AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0255100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0255100 MtrunA17_Chr2g0315761 97.066 409 9 2 1 408 1 407 0.0 811
Msa0255100 MtrunA17_Chr3g0114521 53.388 369 170 2 30 396 21 389 4.25e-140 405
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0255100 AT3G14930.2 76.440 382 88 1 23 404 28 407 0.0 615
Msa0255100 AT3G14930.1 76.440 382 88 1 23 404 28 407 0.0 615
Msa0255100 AT3G14930.3 80.606 330 64 0 75 404 1 330 0.0 569
Msa0255100 AT2G40490.1 52.975 353 165 1 45 396 42 394 2.95e-137 398

Find 135 sgRNAs with CRISPR-Local

Find 478 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGAAGATATGGGTAATTT+TGG 0.116657 2_2:+48702537 Msa0255100:five_prime_UTR
CTGGTAGTTCAAGCCATTTC+TGG 0.205344 2_2:+48708827 Msa0255100:three_prime_UTR
GAACTTCCAGATTGTAGATT+TGG 0.248585 2_2:+48707646 Msa0255100:intron
ACGCTCTGAGGAGGGATTAA+AGG 0.251035 2_2:+48705814 Msa0255100:CDS
TAGTTTACCTCTTTGATATA+AGG 0.260796 2_2:-48706262 None:intergenic
GACACTGGAGTTGATGTAAT+TGG 0.268094 2_2:+48707743 Msa0255100:CDS
GTTCTATTATACAGTGGTTT+AGG 0.268295 2_2:+48702775 Msa0255100:intron
TACCCATATCTTCATCTTAG+TGG 0.293666 2_2:-48702530 None:intergenic
GTGCATGATAAATTAATTAG+AGG 0.300072 2_2:+48708978 Msa0255100:three_prime_UTR
AGAAAGAAGGTTGAAGCAAT+TGG 0.311062 2_2:-48702827 None:intergenic
GTGAGAGTGAGAGAGGGTTT+TGG 0.312464 2_2:-48702862 None:intergenic
ATTACTATCAGATCCTCTTT+TGG 0.323417 2_2:+48705511 Msa0255100:intron
GAACACCATGCCCAAGATTA+AGG 0.327102 2_2:-48708661 None:intergenic
GTATTGTTTCCATGAGTAAT+TGG 0.331153 2_2:-48702663 None:intergenic
ACCTCTGAATTTCTTCTGTT+AGG 0.334578 2_2:-48707871 None:intergenic
TTCGACAAGCTTAGATTTGT+AGG 0.338646 2_2:+48705854 Msa0255100:CDS
CCACTTGTTCTTTATATCAA+TGG 0.355349 2_2:+48707692 Msa0255100:CDS
GGCTATTGGTAGCAGTTTAG+AGG 0.358125 2_2:+48702565 Msa0255100:five_prime_UTR
AGCCATTTCTGGAAGAGTTC+AGG 0.359288 2_2:+48708838 Msa0255100:three_prime_UTR
AATCCACTAAGATGAAGATA+TGG 0.359396 2_2:+48702527 Msa0255100:five_prime_UTR
TAGAAATTTCTTTGCAGCCT+TGG 0.361660 2_2:+48705675 Msa0255100:CDS
TGTATGGCACATGCTCTTAA+TGG 0.364408 2_2:-48706086 None:intergenic
CTTGGGCATGGTGTTCTTGT+TGG 0.374900 2_2:+48708668 Msa0255100:CDS
ACTCGACTGGACAGTGGATA+TGG 0.377098 2_2:+48707766 Msa0255100:CDS
TAAAGAACAAGTGGTGTGTC+TGG 0.380680 2_2:-48707683 None:intergenic
GTTCTTTATATCAATGGAAA+TGG 0.383329 2_2:+48707698 Msa0255100:CDS
TTCAGGGTTGTGAGGTCTGC+AGG 0.389800 2_2:+48708623 Msa0255100:intron
CCTCTGAATTTCTTCTGTTA+GGG 0.395997 2_2:-48707870 None:intergenic
AGACAACACATCCTTAATCT+TGG 0.400361 2_2:+48708650 Msa0255100:CDS
AACCTGAACTCTTCCAGAAA+TGG 0.413215 2_2:-48708840 None:intergenic
CTTACACCTCTACCTGCGTT+CGG 0.413940 2_2:+48705740 Msa0255100:CDS
