Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0834250 | KEH27464.1 | 92.149 | 242 | 12 | 2 | 1 | 235 | 1 | 242 | 3.92e-160 | 459 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0834250 | sp|Q93YQ3|PURU1_ARATH | 45.541 | 314 | 150 | 5 | 26 | 320 | 2 | 313 | 1.30e-90 | 278 |
| Msa0834250 | sp|Q93YQ3|PURU1_ARATH | 68.085 | 47 | 15 | 0 | 233 | 279 | 276 | 322 | 8.89e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0834250 | A0A072UCF8 | 92.149 | 242 | 12 | 2 | 1 | 235 | 1 | 242 | 1.87e-160 | 459 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017420 | Msa0834250 | 0.805305 | 1.423419e-49 | -8.615850e-47 |
| Msa0021710 | Msa0834250 | 0.802758 | 4.818293e-49 | -8.615850e-47 |
| Msa0022960 | Msa0834250 | 0.805071 | 1.593573e-49 | -8.615850e-47 |
| Msa0028450 | Msa0834250 | 0.808740 | 2.669131e-50 | -8.615850e-47 |
| Msa0030740 | Msa0834250 | 0.811023 | 8.612691e-51 | -8.615850e-47 |
| Msa0034340 | Msa0834250 | 0.811008 | 8.676458e-51 | -8.615850e-47 |
| Msa0046410 | Msa0834250 | 0.819597 | 1.068222e-52 | -8.615850e-47 |
| Msa0046670 | Msa0834250 | 0.817354 | 3.443767e-52 | -8.615850e-47 |
| Msa0059590 | Msa0834250 | 0.801059 | 1.076290e-48 | -8.615850e-47 |
| Msa0062750 | Msa0834250 | 0.816086 | 6.628835e-52 | -8.615850e-47 |
| Msa0072710 | Msa0834250 | 0.822350 | 2.483596e-53 | -8.615850e-47 |
| Msa0078080 | Msa0834250 | 0.808133 | 3.597430e-50 | -8.615850e-47 |
| Msa0079550 | Msa0834250 | 0.800290 | 1.544645e-48 | -8.615850e-47 |
| Msa0092750 | Msa0834250 | 0.804995 | 1.652576e-49 | -8.615850e-47 |
| Msa0116260 | Msa0834250 | 0.814002 | 1.923306e-51 | -8.615850e-47 |
| Msa0606140 | Msa0834250 | 0.813522 | 2.453264e-51 | -8.615850e-47 |
| Msa0608940 | Msa0834250 | 0.807159 | 5.792550e-50 | -8.615850e-47 |
| Msa0615850 | Msa0834250 | 0.805432 | 1.338796e-49 | -8.615850e-47 |
| Msa0626890 | Msa0834250 | 0.817979 | 2.489501e-52 | -8.615850e-47 |
| Msa0626900 | Msa0834250 | 0.800579 | 1.348800e-48 | -8.615850e-47 |
| Msa0635350 | Msa0834250 | 0.830598 | 2.683452e-55 | -8.615850e-47 |
| Msa0642150 | Msa0834250 | 0.832256 | 1.048367e-55 | -8.615850e-47 |
| Msa0644610 | Msa0834250 | 0.800833 | 1.197136e-48 | -8.615850e-47 |
| Msa0650860 | Msa0834250 | 0.822628 | 2.140153e-53 | -8.615850e-47 |
| Msa0659130 | Msa0834250 | 0.828205 | 1.023102e-54 | -8.615850e-47 |
| Msa0665040 | Msa0834250 | 0.829841 | 4.106630e-55 | -8.615850e-47 |
| Msa0668000 | Msa0834250 | 0.814188 | 1.749620e-51 | -8.615850e-47 |
| Msa0672350 | Msa0834250 | 0.832175 | 1.097979e-55 | -8.615850e-47 |
| Msa0687320 | Msa0834250 | 0.837546 | 4.876738e-57 | -8.615850e-47 |
| Msa0697230 | Msa0834250 | 0.807658 | 4.538504e-50 | -8.615850e-47 |
| Msa0698900 | Msa0834250 | 0.802782 | 4.763673e-49 | -8.615850e-47 |
| Msa0701460 | Msa0834250 | 0.811880 | 5.611581e-51 | -8.615850e-47 |
| Msa0701530 | Msa0834250 | 0.810668 | 1.028062e-50 | -8.615850e-47 |
| Msa0702120 | Msa0834250 | 0.806804 | 6.886841e-50 | -8.615850e-47 |
| Msa0705610 | Msa0834250 | 0.825962 | 3.521861e-54 | -8.615850e-47 |
| Msa0711510 | Msa0834250 | 0.801149 | 1.031817e-48 | -8.615850e-47 |
| Msa0712670 | Msa0834250 | 0.810375 | 1.189111e-50 | -8.615850e-47 |
| Msa0715180 | Msa0834250 | 0.801540 | 8.579754e-49 | -8.615850e-47 |
| Msa0716670 | Msa0834250 | 0.811567 | 6.564355e-51 | -8.615850e-47 |
| Msa0720850 | Msa0834250 | 0.832453 | 9.374047e-56 | -8.615850e-47 |
| Msa0726000 | Msa0834250 | 0.822215 | 2.668492e-53 | -8.615850e-47 |
| Msa0729590 | Msa0834250 | 0.837395 | 5.332702e-57 | -8.615850e-47 |
| Msa0751640 | Msa0834250 | 0.805457 | 1.322578e-49 | -8.615850e-47 |
| Msa0755570 | Msa0834250 | 0.803169 | 3.963744e-49 | -8.615850e-47 |
| Msa0761930 | Msa0834250 | 0.850029 | 2.211214e-60 | -8.615850e-47 |
| Msa0762390 | Msa0834250 | 0.800790 | 1.221533e-48 | -8.615850e-47 |
| Msa0762470 | Msa0834250 | 0.800531 | 1.379879e-48 | -8.615850e-47 |
| Msa0766880 | Msa0834250 | 0.801696 | 7.973202e-49 | -8.615850e-47 |
| Msa0796610 | Msa0834250 | 0.807049 | 6.110988e-50 | -8.615850e-47 |
| Msa0804930 | Msa0834250 | 0.826894 | 2.111596e-54 | -8.615850e-47 |
| Msa0807840 | Msa0834250 | 0.816612 | 5.054998e-52 | -8.615850e-47 |
| Msa0833910 | Msa0834250 | 0.819914 | 9.041728e-53 | -8.615850e-47 |
| Msa0834160 | Msa0834250 | 0.825272 | 5.130368e-54 | -8.615850e-47 |
| Msa0834250 | Msa0836200 | 0.820434 | 6.872294e-53 | -8.615850e-47 |
| Msa0834250 | Msa0837590 | 0.811857 | 5.675146e-51 | -8.615850e-47 |
| Msa0834250 | Msa0840450 | 0.819816 | 9.522124e-53 | -8.615850e-47 |
| Msa0834250 | Msa0841980 | 0.809194 | 2.134911e-50 | -8.615850e-47 |
| Msa0834250 | Msa0853920 | 0.805594 | 1.238299e-49 | -8.615850e-47 |
| Msa0834250 | Msa0868040 | 0.834681 | 2.604634e-56 | -8.615850e-47 |
| Msa0834250 | Msa0880370 | 0.804981 | 1.663590e-49 | -8.615850e-47 |
| Msa0834250 | Msa0899140 | 0.823802 | 1.138648e-53 | -8.615850e-47 |
| Msa0834250 | Msa0905170 | 0.807194 | 5.694408e-50 | -8.615850e-47 |
| Msa0834250 | Msa0910650 | 0.815371 | 9.564936e-52 | -8.615850e-47 |
| Msa0834250 | Msa0921200 | 0.801499 | 8.748283e-49 | -8.615850e-47 |
| Msa0834250 | Msa0930150 | 0.803629 | 3.181576e-49 | -8.615850e-47 |
| Msa0834250 | Msa0932040 | 0.819855 | 9.329259e-53 | -8.615850e-47 |
| Msa0834250 | Msa0959970 | 0.805798 | 1.121617e-49 | -8.615850e-47 |
| Msa0834250 | Msa0964570 | 0.843473 | 1.371119e-58 | -8.615850e-47 |
| Msa0834250 | Msa0970120 | 0.829672 | 4.515286e-55 | -8.615850e-47 |
| Msa0834250 | Msa0970160 | 0.812304 | 4.535487e-51 | -8.615850e-47 |
| Msa0834250 | Msa0978290 | 0.831148 | 1.966623e-55 | -8.615850e-47 |
