AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0633880


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0633880 MtrunA17_Chr4g0012941 83.333 72 11 1 7 77 7 78 2.13e-30 107
Msa0633880 MtrunA17_Chr4g0012951 60.000 70 25 2 90 159 28 94 5.52e-18 75.9
Msa0633880 MtrunA17_Chr4g0013001 55.556 72 29 2 88 159 26 94 2.76e-16 71.6
Msa0633880 MtrunA17_Chr4g0012961 55.556 72 29 2 88 159 26 94 2.76e-16 71.6
Msa0633880 MtrunA17_Chr4g0012991 53.086 81 34 3 80 159 72 149 4.96e-16 72.4
Msa0633880 MtrunA17_Chr4g0012931 45.783 83 45 0 11 93 51 133 6.68e-16 71.2
Msa0633880 MtrunA17_Chr4g0013211 45.205 73 37 2 92 164 30 99 2.34e-12 61.2
Msa0633880 MtrunA17_Chr2g0309241 45.763 59 32 0 92 150 30 88 6.24e-12 60.1
Msa0633880 MtrunA17_Chr4g0012891 35.455 110 62 3 72 180 15 116 6.83e-12 60.1
Msa0633880 MtrunA17_Chr4g0013261 50.000 68 31 2 92 159 31 95 1.49e-11 59.3
Msa0633880 MtrunA17_Chr4g0013251 42.857 77 41 2 83 159 22 95 2.37e-11 58.5
Msa0633880 MtrunA17_Chr7g0233431 46.939 49 26 0 98 146 51 99 5.32e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0633880 AT2G18370.1 41.270 63 37 0 88 150 27 89 1.92e-11 59.3

Find 51 sgRNAs with CRISPR-Local

Find 625 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTCTAGCTATAATATTTC+TGG 0.126345 4_3:+20067608 Msa0633880:CDS
TTCACTGCTTCACAACAATA+TGG 0.222130 4_3:-20059177 None:intergenic
TAAGAGGAGGAGGGCATAGA+AGG 0.308501 4_3:-20069224 None:intergenic
GAATACCACATAAGGCAAAT+AGG 0.312154 4_3:-20059308 None:intergenic
GTCACTTTACAGCATCAATT+AGG 0.372369 4_3:+20069115 Msa0633880:intron
AGAAGACTTAGAACCATGTT+TGG 0.379129 4_3:+20067463 Msa0633880:CDS
AGAACCATGTTTGGGATACT+TGG 0.387720 4_3:+20067472 Msa0633880:CDS
AATACCACATAAGGCAAATA+GGG 0.405661 4_3:-20059307 None:intergenic
CGGTTATATTTACAGAATCA+AGG 0.405747 4_3:+20061981 Msa0633880:intron
GGTCGTTGCATGTCTCGTTT+TGG 0.415995 4_3:+20059044 Msa0633880:exon
AGTTGATATCGCGAGTAATC+TGG 0.431895 4_3:-20059341 None:intergenic
GTGGAAGTTGTGGCGGATGT+TGG 0.448150 4_3:+20062006 Msa0633880:CDS
AGCAATTGCACACAGTTTGA+CGG 0.449773 4_3:-20067574 None:intergenic
TTGTGACTGCTTGAGAGATA+TGG 0.453187 4_3:+20059245 Msa0633880:CDS
GAGAATAAGAATGAAAATGA+AGG 0.461833 4_3:+20069195 Msa0633880:CDS
GAAGACTTAGAACCATGTTT+GGG 0.462299 4_3:+20067464 Msa0633880:CDS
TACTATACTAACAATATAAG+AGG 0.462898 4_3:-20069240 None:intergenic
GAGAAGTTACAGAGGAAGAA+GGG 0.465848 4_3:+20069144 Msa0633880:CDS
TCACTGCTTCACAACAATAT+GGG 0.474158 4_3:-20059176 None:intergenic
AGAGAAGTTACAGAGGAAGA+AGG 0.475684 4_3:+20069143 Msa0633880:CDS
TATAATATTTCTGGTGAGGA+AGG 0.478985 4_3:+20067617 Msa0633880:CDS
GCTGCCCTATTTGCCTTATG+TGG 0.498988 4_3:+20059303 Msa0633880:CDS
CCGCCACAACACTGTGATGA+AGG 0.500549 4_3:-20067512 None:intergenic
AAGAGGAGGAGGGCATAGAA+GGG 0.505982 4_3:-20069223 None:intergenic
GGGTGTTTGAATACCACATA+AGG 0.517200 4_3:-20059316 None:intergenic
AGAATAAGAATGAAAATGAA+GGG 0.519205 4_3:+20069196 Msa0633880:CDS
AGTAATGCTGCGGCGCTCCC+CGG 0.521309 4_3:+20067641 Msa0633880:CDS
ACTAACAATATAAGAGGAGG+AGG 0.535802 4_3:-20069234 None:intergenic
TTCTTTAAAGACTTTGAGTG+TGG 0.544723 4_3:+20059272 Msa0633880:CDS
AAAACAATAGGCAGGGATGA+AGG 0.546942 4_3:+20059023 Msa0633880:five_prime_UTR
AATCAAGGGTGTGGAAGTTG+TGG 0.551229 4_3:+20061996 Msa0633880:CDS
TATTTACAGAATCAAGGGTG+TGG 0.556405 4_3:+20061987 Msa0633880:intron
TAGCTATAATATTTCTGGTG+AGG 0.560127 4_3:+20067613 Msa0633880:CDS
TTGTGGCGGATGTTGGATCA+AGG 0.564536 4_3:+20062013 Msa0633880:CDS
GGTTATATTTACAGAATCAA+GGG 0.564696 4_3:+20061982 Msa0633880:intron
AAGACTTTGAGTGTGGAGAA+TGG 0.572741 4_3:+20059279 Msa0633880:CDS
CCCACCAAGTATCCCAAACA+TGG 0.606785 4_3:-20067476 None:intergenic
ATAATATTTCTGGTGAGGAA+GGG 0.606865 4_3:+20067618 Msa0633880:CDS
ACCATGTTTGGGATACTTGG+TGG 0.608948 4_3:+20067475 Msa0633880:CDS
TCTCCTTCATCACAGTGTTG+TGG 0.609729 4_3:+20067509 Msa0633880:CDS
GATATCGCGAGTAATCTGGT+AGG 0.618889 4_3:-20059337 None:intergenic
CCTTCATCACAGTGTTGTGG+CGG 0.620582 4_3:+20067512 Msa0633880:CDS
ATATCGCGAGTAATCTGGTA+GGG 0.629903 4_3:-20059336 None:intergenic
GAATAAGAATGAAAATGAAG+GGG 0.635612 4_3:+20069197 Msa0633880:CDS
TAGACGATCATCATAGTCGA+TGG 0.640137 4_3:-20059217 None:intergenic
CCATGTTTGGGATACTTGGT+GGG 0.649638 4_3:+20067476 Msa0633880:CDS
CAAGGGTGTGGAAGTTGTGG+CGG 0.655854 4_3:+20061999 Msa0633880:CDS
TATACTAACAATATAAGAGG+AGG 0.658569 4_3:-20069237 None:intergenic
GGCTTGAAGAGAAGTTACAG+AGG 0.658911 4_3:+20069136 Msa0633880:CDS
CTAACAATATAAGAGGAGGA+GGG 0.676112 4_3:-20069233 None:intergenic
TGAGGAAGGGAGTAATGCTG+CGG 0.679521 4_3:+20067631 Msa0633880:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGTTATATTATGTTTATTT+TGG + chr4_3:20059865-20059884 Msa0633880:intron 10.0%
!!! TGTTATATTATGTTTATTTT+GGG + chr4_3:20059866-20059885 Msa0633880:intron 10.0%
!! AAAAAAATTGATAAAGTATA+TGG + chr4_3:20060138-20060157 Msa0633880:intron 10.0%
!! TAAAATAAACAATTTAGTTA+AGG + chr4_3:20060290-20060309 Msa0633880:intron 10.0%
!!! TTTATCTAAATTCATTTTTA+AGG - chr4_3:20060449-20060468 None:intergenic 10.0%
!! AAAATATAGTAAAATATATC+AGG - chr4_3:20060565-20060584 None:intergenic 10.0%
!! AAATTATCCTTAAAAAAAAA+AGG - chr4_3:20060635-20060654 None:intergenic 10.0%
!!! TTTTTTTTAACAAACAAAAA+TGG - chr4_3:20061284-20061303 None:intergenic 10.0%
!!! AATTTAAAACTTTTTCTTTA+TGG + chr4_3:20061860-20061879 Msa0633880:intron 10.0%
!! CAAATTTAAATAAGAAAATA+AGG - chr4_3:20062112-20062131 None:intergenic 10.0%
!! AAAACAAATAAAAATGAAAT+TGG + chr4_3:20062521-20062540 Msa0633880:intron 10.0%
!!! ATTATTATGTTTTTAAAGAT+GGG - chr4_3:20063440-20063459 None:intergenic 10.0%
!!! AATTATTATGTTTTTAAAGA+TGG - chr4_3:20063441-20063460 None:intergenic 10.0%
!!! ATAAAAAAACAATTTTTTAG+AGG + chr4_3:20063474-20063493 Msa0633880:intron 10.0%
!!! ATACAATAGAATTTTTTTTT+TGG - chr4_3:20065274-20065293 None:intergenic 10.0%
!! TAAAAATGATATGTATAATA+TGG + chr4_3:20065449-20065468 Msa0633880:intron 10.0%
!!! ATTACATTTTTTTTAAAAGA+GGG - chr4_3:20066303-20066322 None:intergenic 10.0%
!!! AATTACATTTTTTTTAAAAG+AGG - chr4_3:20066304-20066323 None:intergenic 10.0%
!! TTAAAGAAATTAATAGAAAA+TGG - chr4_3:20066386-20066405 None:intergenic 10.0%
!! CAAAAAAAAAAAAAAAGATA+AGG + chr4_3:20066659-20066678 Msa0633880:intron 10.0%
!! AAAAAAAAAAAAAAGATAAG+GGG + chr4_3:20066661-20066680 Msa0633880:intron 10.0%
!! TTTAGTTACATTTAAAAAAT+TGG + chr4_3:20067826-20067845 Msa0633880:intron 10.0%
!! AAAAATAATATATATCATGT+TGG + chr4_3:20068292-20068311 Msa0633880:intron 10.0%
!!! TCATATATTAAATTTGTTTT+AGG - chr4_3:20068451-20068470 None:intergenic 10.0%
!!! TTAAACAATTTTTTTACATA+AGG + chr4_3:20068871-20068890 Msa0633880:intron 10.0%
!!! AGTAAGAGTATAAATAATAA+AGG - chr4_3:20059115-20059134 None:intergenic 15.0%
!! TAACCTTAAATATCTAATAT+GGG - chr4_3:20060184-20060203 None:intergenic 15.0%
!! TTAACCTTAAATATCTAATA+TGG - chr4_3:20060185-20060204 None:intergenic 15.0%
!! TAAAATATATCAGGAAATAA+CGG - chr4_3:20060556-20060575 None:intergenic 15.0%