TTATTGTTTATTTAGGTTGG+TGG 0.415822 2_2:+48705977 Msa0255100:intron
CATGCCGGAGGACGACTAAC+AGG 0.416043 2_2:-48705554 None:intergenic
GAGAAAATAATTACTCCATC+AGG 0.416476 2_2:-48705710 None:intergenic
CCTGTTGTACTTACTTTGCC+TGG 0.417206 2_2:+48708808 Msa0255100:three_prime_UTR
CTAAGCTTGTCGAAGTCAAT+CGG 0.423001 2_2:-48705845 None:intergenic
CGTATCGGTGACTGTATAAC+AGG 0.424760 2_2:-48705794 None:intergenic
TTACACCTCTACCTGCGTTC+GGG 0.433960 2_2:+48705741 Msa0255100:CDS
TTAGTATGTGTGGTGTTGTA+TGG 0.439001 2_2:-48706102 None:intergenic
CAATACCTACTTCCATCAAC+AGG 0.440396 2_2:+48702680 Msa0255100:CDS
AGAGAAGGAAAACCTGTTGA+TGG 0.442318 2_2:-48702692 None:intergenic
AAATGCGCTACAGCTTCTTC+CGG 0.449749 2_2:-48708695 None:intergenic
CCAGGCAAAGTAAGTACAAC+AGG 0.456358 2_2:-48708808 None:intergenic
GTTTGAAAGGAGAAGAAAGA+AGG 0.460520 2_2:-48702840 None:intergenic
TCTTCTGTTAGGGCAGTAAG+AGG 0.462239 2_2:-48707860 None:intergenic
AGAAGATTAGGTAGTGGGAT+TGG 0.463579 2_2:+48707800 Msa0255100:CDS
GCTGATGGGAGAAGAAGATT+AGG 0.465293 2_2:+48707788 Msa0255100:CDS
GGGAGAAGAAGATTAGGTAG+TGG 0.465633 2_2:+48707794 Msa0255100:CDS
GACAACACATCCTTAATCTT+GGG 0.466437 2_2:+48708651 Msa0255100:CDS
TCTGCCGCCTCATCTTCTAA+TGG 0.467553 2_2:+48702904 Msa0255100:CDS
GACCAGAGTTCCCACATATG+AGG 0.470428 2_2:-48706235 None:intergenic
AAACTTGGTGAGAGTGAGAG+AGG 0.470788 2_2:-48702869 None:intergenic
CATACAAATATTTGACTCAT+GGG 0.474073 2_2:+48706198 Msa0255100:CDS
GGAGAAGAAGATTAGGTAGT+GGG 0.474638 2_2:+48707795 Msa0255100:CDS
TGTGGGAGCACCTTGGACAT+TGG 0.478006 2_2:+48706021 Msa0255100:CDS
CTCGCAGCCTTAACCAAAAG+AGG 0.480396 2_2:-48705524 None:intergenic
CTCATCACTCCAATTACTCA+TGG 0.481187 2_2:+48702654 Msa0255100:exon
GACATTGGCAACGTATATAG+TGG 0.481356 2_2:+48706036 Msa0255100:CDS
AGAGGAGAGAATAAAGAAGC+AGG 0.483840 2_2:-48707842 None:intergenic
ATACAACACCACACATACTA+AGG 0.484227 2_2:+48706104 Msa0255100:CDS
GGCAACGTATATAGTGGAAG+GGG 0.484531 2_2:+48706042 Msa0255100:CDS
GCATACAAATATTTGACTCA+TGG 0.496137 2_2:+48706197 Msa0255100:CDS
GACAACTGCCACCTCATATG+TGG 0.496273 2_2:+48706224 Msa0255100:CDS
CGCATTTCTTTGACGTCGCG+AGG 0.499359 2_2:+48708711 Msa0255100:CDS
CAGTCGTCTCTGACCTCTCT+CGG 0.502489 2_2:-48705643 None:intergenic
CGAACGCAGGTAGAGGTGTA+AGG 0.504596 2_2:-48705739 None:intergenic
CACCTCATATGTGGGAACTC+TGG 0.508382 2_2:+48706233 Msa0255100:CDS
TCTGACCTCTCTCGGAAGGA+TGG 0.513347 2_2:-48705635 None:intergenic
CAGAAATGGCTTGAACTACC+AGG 0.513418 2_2:-48708826 None:intergenic
GCATGGATGATGCGCCAAGC+AGG 0.516013 2_2:+48705572 Msa0255100:CDS
TATTATACAGTGGTTTAGGA+TGG 0.516663 2_2:+48702779 Msa0255100:intron
CTGTTAGTCGTCCTCCGGCA+TGG 0.518001 2_2:+48705555 Msa0255100:CDS