| Msa0834250 | Msa0978440 | 0.817874 | 2.630005e-52 | -8.615850e-47 |
| Msa0834250 | Msa0981300 | 0.837034 | 6.596332e-57 | -8.615850e-47 |
| Msa0834250 | Msa0982810 | 0.801466 | 8.886665e-49 | -8.615850e-47 |
| Msa0834250 | Msa0985570 | 0.813403 | 2.605642e-51 | -8.615850e-47 |
| Msa0834250 | Msa1004140 | 0.803082 | 4.131648e-49 | -8.615850e-47 |
| Msa0834250 | Msa1028720 | 0.805716 | 1.167139e-49 | -8.615850e-47 |
| Msa0834250 | Msa1031220 | 0.811247 | 7.704102e-51 | -8.615850e-47 |
| Msa0834250 | Msa1031620 | 0.810994 | 8.737011e-51 | -8.615850e-47 |
| Msa0834250 | Msa1031650 | 0.823277 | 1.510112e-53 | -8.615850e-47 |
| Msa0834250 | Msa1033160 | 0.808398 | 3.158087e-50 | -8.615850e-47 |
| Msa0834250 | Msa1033460 | 0.815191 | 1.049184e-51 | -8.615850e-47 |
| Msa0834250 | Msa1038040 | 0.800187 | 1.621094e-48 | -8.615850e-47 |
| Msa0834250 | Msa1045860 | 0.801082 | 1.064839e-48 | -8.615850e-47 |
| Msa0834250 | Msa1070930 | 0.828347 | 9.457469e-55 | -8.615850e-47 |
| Msa0834250 | Msa1072640 | 0.813699 | 2.242198e-51 | -8.615850e-47 |
| Msa0834250 | Msa1073140 | 0.822132 | 2.789446e-53 | -8.615850e-47 |
| Msa0834250 | Msa1076650 | 0.803045 | 4.204297e-49 | -8.615850e-47 |
| Msa0834250 | Msa1087410 | 0.803864 | 2.843804e-49 | -8.615850e-47 |
| Msa0834250 | Msa1088690 | 0.834934 | 2.249004e-56 | -8.615850e-47 |
| Msa0834250 | Msa1090230 | 0.806224 | 9.124339e-50 | -8.615850e-47 |
| Msa0834250 | Msa1106830 | 0.816383 | 5.689713e-52 | -8.615850e-47 |
| Msa0834250 | Msa1111670 | 0.805593 | 1.238766e-49 | -8.615850e-47 |
| Msa0834250 | Msa1113780 | 0.803584 | 3.251399e-49 | -8.615850e-47 |
| Msa0834250 | Msa1118870 | 0.813777 | 2.155692e-51 | -8.615850e-47 |
| Msa0834250 | Msa1118890 | 0.813337 | 2.694126e-51 | -8.615850e-47 |
| Msa0834250 | Msa1121580 | 0.804313 | 2.294203e-49 | -8.615850e-47 |
| Msa0834250 | Msa1127530 | 0.818265 | 2.144906e-52 | -8.615850e-47 |
| Msa0834250 | Msa1132540 | 0.846835 | 1.692558e-59 | -8.615850e-47 |
| Msa0834250 | Msa1140940 | 0.808907 | 2.458954e-50 | -8.615850e-47 |
| Msa0834250 | Msa1144420 | 0.814951 | 1.185720e-51 | -8.615850e-47 |
| Msa0834250 | Msa1150170 | 0.805217 | 1.484721e-49 | -8.615850e-47 |
| Msa0834250 | Msa1154130 | 0.818191 | 2.230000e-52 | -8.615850e-47 |
| Msa0834250 | Msa1156270 | 0.837170 | 6.085804e-57 | -8.615850e-47 |
| Msa0834250 | Msa1160470 | 0.809567 | 1.775068e-50 | -8.615850e-47 |
| Msa0834250 | Msa1165330 | 0.819883 | 9.191400e-53 | -8.615850e-47 |
| Msa0834250 | Msa1166020 | 0.809929 | 1.483604e-50 | -8.615850e-47 |
| Msa0834250 | Msa1173410 | 0.834111 | 3.619505e-56 | -8.615850e-47 |
| Msa0834250 | Msa1178970 | 0.803054 | 4.187161e-49 | -8.615850e-47 |
| Msa0834250 | Msa1182400 | 0.808787 | 2.608469e-50 | -8.615850e-47 |
| Msa0834250 | Msa1182480 | 0.812304 | 4.535422e-51 | -8.615850e-47 |
| Msa0834250 | Msa1182950 | 0.801282 | 9.689989e-49 | -8.615850e-47 |
| Msa0834250 | Msa1182960 | 0.813514 | 2.463369e-51 | -8.615850e-47 |
| Msa0834250 | Msa1183730 | 0.827267 | 1.719129e-54 | -8.615850e-47 |
| Msa0834250 | Msa1193680 | 0.815702 | 8.076079e-52 | -8.615850e-47 |
| Msa0834250 | Msa1196910 | 0.800016 | 1.756566e-48 | -8.615850e-47 |
| Msa0834250 | Msa1196990 | 0.819530 | 1.106887e-52 | -8.615850e-47 |
| Msa0834250 | Msa1199690 | 0.813866 | 2.060803e-51 | -8.615850e-47 |
| Msa0834250 | Msa1203840 | 0.824344 | 8.494547e-54 | -8.615850e-47 |
| Msa0834250 | Msa1203860 | 0.812208 | 4.759330e-51 | -8.615850e-47 |
| Msa0834250 | Msa1205560 | 0.806294 | 8.823419e-50 | -8.615850e-47 |
| Msa0834250 | Msa1209790 | 0.815044 | 1.131106e-51 | -8.615850e-47 |
| Msa0834250 | Msa1212070 | 0.809624 | 1.725886e-50 | -8.615850e-47 |
| Msa0834250 | Msa1220740 | 0.806622 | 7.521295e-50 | -8.615850e-47 |
| Msa0834250 | Msa1223600 | 0.810724 | 9.998955e-51 | -8.615850e-47 |
| Msa0834250 | Msa1229880 | 0.810059 | 1.391598e-50 | -8.615850e-47 |
| Msa0834250 | Msa1230190 | 0.813352 | 2.673968e-51 | -8.615850e-47 |
| Msa0834250 | Msa1235040 | 0.819753 | 9.841576e-53 | -8.615850e-47 |
| Msa0834250 | Msa1236990 | 0.809413 | 1.915439e-50 | -8.615850e-47 |
| Msa0834250 | Msa1240090 | 0.809123 | 2.210078e-50 | -8.615850e-47 |
| Msa0834250 | Msa1244180 | 0.825993 | 3.462718e-54 | -8.615850e-47 |
| Msa0834250 | Msa1249740 | 0.824464 | 7.956719e-54 | -8.615850e-47 |
| Msa0834250 | Msa1258200 | 0.812072 | 5.095931e-51 | -8.615850e-47 |
| Msa0834250 | Msa1263460 | 0.814563 | 1.445290e-51 | -8.615850e-47 |
| Msa0834250 | Msa1263600 | 0.803479 | 3.418178e-49 | -8.615850e-47 |
| Msa0834250 | Msa1267800 | 0.811908 | 5.533940e-51 | -8.615850e-47 |
| Msa0834250 | Msa1272770 | 0.806305 | 8.772477e-50 | -8.615850e-47 |
| Msa0834250 | Msa1277830 | 0.808987 | 2.364392e-50 | -8.615850e-47 |
| Msa0834250 | Msa1277930 | 0.809004 | 2.343886e-50 | -8.615850e-47 |
| Msa0834250 | Msa1279240 | 0.820669 | 6.068967e-53 | -8.615850e-47 |
| Msa0834250 | Msa1296930 | 0.813526 | 2.448308e-51 | -8.615850e-47 |
| Msa0834250 | Msa1297540 | 0.801673 | 8.056704e-49 | -8.615850e-47 |
| Msa0834250 | Msa1300880 | 0.813085 | 3.060041e-51 | -8.615850e-47 |
| Msa0834250 | Msa1309910 | 0.822558 | 2.221557e-53 | -8.615850e-47 |
| Msa0834250 | Msa1310620 | 0.811717 | 6.087827e-51 | -8.615850e-47 |
| Msa0834250 | Msa1316720 | 0.803068 | 4.159057e-49 | -8.615850e-47 |
| Msa0834250 | Msa1317340 | 0.817444 | 3.286636e-52 | -8.615850e-47 |
| Msa0834250 | Msa1319520 | 0.840258 | 9.687291e-58 | -8.615850e-47 |
| Msa0834250 | Msa1320660 | 0.802503 | 5.438654e-49 | -8.615850e-47 |
| Msa0834250 | Msa1330910 | 0.820017 | 8.567129e-53 | -8.615850e-47 |