!!! GTTCAAATATTTTTCATTTA+AGG - chr4_3:20060846-20060865 None:intergenic 15.0%
!!! TACTTTTGTTGATTATTTAA+TGG + chr4_3:20061567-20061586 Msa0633880:intron 15.0%
!! TCAAAATTGAATATTAGTTA+AGG + chr4_3:20061753-20061772 Msa0633880:intron 15.0%
!! CAAAATTGAATATTAGTTAA+GGG + chr4_3:20061754-20061773 Msa0633880:intron 15.0%
!! ATGCAAATACATATTATATT+TGG - chr4_3:20061792-20061811 None:intergenic 15.0%
!! AATATAATATGTATTTGCAT+TGG + chr4_3:20061792-20061811 Msa0633880:intron 15.0%
!!! ATAAATTTCTTATTTACCTT+TGG - chr4_3:20061945-20061964 None:intergenic 15.0%
!!! TTATTAATGACTTCTTTTAT+CGG + chr4_3:20061961-20061980 Msa0633880:intron 15.0%
!! TGAGTTTAAAAATTAACAAA+TGG - chr4_3:20062626-20062645 None:intergenic 15.0%
!!! ATTTGAAATTGAAATTGTTT+TGG + chr4_3:20062932-20062951 Msa0633880:intron 15.0%
!! TTTATTTCATCCTAAAATTA+GGG - chr4_3:20063399-20063418 None:intergenic 15.0%
!! TATAGATAAATAATTATGTG+TGG + chr4_3:20063501-20063520 Msa0633880:intron 15.0%
!! AGACAAAAAAAATAAATAAG+TGG + chr4_3:20064011-20064030 Msa0633880:intron 15.0%
!! AAAAAAAATAAATAAGTGGT+GGG + chr4_3:20064015-20064034 Msa0633880:intron 15.0%
!! ATTGAAAATGATATGTATAA+TGG + chr4_3:20065383-20065402 Msa0633880:intron 15.0%
!! TAATATTGAAACCATAAAAT+CGG + chr4_3:20065636-20065655 Msa0633880:intron 15.0%
!!! ATTTTAAATCATCAAGAAAT+TGG + chr4_3:20065739-20065758 Msa0633880:intron 15.0%
!!! TTTTAAATCATCAAGAAATT+GGG + chr4_3:20065740-20065759 Msa0633880:intron 15.0%
!!! TTTTCAAAATAAATCAAAGT+AGG - chr4_3:20065783-20065802 None:intergenic 15.0%
!! TTCAAAAAAAGAAAATTATG+TGG - chr4_3:20065951-20065970 None:intergenic 15.0%
!!! TTCTTAACATATTTCATTTT+TGG - chr4_3:20065999-20066018 None:intergenic 15.0%
!! ATGAAATATGTTAAGAAAAA+CGG + chr4_3:20066002-20066021 Msa0633880:intron 15.0%
!!! TGAATGAAATATTTAATTTG+AGG + chr4_3:20066515-20066534 Msa0633880:intron 15.0%
!!! TTTTTTTTTTGACAAATGTA+TGG - chr4_3:20066650-20066669 None:intergenic 15.0%
!! TAAGCAAAAATTCATATATT+AGG + chr4_3:20066740-20066759 Msa0633880:intron 15.0%
!! ATTCAAATAAATATTGTATG+TGG - chr4_3:20066783-20066802 None:intergenic 15.0%
!!! ATATGACTTGTATTAATTAT+TGG - chr4_3:20066946-20066965 None:intergenic 15.0%
!! TTATATAGAAAAAAAATGAG+AGG - chr4_3:20067237-20067256 None:intergenic 15.0%
!! TTATAATAAAGTGAATAAGT+GGG + chr4_3:20068031-20068050 Msa0633880:intron 15.0%
!! TAACATATATATAATACTCT+AGG + chr4_3:20068177-20068196 Msa0633880:intron 15.0%
!!! ATTTTACCAATTTTTAATAC+AGG - chr4_3:20068377-20068396 None:intergenic 15.0%
!! TAAAAATTGGTAAAATATAG+CGG + chr4_3:20068381-20068400 Msa0633880:intron 15.0%
!! ACTATAACTTATATGTTATT+AGG - chr4_3:20068577-20068596 None:intergenic 15.0%
!! TCAATGTTATGTTATTGTTA+TGG - chr4_3:20059432-20059451 None:intergenic 20.0%
!! AATCTCGTTTATATATTAGT+TGG + chr4_3:20059683-20059702 Msa0633880:intron 20.0%
!!! AGATTGTTGATGATTATTTT+TGG + chr4_3:20059906-20059925 Msa0633880:intron 20.0%
!!! TTTTTTTTTCTTTTTTGGGT+AGG + chr4_3:20059964-20059983 Msa0633880:intron 20.0%
!! AAAATTGATAAAGTATATGG+TGG + chr4_3:20060141-20060160 Msa0633880:intron 20.0%
!!! ATTTAAGGTTAAAGTGTTAA+CGG + chr4_3:20060193-20060212 Msa0633880:intron 20.0%
!!! TTGAGAAGTTTTTTTAGTTA+AGG + chr4_3:20060259-20060278 Msa0633880:intron 20.0%
!!! TGAGAAGTTTTTTTAGTTAA+GGG + chr4_3:20060260-20060279 Msa0633880:intron 20.0%
!!! ATTATGCCTAAAAATTTTGA+AGG + chr4_3:20060325-20060344 Msa0633880:intron 20.0%
!! TAATTTGACAGAAGATATAT+TGG + chr4_3:20060384-20060403 Msa0633880:intron 20.0%
!!! TCATTTTTAAGGATTTGATA+GGG - chr4_3:20060438-20060457 None:intergenic 20.0%
!!! TTCATTTTTAAGGATTTGAT+AGG - chr4_3:20060439-20060458 None:intergenic 20.0%
!! ATACCAATATTGCAATTAAT+CGG + chr4_3:20060470-20060489 Msa0633880:intron 20.0%
!! AAAATATATCAGGAAATAAC+GGG - chr4_3:20060555-20060574 None:intergenic 20.0%
!!! CTTTCATCCTTTTTTTTTTA+AGG + chr4_3:20060625-20060644 Msa0633880:intron 20.0%
!! CCATGAAAAAATTAAAGATA+CGG + chr4_3:20060999-20061018 Msa0633880:intron 20.0%
!!! TGAAATGAGTCAATTATTTT+AGG - chr4_3:20061098-20061117 None:intergenic 20.0%
!!! ATAAAGCTAGAGTTTTTTTA+GGG - chr4_3:20061709-20061728 None:intergenic 20.0%
!!! CAATTTTGAAAATAAATCCT+AGG - chr4_3:20061742-20061761 None:intergenic 20.0%
!!! AACACTTTATTGACTTTTAA+GGG - chr4_3:20061834-20061853 None:intergenic 20.0%
!!! AAACACTTTATTGACTTTTA+AGG - chr4_3:20061835-20061854 None:intergenic 20.0%
!! GGAAAATTTCATTAACTAAT+GGG - chr4_3:20061924-20061943 None:intergenic 20.0%
!! TGGAAAATTTCATTAACTAA+TGG - chr4_3:20061925-20061944 None:intergenic 20.0%
!!! TAGTTAATGAAATTTTCCAA+AGG + chr4_3:20061926-20061945 Msa0633880:intron 20.0%
!!! TTCAGTTTTTTCTTCATTTA+TGG - chr4_3:20062278-20062297 None:intergenic 20.0%
!!! ACTCTCTTTGTTTATAATAA+AGG + chr4_3:20062334-20062353 Msa0633880:intron 20.0%
!!! TTTATAATAAAGGTACCTTT+GGG + chr4_3:20062344-20062363 Msa0633880:intron 20.0%
!! CAGATTATGATATGAATTTA+TGG - chr4_3:20062795-20062814 None:intergenic 20.0%
!!! ATTGTTTTGGAATTAGAAAT+TGG + chr4_3:20062945-20062964 Msa0633880:intron 20.0%
!!! CTTTATTTCATCCTAAAATT+AGG - chr4_3:20063400-20063419 None:intergenic 20.0%
!!! ACATCAAATTTTTTGAAGAA+GGG + chr4_3:20063921-20063940 Msa0633880:intron 20.0%
!! CAAAAAAAATAAATAAGTGG+TGG + chr4_3:20064014-20064033 Msa0633880:intron 20.0%
!! TAGACACAAAAAATTAATGA+TGG - chr4_3:20064063-20064082 None:intergenic 20.0%
!! TATACAATATTATGATCCAA+AGG + chr4_3:20064500-20064519 Msa0633880:intron 20.0%
!!! ACGAACTATCATAAATTTTA+GGG - chr4_3:20065617-20065636 None:intergenic 20.0%
!!! TACGAACTATCATAAATTTT+AGG - chr4_3:20065618-20065637 None:intergenic 20.0%
!! AATATTGAAACCATAAAATC+GGG + chr4_3:20065637-20065656 Msa0633880:intron 20.0%
!!! TTATTATTTCTTCTACGATA+TGG + chr4_3:20065811-20065830 Msa0633880:intron 20.0%
!!! TATTATTTCTTCTACGATAT+GGG + chr4_3:20065812-20065831 Msa0633880:intron 20.0%
!!! CTTTAAAATTTACATTGAAC+CGG + chr4_3:20066400-20066419 Msa0633880:intron 20.0%
!! TTGTTTATAATAATGACTGA+AGG + chr4_3:20066821-20066840 Msa0633880:intron 20.0%
!! TGTTTATAATAATGACTGAA+GGG + chr4_3:20066822-20066841 Msa0633880:intron 20.0%
!! AGAAAATAATTTCATGTAGT+TGG - chr4_3:20067191-20067210 None:intergenic 20.0%
!! TTATTCACTTTATTATAAGG+TGG - chr4_3:20068029-20068048 None:intergenic 20.0%
!! CACTTATTCACTTTATTATA+AGG - chr4_3:20068032-20068051 None:intergenic 20.0%
!! CTTATAATAAAGTGAATAAG+TGG + chr4_3:20068030-20068049 Msa0633880:intron 20.0%
!! TATAATAAAGTGAATAAGTG+GGG + chr4_3:20068032-20068051 Msa0633880:intron 20.0%
!!! TGTTTTCCTGTATTAAAAAT+TGG + chr4_3:20068368-20068387 Msa0633880:intron 20.0%
!! ACATATAAGTTATAGTTGAT+AGG + chr4_3:20068581-20068600 Msa0633880:intron 20.0%
!! CAAAGAATATTCAAATTACA+GGG - chr4_3:20068691-20068710 None:intergenic 20.0%
!! TTAAATTCAAACCATGTAAT+CGG - chr4_3:20068855-20068874 None:intergenic 20.0%
!! CTTATAAAAGTAGAATAGTT+TGG + chr4_3:20068927-20068946 Msa0633880:intron 20.0%
!! AATTAATGACATATTGTGTT+AGG + chr4_3:20069035-20069054 Msa0633880:intron 20.0%
!! AGAATAAGAATGAAAATGAA+GGG + chr4_3:20069196-20069215 Msa0633880:CDS 20.0%