CTGTCACTTTCAGGGTTGTG+AGG 0.519796 2_2:+48708615 Msa0255100:intron
ATTATACTCAAACAAATGGA+AGG 0.527965 2_2:-48709004 None:intergenic
TCGATCCCGAACGCAGGTAG+AGG 0.533836 2_2:-48705746 None:intergenic
TCTGCTTTCTCATTTGTCAA+AGG 0.534509 2_2:+48706129 Msa0255100:CDS
TAAGCTTGTCGAAGTCAATC+GGG 0.538660 2_2:-48705844 None:intergenic
TAGCCATGTACCTTCCTGCT+TGG 0.546091 2_2:-48705586 None:intergenic
TTGACTTGTTCTGATGAAGT+TGG 0.547484 2_2:+48709058 Msa0255100:three_prime_UTR
AGATCCTGTTAGTCGTCCTC+CGG 0.548024 2_2:+48705550 Msa0255100:CDS
CGATTTGTACATTGCTATGT+CGG 0.548513 2_2:+48708912 Msa0255100:three_prime_UTR
AGATTAAGGATGTGTTGTCT+AGG 0.548882 2_2:-48708647 None:intergenic
ATCCACTAAGATGAAGATAT+GGG 0.549565 2_2:+48702528 Msa0255100:five_prime_UTR
AGAGCAAGTGAGAGTAAACT+TGG 0.554435 2_2:-48702884 None:intergenic
CTTTATATCAATGGAAATGG+TGG 0.557209 2_2:+48707701 Msa0255100:CDS
AACTTGGTGAGAGTGAGAGA+GGG 0.562584 2_2:-48702868 None:intergenic
GCTTGGCGCATCATCCATGC+CGG 0.565380 2_2:-48705569 None:intergenic
AAAGAACAAGTGGTGTGTCT+GGG 0.567198 2_2:-48707682 None:intergenic
CGTCTCTGACCTCTCTCGGA+AGG 0.569014 2_2:-48705639 None:intergenic
GAAAACCTGTTGATGGAAGT+AGG 0.570172 2_2:-48702685 None:intergenic
CTTTGACATAGAAGATGTGA+GGG 0.572515 2_2:+48705769 Msa0255100:CDS
GCGCCAAGCAGGAAGGTACA+TGG 0.572903 2_2:+48705583 Msa0255100:CDS
TTGATGTAATTGGACTCGAC+TGG 0.576021 2_2:+48707753 Msa0255100:CDS
AACATCCATCCTTCCGAGAG+AGG 0.577108 2_2:+48705630 Msa0255100:CDS
AATCCCTCCTCAGAGCGTAT+CGG 0.581435 2_2:-48705809 None:intergenic
GGTAGTGGGATTGGTGTGCA+AGG 0.583292 2_2:+48707809 Msa0255100:CDS
TTGGCAACGTATATAGTGGA+AGG 0.583350 2_2:+48706040 Msa0255100:CDS
AGCAGAGTCCTTAGTATGTG+TGG 0.585181 2_2:-48706112 None:intergenic
GCAATTGGATTGTTGAAACA+AGG 0.587778 2_2:-48702812 None:intergenic
CAAATATTTGACTCATGGGG+TGG 0.589836 2_2:+48706202 Msa0255100:CDS
ACTTAAGATCCTGCGGCAAG+AGG 0.593099 2_2:+48705883 Msa0255100:CDS
GAGGAGAGAATAAAGAAGCA+GGG 0.594985 2_2:-48707841 None:intergenic
GTCAAAACCTTATATCAAAG+AGG 0.596608 2_2:+48706255 Msa0255100:CDS
TCAAAGTCGATCCCGAACGC+AGG 0.597771 2_2:-48705752 None:intergenic
CACATCCTTAATCTTGGGCA+TGG 0.600175 2_2:+48708656 Msa0255100:CDS
ATATACGTTGCCAATGTCCA+AGG 0.600785 2_2:-48706031 None:intergenic
TGGTGTTCTTGTTGGCACAC+CGG 0.601899 2_2:+48708676 Msa0255100:CDS
TGGCAACGTATATAGTGGAA+GGG 0.603156 2_2:+48706041 Msa0255100:CDS
GGAAGTACCATTAGAAGATG+AGG 0.606317 2_2:-48702911 None:intergenic
TGGACAGTGGATATGGCTGA+TGG 0.608612 2_2:+48707773 Msa0255100:CDS
TCACCGATACGCTCTGAGGA+GGG 0.608994 2_2:+48705806 Msa0255100:CDS
ACAACTGCCACCTCATATGT+GGG 0.615316 2_2:+48706225 Msa0255100:CDS
GTCACCGATACGCTCTGAGG+AGG 0.616864 2_2:+48705805 Msa0255100:CDS
ACTTTGACATAGAAGATGTG+AGG 0.620333 2_2:+48705768 Msa0255100:CDS