| Msa0834250 | Msa1331900 | 0.805180 | 1.511592e-49 | -8.615850e-47 |
| Msa0834250 | Msa1334650 | 0.804259 | 2.353537e-49 | -8.615850e-47 |
| Msa0834250 | Msa1335130 | 0.830401 | 2.998974e-55 | -8.615850e-47 |
| Msa0834250 | Msa1336350 | 0.809096 | 2.239776e-50 | -8.615850e-47 |
| Msa0834250 | Msa1342080 | 0.823978 | 1.035292e-53 | -8.615850e-47 |
| Msa0834250 | Msa1345120 | 0.807806 | 4.221952e-50 | -8.615850e-47 |
| Msa0834250 | Msa1350350 | 0.819478 | 1.137265e-52 | -8.615850e-47 |
| Msa0834250 | Msa1352820 | 0.807599 | 4.672878e-50 | -8.615850e-47 |
| Msa0834250 | Msa1356500 | 0.820295 | 7.395828e-53 | -8.615850e-47 |
| Msa0834250 | Msa1364650 | 0.827974 | 1.163154e-54 | -8.615850e-47 |
| Msa0834250 | Msa1366700 | 0.809516 | 1.820983e-50 | -8.615850e-47 |
| Msa0834250 | Msa1368800 | 0.804493 | 2.103713e-49 | -8.615850e-47 |
| Msa0834250 | Msa1374610 | 0.821600 | 3.703531e-53 | -8.615850e-47 |
| Msa0834250 | Msa1381830 | 0.801664 | 8.092949e-49 | -8.615850e-47 |
| Msa0834250 | Msa1384980 | 0.813677 | 2.267450e-51 | -8.615850e-47 |
| Msa0834250 | Msa1385940 | 0.804190 | 2.433199e-49 | -8.615850e-47 |
| Msa0834250 | Msa1387650 | 0.808243 | 3.408145e-50 | -8.615850e-47 |
| Msa0834250 | Msa1388070 | 0.829011 | 6.532747e-55 | -8.615850e-47 |
| Msa0834250 | Msa1392570 | 0.803934 | 2.750891e-49 | -8.615850e-47 |
| Msa0834250 | Msa1392680 | 0.811063 | 8.443072e-51 | -8.615850e-47 |
| Msa0834250 | Msa1396310 | 0.809661 | 1.694907e-50 | -8.615850e-47 |
| Msa0834250 | Msa1397110 | 0.802765 | 4.803860e-49 | -8.615850e-47 |
| Msa0834250 | Msa1420130 | 0.809534 | 1.804112e-50 | -8.615850e-47 |
| Msa0834250 | Msa1430940 | 0.804306 | 2.301430e-49 | -8.615850e-47 |
| Msa0834250 | Msa1432250 | 0.808549 | 2.933305e-50 | -8.615850e-47 |
| Msa0834250 | Msa1449510 | 0.808136 | 3.591890e-50 | -8.615850e-47 |
| Msa0834250 | Msa1450420 | 0.811549 | 6.622373e-51 | -8.615850e-47 |
| Msa0834250 | Msa1455000 | 0.838624 | 2.574244e-57 | -8.615850e-47 |
| Msa0834250 | Msa1459590 | 0.809118 | 2.215885e-50 | -8.615850e-47 |
| Msa0834250 | Msa1466170 | 0.813652 | 2.296801e-51 | -8.615850e-47 |
| Msa0139920 | Msa0834250 | 0.810976 | 8.818003e-51 | -8.615850e-47 |
| Msa0147800 | Msa0834250 | 0.809208 | 2.120247e-50 | -8.615850e-47 |
| Msa0151210 | Msa0834250 | 0.815968 | 7.044899e-52 | -8.615850e-47 |
| Msa0153640 | Msa0834250 | 0.828513 | 8.621345e-55 | -8.615850e-47 |
| Msa0155030 | Msa0834250 | 0.802324 | 5.921504e-49 | -8.615850e-47 |
| Msa0156780 | Msa0834250 | 0.815831 | 7.557310e-52 | -8.615850e-47 |
| Msa0170550 | Msa0834250 | 0.804079 | 2.566193e-49 | -8.615850e-47 |
| Msa0175900 | Msa0834250 | 0.806184 | 9.303524e-50 | -8.615850e-47 |
| Msa0184850 | Msa0834250 | 0.801844 | 7.433353e-49 | -8.615850e-47 |
| Msa0186750 | Msa0834250 | 0.823384 | 1.425637e-53 | -8.615850e-47 |
| Msa0195670 | Msa0834250 | 0.821056 | 4.946289e-53 | -8.615850e-47 |
| Msa0196620 | Msa0834250 | 0.821146 | 4.714156e-53 | -8.615850e-47 |
| Msa0203330 | Msa0834250 | 0.815624 | 8.405447e-52 | -8.615850e-47 |
| Msa0206600 | Msa0834250 | 0.810786 | 9.691843e-51 | -8.615850e-47 |
| Msa0213020 | Msa0834250 | 0.808164 | 3.543742e-50 | -8.615850e-47 |
| Msa0222510 | Msa0834250 | 0.820094 | 8.226426e-53 | -8.615850e-47 |
| Msa0222720 | Msa0834250 | 0.818934 | 1.512285e-52 | -8.615850e-47 |
| Msa0225030 | Msa0834250 | 0.800837 | 1.194828e-48 | -8.615850e-47 |
| Msa0226800 | Msa0834250 | 0.807996 | 3.847752e-50 | -8.615850e-47 |
| Msa0237440 | Msa0834250 | 0.805282 | 1.439100e-49 | -8.615850e-47 |
| Msa0238530 | Msa0834250 | 0.816505 | 5.342768e-52 | -8.615850e-47 |
| Msa0365150 | Msa0834250 | 0.819984 | 8.716550e-53 | -8.615850e-47 |
| Msa0367310 | Msa0834250 | 0.824470 | 7.933783e-54 | -8.615850e-47 |
| Msa0370510 | Msa0834250 | 0.803488 | 3.403176e-49 | -8.615850e-47 |
| Msa0372250 | Msa0834250 | 0.857736 | 1.332468e-62 | -8.615850e-47 |
| Msa0372550 | Msa0834250 | 0.808084 | 3.684337e-50 | -8.615850e-47 |
| Msa0375430 | Msa0834250 | 0.814712 | 1.339624e-51 | -8.615850e-47 |
| Msa0376900 | Msa0834250 | 0.812545 | 4.017298e-51 | -8.615850e-47 |
| Msa0377460 | Msa0834250 | 0.820715 | 5.925898e-53 | -8.615850e-47 |
| Msa0381990 | Msa0834250 | 0.819555 | 1.092193e-52 | -8.615850e-47 |
| Msa0390950 | Msa0834250 | 0.831686 | 1.449818e-55 | -8.615850e-47 |
| Msa0400900 | Msa0834250 | 0.804776 | 1.836799e-49 | -8.615850e-47 |
| Msa0405040 | Msa0834250 | 0.800768 | 1.234239e-48 | -8.615850e-47 |
| Msa0409000 | Msa0834250 | 0.801858 | 7.385059e-49 | -8.615850e-47 |
| Msa0411260 | Msa0834250 | 0.825495 | 4.544234e-54 | -8.615850e-47 |
| Msa0423590 | Msa0834250 | 0.810888 | 9.215108e-51 | -8.615850e-47 |
| Msa0425080 | Msa0834250 | 0.801372 | 9.286974e-49 | -8.615850e-47 |
| Msa0426860 | Msa0834250 | 0.817656 | 2.944438e-52 | -8.615850e-47 |
| Msa0426890 | Msa0834250 | 0.824595 | 7.412569e-54 | -8.615850e-47 |
| Msa0431310 | Msa0834250 | 0.810182 | 1.308865e-50 | -8.615850e-47 |
| Msa0449030 | Msa0834250 | 0.828408 | 9.143103e-55 | -8.615850e-47 |
| Msa0455610 | Msa0834250 | 0.808995 | 2.354555e-50 | -8.615850e-47 |
| Msa0459920 | Msa0834250 | 0.819553 | 1.093290e-52 | -8.615850e-47 |
| Msa0463580 | Msa0834250 | 0.825701 | 4.061629e-54 | -8.615850e-47 |
| Msa0471890 | Msa0834250 | 0.810529 | 1.101606e-50 | -8.615850e-47 |
| Msa0473320 | Msa0834250 | 0.834827 | 2.392783e-56 | -8.615850e-47 |
| Msa0473450 | Msa0834250 | 0.806313 | 8.740299e-50 | -8.615850e-47 |
| Msa0476490 | Msa0834250 | 0.807935 | 3.964169e-50 | -8.615850e-47 |
| Msa0239980 | Msa0834250 | 0.801553 | 8.528784e-49 | -8.615850e-47 |