! GAAATATAACCTTGAAGAAA+AGG - chr4_3:20059147-20059166 None:intergenic 25.0%
!! TTAGTGAAAGTATACATACT+TGG - chr4_3:20059370-20059389 None:intergenic 25.0%
! TCGTTTATATATTAGTTGGT+AGG + chr4_3:20059687-20059706 Msa0633880:intron 25.0%
! AGGGAAAAATTAGATATTGA+TGG + chr4_3:20060041-20060060 Msa0633880:intron 25.0%
!! AATTAGATATTGATGGTTCA+CGG + chr4_3:20060048-20060067 Msa0633880:intron 25.0%
!!! TTTTTTAAAAAGAAGACCGT+TGG - chr4_3:20060098-20060117 None:intergenic 25.0%
!! ATATGGGCTAAAATTAAAAG+TGG - chr4_3:20060168-20060187 None:intergenic 25.0%
! TAGCCCATATTAGATATTTA+AGG + chr4_3:20060178-20060197 Msa0633880:intron 25.0%
! TTTCTTGCCTTTATATGTTA+TGG - chr4_3:20060225-20060244 None:intergenic 25.0%
! ACTAAAAAAACTTCTCAAAG+TGG - chr4_3:20060257-20060276 None:intergenic 25.0%
!! TTCATGCCTTCAAAATTTTT+AGG - chr4_3:20060334-20060353 None:intergenic 25.0%
! TATCCGATTAATTGCAATAT+TGG - chr4_3:20060476-20060495 None:intergenic 25.0%
! TCATTGATAAATACAATGAG+GGG - chr4_3:20060800-20060819 None:intergenic 25.0%
! CTCATTGATAAATACAATGA+GGG - chr4_3:20060801-20060820 None:intergenic 25.0%
! TCTCATTGATAAATACAATG+AGG - chr4_3:20060802-20060821 None:intergenic 25.0%
!! TGCTCAAAAGTTTTTCATTT+GGG + chr4_3:20060969-20060988 Msa0633880:intron 25.0%
!!! CCGTATCTTTAATTTTTTCA+TGG - chr4_3:20061002-20061021 None:intergenic 25.0%
! AAATACACTAATACTTGACA+AGG + chr4_3:20061361-20061380 Msa0633880:intron 25.0%
! AAGAAAAATGTACTAGTGAA+GGG - chr4_3:20061410-20061429 None:intergenic 25.0%
! TAAGAAAAATGTACTAGTGA+AGG - chr4_3:20061411-20061430 None:intergenic 25.0%
! AAAACTCACTTAAATTGAGA+CGG + chr4_3:20061452-20061471 Msa0633880:intron 25.0%
! AATTCAAAGACAGTCTTTAT+TGG + chr4_3:20061530-20061549 Msa0633880:intron 25.0%
! ATTCAAAGACAGTCTTTATT+GGG + chr4_3:20061531-20061550 Msa0633880:intron 25.0%
! AATGTTAACTAATACTTCTG+AGG - chr4_3:20061609-20061628 None:intergenic 25.0%
!! TTTAAGATTGAGTCACTATT+TGG + chr4_3:20061636-20061655 Msa0633880:intron 25.0%
!!! TAAAGCTAGAGTTTTTTTAG+GGG - chr4_3:20061708-20061727 None:intergenic 25.0%
!!! GATAAAGCTAGAGTTTTTTT+AGG - chr4_3:20061710-20061729 None:intergenic 25.0%
! GGTTATATTTACAGAATCAA+GGG + chr4_3:20061982-20062001 Msa0633880:intron 25.0%
! CTGAAAATAAATTCCAATGA+AGG + chr4_3:20062293-20062312 Msa0633880:intron 25.0%
!!! GTTTATAATAAAGGTACCTT+TGG + chr4_3:20062343-20062362 Msa0633880:intron 25.0%
! TAAAAATTAACAAATGGCTG+AGG - chr4_3:20062620-20062639 None:intergenic 25.0%
! ATTTCAACTGTTGAAATGAA+GGG - chr4_3:20062659-20062678 None:intergenic 25.0%
! ATGATATGAATTTATGGTGT+TGG - chr4_3:20062789-20062808 None:intergenic 25.0%
!! TTCATATCATAATCTGAGAT+TGG + chr4_3:20062799-20062818 Msa0633880:intron 25.0%
!!! TTGTTGTTTTGAAATAGTTC+TGG + chr4_3:20062877-20062896 Msa0633880:intron 25.0%
!!! AGATCTCTGAAATTTATGAA+TGG - chr4_3:20063096-20063115 None:intergenic 25.0%
!! ACTCTTTGTTTCATATTCTT+GGG - chr4_3:20063676-20063695 None:intergenic 25.0%
!! TACTCTTTGTTTCATATTCT+TGG - chr4_3:20063677-20063696 None:intergenic 25.0%
! AATATGAAACAAAGAGTAGT+GGG + chr4_3:20063679-20063698 Msa0633880:intron 25.0%
! CGTTTAATGATGTATGTATA+AGG - chr4_3:20063870-20063889 None:intergenic 25.0%
!!! CACATCAAATTTTTTGAAGA+AGG + chr4_3:20063920-20063939 Msa0633880:intron 25.0%
!!! CATCAAATTTTTTGAAGAAG+GGG + chr4_3:20063922-20063941 Msa0633880:intron 25.0%
! CACAAAAAATTAATGATGGT+GGG - chr4_3:20064059-20064078 None:intergenic 25.0%
! ACACAAAAAATTAATGATGG+TGG - chr4_3:20064060-20064079 None:intergenic 25.0%
! CAAATGGAACAAATTACAAA+TGG + chr4_3:20064101-20064120 Msa0633880:intron 25.0%
! GGATCATAATATTGTATATG+AGG - chr4_3:20064498-20064517 None:intergenic 25.0%
! ACTAGATGTCTATATAAGTT+TGG + chr4_3:20064534-20064553 Msa0633880:intron 25.0%
! ATATTATGTAATTGTGTGCA+TGG - chr4_3:20064573-20064592 None:intergenic 25.0%
! ACGAATATCTTGTATAGAAA+AGG - chr4_3:20064725-20064744 None:intergenic 25.0%
!!! GAATGATATTGATTCTTTGA+AGG - chr4_3:20065002-20065021 None:intergenic 25.0%
! AGAGAATTTCAAAACAATTC+AGG - chr4_3:20065103-20065122 None:intergenic 25.0%
!! TCGTAGAAGTTTATTGTTTT+TGG + chr4_3:20065157-20065176 Msa0633880:intron 25.0%
!! TTCTTTTTCTGTCAATTAGA+GGG + chr4_3:20065505-20065524 Msa0633880:intron 25.0%
! TAGAACTAAAAATTTCCTTG+AGG - chr4_3:20065532-20065551 None:intergenic 25.0%
! GGGATTGTTTATAAAGAAAT+TGG + chr4_3:20065832-20065851 Msa0633880:intron 25.0%
!!! TCTAGTTCTTGAATTGAATA+AGG - chr4_3:20065886-20065905 None:intergenic 25.0%
!!! TTGAGCTCTTTTGTTTATTT+GGG - chr4_3:20066125-20066144 None:intergenic 25.0%
! AGGGTTAATTATTACACATT+AGG - chr4_3:20066284-20066303 None:intergenic 25.0%
! AATGTAATTAACCCTAGTAT+AGG + chr4_3:20066315-20066334 Msa0633880:intron 25.0%
!! ATGCAAAGTTTTCAAAGATA+AGG + chr4_3:20066622-20066641 Msa0633880:intron 25.0%
!! TGCAAAGTTTTCAAAGATAA+GGG + chr4_3:20066623-20066642 Msa0633880:intron 25.0%
! TAAATGCTATATGCTATGTA+TGG - chr4_3:20066687-20066706 None:intergenic 25.0%
! TATAGAAAAAAAATGAGAGG+AGG - chr4_3:20067234-20067253 None:intergenic 25.0%
! TTCTATATAAACCCATACAT+TGG + chr4_3:20067247-20067266 Msa0633880:intron 25.0%
! TCTATATAAACCCATACATT+GGG + chr4_3:20067248-20067267 Msa0633880:intron 25.0%
! TCTATTGTGTAGAGAAAAAA+TGG + chr4_3:20067337-20067356 Msa0633880:intron 25.0%
! ACAACTTGACTAAAAAACAA+AGG - chr4_3:20067991-20068010 None:intergenic 25.0%
!! AACCTAGAGTATTATATACA+GGG - chr4_3:20068080-20068099 None:intergenic 25.0%
!! AAACCTAGAGTATTATATAC+AGG - chr4_3:20068081-20068100 None:intergenic 25.0%
!!! TAGGTTTTAAATAAGAGTGA+AGG + chr4_3:20068094-20068113 Msa0633880:intron 25.0%
!!! TAGGTTTTAAATAAGAGTGA+AGG + chr4_3:20068094-20068113 Msa0633880:intron 25.0%
!!! ATAAGTGTCTTCTTTTTCAT+TGG + chr4_3:20068344-20068363 Msa0633880:intron 25.0%
! TAACTTATATGTTATTAGGC+CGG - chr4_3:20068573-20068592 None:intergenic 25.0%
!!! TATAAGTTATAGTTGATAGG+CGG + chr4_3:20068584-20068603 Msa0633880:intron 25.0%
! TGTTTATCCTGTAATATTAG+CGG + chr4_3:20068622-20068641 Msa0633880:intron 25.0%
! CCAAAGAATATTCAAATTAC+AGG - chr4_3:20068692-20068711 None:intergenic 25.0%
! CCTGTAATTTGAATATTCTT+TGG + chr4_3:20068689-20068708 Msa0633880:intron 25.0%
!! TTTGAAATTTGATGTCATGA+AGG - chr4_3:20068722-20068741 None:intergenic 25.0%
! TGTAAGGTCAAAATTCATAA+AGG + chr4_3:20068810-20068829 Msa0633880:intron 25.0%
!! AAAATGAAAAAGTGCAAAGA+GGG - chr4_3:20068986-20069005 None:intergenic 25.0%
!! AAAAATGAAAAAGTGCAAAG+AGG - chr4_3:20068987-20069006 None:intergenic 25.0%
! GAGAATAAGAATGAAAATGA+AGG + chr4_3:20069195-20069214 Msa0633880:CDS 25.0%
! GAATAAGAATGAAAATGAAG+GGG + chr4_3:20069197-20069216 Msa0633880:CDS 25.0%
! TTCTTTAAAGACTTTGAGTG+TGG + chr4_3:20059272-20059291 Msa0633880:CDS 30.0%
AATACCACATAAGGCAAATA+GGG - chr4_3:20059310-20059329 None:intergenic 30.0%
!!! TTTTGAAGTAGTAACACTCT+TGG + chr4_3:20059404-20059423 Msa0633880:intron 30.0%
! TTTGAAGTAGTAACACTCTT+GGG + chr4_3:20059405-20059424 Msa0633880:intron 30.0%
GATGAAGACTAACAACTAAT+AGG - chr4_3:20059455-20059474 None:intergenic 30.0%
