | |
GTGCTGCGGATTTATCTACC+TGG | - | chr7.1:54379183-54379202 | MS.gene34812:CDS | 50.0% | |
GTGCTTTAGCAACTGATGCG+TGG | - | chr7.1:54378940-54378959 | MS.gene34812:CDS | 50.0% | |
TCACCCAAGCTGGTGAAAAC+AGG | - | chr7.1:54376883-54376902 | MS.gene34812:intron | 50.0% | |
TCATTTCCCTGGTGCAGTTC+TGG | - | chr7.1:54378968-54378987 | MS.gene34812:CDS | 50.0% | |
TGGACACCATCAACGAATCC+TGG | + | chr7.1:54377353-54377372 | None:intergenic | 50.0% | |
TTAAGAATCTCCCCCAGCCT+TGG | + | chr7.1:54377373-54377392 | None:intergenic | 50.0% | |
! | AACATTGTAATGGCGGAGGC+TGG | - | chr7.1:54378304-54378323 | MS.gene34812:CDS | 50.0% |
! | AGCCGATTCTGAGCATCTGT+GGG | - | chr7.1:54377903-54377922 | MS.gene34812:CDS | 50.0% |
! | GATTTTCATGGCTGTTGGCG+GGG | + | chr7.1:54378337-54378356 | None:intergenic | 50.0% |
! | GGAACCTGTTTTCACCAGCT+TGG | + | chr7.1:54376890-54376909 | None:intergenic | 50.0% |
! | GGTGGTTCCGATGGTCTTAA+TGG | - | chr7.1:54377488-54377507 | MS.gene34812:intron | 50.0% |
! | GGTGTTACAATCACCCAAGC+TGG | - | chr7.1:54376873-54376892 | MS.gene34812:intron | 50.0% |
! | TGAACCTCTGAAGAGGAGCA+TGG | - | chr7.1:54377205-54377224 | MS.gene34812:intron | 50.0% |
!! | CCCGCAATGATTGGTCTTGA+AGG | + | chr7.1:54378013-54378032 | None:intergenic | 50.0% |
!! | GGATTCGTTGATGGTGTCCA+AGG | - | chr7.1:54377353-54377372 | MS.gene34812:intron | 50.0% |
!! | GTGGGTGCTGACATTCATGT+GGG | - | chr7.1:54377767-54377786 | MS.gene34812:CDS | 50.0% |
!! | TGTGGGTGCTGACATTCATG+TGG | - | chr7.1:54377766-54377785 | MS.gene34812:CDS | 50.0% |
ATCAATCTGGCGTCCTGGTC+AGG | - | chr7.1:54376851-54376870 | MS.gene34812:intron | 55.0% | |
ATGCTGGAGGGAGAACTGTG+GGG | - | chr7.1:54377393-54377412 | MS.gene34812:intron | 55.0% | |
CAAGACCTCCACTACGTCCT+TGG | + | chr7.1:54378533-54378552 | None:intergenic | 55.0% | |
CACAGATGCTCAGAATCGGC+TGG | + | chr7.1:54377904-54377923 | None:intergenic | 55.0% | |
CGAAGCTGAAGTCTGGGTTC+AGG | - | chr7.1:54377037-54377056 | MS.gene34812:intron | 55.0% | |
CGGAATGCTGTTAGTGACGC+AGG | - | chr7.1:54378831-54378850 | MS.gene34812:CDS | 55.0% | |
CTTCCATCAATCTGGCGTCC+TGG | - | chr7.1:54376846-54376865 | MS.gene34812:intron | 55.0% | |
GACAGACGCGCAATCATTCC+AGG | - | chr7.1:54379054-54379073 | MS.gene34812:CDS | 55.0% | |
GCGTGGCAGAATCATTTCCC+TGG | - | chr7.1:54378957-54378976 | MS.gene34812:CDS | 55.0% | |
GTGGCTCAGAGGTGGAAGAA+TGG | - | chr7.1:54377436-54377455 | MS.gene34812:intron | 55.0% | |
GTTGATCGCCAAGGACGTAG+TGG | - | chr7.1:54378522-54378541 | MS.gene34812:CDS | 55.0% | |
TACGCTGGGAGAGACATCAG+AGG | - | chr7.1:54377946-54377965 | MS.gene34812:CDS | 55.0% | |
TCAATCTGGCGTCCTGGTCA+GGG | - | chr7.1:54376852-54376871 | MS.gene34812:intron | 55.0% | |
TGACCAGGACGCCAGATTGA+TGG | + | chr7.1:54376852-54376871 | None:intergenic | 55.0% | |
TGCTGGGAGTCAACAGAGTG+AGG | - | chr7.1:54377796-54377815 | MS.gene34812:CDS | 55.0% | |
TGGGAGAGACATCAGAGGCA+GGG | - | chr7.1:54377951-54377970 | MS.gene34812:CDS | 55.0% | |
! | AATGCAGGAGATGGCTTGGG+AGG | - | chr7.1:54378241-54378260 | MS.gene34812:CDS | 55.0% |
! | CAGCCGATTCTGAGCATCTG+TGG | - | chr7.1:54377902-54377921 | MS.gene34812:CDS | 55.0% |