| Msa0243160 | Msa0834250 | 0.822859 | 1.890221e-53 | -8.615850e-47 |
| Msa0244320 | Msa0834250 | 0.801957 | 7.047237e-49 | -8.615850e-47 |
| Msa0249670 | Msa0834250 | 0.808199 | 3.482071e-50 | -8.615850e-47 |
| Msa0256430 | Msa0834250 | 0.804416 | 2.183319e-49 | -8.615850e-47 |
| Msa0263520 | Msa0834250 | 0.805619 | 1.223284e-49 | -8.615850e-47 |
| Msa0264020 | Msa0834250 | 0.829497 | 4.980012e-55 | -8.615850e-47 |
| Msa0267130 | Msa0834250 | 0.800061 | 1.719875e-48 | -8.615850e-47 |
| Msa0292150 | Msa0834250 | 0.814335 | 1.623616e-51 | -8.615850e-47 |
| Msa0292300 | Msa0834250 | 0.811002 | 8.702185e-51 | -8.615850e-47 |
| Msa0297320 | Msa0834250 | 0.808214 | 3.457044e-50 | -8.615850e-47 |
| Msa0301800 | Msa0834250 | 0.803560 | 3.288853e-49 | -8.615850e-47 |
| Msa0302020 | Msa0834250 | 0.828410 | 9.131774e-55 | -8.615850e-47 |
| Msa0304020 | Msa0834250 | 0.809623 | 1.726430e-50 | -8.615850e-47 |
| Msa0304870 | Msa0834250 | 0.802187 | 6.320356e-49 | -8.615850e-47 |
| Msa0307750 | Msa0834250 | 0.803807 | 2.922123e-49 | -8.615850e-47 |
| Msa0308300 | Msa0834250 | 0.810592 | 1.067683e-50 | -8.615850e-47 |
| Msa0312570 | Msa0834250 | 0.805240 | 1.468642e-49 | -8.615850e-47 |
| Msa0321230 | Msa0834250 | 0.847501 | 1.111442e-59 | -8.615850e-47 |
| Msa0323790 | Msa0834250 | 0.815736 | 7.934638e-52 | -8.615850e-47 |
| Msa0327870 | Msa0834250 | 0.817157 | 3.813586e-52 | -8.615850e-47 |
| Msa0330370 | Msa0834250 | 0.806207 | 9.201589e-50 | -8.615850e-47 |
| Msa0330770 | Msa0834250 | 0.801721 | 7.878672e-49 | -8.615850e-47 |
| Msa0334180 | Msa0834250 | 0.802031 | 6.802577e-49 | -8.615850e-47 |
| Msa0335860 | Msa0834250 | 0.834805 | 2.423470e-56 | -8.615850e-47 |
| Msa0338670 | Msa0834250 | 0.806018 | 1.008591e-49 | -8.615850e-47 |
| Msa0339340 | Msa0834250 | 0.826623 | 2.451340e-54 | -8.615850e-47 |
| Msa0341260 | Msa0834250 | 0.802217 | 6.230281e-49 | -8.615850e-47 |
| Msa0355590 | Msa0834250 | 0.828823 | 7.255902e-55 | -8.615850e-47 |
| Msa0358720 | Msa0834250 | 0.837859 | 4.053842e-57 | -8.615850e-47 |
| Msa0483090 | Msa0834250 | 0.801241 | 9.879843e-49 | -8.615850e-47 |
| Msa0483410 | Msa0834250 | 0.806348 | 8.591672e-50 | -8.615850e-47 |
| Msa0486870 | Msa0834250 | 0.802270 | 6.074978e-49 | -8.615850e-47 |
| Msa0489620 | Msa0834250 | 0.820526 | 6.547697e-53 | -8.615850e-47 |
| Msa0493430 | Msa0834250 | 0.837766 | 4.281277e-57 | -8.615850e-47 |
| Msa0497060 | Msa0834250 | 0.827322 | 1.668351e-54 | -8.615850e-47 |
| Msa0508620 | Msa0834250 | 0.804215 | 2.403934e-49 | -8.615850e-47 |
| Msa0508660 | Msa0834250 | 0.807280 | 5.460077e-50 | -8.615850e-47 |
| Msa0508770 | Msa0834250 | 0.832741 | 7.950634e-56 | -8.615850e-47 |
| Msa0515400 | Msa0834250 | 0.811257 | 7.663063e-51 | -8.615850e-47 |
| Msa0515420 | Msa0834250 | 0.808182 | 3.511402e-50 | -8.615850e-47 |
| Msa0515680 | Msa0834250 | 0.813337 | 2.694404e-51 | -8.615850e-47 |
| Msa0515830 | Msa0834250 | 0.834092 | 3.660185e-56 | -8.615850e-47 |
| Msa0517400 | Msa0834250 | 0.822643 | 2.122210e-53 | -8.615850e-47 |
| Msa0530250 | Msa0834250 | 0.810671 | 1.026466e-50 | -8.615850e-47 |
| Msa0558800 | Msa0834250 | 0.800674 | 1.290359e-48 | -8.615850e-47 |
| Msa0560010 | Msa0834250 | 0.812520 | 4.068927e-51 | -8.615850e-47 |
| Msa0562740 | Msa0834250 | 0.812690 | 3.733461e-51 | -8.615850e-47 |
| Msa0564580 | Msa0834250 | 0.804016 | 2.643875e-49 | -8.615850e-47 |
| Msa0568810 | Msa0834250 | 0.820261 | 7.532605e-53 | -8.615850e-47 |
| Msa0569630 | Msa0834250 | 0.813934 | 1.990225e-51 | -8.615850e-47 |
| Msa0574450 | Msa0834250 | 0.817409 | 3.347353e-52 | -8.615850e-47 |
| Msa0581190 | Msa0834250 | 0.813353 | 2.672261e-51 | -8.615850e-47 |
| Msa0587060 | Msa0834250 | 0.803249 | 3.814041e-49 | -8.615850e-47 |
| Msa0595240 | Msa0834250 | 0.808488 | 3.021326e-50 | -8.615850e-47 |
| Msa0595780 | Msa0834250 | 0.807095 | 5.976069e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0834250 | MtrunA17_Chr5g0399371 | 92.500 | 240 | 11 | 2 | 1 | 233 | 1 | 240 | 2.55e-162 | 459 |
| Msa0834250 | MtrunA17_Chr5g0399371 | 91.489 | 47 | 4 | 0 | 233 | 279 | 302 | 348 | 1.00e-19 | 89.4 |
| Msa0834250 | MtrunA17_Chr7g0220151 | 71.000 | 200 | 58 | 0 | 34 | 233 | 16 | 215 | 3.76e-101 | 302 |
| Msa0834250 | MtrunA17_Chr5g0399381 | 95.960 | 99 | 4 | 0 | 282 | 380 | 28 | 126 | 2.18e-64 | 201 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0834250 | AT4G17360.3 | 56.957 | 230 | 88 | 3 | 26 | 245 | 2 | 230 | 1.05e-92 | 278 |
| Msa0834250 | AT5G47435.1 | 45.541 | 314 | 150 | 5 | 26 | 320 | 2 | 313 | 1.32e-91 | 278 |
| Msa0834250 | AT5G47435.1 | 68.085 | 47 | 15 | 0 | 233 | 279 | 276 | 322 | 9.04e-13 | 68.9 |
| Msa0834250 | AT5G47435.2 | 45.541 | 314 | 150 | 5 | 26 | 320 | 2 | 313 | 1.32e-91 | 278 |
| Msa0834250 | AT5G47435.2 | 68.085 | 47 | 15 | 0 | 233 | 279 | 276 | 322 | 9.04e-13 | 68.9 |
| Msa0834250 | AT4G17360.1 | 45.886 | 316 | 145 | 5 | 26 | 319 | 2 | 313 | 2.69e-91 | 278 |
| Msa0834250 | AT4G17360.1 | 70.213 | 47 | 14 | 0 | 233 | 279 | 281 | 327 | 2.14e-13 | 70.9 |
| Msa0834250 | AT4G17360.2 | 58.257 | 218 | 81 | 2 | 26 | 233 | 2 | 219 | 4.15e-91 | 274 |
Find 61 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACGAATCACTTCGCTTTC+TGG | 0.117075 | 5_4:+7259614 | None:intergenic |
| CATGTAATTGTTCAATTATT+TGG | 0.131222 | 5_4:+7260793 | None:intergenic |
| TCAAAGGCACATGTTGAATT+TGG | 0.202436 | 5_4:+7257558 | None:intergenic |
| CGGATGTTGTTCATTTCATT+TGG | 0.291089 | 5_4:+7260716 | None:intergenic |
| TGGATATCACTTGTGTAATT+AGG | 0.300705 | 5_4:-7259751 | Msa0834250:intron |