TAATATAACATGCAGCACAA+CGG - chr4_3:20059856-20059875 None:intergenic 30.0%
!! TATTTTGGGTATGAAGTTGA+AGG + chr4_3:20059880-20059899 Msa0633880:intron 30.0%
AGTAAGAAGATGAAGAAAAG+AGG + chr4_3:20060021-20060040 Msa0633880:intron 30.0%
GTAAGAAGATGAAGAAAAGA+GGG + chr4_3:20060022-20060041 Msa0633880:intron 30.0%
CATATAAAGGCAAGAAACTT+AGG + chr4_3:20060228-20060247 Msa0633880:intron 30.0%
GTCAAGGAGTCATATATTTA+GGG - chr4_3:20060675-20060694 None:intergenic 30.0%
AGTCAAGGAGTCATATATTT+AGG - chr4_3:20060676-20060695 None:intergenic 30.0%
TATATGACTCCTTGACTAAA+TGG + chr4_3:20060679-20060698 Msa0633880:intron 30.0%
!!! CAATGAGAGAAACTTTTTCA+TGG + chr4_3:20060814-20060833 Msa0633880:intron 30.0%
! GTGCTCAAAAGTTTTTCATT+TGG + chr4_3:20060968-20060987 Msa0633880:intron 30.0%
! GCTCAAAAGTTTTTCATTTG+GGG + chr4_3:20060970-20060989 Msa0633880:intron 30.0%
ACAAGAGACTCACTTATTAA+GGG - chr4_3:20061063-20061082 None:intergenic 30.0%
TACAAGAGACTCACTTATTA+AGG - chr4_3:20061064-20061083 None:intergenic 30.0%
AGAAAAATGTACTAGTGAAG+GGG - chr4_3:20061409-20061428 None:intergenic 30.0%
!! GCTTTATCGTTTTTATTCCT+AGG + chr4_3:20061722-20061741 Msa0633880:intron 30.0%
!!! CTTTATTGACTTTTAAGGGA+TGG - chr4_3:20061830-20061849 None:intergenic 30.0%
CGGTTATATTTACAGAATCA+AGG + chr4_3:20061981-20062000 Msa0633880:intron 30.0%
! CAATAAAGCACTCTATATAG+TGG - chr4_3:20062049-20062068 None:intergenic 30.0%
CATAACACTTAAACCTTCAT+TGG - chr4_3:20062309-20062328 None:intergenic 30.0%
CAATGAAGGTTTAAGTGTTA+TGG + chr4_3:20062307-20062326 Msa0633880:intron 30.0%
GAATCTGAAAAGAATTGAAC+TGG - chr4_3:20062582-20062601 None:intergenic 30.0%
GATTTCAACTGTTGAAATGA+AGG - chr4_3:20062660-20062679 None:intergenic 30.0%
!! ATTTATGGTGTTGGTGTTAT+TGG - chr4_3:20062780-20062799 None:intergenic 30.0%
! ATCTGAGATTGGAATAGAAA+AGG + chr4_3:20062810-20062829 Msa0633880:intron 30.0%
AATAGAAAAGGTGAAAGCTA+TGG + chr4_3:20062822-20062841 Msa0633880:intron 30.0%
TTGGAATTAGAAATTGGCAT+TGG + chr4_3:20062951-20062970 Msa0633880:intron 30.0%
AACATTGTCAGAATTTCATG+AGG - chr4_3:20062991-20063010 None:intergenic 30.0%
! ACCAAAATAGCCCTAATTTT+AGG + chr4_3:20063386-20063405 Msa0633880:intron 30.0%
! TCCTAAAATTAGGGCTATTT+TGG - chr4_3:20063390-20063409 None:intergenic 30.0%
TTAGGATGAAATAAAGTGTG+TGG + chr4_3:20063404-20063423 Msa0633880:intron 30.0%
TAGGATGAAATAAAGTGTGT+GGG + chr4_3:20063405-20063424 Msa0633880:intron 30.0%
! TCTTTGTTTCATATTCTTGG+GGG - chr4_3:20063674-20063693 None:intergenic 30.0%
! CTCTTTGTTTCATATTCTTG+GGG - chr4_3:20063675-20063694 None:intergenic 30.0%
GAATATGAAACAAAGAGTAG+TGG + chr4_3:20063678-20063697 Msa0633880:intron 30.0%
CAAATGACAAAGAAAGAAAG+TGG + chr4_3:20063713-20063732 Msa0633880:intron 30.0%
TCTATGATAGATCCAATCAA+CGG + chr4_3:20063778-20063797 Msa0633880:intron 30.0%
GGAACAAATTACAAATGAAG+AGG - chr4_3:20063967-20063986 None:intergenic 30.0%
! TTGTTCCATTTGTTGCAATT+TGG + chr4_3:20063980-20063999 Msa0633880:intron 30.0%
TCTCTCTAAATTGCAACAAA+TGG + chr4_3:20064085-20064104 Msa0633880:intron 30.0%
!!! AGTTAGAGTTTTTGAAGTAG+GGG - chr4_3:20064177-20064196 None:intergenic 30.0%
!!! CAGTTAGAGTTTTTGAAGTA+GGG - chr4_3:20064178-20064197 None:intergenic 30.0%
CTAGTATCAATAATGACCTT+TGG - chr4_3:20064519-20064538 None:intergenic 30.0%
! TTCAGAATTTGCTTGAGATA+GGG - chr4_3:20064620-20064639 None:intergenic 30.0%
AATAGAGCTTAAGGATGTTT+CGG - chr4_3:20064764-20064783 None:intergenic 30.0%
ATGTCGAATAATAGAGCTTA+AGG - chr4_3:20064773-20064792 None:intergenic 30.0%
GCTCTATTATTCGACATATT+AGG + chr4_3:20064776-20064795 Msa0633880:intron 30.0%
TGAAGATATTCTCTTACGTA+GGG - chr4_3:20064834-20064853 None:intergenic 30.0%
ATGAAGATATTCTCTTACGT+AGG - chr4_3:20064835-20064854 None:intergenic 30.0%
ATGTTCATCATTGTCATGTA+AGG + chr4_3:20064859-20064878 Msa0633880:intron 30.0%
! AAATAAACCAAGTCTGAAGT+TGG - chr4_3:20065071-20065090 None:intergenic 30.0%
!! AGATATTGTTTGTTTCTACG+AGG + chr4_3:20065182-20065201 Msa0633880:intron 30.0%
!!! CCTTTTTCAAGTAGAATAAG+TGG - chr4_3:20065225-20065244 None:intergenic 30.0%
CCACTTATTCTACTTGAAAA+AGG + chr4_3:20065222-20065241 Msa0633880:intron 30.0%
! CTTCTTTTTCTGTCAATTAG+AGG + chr4_3:20065504-20065523 Msa0633880:intron 30.0%
AGAACACAAGAATGTAAAAG+AGG - chr4_3:20065666-20065685 None:intergenic 30.0%
TCAAAGTAGGTGATGTTAAA+AGG - chr4_3:20065770-20065789 None:intergenic 30.0%
! GTTGATGTTATGCATTTTGA+GGG - chr4_3:20065929-20065948 None:intergenic 30.0%
!! GTTGAGCTCTTTTGTTTATT+TGG - chr4_3:20066126-20066145 None:intergenic 30.0%
TTCGTCTAAATTCTCATATG+TGG - chr4_3:20066151-20066170 None:intergenic 30.0%
TTACACATTAGGTATAACCT+AGG - chr4_3:20066273-20066292 None:intergenic 30.0%
AAAATCCATTGCCTATACTA+GGG - chr4_3:20066329-20066348 None:intergenic 30.0%
AAAAATCCATTGCCTATACT+AGG - chr4_3:20066330-20066349 None:intergenic 30.0%
TGGCTATATATAAATGATGC+CGG - chr4_3:20066422-20066441 None:intergenic 30.0%
TCATTTATATATAGCCACGA+CGG + chr4_3:20066425-20066444 Msa0633880:intron 30.0%
! ATCCAATGTTTGATTTAGTG+TGG - chr4_3:20066599-20066618 None:intergenic 30.0%
CATAACACAATTACATTGTC+TGG + chr4_3:20066708-20066727 Msa0633880:intron 30.0%
AGAGTTGGATTCAAATCAAA+CGG - chr4_3:20067133-20067152 None:intergenic 30.0%
! TTTCTATTTCTTCACACCTT+AGG + chr4_3:20067206-20067225 Msa0633880:intron 30.0%
! TTCTATTTCTTCACACCTTA+GGG + chr4_3:20067207-20067226 Msa0633880:intron 30.0%
CTATATAAACCCATACATTG+GGG + chr4_3:20067249-20067268 Msa0633880:intron 30.0%
!!! TTGTTGCTTTTCTTTGTGAT+AGG - chr4_3:20067279-20067298 None:intergenic 30.0%
! TAGTGTTAAAGTATCATGCA+TGG + chr4_3:20067361-20067380 Msa0633880:intron 30.0%
! GCTTCTAGCTATAATATTTC+TGG + chr4_3:20067608-20067627 Msa0633880:CDS 30.0%
!! TAGCTATAATATTTCTGGTG+AGG + chr4_3:20067613-20067632 Msa0633880:CDS 30.0%
!! TATAATATTTCTGGTGAGGA+AGG + chr4_3:20067617-20067636 Msa0633880:CDS 30.0%
!! ATAATATTTCTGGTGAGGAA+GGG + chr4_3:20067618-20067637 Msa0633880:CDS 30.0%
GAAACTGTATCATATAGTGA+TGG + chr4_3:20067734-20067753 Msa0633880:intron 30.0%
AAAGATCGAAAATGTAACAC+TGG + chr4_3:20067761-20067780 Msa0633880:intron 30.0%
!! TTTTTAGTCAAGTTGTCTAG+TGG + chr4_3:20067995-20068014 Msa0633880:intron 30.0%
! ACCTAGAGTATTATATACAG+GGG - chr4_3:20068079-20068098 None:intergenic 30.0%
! TTTTACACTTGTATACGTTG+AGG - chr4_3:20068246-20068265 None:intergenic 30.0%
!! TAGTAAGTCTTAACTTGCAT+TGG - chr4_3:20068273-20068292 None:intergenic 30.0%
!! TGGTAAAATATAGCGGATAT+TGG + chr4_3:20068388-20068407 Msa0633880:intron 30.0%
ACTTACCGTTGAAAATTACT+GGG - chr4_3:20068424-20068443 None:intergenic 30.0%
!! TTAAAGTCCTCGTTTTAAGT+CGG - chr4_3:20068534-20068553 None:intergenic 30.0%
TAATAACCTTACTCATTGAC+CGG + chr4_3:20068551-20068570 Msa0633880:intron 30.0%
TTTCTGATTTACCTTCATGT+AGG + chr4_3:20068645-20068664 Msa0633880:intron 30.0%
AAACAAGATTTCCTACATGA+AGG - chr4_3:20068659-20068678 None:intergenic 30.0%
AAATTCGTTCCAATAACATG+GGG - chr4_3:20068761-20068780 None:intergenic 30.0%
GAAATTCGTTCCAATAACAT+GGG - chr4_3:20068762-20068781 None:intergenic 30.0%