!! | AGAGTGAGGTGCTGCTGACA+GGG | - | chr7.1:54377810-54377829 | MS.gene34812:CDS | 55.0% |
!! | CGTTGATGGTGTCCAAGGCT+GGG | - | chr7.1:54377358-54377377 | MS.gene34812:intron | 55.0% |
!! | GTTGATGGTGTCCAAGGCTG+GGG | - | chr7.1:54377359-54377378 | MS.gene34812:intron | 55.0% |
!! | TCGTTGATGGTGTCCAAGGC+TGG | - | chr7.1:54377357-54377376 | MS.gene34812:intron | 55.0% |
!! | TTGATGGTGTCCAAGGCTGG+GGG | - | chr7.1:54377360-54377379 | MS.gene34812:intron | 55.0% |
ATGGGAGACGGAGAGCTGCT+TGG | - | chr7.1:54378679-54378698 | MS.gene34812:CDS | 60.0% | |
CGCCGAGAATACACCACGGT+AGG | + | chr7.1:54378737-54378756 | None:intergenic | 60.0% | |
CGTGTACGAGTCCTACGTGG+TGG | - | chr7.1:54377584-54377603 | MS.gene34812:intron | 60.0% | |
CTGGGAGAGACATCAGAGGC+AGG | - | chr7.1:54377950-54377969 | MS.gene34812:CDS | 60.0% | |
GATCGCCAAGGACGTAGTGG+AGG | - | chr7.1:54378525-54378544 | MS.gene34812:CDS | 60.0% | |
GCTCTCCGTCTCCCATGTGA+TGG | + | chr7.1:54378675-54378694 | None:intergenic | 60.0% | |
GGAGGTCGTAATGCTGGTCG+AGG | - | chr7.1:54377467-54377486 | MS.gene34812:intron | 60.0% | |
GGTCGTAATGCTGGTCGAGG+TGG | - | chr7.1:54377470-54377489 | MS.gene34812:intron | 60.0% | |
GTACGAGTCCTACGTGGTGG+AGG | - | chr7.1:54377587-54377606 | MS.gene34812:intron | 60.0% | |
GTCAAACTGGAGGAGGGGGT+GGG | - | chr7.1:54377645-54377664 | MS.gene34812:CDS | 60.0% | |
TGCTGGAGGGAGAACTGTGG+GGG | - | chr7.1:54377394-54377413 | MS.gene34812:intron | 60.0% | |
TGGGAGACGGAGAGCTGCTT+GGG | - | chr7.1:54378680-54378699 | MS.gene34812:CDS | 60.0% | |
TTGCGCGTCTGTCTCACGCA+CGG | + | chr7.1:54379047-54379066 | None:intergenic | 60.0% | |
!! | CAGAGTGAGGTGCTGCTGAC+AGG | - | chr7.1:54377809-54377828 | MS.gene34812:CDS | 60.0% |
GCGCGTGGAGGTCGTAATGC+TGG | - | chr7.1:54377461-54377480 | MS.gene34812:intron | 65.0% | |
GCTGGAGGGAGAACTGTGGG+GGG | - | chr7.1:54377395-54377414 | MS.gene34812:intron | 65.0% | |
GCTGGTCGAGGTGGTTCCGA+TGG | - | chr7.1:54377479-54377498 | MS.gene34812:intron | 65.0% | |
GGAAGAATGGCAGCGCGTGG+AGG | - | chr7.1:54377449-54377468 | MS.gene34812:intron | 65.0% | |
GGGCGTGTACGAGTCCTACG+TGG | - | chr7.1:54377581-54377600 | MS.gene34812:intron | 65.0% | |
GGTCAAACTGGAGGAGGGGG+TGG | - | chr7.1:54377644-54377663 | MS.gene34812:CDS | 65.0% | |
GGTGGAAGAATGGCAGCGCG+TGG | - | chr7.1:54377446-54377465 | MS.gene34812:intron | 65.0% | |
TTCATGGCTGTTGGCGGGGC+TGG | + | chr7.1:54378333-54378352 | None:intergenic | 65.0% | |
GACATCAGAGGCAGGGCGCG+TGG | - | chr7.1:54377958-54377977 | MS.gene34812:CDS | 70.0% | |
CTGGAGGAGGGGGTGGGCAG+TGG | - | chr7.1:54377651-54377670 | MS.gene34812:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 54376696 | 54379231 | 54376696 | ID=MS.gene34812 |
chr7.1 | mRNA | 54376696 | 54379231 | 54376696 | ID=MS.gene34812.t1;Parent=MS.gene34812 |
chr7.1 | exon | 54377618 | 54379231 | 54377618 | ID=MS.gene34812.t1.exon1;Parent=MS.gene34812.t1 |
chr7.1 | CDS | 54377618 | 54379231 | 54377618 | ID=cds.MS.gene34812.t1;Parent=MS.gene34812.t1 |
chr7.1 | exon | 54376696 | 54376716 | 54376696 | ID=MS.gene34812.t1.exon2;Parent=MS.gene34812.t1 |
chr7.1 | CDS | 54376696 | 54376716 | 54376696 | ID=cds.MS.gene34812.t1;Parent=MS.gene34812.t1 |
Gene Sequence |
Protein sequence |