| TCCTCTTCCATTTGCATTCG+AGG | 0.320625 | 5_4:+7260237 | None:intergenic |
| TGTTGAATTTGGCAAGGTTT+TGG | 0.325576 | 5_4:+7257569 | None:intergenic |
| AAGTTCAGGAAAATAATTAA+TGG | 0.336335 | 5_4:-7260829 | Msa0834250:five_prime_UTR |
| AGAACAGCAATCTTATACTT+AGG | 0.398072 | 5_4:+7260150 | None:intergenic |
| GGCCAATGTGCATGTCCCTT+TGG | 0.419715 | 5_4:-7257609 | Msa0834250:CDS |
| TAGACCACGTATATAAGTTC+AGG | 0.421366 | 5_4:-7260843 | None:intergenic |
| ACTGTAATTTCTGACAACTT+TGG | 0.422513 | 5_4:+7260670 | None:intergenic |
| CGCTTTCTGGACCTCTATCA+TGG | 0.423861 | 5_4:+7259627 | None:intergenic |
| GCAGAGCTTTGTGCAGAAAT+CGG | 0.425759 | 5_4:-7258902 | Msa0834250:CDS |
| AATAATGTTACCACCATTTG+AGG | 0.432255 | 5_4:+7260432 | None:intergenic |
| AGTTCAGGAAAATAATTAAT+GGG | 0.433866 | 5_4:-7260828 | Msa0834250:five_prime_UTR |
| AGACATGGATACCATGAGTT+AGG | 0.434671 | 5_4:+7260609 | None:intergenic |
| TGTCTGATTGATTCGTTACA+TGG | 0.436061 | 5_4:-7259797 | Msa0834250:CDS |
| ATGGCAGGATGGAAGACTTC+CGG | 0.464713 | 5_4:-7259774 | Msa0834250:CDS |
| TGAAACCAGAACACAATCTT+CGG | 0.465867 | 5_4:+7260696 | None:intergenic |
| TCAGATTGCATTGCCTCAAA+TGG | 0.473487 | 5_4:-7260445 | Msa0834250:CDS |
| AACATCCGAAGATTGTGTTC+TGG | 0.477882 | 5_4:-7260701 | Msa0834250:CDS |
| TAAATGGCCTCGAATGCAAA+TGG | 0.495596 | 5_4:-7260244 | Msa0834250:CDS |
| TTGCAGGGGTACAACTCAAA+AGG | 0.512891 | 5_4:-7257758 | Msa0834250:intron |
| GCCTCGAATGCAAATGGAAG+AGG | 0.516563 | 5_4:-7260238 | Msa0834250:CDS |
| TGGCCATTGAGGCATATACT+AGG | 0.518992 | 5_4:+7257627 | None:intergenic |
| CAAAAGGATGGTAGCAGCAC+AGG | 0.520230 | 5_4:-7257742 | Msa0834250:CDS |
| TCAAGTTCCTTCCTAACTCA+TGG | 0.520800 | 5_4:-7260620 | Msa0834250:CDS |
| AACAGAATGTTCAGGGCCAA+AGG | 0.532291 | 5_4:+7257593 | None:intergenic |
| TTGCCTAGTATATGCCTCAA+TGG | 0.532572 | 5_4:-7257630 | Msa0834250:CDS |
| AGAAGAGGATATCTTAAAGC+TGG | 0.532640 | 5_4:-7259534 | Msa0834250:CDS |
| CGCAAACTCCTGCATCACAT+CGG | 0.535594 | 5_4:+7257670 | None:intergenic |
| TGAGAAGCAATGTCTGTCAA+TGG | 0.537080 | 5_4:-7258872 | Msa0834250:CDS |
| TGTGAAAGCCGATGTGATGC+AGG | 0.546444 | 5_4:-7257678 | Msa0834250:CDS |
| TGCTGTTCTTGCATCAAACC+AGG | 0.548103 | 5_4:-7260136 | Msa0834250:intron |
| CAGTGTCACTGTGGATGTCA+TGG | 0.555585 | 5_4:-7257477 | Msa0834250:CDS |
| AAAAGAGAATAAAAGAGAAG+AGG | 0.557542 | 5_4:-7259549 | Msa0834250:CDS |
| TGATTCGTTACATGGATGGC+AGG | 0.557620 | 5_4:-7259789 | Msa0834250:CDS |
| GGCACATGTTGAATTTGGCA+AGG | 0.564536 | 5_4:+7257563 | None:intergenic |
| ACAGAATGTTCAGGGCCAAA+GGG | 0.565543 | 5_4:+7257594 | None:intergenic |
| TTTAACAGTAACCATGATAG+AGG | 0.567421 | 5_4:-7259638 | Msa0834250:intron |
| TCGTTACATGGATGGCAGGA+TGG | 0.585935 | 5_4:-7259785 | Msa0834250:CDS |
| GACATGCACATTGGCCATTG+AGG | 0.589703 | 5_4:+7257616 | None:intergenic |
| GGCCAAAGGGACATGCACAT+TGG | 0.590395 | 5_4:+7257607 | None:intergenic |
| ATGGATACCATGAGTTAGGA+AGG | 0.594334 | 5_4:+7260613 | None:intergenic |
| TGATTGATTCGTTACATGGA+TGG | 0.597800 | 5_4:-7259793 | Msa0834250:CDS |
| CTTCTAATGCTGCAATCAGA+AGG | 0.598090 | 5_4:+7257513 | None:intergenic |
| CAGCATTAGAAGCTGTCTTG+AGG | 0.605156 | 5_4:-7257502 | Msa0834250:CDS |
| CTTTAAGCAATCATCATCAA+AGG | 0.609564 | 5_4:+7257542 | None:intergenic |
| GATTGCATTGCCTCAAATGG+TGG | 0.622165 | 5_4:-7260442 | Msa0834250:CDS |
| TTATACTTAGGATCAAGAGC+TGG | 0.624265 | 5_4:+7260162 | None:intergenic |
| ATTACACAAGTGATATCCAC+CGG | 0.633129 | 5_4:+7259755 | None:intergenic |
| TTACAGGACATTGAAAGACA+TGG | 0.637625 | 5_4:+7260594 | None:intergenic |
| CTTGAGGCTCAGTGTCACTG+TGG | 0.648350 | 5_4:-7257486 | Msa0834250:CDS |
| AGGGGTACAACTCAAAAGGA+TGG | 0.650570 | 5_4:-7257754 | Msa0834250:CDS |
| AATAATTGAACAATTACATG+TGG | 0.654171 | 5_4:-7260790 | Msa0834250:exon |
| GTAACGAATCAATCAGACAA+TGG | 0.659219 | 5_4:+7259801 | None:intergenic |
| AGTACTAGCAAGGTATACGA+AGG | 0.663884 | 5_4:-7259492 | Msa0834250:intron |
| GGCATATACTAGGCAACTCG+AGG | 0.668865 | 5_4:+7257637 | None:intergenic |
| GCAGGATGGAAGACTTCCGG+TGG | 0.684815 | 5_4:-7259771 | Msa0834250:CDS |
| TGGTGGTAACATTATTGCTG+CGG | 0.706543 | 5_4:-7260425 | Msa0834250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAACATGAATAA+AGG | - | chr5_4:7260321-7260340 | Msa0834250:intron | 10.0% |
| !! | AAATGATGATAATAATTCAA+TGG | + | chr5_4:7257764-7257783 | None:intergenic | 15.0% |
| !!! | TATTTTTTTGTTTTTGTGAT+AGG | - | chr5_4:7257817-7257836 | Msa0834250:intron | 15.0% |
| !! | CCTTTATACATATAAATTAT+AGG | + | chr5_4:7258395-7258414 | None:intergenic | 15.0% |
| !! | CCTATAATTTATATGTATAA+AGG | - | chr5_4:7258392-7258411 | Msa0834250:intron | 15.0% |
| !!! | GTTGTTTTTAAATAATGATA+TGG | + | chr5_4:7258742-7258761 | None:intergenic | 15.0% |
| !! | TTTAATATGATAGATTATCT+TGG | - | chr5_4:7259173-7259192 | Msa0834250:intron | 15.0% |
| !! | CTAAGTTATTGTATAATAAT+TGG | - | chr5_4:7259840-7259859 | Msa0834250:intron | 15.0% |
| !! | TTTAAATTTGCAATATAATG+AGG | + | chr5_4:7260426-7260445 | None:intergenic | 15.0% |
| !! | AAGTTCAGGAAAATAATTAA+TGG | - | chr5_4:7257482-7257501 | Msa0834250:CDS | 20.0% |
| !! | AGTTCAGGAAAATAATTAAT+GGG | - | chr5_4:7257483-7257502 | Msa0834250:CDS | 20.0% |
| !! | CATGTAATTGTTCAATTATT+TGG | + | chr5_4:7257521-7257540 | None:intergenic | 20.0% |
| !! | AATAATTGAACAATTACATG+TGG | - | chr5_4:7257521-7257540 | Msa0834250:CDS | 20.0% |
| !! | TTCTATAAATAGAGTTAGTT+AGG | - | chr5_4:7258227-7258246 | Msa0834250:intron | 20.0% |
| !! | CAAATAAAATGAAGATAACA+TGG | + | chr5_4:7258261-7258280 | None:intergenic | 20.0% |
| !!! | TATTTTCTTAAGAGTAATTG+TGG | - | chr5_4:7258893-7258912 | Msa0834250:CDS | 20.0% |