CATGTTATTGGAACGAATTT+CGG + chr4_3:20068761-20068780 Msa0633880:intron 30.0%
!!! GTCAGATCATTGATTTTGTA+AGG + chr4_3:20068794-20068813 Msa0633880:intron 30.0%
CATGTAATCGGAAGATTATT+TGG - chr4_3:20068843-20068862 None:intergenic 30.0%
CAAATAATCTTCCGATTACA+TGG + chr4_3:20068841-20068860 Msa0633880:intron 30.0%
AGAAACTGCTAATATTACAG+CGG + chr4_3:20068900-20068919 Msa0633880:intron 30.0%
AATCTATCAGCTTCTGCAAT+AGG - chr4_3:20059090-20059109 None:intergenic 35.0%
TCACTGCTTCACAACAATAT+GGG - chr4_3:20059179-20059198 None:intergenic 35.0%
TTCACTGCTTCACAACAATA+TGG - chr4_3:20059180-20059199 None:intergenic 35.0%
GAATACCACATAAGGCAAAT+AGG - chr4_3:20059311-20059330 None:intergenic 35.0%
! ACTTGTGCTGTATGAGATTT+TGG + chr4_3:20059786-20059805 Msa0633880:intron 35.0%
! TGTATGAGATTTTGGACCAA+GGG + chr4_3:20059794-20059813 Msa0633880:intron 35.0%
AATATAACATGCAGCACAAC+GGG - chr4_3:20059855-20059874 None:intergenic 35.0%
GAGAGGACCATAACATATAA+AGG + chr4_3:20060215-20060234 Msa0633880:intron 35.0%
AAATTCCCACCATTTAGTCA+AGG - chr4_3:20060691-20060710 None:intergenic 35.0%
GTGGGAATTTAGAAAGTTGT+TGG + chr4_3:20060701-20060720 Msa0633880:intron 35.0%
!! CAAGAGTATTTACAAGGAGA+AGG - chr4_3:20061201-20061220 None:intergenic 35.0%
TCCTTGTAAATACTCTTGAG+TGG + chr4_3:20061203-20061222 Msa0633880:intron 35.0%
!! ACCACTCAAGAGTATTTACA+AGG - chr4_3:20061207-20061226 None:intergenic 35.0%
AAAGACAGTCTTTATTGGGA+CGG + chr4_3:20061535-20061554 Msa0633880:intron 35.0%
TATTTACAGAATCAAGGGTG+TGG + chr4_3:20061987-20062006 Msa0633880:intron 35.0%
TGCTGCTATAATGAAAGTGA+TGG + chr4_3:20062067-20062086 Msa0633880:intron 35.0%
TGCTATAATGAAAGTGATGG+AGG + chr4_3:20062070-20062089 Msa0633880:intron 35.0%
TGAAGGTTTAAGTGTTATGG+AGG + chr4_3:20062310-20062329 Msa0633880:intron 35.0%
!! ACCTTTGGGTAAAAGTGTTA+TGG + chr4_3:20062358-20062377 Msa0633880:intron 35.0%
! TCCATAACACTTTTACCCAA+AGG - chr4_3:20062362-20062381 None:intergenic 35.0%
!! TTTGGGTAAAAGTGTTATGG+AGG + chr4_3:20062361-20062380 Msa0633880:intron 35.0%
AAAGGTGAAAGCTATGGAAT+TGG + chr4_3:20062828-20062847 Msa0633880:intron 35.0%
AAATTTCAGAGATCTCGAAC+AGG + chr4_3:20063101-20063120 Msa0633880:intron 35.0%
!!! GGAAACTTTTTTCCCATCAT+GGG - chr4_3:20063630-20063649 None:intergenic 35.0%
!!! AGGAAACTTTTTTCCCATCA+TGG - chr4_3:20063631-20063650 None:intergenic 35.0%
TTTGTTTCATATTCTTGGGG+GGG - chr4_3:20063672-20063691 None:intergenic 35.0%
! CTTTGTTTCATATTCTTGGG+GGG - chr4_3:20063673-20063692 None:intergenic 35.0%
TCTCTCCAAATTGCAACAAA+TGG - chr4_3:20063988-20064007 None:intergenic 35.0%
TCGTTGTCATATTGAAACGA+GGG - chr4_3:20064139-20064158 None:intergenic 35.0%
ATCGTTGTCATATTGAAACG+AGG - chr4_3:20064140-20064159 None:intergenic 35.0%
!!! GCAGTTAGAGTTTTTGAAGT+AGG - chr4_3:20064179-20064198 None:intergenic 35.0%
AAAAACTCTAACTGCAACCT+TGG + chr4_3:20064184-20064203 Msa0633880:intron 35.0%
ATGACATAAGGAGCTTGTAA+CGG - chr4_3:20064291-20064310 None:intergenic 35.0%
ATTTAACCGTCAAAATCCAG+AGG - chr4_3:20064349-20064368 None:intergenic 35.0%
!! GGATTTTGACGGTTAAATAG+TGG + chr4_3:20064351-20064370 Msa0633880:intron 35.0%
!! TTAAGTTGGTAGTCGTTGTA+AGG - chr4_3:20064388-20064407 None:intergenic 35.0%
! TATGTGAGCATCTTTAAGAG+GGG - chr4_3:20064430-20064449 None:intergenic 35.0%
! CTATGTGAGCATCTTTAAGA+GGG - chr4_3:20064431-20064450 None:intergenic 35.0%
TCTATGTGAGCATCTTTAAG+AGG - chr4_3:20064432-20064451 None:intergenic 35.0%
ATTGTATATGAGGTCGTTGA+TGG - chr4_3:20064488-20064507 None:intergenic 35.0%
TTATGTAATTGTGTGCATGG+CGG - chr4_3:20064570-20064589 None:intergenic 35.0%
!! AGGGAAAAGTATTCAAAGTG+TGG - chr4_3:20064601-20064620 None:intergenic 35.0%
! GTTCAGAATTTGCTTGAGAT+AGG - chr4_3:20064621-20064640 None:intergenic 35.0%
TCTCAAGCAAATTCTGAACT+TGG + chr4_3:20064622-20064641 Msa0633880:intron 35.0%
!! TTCGATGAGTTTTCTAGTGA+CGG - chr4_3:20064696-20064715 None:intergenic 35.0%
GTTCTCCTTACTACTAACAT+TGG + chr4_3:20064805-20064824 Msa0633880:intron 35.0%
TAAGGACAATGAGTTGTGAA+GGG + chr4_3:20064877-20064896 Msa0633880:intron 35.0%
!! TTGGTAGCTTTTGACAAAGA+GGG - chr4_3:20065052-20065071 None:intergenic 35.0%
! TGCCTTTTCAGACAAGTTAT+TGG + chr4_3:20065128-20065147 Msa0633880:intron 35.0%
! CACCAATAACTTGTCTGAAA+AGG - chr4_3:20065133-20065152 None:intergenic 35.0%
! CTCACACGTCAATGTAATTT+TGG - chr4_3:20065585-20065604 None:intergenic 35.0%
!! GGTTGATGTTATGCATTTTG+AGG - chr4_3:20065930-20065949 None:intergenic 35.0%
TGTTCTGTTGTATACTCTTG+AGG - chr4_3:20066063-20066082 None:intergenic 35.0%
GTCTAAATTCTCATATGTGG+TGG - chr4_3:20066148-20066167 None:intergenic 35.0%
TTTAAGTAACGCTATGTGAG+GGG - chr4_3:20066188-20066207 None:intergenic 35.0%
CTTTAAGTAACGCTATGTGA+GGG - chr4_3:20066189-20066208 None:intergenic 35.0%
ACTTTAAGTAACGCTATGTG+AGG - chr4_3:20066190-20066209 None:intergenic 35.0%
ACTTCTGATCAATAACTCCT+AGG + chr4_3:20066253-20066272 Msa0633880:intron 35.0%
ATTAACCCTAGTATAGGCAA+TGG + chr4_3:20066321-20066340 Msa0633880:intron 35.0%
AGTTTCAATCTTTCCGTCTT+CGG + chr4_3:20066358-20066377 Msa0633880:intron 35.0%
AGAAACGCTAAAATCATGTG+TGG + chr4_3:20066491-20066510 Msa0633880:intron 35.0%
GAAACGCTAAAATCATGTGT+GGG + chr4_3:20066492-20066511 Msa0633880:intron 35.0%
GACCACACTAAATCAAACAT+TGG + chr4_3:20066594-20066613 Msa0633880:intron 35.0%
!! ATGCTTTTGAAGAATGCATG+TGG - chr4_3:20066884-20066903 None:intergenic 35.0%
TATTGGATATTCCAACCGTA+GGG - chr4_3:20066929-20066948 None:intergenic 35.0%
TTATTGGATATTCCAACCGT+AGG - chr4_3:20066930-20066949 None:intergenic 35.0%
ACATTTGTAGTCGTTAGACT+TGG + chr4_3:20067034-20067053 Msa0633880:intron 35.0%
CATTTGTAGTCGTTAGACTT+GGG + chr4_3:20067035-20067054 Msa0633880:intron 35.0%
! TAAAGTATCATGCATGGTTG+TGG + chr4_3:20067367-20067386 Msa0633880:intron 35.0%
AGAAGACTTAGAACCATGTT+TGG + chr4_3:20067463-20067482 Msa0633880:CDS 35.0%
GAAGACTTAGAACCATGTTT+GGG + chr4_3:20067464-20067483 Msa0633880:CDS 35.0%
! AGAGTATTATATACAGGGGT+CGG - chr4_3:20068075-20068094 None:intergenic 35.0%
ACCCCTGTATATAATACTCT+AGG + chr4_3:20068075-20068094 Msa0633880:intron 35.0%
! AACAGCCCAGTAATTTTCAA+CGG + chr4_3:20068416-20068435 Msa0633880:intron 35.0%
CACTTACCGTTGAAAATTAC+TGG - chr4_3:20068425-20068444 None:intergenic 35.0%
TCAGAAACCGCTAATATTAC+AGG - chr4_3:20068632-20068651 None:intergenic 35.0%
CGAAATTCGTTCCAATAACA+TGG - chr4_3:20068763-20068782 None:intergenic 35.0%
GCTGTAATATTAGCAGTTTC+TGG - chr4_3:20068901-20068920 None:intergenic 35.0%
AGGGTTTATAAAAGGAGTAG+CGG - chr4_3:20068967-20068986 None:intergenic 35.0%
GTGCAAAGAGGGTTTATAAA+AGG - chr4_3:20068975-20068994 None:intergenic 35.0%
! GTCACTTTACAGCATCAATT+AGG + chr4_3:20069115-20069134 Msa0633880:intron 35.0%
AAAACAATAGGCAGGGATGA+AGG + chr4_3:20059023-20059042 Msa0633880:five_prime_UTR 40.0%
CCTTGAAGAAAAGGATAGCA+TGG - chr4_3:20059138-20059157 None:intergenic 40.0%
! CCATGCTATCCTTTTCTTCA+AGG + chr4_3:20059135-20059154 Msa0633880:intron 40.0%
TAGACGATCATCATAGTCGA+TGG - chr4_3:20059220-20059239 None:intergenic 40.0%
TTGTGACTGCTTGAGAGATA+TGG + chr4_3:20059245-20059264 Msa0633880:CDS 40.0%
AAGACTTTGAGTGTGGAGAA+TGG + chr4_3:20059279-20059298 Msa0633880:CDS 40.0%
GGGTGTTTGAATACCACATA+AGG - chr4_3:20059319-20059338 None:intergenic 40.0%
ATATCGCGAGTAATCTGGTA+GGG - chr4_3:20059339-20059358 None:intergenic 40.0%
! AGTTGATATCGCGAGTAATC+TGG - chr4_3:20059344-20059363 None:intergenic 40.0%
! CTGTATGAGATTTTGGACCA+AGG + chr4_3:20059793-20059812 Msa0633880:intron 40.0%
AATAGAGTTGCACGATCCAA+CGG + chr4_3:20060079-20060098 Msa0633880:intron 40.0%
! AGGTTAAAGTGTTAACGGAG+AGG + chr4_3:20060198-20060217 Msa0633880:intron 40.0%
ATGACTCCTTGACTAAATGG+TGG + chr4_3:20060682-20060701 Msa0633880:intron 40.0%
TGACTCCTTGACTAAATGGT+GGG + chr4_3:20060683-20060702 Msa0633880:intron 40.0%
TTGAGCACACTCACATCAAA+TGG - chr4_3:20060956-20060975 None:intergenic 40.0%
ACTCACTTATTAAGGGACGA+AGG - chr4_3:20061056-20061075 None:intergenic 40.0%
!! TACAAGGAGAAGGTGCTAAA+AGG - chr4_3:20061191-20061210 None:intergenic 40.0%
TAGTGAAGGGGAGAGAAAAA+TGG - chr4_3:20061397-20061416 None:intergenic 40.0%
ACTCACTTAAATTGAGACGG+AGG + chr4_3:20061455-20061474 Msa0633880:intron 40.0%
CTCACTTAAATTGAGACGGA+GGG + chr4_3:20061456-20061475 Msa0633880:intron 40.0%
!! AACTAATACTTCTGAGGCAC+TGG - chr4_3:20061603-20061622 None:intergenic 40.0%
TATGGAGGAACTCTCAAAGA+CGG + chr4_3:20062376-20062395 Msa0633880:intron 40.0%
AAATTAAACGCCACCTCTTG+GGG - chr4_3:20062423-20062442 None:intergenic 40.0%
CAAATTAAACGCCACCTCTT+GGG - chr4_3:20062424-20062443 None:intergenic 40.0%
! CAAGAGGTGGCGTTTAATTT+GGG + chr4_3:20062423-20062442 Msa0633880:intron 40.0%
AAAGAATTGAACTGGTGCAG+AGG - chr4_3:20062574-20062593 None:intergenic 40.0%
TCAACTGTTGAAATGAAGGG+TGG - chr4_3:20062656-20062675 None:intergenic 40.0%
AGAAGAAGGAGGAACAACAA+TGG - chr4_3:20063020-20063039 None:intergenic 40.0%
TTGTTTCCAGCATCAGAAGA+AGG - chr4_3:20063034-20063053 None:intergenic 40.0%
AGAGAGAGAGAATGAGATGA+GGG + chr4_3:20063200-20063219 Msa0633880:intron 40.0%
! GGGATGAAAGAAAGTGTGTT+GGG + chr4_3:20063352-20063371 Msa0633880:intron 40.0%
! GGATGAAAGAAAGTGTGTTG+GGG + chr4_3:20063353-20063372 Msa0633880:intron 40.0%
TCTGTCAACAAGTTGCAAAG+AGG + chr4_3:20063538-20063557 Msa0633880:intron 40.0%
ACAAGTTGCAAAGAGGTAAC+AGG + chr4_3:20063545-20063564 Msa0633880:intron 40.0%
AAACACTCACTTTCCCATGA+TGG + chr4_3:20063614-20063633 Msa0633880:intron 40.0%
AACACTCACTTTCCCATGAT+GGG + chr4_3:20063615-20063634 Msa0633880:intron 40.0%
GTGAGATTAGAACCGTTGAT+TGG - chr4_3:20063793-20063812 None:intergenic 40.0%
! ACGGTTCTAATCTCACAAGA+AGG + chr4_3:20063797-20063816 Msa0633880:intron 40.0%
TCCTCAATCCACGTAATTGT+GGG + chr4_3:20063894-20063913 Msa0633880:intron 40.0%
TGACATAAGGAGCTTGTAAC+GGG - chr4_3:20064290-20064309 None:intergenic 40.0%
! GTCGTTGTAAGGCTTTTGAA+GGG - chr4_3:20064377-20064396 None:intergenic 40.0%
! AGTCGTTGTAAGGCTTTTGA+AGG - chr4_3:20064378-20064397 None:intergenic 40.0%
CCTGTTTGTGAGTGTTAAGT+TGG - chr4_3:20064402-20064421 None:intergenic 40.0%
CCAACTTAACACTCACAAAC+AGG + chr4_3:20064399-20064418 Msa0633880:intron 40.0%
TATGTAATTGTGTGCATGGC+GGG - chr4_3:20064569-20064588 None:intergenic 40.0%
! GAAACGTGTGTCTGTTTTGT+TGG + chr4_3:20064649-20064668 Msa0633880:intron 40.0%
GTAAGGACAATGAGTTGTGA+AGG + chr4_3:20064876-20064895 Msa0633880:intron 40.0%
GCTCAAATAGTGCATGTTGT+GGG - chr4_3:20064944-20064963 None:intergenic 40.0%
TGCTCAAATAGTGCATGTTG+TGG - chr4_3:20064945-20064964 None:intergenic 40.0%
!!! GTTGGTAGCTTTTGACAAAG+AGG - chr4_3:20065053-20065072 None:intergenic 40.0%
AAAGCTACCAACTTCAGACT+TGG + chr4_3:20065061-20065080 Msa0633880:intron 40.0%
TTTCTACGAGGTTCGAACTT+CGG + chr4_3:20065194-20065213 Msa0633880:intron 40.0%
! AAAGAGGACACCCGATTTTA+TGG - chr4_3:20065650-20065669 None:intergenic 40.0%
! GGAGACTCTTTGATAGCTTT+AGG + chr4_3:20066023-20066042 Msa0633880:intron 40.0%
!! GGGCATCGACTAATTTGTAT+TGG - chr4_3:20066105-20066124 None:intergenic 40.0%
GTTTCAATCTTTCCGTCTTC+GGG + chr4_3:20066359-20066378 Msa0633880:intron 40.0%
ATAGAAAATGGACCCGAAGA+CGG - chr4_3:20066374-20066393 None:intergenic 40.0%
TGGTCACTCTCAAATGTAGT+TGG - chr4_3:20066579-20066598 None:intergenic 40.0%
! TTTTCGAACAAGATCCCCTA+CGG + chr4_3:20066911-20066930 Msa0633880:intron 40.0%
ATTGGATATTCCAACCGTAG+GGG - chr4_3:20066928-20066947 None:intergenic 40.0%
! AGAACCATGTTTGGGATACT+TGG + chr4_3:20067472-20067491 Msa0633880:CDS 40.0%
AGCAATTGCACACAGTTTGA+CGG - chr4_3:20067577-20067596 None:intergenic 40.0%
!! TGGAGGTACTAATCTTGTAG+GGG - chr4_3:20067685-20067704 None:intergenic 40.0%
!! GTGGAGGTACTAATCTTGTA+GGG - chr4_3:20067686-20067705 None:intergenic 40.0%
AATATACCTGTTGCAGTTGG+TGG - chr4_3:20067705-20067724 None:intergenic 40.0%
GTGAATATACCTGTTGCAGT+TGG - chr4_3:20067708-20067727 None:intergenic 40.0%
TGGCTTCAAAATCGATCGAT+AGG + chr4_3:20067846-20067865 Msa0633880:intron 40.0%
AGTATTATATACAGGGGTCG+GGG - chr4_3:20068073-20068092 None:intergenic 40.0%
GAGTATTATATACAGGGGTC+GGG - chr4_3:20068074-20068093 None:intergenic 40.0%
!!! GTTTTTGCCGACTTAAAACG+AGG + chr4_3:20068524-20068543 Msa0633880:intron 40.0%
! GTACTTTTGCCCCATGTTAT+TGG + chr4_3:20068749-20068768 Msa0633880:intron 40.0%
GGGTTTATAAAAGGAGTAGC+GGG - chr4_3:20068966-20068985 None:intergenic 40.0%
AGAGAAGTTACAGAGGAAGA+AGG + chr4_3:20069143-20069162 Msa0633880:CDS 40.0%
GAGAAGTTACAGAGGAAGAA+GGG + chr4_3:20069144-20069163 Msa0633880:CDS 40.0%
GATATCGCGAGTAATCTGGT+AGG - chr4_3:20059340-20059359 None:intergenic 45.0%
GGACCAAGGGATTTCGAAAA+CGG + chr4_3:20059807-20059826 Msa0633880:intron 45.0%
GACCAAGGGATTTCGAAAAC+GGG + chr4_3:20059808-20059827 Msa0633880:intron 45.0%
!! GAGAAGGTGCTAAAAGGAGA+AGG - chr4_3:20061185-20061204 None:intergenic 45.0%
! GGTTTTCTTAACTAGTGCCC+CGG + chr4_3:20061881-20061900 Msa0633880:intron 45.0%
! AATCAAGGGTGTGGAAGTTG+TGG + chr4_3:20061996-20062015 Msa0633880:CDS 45.0%
ATGGAGGAACTCTCAAAGAC+GGG + chr4_3:20062377-20062396 Msa0633880:intron 45.0%
AATTAAACGCCACCTCTTGG+GGG - chr4_3:20062422-20062441 None:intergenic 45.0%
CCAAATTAAACGCCACCTCT+TGG - chr4_3:20062425-20062444 None:intergenic 45.0%
CCAAGAGGTGGCGTTTAATT+TGG + chr4_3:20062422-20062441 Msa0633880:intron 45.0%
!! GGTGGCGTTTAATTTGGGAA+AGG + chr4_3:20062428-20062447 Msa0633880:intron 45.0%
!!! AGGACAGTTTTTTCCCACCA+TGG + chr4_3:20062448-20062467 Msa0633880:intron 45.0%
!!! GGACAGTTTTTTCCCACCAT+GGG + chr4_3:20062449-20062468 Msa0633880:intron 45.0%
AAAGGACACTTTCCCATGGT+GGG - chr4_3:20062464-20062483 None:intergenic 45.0%
AAAAGGACACTTTCCCATGG+TGG - chr4_3:20062465-20062484 None:intergenic 45.0%
TGGAAAAGGACACTTTCCCA+TGG - chr4_3:20062468-20062487 None:intergenic 45.0%
!!! ATGGGAAAGTGTCCTTTTCC+AGG + chr4_3:20062467-20062486 Msa0633880:intron 45.0%
!! AAAGTGTCCTTTTCCAGGAC+AGG + chr4_3:20062472-20062491 Msa0633880:intron 45.0%
TTTCCAGCATCAGAAGAAGG+AGG - chr4_3:20063031-20063050 None:intergenic 45.0%
CTCGAACAGGAAGAAGAGAA+AGG + chr4_3:20063114-20063133 Msa0633880:intron 45.0%