| !! | TAAAAACAGCTTATAACATA+TGG | - | chr5_4:7259112-7259131 | Msa0834250:intron | 20.0% |
| !! | AAATTTATTGTTGACAAAGT+TGG | + | chr5_4:7260157-7260176 | None:intergenic | 20.0% |
| !!! | ATAAAGGATGTTAACAATTT+TGG | - | chr5_4:7260337-7260356 | Msa0834250:intron | 20.0% |
| ! | AAACATTTCACATGTGATAT+TGG | + | chr5_4:7257793-7257812 | None:intergenic | 25.0% |
| !! | TTTTTGTGATAGGATTCAAT+TGG | - | chr5_4:7257827-7257846 | Msa0834250:intron | 25.0% |
| !! | GTTTTTGTACCTCAAAATAA+AGG | - | chr5_4:7257911-7257930 | Msa0834250:intron | 25.0% |
| !! | TTGTTTTCGATCATGTTAAA+TGG | - | chr5_4:7258051-7258070 | Msa0834250:intron | 25.0% |
| !! | AACTTTTAATAATGTGTACC+TGG | + | chr5_4:7258196-7258215 | None:intergenic | 25.0% |
| ! | TTACTGTTAAATGTGATCAT+GGG | + | chr5_4:7258664-7258683 | None:intergenic | 25.0% |
| ! | AAAAGAGAATAAAAGAGAAG+AGG | - | chr5_4:7258762-7258781 | Msa0834250:intron | 25.0% |
| !! | TAATATCCAGTAGCTTTTTA+AGG | - | chr5_4:7258937-7258956 | Msa0834250:intron | 25.0% |
| ! | AATAACCTAAAGATAGCTTA+TGG | + | chr5_4:7259067-7259086 | None:intergenic | 25.0% |
| ! | TTCACCATTTGTTCAATAAT+AGG | + | chr5_4:7259271-7259290 | None:intergenic | 25.0% |
| !! | ACAGTATTCTTTTCTTCATA+TGG | + | chr5_4:7259497-7259516 | None:intergenic | 25.0% |
| !! | AAGAATACTGTTGTATTTTG+AGG | - | chr5_4:7259506-7259525 | Msa0834250:CDS | 25.0% |
| !!! | AGAATACTGTTGTATTTTGA+GGG | - | chr5_4:7259507-7259526 | Msa0834250:CDS | 25.0% |
| !! | AGTTGTTCAATTACACATTT+TGG | + | chr5_4:7259565-7259584 | None:intergenic | 25.0% |
| ! | GTACGTATTTATAATCTGAT+TGG | - | chr5_4:7259692-7259711 | Msa0834250:intron | 25.0% |
| !!! | CTGCTGAGTTTTTTTTATAA+AGG | - | chr5_4:7259738-7259757 | Msa0834250:intron | 25.0% |
| ! | AAAACATCACATTATTATGC+AGG | + | chr5_4:7259793-7259812 | None:intergenic | 25.0% |
| !! | TGCATAATAATGTGATGTTT+TGG | - | chr5_4:7259792-7259811 | Msa0834250:CDS | 25.0% |
| ! | CAATAGTGACAAATATATCT+TGG | + | chr5_4:7259871-7259890 | None:intergenic | 25.0% |
| ! | GATATATTTGTCACTATTGT+TGG | - | chr5_4:7259872-7259891 | Msa0834250:intron | 25.0% |
| ! | TAAAACTAACAAGAAACACA+AGG | - | chr5_4:7260049-7260068 | Msa0834250:intron | 25.0% |
| !! | AGGCATTAAACTAATAGTTT+TGG | - | chr5_4:7260069-7260088 | Msa0834250:intron | 25.0% |
| !! | ATTGCTATTAACCATGTTAT+TGG | - | chr5_4:7260118-7260137 | Msa0834250:intron | 25.0% |
| !! | TAAATTTTCGTCGAAAAATC+TGG | - | chr5_4:7260170-7260189 | Msa0834250:CDS | 25.0% |
| !!! | CCATCTAAAATTTTGCTAAA+TGG | + | chr5_4:7260297-7260316 | None:intergenic | 25.0% |
| !! | CCATTTAGCAAAATTTTAGA+TGG | - | chr5_4:7260294-7260313 | Msa0834250:intron | 25.0% |
| ! | GTATATTTCAATTGTGTCAA+TGG | + | chr5_4:7260400-7260419 | None:intergenic | 25.0% |
| ACTGTAATTTCTGACAACTT+TGG | + | chr5_4:7257644-7257663 | None:intergenic | 30.0% | |
| AATGGATGTGAGAATATGAA+TGG | + | chr5_4:7257746-7257765 | None:intergenic | 30.0% | |
| AATAATGTTACCACCATTTG+AGG | + | chr5_4:7257882-7257901 | None:intergenic | 30.0% | |
| !!! | TAGAAGAGTCCTTTATTTTG+AGG | + | chr5_4:7257923-7257942 | None:intergenic | 30.0% |
| AGAACAGCAATCTTATACTT+AGG | + | chr5_4:7258164-7258183 | None:intergenic | 30.0% | |
| TGGATATCACTTGTGTAATT+AGG | - | chr5_4:7258560-7258579 | Msa0834250:intron | 30.0% | |
| GTTACTGTTAAATGTGATCA+TGG | + | chr5_4:7258665-7258684 | None:intergenic | 30.0% | |
| TTTAACAGTAACCATGATAG+AGG | - | chr5_4:7258673-7258692 | Msa0834250:intron | 30.0% | |
| ! | AAGTGATTCGTTTTCTTCAA+AGG | - | chr5_4:7258707-7258726 | Msa0834250:intron | 30.0% |
| !!! | CTGATTTTTTAGTACTAGCA+AGG | - | chr5_4:7258809-7258828 | Msa0834250:intron | 30.0% |
| ATAACTCCTTAAAAAGCTAC+TGG | + | chr5_4:7258946-7258965 | None:intergenic | 30.0% | |
| !! | AGTAGCTTTTTAAGGAGTTA+TGG | - | chr5_4:7258945-7258964 | Msa0834250:intron | 30.0% |
| !! | CTTTTTAAGGAGTTATGGAA+AGG | - | chr5_4:7258950-7258969 | Msa0834250:intron | 30.0% |
| AAGAAGATTACCTGCTTAAA+TGG | + | chr5_4:7259026-7259045 | None:intergenic | 30.0% | |
| ATTTAAGCAGGTAATCTTCT+TGG | - | chr5_4:7259025-7259044 | Msa0834250:intron | 30.0% | |
| TTTAAGCAGGTAATCTTCTT+GGG | - | chr5_4:7259026-7259045 | Msa0834250:intron | 30.0% | |
| ATATGATAGATTATCTTGGC+AGG | - | chr5_4:7259177-7259196 | Msa0834250:intron | 30.0% | |
| TGGACCTATTATTGAACAAA+TGG | - | chr5_4:7259264-7259283 | Msa0834250:intron | 30.0% | |
| !! | TTAACAGGTTAAAAGTGTCA+AGG | + | chr5_4:7259628-7259647 | None:intergenic | 30.0% |
| !! | TCTCAGGTGAAAATTTTAAC+AGG | + | chr5_4:7259643-7259662 | None:intergenic | 30.0% |
| !!! | AATAATGTGATGTTTTGGTC+TGG | - | chr5_4:7259797-7259816 | Msa0834250:CDS | 30.0% |
| TCCAAAATGTATACTCTTTG+AGG | - | chr5_4:7259905-7259924 | Msa0834250:intron | 30.0% | |
| CCAAAATGTATACTCTTTGA+GGG | - | chr5_4:7259906-7259925 | Msa0834250:intron | 30.0% | |
| !!! | ATAGTTTTGGTTCTATTCAC+TGG | - | chr5_4:7260082-7260101 | Msa0834250:intron | 30.0% |
| TATACTTTGCACCAATAACA+TGG | + | chr5_4:7260132-7260151 | None:intergenic | 30.0% | |
| TAAGCCTAATATGCTCTTAA+TGG | - | chr5_4:7260263-7260282 | Msa0834250:CDS | 30.0% | |
| ! | AATTTTGCTAAATGGCCAAT+TGG | + | chr5_4:7260289-7260308 | None:intergenic | 30.0% |
| ! | GAAGCTTCTTTCATGTTTTT+GGG | + | chr5_4:7260474-7260493 | None:intergenic | 30.0% |
| ! | TGAAGCTTCTTTCATGTTTT+TGG | + | chr5_4:7260475-7260494 | None:intergenic | 30.0% |
| ! | TTGCATCTAATACATGCTTT+TGG | - | chr5_4:7260529-7260548 | Msa0834250:intron | 30.0% |
| !! | TTTTGGTAACAGAATGTTCA+GGG | + | chr5_4:7260728-7260747 | None:intergenic | 30.0% |
| CTTTAAGCAATCATCATCAA+AGG | + | chr5_4:7260772-7260791 | None:intergenic | 30.0% | |