GAGAGAGAGAGAATGAGATG+AGG + chr4_3:20063199-20063218 Msa0633880:intron 45.0%
! GGGGATGAAAGAAAGTGTGT+TGG + chr4_3:20063351-20063370 Msa0633880:intron 45.0%
GAGGTAACAGGTGAAAGATC+TGG + chr4_3:20063557-20063576 Msa0633880:intron 45.0%
!! GGTGGCGTTTAATTTGGGAA+AGG - chr4_3:20062428-20062447 None:intergenic 45.0%
TGTTCACAACGTGCAAGTAG+AGG - chr4_3:20063844-20063863 None:intergenic 45.0%
CTCCTCAATCCACGTAATTG+TGG + chr4_3:20063893-20063912 Msa0633880:intron 45.0%
! TCCCACAATTACGTGGATTG+AGG - chr4_3:20063898-20063917 None:intergenic 45.0%
ATGTGTGTCCCACAATTACG+TGG - chr4_3:20063905-20063924 None:intergenic 45.0%
TTGAAGAAGGGGTCGTTTCA+AGG + chr4_3:20063933-20063952 Msa0633880:intron 45.0%
TGAAGAAGGGGTCGTTTCAA+GGG + chr4_3:20063934-20063953 Msa0633880:intron 45.0%
! TGGTGGGTCATATCACTAAG+TGG + chr4_3:20064031-20064050 Msa0633880:intron 45.0%
!! ACATTTGTCAAGAAGCGCCA+AGG - chr4_3:20064204-20064223 None:intergenic 45.0%
AATGTCGTCATCATGCAAGC+TGG + chr4_3:20064219-20064238 Msa0633880:intron 45.0%
TCATCATGCAAGCTGGCAAA+AGG + chr4_3:20064226-20064245 Msa0633880:intron 45.0%
AAGGCGTATTCACAGTAACG+AGG + chr4_3:20064245-20064264 Msa0633880:intron 45.0%
CGTATTCACAGTAACGAGGT+CGG + chr4_3:20064249-20064268 Msa0633880:intron 45.0%
!! GTAACGGGTGTCACAATTAG+TGG - chr4_3:20064275-20064294 None:intergenic 45.0%
AGGCTTGGGGGAAACTATTT+CGG + chr4_3:20064322-20064341 Msa0633880:intron 45.0%
! TTCGGACCTCTGGATTTTGA+CGG + chr4_3:20064340-20064359 Msa0633880:intron 45.0%
ATGTAATTGTGTGCATGGCG+GGG - chr4_3:20064568-20064587 None:intergenic 45.0%
GGCGACCAATGTTAGTAGTA+AGG - chr4_3:20064813-20064832 None:intergenic 45.0%
!! AAGGAAGCATCTCTTGCTGA+TGG - chr4_3:20064983-20065002 None:intergenic 45.0%
! AGCTTTTGACAAAGAGGGAG+AGG - chr4_3:20065047-20065066 None:intergenic 45.0%
TGTCAATTAGAGGGACCTCA+AGG + chr4_3:20065514-20065533 Msa0633880:intron 45.0%
TTCTCCTCATCTACCTTCTC+TGG + chr4_3:20066221-20066240 Msa0633880:intron 45.0%
AAGTGTGAAAGAGCCAGAGA+AGG - chr4_3:20066237-20066256 None:intergenic 45.0%
AGAATGCATGTGGATCGATG+TGG - chr4_3:20066874-20066893 None:intergenic 45.0%
TCCAACTCTCATCAATGCAG+TGG + chr4_3:20067144-20067163 Msa0633880:intron 45.0%
! ACCACTGCATTGATGAGAGT+TGG - chr4_3:20067148-20067167 None:intergenic 45.0%
AAAATGAGAGGAGGACCCTA+AGG - chr4_3:20067225-20067244 None:intergenic 45.0%
ATAGGACTGCCCCAATGTAT+GGG - chr4_3:20067261-20067280 None:intergenic 45.0%
CATGGTTGTGGCAATATGCA+TGG + chr4_3:20067379-20067398 Msa0633880:intron 45.0%
! ACCATGTTTGGGATACTTGG+TGG + chr4_3:20067475-20067494 Msa0633880:CDS 45.0%
! CCATGTTTGGGATACTTGGT+GGG + chr4_3:20067476-20067495 Msa0633880:CDS 45.0%
TCTCCTTCATCACAGTGTTG+TGG + chr4_3:20067509-20067528 Msa0633880:CDS 45.0%
AGGTACTAATCTTGTAGGGG+AGG - chr4_3:20067682-20067701 None:intergenic 45.0%
!! GGTGGAGGTACTAATCTTGT+AGG - chr4_3:20067687-20067706 None:intergenic 45.0%
! AAGTGAATAAGTGGGGTGTC+CGG + chr4_3:20068039-20068058 Msa0633880:intron 45.0%
! TGAGATTAGCTCGGTTGGTA+GGG - chr4_3:20068130-20068149 None:intergenic 45.0%
TACCAACCGAGCTAATCTCA+CGG + chr4_3:20068130-20068149 Msa0633880:intron 45.0%
ATTAGGCCGGTCAATGAGTA+AGG - chr4_3:20068560-20068579 None:intergenic 45.0%
GGCTTGAAGAGAAGTTACAG+AGG + chr4_3:20069136-20069155 Msa0633880:CDS 45.0%
!! AAAAAAAAAAAATAATCTAT+AGG + chr4_3:20059499-20059518 Msa0633880:intron 5.0%
!!! TTTTATTTTTTTTTCTTTTT+TGG + chr4_3:20059959-20059978 Msa0633880:intron 5.0%
!!! TTTATTTTTTTTTCTTTTTT+GGG + chr4_3:20059960-20059979 Msa0633880:intron 5.0%
!!! TAAATTTAGATTTTTTTTTT+TGG + chr4_3:20060587-20060606 Msa0633880:intron 5.0%
!! AATTTGATTAAATATTAAAA+GGG - chr4_3:20063057-20063076 None:intergenic 5.0%
!! TAATTTGATTAAATATTAAA+AGG - chr4_3:20063058-20063077 None:intergenic 5.0%
!!! TTTATTATTTTTTAATTGAA+TGG - chr4_3:20063584-20063603 None:intergenic 5.0%
!! ATTAAAAAATAATAAATCTA+TGG + chr4_3:20063588-20063607 Msa0633880:intron 5.0%
!! AAAAAAAAAAAAAAAGATAA+GGG + chr4_3:20066660-20066679 Msa0633880:intron 5.0%
!! TTATATATATGTTAATTAAA+AGG - chr4_3:20068171-20068190 None:intergenic 5.0%
! GGTCGTTGCATGTCTCGTTT+TGG + chr4_3:20059044-20059063 Msa0633880:exon 50.0%
GCTGCCCTATTTGCCTTATG+TGG + chr4_3:20059303-20059322 Msa0633880:CDS 50.0%
! CTCCCGTTTTCGAAATCCCT+TGG - chr4_3:20059813-20059832 None:intergenic 50.0%
CTGCACAAGGCGTGCTAAAA+GGG - chr4_3:20061232-20061251 None:intergenic 50.0%
! CTTTTAGCACGCCTTGTGCA+GGG + chr4_3:20061231-20061250 Msa0633880:intron 50.0%
! TTTTAGCACGCCTTGTGCAG+GGG + chr4_3:20061232-20061251 Msa0633880:intron 50.0%
TAGCAGATAACCCCTGCACA+AGG - chr4_3:20061245-20061264 None:intergenic 50.0%
TCATGTTAACCAGTGCTCCG+GGG - chr4_3:20061901-20061920 None:intergenic 50.0%
GTCATGTTAACCAGTGCTCC+GGG - chr4_3:20061902-20061921 None:intergenic 50.0%
GGTCATGTTAACCAGTGCTC+CGG - chr4_3:20061903-20061922 None:intergenic 50.0%
!! TTGTGGCGGATGTTGGATCA+AGG + chr4_3:20062013-20062032 Msa0633880:CDS 50.0%
GAATTGAACTGGTGCAGAGG+AGG - chr4_3:20062571-20062590 None:intergenic 50.0%
GTTCCTCCTTCTTCTGATGC+TGG + chr4_3:20063025-20063044 Msa0633880:intron 50.0%
GAGAGAATGAGATGAGGGTG+TGG + chr4_3:20063205-20063224 Msa0633880:intron 50.0%
! GAATGAGATGAGGGTGTGGT+CGG + chr4_3:20063209-20063228 Msa0633880:intron 50.0%
GTCTGAGAAAAGCTGGAGGA+TGG + chr4_3:20063296-20063315 Msa0633880:intron 50.0%
TGAGAAAAGCTGGAGGATGG+TGG + chr4_3:20063299-20063318 Msa0633880:intron 50.0%
GTTTCATATTCTTGGGGGGG+TGG - chr4_3:20063669-20063688 None:intergenic 50.0%
GGGAAACTATTTCGGACCTC+TGG + chr4_3:20064330-20064349 Msa0633880:intron 50.0%
GTTGGTATCGTTGTCACCTG+TGG + chr4_3:20064667-20064686 Msa0633880:intron 50.0%
! TTTCTAGTGACGGCTACCAC+AGG - chr4_3:20064686-20064705 None:intergenic 50.0%
AGAGCCAGAGAAGGTAGATG+AGG - chr4_3:20066228-20066247 None:intergenic 50.0%
GTTATCAGAGTAAGCCGTCG+TGG - chr4_3:20066442-20066461 None:intergenic 50.0%
TGCATGTGGATCGATGTGGT+AGG - chr4_3:20066870-20066889 None:intergenic 50.0%
GATAGGACTGCCCCAATGTA+TGG - chr4_3:20067262-20067281 None:intergenic 50.0%
GAGATTGCACCCTCTGCAAA+GGG - chr4_3:20067425-20067444 None:intergenic 50.0%
CCCACCAAGTATCCCAAACA+TGG - chr4_3:20067479-20067498 None:intergenic 50.0%
CCTTCATCACAGTGTTGTGG+CGG + chr4_3:20067512-20067531 Msa0633880:CDS 50.0%
TGAGGAAGGGAGTAATGCTG+CGG + chr4_3:20067631-20067650 Msa0633880:CDS 50.0%
!! ATACCTGTTGCAGTTGGTGG+AGG - chr4_3:20067702-20067721 None:intergenic 50.0%
! GTGAGATTAGCTCGGTTGGT+AGG - chr4_3:20068131-20068150 None:intergenic 50.0%
ACCAACCGAGCTAATCTCAC+GGG + chr4_3:20068131-20068150 Msa0633880:intron 50.0%
! GTGAAGGCATGCATCAAGTG+TGG + chr4_3:20068212-20068231 Msa0633880:intron 50.0%
! AAGAGGAGGAGGGCATAGAA+GGG - chr4_3:20069226-20069245 None:intergenic 50.0%
! TAAGAGGAGGAGGGCATAGA+AGG - chr4_3:20069227-20069246 None:intergenic 50.0%
CCTGCACAAGGCGTGCTAAA+AGG - chr4_3:20061233-20061252 None:intergenic 55.0%
! CCTTTTAGCACGCCTTGTGC+AGG + chr4_3:20061230-20061249 Msa0633880:intron 55.0%
! CAAGGGTGTGGAAGTTGTGG+CGG + chr4_3:20061999-20062018 Msa0633880:CDS 55.0%