| CGGATGTTGTTCATTTCATT+TGG | + | chr5_4:7257598-7257617 | None:intergenic | 35.0% | |
| TGAAACCAGAACACAATCTT+CGG | + | chr5_4:7257618-7257637 | None:intergenic | 35.0% | |
| TTACAGGACATTGAAAGACA+TGG | + | chr5_4:7257720-7257739 | None:intergenic | 35.0% | |
| AGAATATGAATGGCACTTAC+AGG | + | chr5_4:7257736-7257755 | None:intergenic | 35.0% | |
| TTATACTTAGGATCAAGAGC+TGG | + | chr5_4:7258152-7258171 | None:intergenic | 35.0% | |
| GTAACGAATCAATCAGACAA+TGG | + | chr5_4:7258513-7258532 | None:intergenic | 35.0% | |
| !! | TGTCTGATTGATTCGTTACA+TGG | - | chr5_4:7258514-7258533 | Msa0834250:intron | 35.0% |
| !! | TGATTGATTCGTTACATGGA+TGG | - | chr5_4:7258518-7258537 | Msa0834250:intron | 35.0% |
| ATTACACAAGTGATATCCAC+CGG | + | chr5_4:7258559-7258578 | None:intergenic | 35.0% | |
| AGAAGAGGATATCTTAAAGC+TGG | - | chr5_4:7258777-7258796 | Msa0834250:intron | 35.0% | |
| TAAATGATGGCAACAAGCAA+TGG | + | chr5_4:7258992-7259011 | None:intergenic | 35.0% | |
| TTAAGCAGGTAATCTTCTTG+GGG | - | chr5_4:7259027-7259046 | Msa0834250:intron | 35.0% | |
| CTAAGCTGTTTATCCAAACA+TGG | - | chr5_4:7259140-7259159 | Msa0834250:intron | 35.0% | |
| AAACACATTTGCACCATGTT+TGG | + | chr5_4:7259156-7259175 | None:intergenic | 35.0% | |
| ! | TATTTTCACACCTGCATCAA+AGG | + | chr5_4:7259203-7259222 | None:intergenic | 35.0% |
| GATGCAGGTGTGAAAATAAT+TGG | - | chr5_4:7259205-7259224 | Msa0834250:intron | 35.0% | |
| !! | ACAAGTCATTTTGTGACTGA+AGG | - | chr5_4:7259232-7259251 | Msa0834250:intron | 35.0% |
| !!! | ATGTTTTGGTCTGGTTTATG+TGG | - | chr5_4:7259806-7259825 | Msa0834250:CDS | 35.0% |
| !! | CCCTCAAAGAGTATACATTT+TGG | + | chr5_4:7259909-7259928 | None:intergenic | 35.0% |
| AGTATGTTATTGTGCAGCTT+AGG | + | chr5_4:7260010-7260029 | None:intergenic | 35.0% | |
| AGCATATTAGGCTTACAACT+TGG | + | chr5_4:7260258-7260277 | None:intergenic | 35.0% | |
| ! | TTGGCCATTAAGAGCATATT+AGG | + | chr5_4:7260270-7260289 | None:intergenic | 35.0% |
| ATATGCTCTTAATGGCCAAT+TGG | - | chr5_4:7260271-7260290 | Msa0834250:intron | 35.0% | |
| CAATTGTGTCAATGGTAGTT+TGG | + | chr5_4:7260392-7260411 | None:intergenic | 35.0% | |
| GATTATCCATAAAGCCAACT+TGG | + | chr5_4:7260499-7260518 | None:intergenic | 35.0% | |
| !! | GTTTTGGTAACAGAATGTTC+AGG | + | chr5_4:7260729-7260748 | None:intergenic | 35.0% |
| ! | TGTTGAATTTGGCAAGGTTT+TGG | + | chr5_4:7260745-7260764 | None:intergenic | 35.0% |
| ! | TCAAAGGCACATGTTGAATT+TGG | + | chr5_4:7260756-7260775 | None:intergenic | 35.0% |
| AACATCCGAAGATTGTGTTC+TGG | - | chr5_4:7257610-7257629 | Msa0834250:CDS | 40.0% | |
| TCAAGTTCCTTCCTAACTCA+TGG | - | chr5_4:7257691-7257710 | Msa0834250:CDS | 40.0% | |
| ATGGATACCATGAGTTAGGA+AGG | + | chr5_4:7257701-7257720 | None:intergenic | 40.0% | |
| AGACATGGATACCATGAGTT+AGG | + | chr5_4:7257705-7257724 | None:intergenic | 40.0% | |
| TCAGATTGCATTGCCTCAAA+TGG | - | chr5_4:7257866-7257885 | Msa0834250:intron | 40.0% | |
| TGGTGGTAACATTATTGCTG+CGG | - | chr5_4:7257886-7257905 | Msa0834250:intron | 40.0% | |
| TAAATGGCCTCGAATGCAAA+TGG | - | chr5_4:7258067-7258086 | Msa0834250:intron | 40.0% | |
| GTCCTGCAACAATATAGAGA+GGG | + | chr5_4:7258491-7258510 | None:intergenic | 40.0% | |
| AAACGAATCACTTCGCTTTC+TGG | + | chr5_4:7258700-7258719 | None:intergenic | 40.0% | |
| AGTACTAGCAAGGTATACGA+AGG | - | chr5_4:7258819-7258838 | Msa0834250:CDS | 40.0% | |
| ! | TGCTTGTTGCCATCATTTAG+AGG | - | chr5_4:7258993-7259012 | Msa0834250:intron | 40.0% |
| GGATTTCTGCCTCTAAATGA+TGG | + | chr5_4:7259005-7259024 | None:intergenic | 40.0% | |
| AGGCAGAAATCCATTTAAGC+AGG | - | chr5_4:7259013-7259032 | Msa0834250:intron | 40.0% | |
| TAAGCAGGTAATCTTCTTGG+GGG | - | chr5_4:7259028-7259047 | Msa0834250:intron | 40.0% | |
| CTTCGCCATAAGCTATCTTT+AGG | - | chr5_4:7259059-7259078 | Msa0834250:intron | 40.0% | |
| TGAGAAGCAATGTCTGTCAA+TGG | - | chr5_4:7259439-7259458 | Msa0834250:intron | 40.0% | |
| TGTTCTTTGCATCTGTTCTC+AGG | + | chr5_4:7259659-7259678 | None:intergenic | 40.0% | |
| ! | TGGTCTGGTTTATGTGGTTT+CGG | - | chr5_4:7259812-7259831 | Msa0834250:intron | 40.0% |
| TTGAGGGATCCATAGATTCA+AGG | - | chr5_4:7259922-7259941 | Msa0834250:intron | 40.0% | |
| TCCATAGATTCAAGGTGGAA+AGG | - | chr5_4:7259930-7259949 | Msa0834250:intron | 40.0% | |
| CCATAGATTCAAGGTGGAAA+GGG | - | chr5_4:7259931-7259950 | Msa0834250:intron | 40.0% | |
| !! | GTCAATGGTAGTTTGGTGTT+AGG | + | chr5_4:7260385-7260404 | None:intergenic | 40.0% |
| GAAAGAAGCTTCATCCAAGT+TGG | - | chr5_4:7260482-7260501 | Msa0834250:intron | 40.0% | |
| !! | CTTCATCCAAGTTGGCTTTA+TGG | - | chr5_4:7260490-7260509 | Msa0834250:intron | 40.0% |
| !!! | AATACATGCTTTTGGCTTGC+AGG | - | chr5_4:7260537-7260556 | Msa0834250:intron | 40.0% |
| !!! | ATACATGCTTTTGGCTTGCA+GGG | - | chr5_4:7260538-7260557 | Msa0834250:intron | 40.0% |
| TTGCCTAGTATATGCCTCAA+TGG | - | chr5_4:7260681-7260700 | Msa0834250:CDS | 40.0% | |
| CTTCTAATGCTGCAATCAGA+AGG | + | chr5_4:7260801-7260820 | None:intergenic | 40.0% | |
| GATTGCATTGCCTCAAATGG+TGG | - | chr5_4:7257869-7257888 | Msa0834250:intron | 45.0% | |
| TCCTCTTCCATTTGCATTCG+AGG | + | chr5_4:7258077-7258096 | None:intergenic | 45.0% | |
| TGCTGTTCTTGCATCAAACC+AGG | - | chr5_4:7258175-7258194 | Msa0834250:intron | 45.0% | |
| TGCCCTCTCTATATTGTTGC+AGG | - | chr5_4:7258486-7258505 | Msa0834250:intron | 45.0% | |
| GGTCCTGCAACAATATAGAG+AGG | + | chr5_4:7258492-7258511 | None:intergenic | 45.0% | |
| TGATTCGTTACATGGATGGC+AGG | - | chr5_4:7258522-7258541 | Msa0834250:intron | 45.0% | |
| TAATCTTCTTGGGGGATGAG+AGG | - | chr5_4:7259036-7259055 | Msa0834250:intron | 45.0% | |
| ! | GCTACAACCTTTTCAACTGC+AGG | - | chr5_4:7259358-7259377 | Msa0834250:intron | 45.0% |
| CTCTCAACCTGCAGTTGAAA+AGG | + | chr5_4:7259368-7259387 | None:intergenic | 45.0% | |
| ! | GCAGAGCTTTGTGCAGAAAT+CGG | - | chr5_4:7259409-7259428 | Msa0834250:intron | 45.0% |
| AGGGATCCATAGATTCAAGG+TGG | - | chr5_4:7259925-7259944 | Msa0834250:intron | 45.0% | |
| CCCTTTCCACCTTGAATCTA+TGG | + | chr5_4:7259934-7259953 | None:intergenic | 45.0% | |
| TTCAAGGTGGAAAGGGAAAG+AGG | - | chr5_4:7259938-7259957 | Msa0834250:intron | 45.0% | |
| GGAAAGGGAAAGAGGAAAAC+AGG | - | chr5_4:7259946-7259965 | Msa0834250:intron | 45.0% | |
| ! | ATCTGGTTTGCCACCTTTAC+TGG | - | chr5_4:7260187-7260206 | Msa0834250:CDS | 45.0% |
| CAAAAGAGAGCCTTGCAGTT+GGG | + | chr5_4:7260223-7260242 | None:intergenic | 45.0% | |
| !!! | TACATGCTTTTGGCTTGCAG+GGG | - | chr5_4:7260539-7260558 | Msa0834250:intron | 45.0% |
| ! | TTGCAGGGGTACAACTCAAA+AGG | - | chr5_4:7260553-7260572 | Msa0834250:intron | 45.0% |
| ! | AGGGGTACAACTCAAAAGGA+TGG | - | chr5_4:7260557-7260576 | Msa0834250:intron | 45.0% |
| TGGCCATTGAGGCATATACT+AGG | + | chr5_4:7260687-7260706 | None:intergenic | 45.0% | |
| ACAGAATGTTCAGGGCCAAA+GGG | + | chr5_4:7260720-7260739 | None:intergenic | 45.0% | |
| AACAGAATGTTCAGGGCCAA+AGG | + | chr5_4:7260721-7260740 | None:intergenic | 45.0% | |
| GGCACATGTTGAATTTGGCA+AGG | + | chr5_4:7260751-7260770 | None:intergenic | 45.0% | |
| CAGCATTAGAAGCTGTCTTG+AGG | - | chr5_4:7260809-7260828 | Msa0834250:five_prime_UTR | 45.0% | |
| GCCTCGAATGCAAATGGAAG+AGG | - | chr5_4:7258073-7258092 | Msa0834250:intron | 50.0% | |
| TCGTTACATGGATGGCAGGA+TGG | - | chr5_4:7258526-7258545 | Msa0834250:intron | 50.0% | |
| ATGGCAGGATGGAAGACTTC+CGG | - | chr5_4:7258537-7258556 | Msa0834250:intron | 50.0% | |
| CGCTTTCTGGACCTCTATCA+TGG | + | chr5_4:7258687-7258706 | None:intergenic | 50.0% | |
| AGGGGAAACTCCAGTAAAGG+TGG | + | chr5_4:7260200-7260219 | None:intergenic | 50.0% | |
| GCAAAAGAGAGCCTTGCAGT+TGG | + | chr5_4:7260224-7260243 | None:intergenic | 50.0% | |
| CAAAAGGATGGTAGCAGCAC+AGG | - | chr5_4:7260569-7260588 | Msa0834250:intron | 50.0% | |
| TGTGAAAGCCGATGTGATGC+AGG | - | chr5_4:7260633-7260652 | Msa0834250:CDS | 50.0% | |
| CGCAAACTCCTGCATCACAT+CGG | + | chr5_4:7260644-7260663 | None:intergenic | 50.0% | |
| GGCATATACTAGGCAACTCG+AGG | + | chr5_4:7260677-7260696 | None:intergenic | 50.0% | |
| GACATGCACATTGGCCATTG+AGG | + | chr5_4:7260698-7260717 | None:intergenic | 50.0% | |
| ! | CAGTGTCACTGTGGATGTCA+TGG | - | chr5_4:7260834-7260853 | Msa0834250:five_prime_UTR | 50.0% |
| TCTTGGCAGGCCTTTGATGC+AGG | - | chr5_4:7259190-7259209 | Msa0834250:intron | 55.0% | |
| GTGACTGAAGGACGTGATGC+TGG | - | chr5_4:7259244-7259263 | Msa0834250:intron | 55.0% | |
| GGGAGGGGAAACTCCAGTAA+AGG | + | chr5_4:7260203-7260222 | None:intergenic | 55.0% | |
| AGTTTCCCCTCCCAACTGCA+AGG | - | chr5_4:7260210-7260229 | Msa0834250:CDS | 55.0% | |
| AGAGAGCCTTGCAGTTGGGA+GGG | + | chr5_4:7260219-7260238 | None:intergenic | 55.0% | |
| AAGAGAGCCTTGCAGTTGGG+AGG | + | chr5_4:7260220-7260239 | None:intergenic | 55.0% | |
| GGCCAATGTGCATGTCCCTT+TGG | - | chr5_4:7260702-7260721 | Msa0834250:CDS | 55.0% | |
| GGCCAAAGGGACATGCACAT+TGG | + | chr5_4:7260707-7260726 | None:intergenic | 55.0% | |
| ! | CTTGAGGCTCAGTGTCACTG+TGG | - | chr5_4:7260825-7260844 | Msa0834250:five_prime_UTR | 55.0% |
| GCAGGATGGAAGACTTCCGG+TGG | - | chr5_4:7258540-7258559 | Msa0834250:intron | 60.0% | |
| GAGAGCCTTGCAGTTGGGAG+GGG | + | chr5_4:7260218-7260237 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 7257473 | 7260860 | 7257473 | ID=Msa0834250;Name=Msa0834250 |
| chr5_4 | mRNA | 7257473 | 7260860 | 7257473 | ID=Msa0834250-mRNA-1;Parent=Msa0834250;Name=Msa0834250-mRNA-1;_AED=0.23;_eAED=0.23;_QI=65|0.57|0.62|1|0.71|0.75|8|0|380 |
| chr5_4 | exon | 7257473 | 7257774 | 7257473 | ID=Msa0834250-mRNA-1:exon:3239;Parent=Msa0834250-mRNA-1 |
| chr5_4 | exon | 7258638 | 7258644 | 7258638 | ID=Msa0834250-mRNA-1:exon:3238;Parent=Msa0834250-mRNA-1 |
| chr5_4 | exon | 7258816 | 7258953 | 7258816 | ID=Msa0834250-mRNA-1:exon:3237;Parent=Msa0834250-mRNA-1 |
| chr5_4 | exon | 7259493 | 7259652 | 7259493 | ID=Msa0834250-mRNA-1:exon:3236;Parent=Msa0834250-mRNA-1 |
| chr5_4 | exon | 7259752 | 7259825 | 7259752 | ID=Msa0834250-mRNA-1:exon:3235;Parent=Msa0834250-mRNA-1 |
| chr5_4 | exon | 7260137 | 7260287 | 7260137 | ID=Msa0834250-mRNA-1:exon:3234;Parent=Msa0834250-mRNA-1 |
| chr5_4 | exon | 7260382 | 7260494 | 7260382 | ID=Msa0834250-mRNA-1:exon:3233;Parent=Msa0834250-mRNA-1 |
| chr5_4 | exon | 7260598 | 7260860 | 7260598 | ID=Msa0834250-mRNA-1:exon:3232;Parent=Msa0834250-mRNA-1 |
| chr5_4 | five_prime_UTR | 7260796 | 7260860 | 7260796 | ID=Msa0834250-mRNA-1:five_prime_utr;Parent=Msa0834250-mRNA-1 |
| chr5_4 | CDS | 7260598 | 7260795 | 7260598 | ID=Msa0834250-mRNA-1:cds;Parent=Msa0834250-mRNA-1 |
| chr5_4 | CDS | 7260382 | 7260494 | 7260382 | ID=Msa0834250-mRNA-1:cds;Parent=Msa0834250-mRNA-1 |
| chr5_4 | CDS | 7260137 | 7260287 | 7260137 | ID=Msa0834250-mRNA-1:cds;Parent=Msa0834250-mRNA-1 |
| chr5_4 | CDS | 7259752 | 7259825 | 7259752 | ID=Msa0834250-mRNA-1:cds;Parent=Msa0834250-mRNA-1 |
| chr5_4 | CDS | 7259493 | 7259652 | 7259493 | ID=Msa0834250-mRNA-1:cds;Parent=Msa0834250-mRNA-1 |
| chr5_4 | CDS | 7258816 | 7258953 | 7258816 | ID=Msa0834250-mRNA-1:cds;Parent=Msa0834250-mRNA-1 |
| chr5_4 | CDS | 7258638 | 7258644 | 7258638 | ID=Msa0834250-mRNA-1:cds;Parent=Msa0834250-mRNA-1 |
| chr5_4 | CDS | 7257473 | 7257774 | 7257473 | ID=Msa0834250-mRNA-1:cds;Parent=Msa0834250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