!! GTGGAAGTTGTGGCGGATGT+TGG + chr4_3:20062006-20062025 Msa0633880:CDS 55.0%
AGCGTAAGAGATCCCCCAAG+AGG + chr4_3:20062407-20062426 Msa0633880:intron 55.0%
GTAAGAGATCCCCCAAGAGG+TGG + chr4_3:20062410-20062429 Msa0633880:intron 55.0%
! GTGTCCTTTTCCAGGACAGG+TGG + chr4_3:20062475-20062494 Msa0633880:intron 55.0%
! TCCTTTTCCAGGACAGGTGG+CGG + chr4_3:20062478-20062497 Msa0633880:intron 55.0%
TGGGGCTGTCTGAGAAAAGC+TGG + chr4_3:20063289-20063308 Msa0633880:intron 55.0%
GGCTGTCTGAGAAAAGCTGG+AGG + chr4_3:20063292-20063311 Msa0633880:intron 55.0%
! GAAAAGCTGGAGGATGGTGG+TGG + chr4_3:20063302-20063321 Msa0633880:intron 55.0%
!! ATGGTGGTGGCTGGTGTCAA+TGG + chr4_3:20063315-20063334 Msa0633880:intron 55.0%
! GCTGGTGTCAATGGAGGATG+CGG + chr4_3:20063324-20063343 Msa0633880:intron 55.0%
TCAATGGAGGATGCGGTGGT+GGG + chr4_3:20063331-20063350 Msa0633880:intron 55.0%
! GGGGGGGTGGCGTTTAATTT+GGG - chr4_3:20063656-20063675 None:intergenic 55.0%
TGGGGGGGTGGCGTTTAATT+TGG - chr4_3:20063657-20063676 None:intergenic 55.0%
GTCTTGAGCTGTGATGCGCT+GGG - chr4_3:20064460-20064479 None:intergenic 55.0%
CAGCGCATCACAGCTCAAGA+CGG + chr4_3:20064459-20064478 Msa0633880:intron 55.0%
CGAACAAGATCCCCTACGGT+TGG + chr4_3:20066915-20066934 Msa0633880:intron 55.0%
TGCAAGTGCACCCTTTGCAG+AGG + chr4_3:20067412-20067431 Msa0633880:intron 55.0%
GCAAGTGCACCCTTTGCAGA+GGG + chr4_3:20067413-20067432 Msa0633880:intron 55.0%
CGAGATTGCACCCTCTGCAA+AGG - chr4_3:20067426-20067445 None:intergenic 55.0%
AGTCTTCTGTCACCTGCTGC+TGG - chr4_3:20067451-20067470 None:intergenic 55.0%
CCGCCACAACACTGTGATGA+AGG - chr4_3:20067515-20067534 None:intergenic 55.0%
AGGCTGACGCCACATTTACC+GGG - chr4_3:20067662-20067681 None:intergenic 55.0%
GAGGCTGACGCCACATTTAC+CGG - chr4_3:20067663-20067682 None:intergenic 55.0%
GTACCTCCACCAACTGCAAC+AGG + chr4_3:20067696-20067715 Msa0633880:intron 55.0%
CCAACCGAGCTAATCTCACG+GGG + chr4_3:20068132-20068151 Msa0633880:intron 55.0%
TAACTAGTGCCCCGGAGCAC+TGG + chr4_3:20061889-20061908 Msa0633880:intron 60.0%
ACCGCCACCTGTCCTGGAAA+AGG - chr4_3:20062482-20062501 None:intergenic 60.0%
!! TTTTCCAGGACAGGTGGCGG+TGG + chr4_3:20062481-20062500 Msa0633880:intron 60.0%
! TTTCCAGGACAGGTGGCGGT+GGG + chr4_3:20062482-20062501 Msa0633880:intron 60.0%
! ACAGGTGGCGGTGGGTAAAC+TGG + chr4_3:20062490-20062509 Msa0633880:intron 60.0%
! GATGAGGGTGTGGTCGGTGA+TGG + chr4_3:20063215-20063234 Msa0633880:intron 60.0%
! GTCGGTGATGGTGACAACGC+CGG + chr4_3:20063227-20063246 Msa0633880:intron 60.0%
! TGATGGTGACAACGCCGGAG+AGG + chr4_3:20063232-20063251 Msa0633880:intron 60.0%
GATGGTGACAACGCCGGAGA+GGG + chr4_3:20063233-20063252 Msa0633880:intron 60.0%
! GTGGTGGCTGGTGTCAATGG+AGG + chr4_3:20063318-20063337 Msa0633880:intron 60.0%
GGTGTCAATGGAGGATGCGG+TGG + chr4_3:20063327-20063346 Msa0633880:intron 60.0%
GTCAATGGAGGATGCGGTGG+TGG + chr4_3:20063330-20063349 Msa0633880:intron 60.0%
CAATGGAGGATGCGGTGGTG+GGG + chr4_3:20063332-20063351 Msa0633880:intron 60.0%
CGTCTTGAGCTGTGATGCGC+TGG - chr4_3:20064461-20064480 None:intergenic 60.0%
! TTGTGTGCATGGCGGGGAAG+AGG - chr4_3:20064562-20064581 None:intergenic 60.0%
TGCAATCTCGTGCCAGCAGC+AGG + chr4_3:20067436-20067455 Msa0633880:intron 60.0%
GGCTGACGCCACATTTACCG+GGG - chr4_3:20067661-20067680 None:intergenic 60.0%
! CCCCGTGAGATTAGCTCGGT+TGG - chr4_3:20068135-20068154 None:intergenic 60.0%
! GCGTCCCCGTGAGATTAGCT+CGG - chr4_3:20068139-20068158 None:intergenic 60.0%
TTACCCACCGCCACCTGTCC+TGG - chr4_3:20062488-20062507 None:intergenic 65.0%
TGACAACGCCGGAGAGGGTG+AGG + chr4_3:20063238-20063257 Msa0633880:intron 65.0%
AGGCAGCGGAGAGGAGGACA+GGG + chr4_3:20063262-20063281 Msa0633880:intron 65.0%
GAGAGGAGGACAGGGGCGAT+GGG + chr4_3:20063270-20063289 Msa0633880:intron 65.0%
AGAGGAGGACAGGGGCGATG+GGG + chr4_3:20063271-20063290 Msa0633880:intron 65.0%
!! AGCTGGAGGATGGTGGTGGC+TGG + chr4_3:20063306-20063325 Msa0633880:intron 65.0%
AGTAATGCTGCGGCGCTCCC+CGG + chr4_3:20067641-20067660 Msa0633880:CDS 65.0%
AGGGGTCGGGGTTCGAACTC+CGG - chr4_3:20068061-20068080 None:intergenic 65.0%
AACGCCGGAGAGGGTGAGGC+AGG + chr4_3:20063242-20063261 Msa0633880:intron 70.0%
GCTGCCTGCCTCACCCTCTC+CGG - chr4_3:20063249-20063268 None:intergenic 70.0%
GGAGAGGGTGAGGCAGGCAG+CGG + chr4_3:20063248-20063267 Msa0633880:intron 70.0%
TGAGGCAGGCAGCGGAGAGG+AGG + chr4_3:20063256-20063275 Msa0633880:intron 70.0%
CAGGCAGCGGAGAGGAGGAC+AGG + chr4_3:20063261-20063280 Msa0633880:intron 70.0%
GGCAGCGGAGAGGAGGACAG+GGG + chr4_3:20063263-20063282 Msa0633880:intron 70.0%
GGAGAGGAGGACAGGGGCGA+TGG + chr4_3:20063269-20063288 Msa0633880:intron 70.0%
GCGGCGCTCCCCGGTAAATG+TGG + chr4_3:20067650-20067669 Msa0633880:intron 70.0%
GGGTGAGGCAGGCAGCGGAG+AGG + chr4_3:20063253-20063272 Msa0633880:intron 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 20059022 20069248 20059022 ID=Msa0633880;Name=Msa0633880
chr4_3 mRNA 20059022 20069248 20059022 ID=Msa0633880-mRNA-1;Parent=Msa0633880;Name=Msa0633880-mRNA-1;_AED=0.26;_eAED=0.28;_QI=31|0|0|1|0.5|0|5|0|200
chr4_3 exon 20059022 20059065 20059022 ID=Msa0633880-mRNA-1:exon:5397;Parent=Msa0633880-mRNA-1
chr4_3 exon 20059157 20059370 20059157 ID=Msa0633880-mRNA-1:exon:5398;Parent=Msa0633880-mRNA-1
chr4_3 exon 20061996 20062041 20061996 ID=Msa0633880-mRNA-1:exon:5399;Parent=Msa0633880-mRNA-1
chr4_3 exon 20067458 20067662 20067458 ID=Msa0633880-mRNA-1:exon:5400;Parent=Msa0633880-mRNA-1
chr4_3 exon 20069127 20069248 20069127 ID=Msa0633880-mRNA-1:exon:5401;Parent=Msa0633880-mRNA-1
chr4_3 five_prime_UTR 20059022 20059052 20059022 ID=Msa0633880-mRNA-1:five_prime_utr;Parent=Msa0633880-mRNA-1
chr4_3 CDS 20059053 20059065 20059053 ID=Msa0633880-mRNA-1:cds;Parent=Msa0633880-mRNA-1
chr4_3 CDS 20059157 20059370 20059157 ID=Msa0633880-mRNA-1:cds;Parent=Msa0633880-mRNA-1
chr4_3 CDS 20061996 20062041 20061996 ID=Msa0633880-mRNA-1:cds;Parent=Msa0633880-mRNA-1
chr4_3 CDS 20067458 20067662 20067458 ID=Msa0633880-mRNA-1:cds;Parent=Msa0633880-mRNA-1
chr4_3 CDS 20069127 20069248 20069127 ID=Msa0633880-mRNA-1:cds;Parent=Msa0633880-mRNA-1
Gene Sequence

>Msa0633880

ATGTCTCGTTTTGGTTATATTTCAACTGCTGACCCATATTGTTGTGAAGCAGTGAAGAAAGTTGACAATGACGCCATCGACTATGATGATCGTCTAGAAACTTGTGACTGCTTGAGAGATATGGCTCTTTCTTTAAAGACTTTGAGTGTGGAGAATGGTGCTGCCCTATTTGCCTTATGTGGTATTCAAACACCCTACCAGATTACTCGCGATATCAACTGTACCAAAATCAAGGGTGTGGAAGTTGTGGCGGATGTTGGATCAAGGAATACTGTGACAGAAGACTTAGAACCATGTTTGGGATACTTGGTGGGTGATTCATCATCTCCTTCATCACAGTGTTGTGGCGGAGTGAAGAATCTAGATTCTGCAGCAAGTACAACTAGTGACCGTCAAACTGTGTGCAATTGCTTGAAATCTCTTGCTTCTAGCTATAATATTTCTGGTGAGGAAGGGAGTAATGCTGCGGCGCTCCCCGCATCAATTAGGCTTGAAGAGAAGTTACAGAGGAAGAAGGGTAGTAAAATTCAGAGTACTATATATATTGAGAATAAGAATGAAAATGAAGGGGATTCCCTTCTATGCCCTCCTCCTCTTATA

Protein sequence

>Msa0633880

MSRFGYISTADPYCCEAVKKVDNDAIDYDDRLETCDCLRDMALSLKTLSVENGAALFALCGIQTPYQITRDINCTKIKGVEVVADVGSRNTVTEDLEPCLGYLVGDSSSPSSQCCGGVKNLDSAASTTSDRQTVCNCLKSLASSYNISGEEGSNAAALPASIRLEEKLQRKKGSKIQSTIYIENKNENEGDSLLCPPPLI