CCATTGATATAAAGAACAAG+TGG 0.622098 2_2:-48707692 None:intergenic
TGTCTATCATACGCTCGAGA+AGG 0.625970 2_2:-48707724 None:intergenic
TGGCGCATCATCCATGCCGG+AGG 0.630576 2_2:-48705566 None:intergenic
TCAGGCCTAAAAGCTTTCCA+AGG 0.632316 2_2:-48705692 None:intergenic
CTCGAGCGTATGATAGACAC+TGG 0.632830 2_2:+48707728 Msa0255100:CDS
AGTGAGCCCCAGATTCCACT+TGG 0.635817 2_2:-48706174 None:intergenic
GGATGATGCGCCAAGCAGGA+AGG 0.641154 2_2:+48705576 Msa0255100:CDS
GCTATGTCGGCGAATAGATG+AGG 0.642769 2_2:+48708925 Msa0255100:three_prime_UTR
TCCCACAAAACCTAAAACAG+CGG 0.645378 2_2:-48706005 None:intergenic
GATTGGTGTGCAAGGAAACG+TGG 0.647936 2_2:+48707817 Msa0255100:CDS
CCCTAACAGAAGAAATTCAG+AGG 0.651466 2_2:+48707870 Msa0255100:CDS
CAGAGTTCCCACATATGAGG+TGG 0.652631 2_2:-48706232 None:intergenic
GGACAGTGGATATGGCTGAT+GGG 0.655922 2_2:+48707774 Msa0255100:CDS
ATACAAATATTTGACTCATG+GGG 0.664818 2_2:+48706199 Msa0255100:CDS
GAGAATCACTTAAGATCCTG+CGG 0.672224 2_2:+48705876 Msa0255100:CDS
GGCAAAGTAAGTACAACAGG+TGG 0.674865 2_2:-48708805 None:intergenic
AATTGGACTCGACTGGACAG+TGG 0.685653 2_2:+48707760 Msa0255100:CDS
AGTACCATTAGAAGATGAGG+CGG 0.689225 2_2:-48702908 None:intergenic
ACAGTCACCGATACGCTCTG+AGG 0.696424 2_2:+48705802 Msa0255100:CDS
GCAACGTATATAGTGGAAGG+GGG 0.725564 2_2:+48706043 Msa0255100:CDS
TTTGACATAGAAGATGTGAG+GGG 0.768540 2_2:+48705770 Msa0255100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATTAAATTTTAATTAA+GGG - chr2_2:48704880-48704899 None:intergenic 0.0%
!!! AATAAATTAAATTTTAATTA+AGG - chr2_2:48704881-48704900 None:intergenic 0.0%
!!! AATTAAAATTTAATTTATTT+TGG + chr2_2:48704882-48704901 Msa0255100:intron 0.0%
!! AACAAAAAATAATTTATTAG+TGG + chr2_2:48703779-48703798 Msa0255100:intron 10.0%
!!! TAATTTTTCTATTTAAATCA+AGG + chr2_2:48704510-48704529 Msa0255100:intron 10.0%
!!! AGTTTTAATTCAAAAATATT+AGG - chr2_2:48705072-48705091 None:intergenic 10.0%
!!! TATTTTTGAATTAAAACTAA+CGG + chr2_2:48705074-48705093 Msa0255100:intron 10.0%
!!! AATTAAAATTCGATTTATTT+TGG - chr2_2:48705137-48705156 None:intergenic 10.0%
!!! AATAAATCGAATTTTAATTA+AGG + chr2_2:48705138-48705157 Msa0255100:intron 10.0%
!!! ATAAATCGAATTTTAATTAA+GGG + chr2_2:48705139-48705158 Msa0255100:intron 10.0%
!! TTAATTTCAATATTATGAAT+TGG + chr2_2:48708398-48708417 Msa0255100:intron 10.0%
!! TAATTTCAATATTATGAATT+GGG + chr2_2:48708399-48708418 Msa0255100:intron 10.0%
!! AATTATTAGTTAATAGTGAT+GGG - chr2_2:48703177-48703196 None:intergenic 15.0%
!! AAATTATTAGTTAATAGTGA+TGG - chr2_2:48703178-48703197 None:intergenic 15.0%
!! ATCACTATTAACTAATAATT+TGG + chr2_2:48703177-48703196 Msa0255100:intron 15.0%
!! TCACTATTAACTAATAATTT+GGG + chr2_2:48703178-48703197 Msa0255100:intron 15.0%
!! TCTTCTATATATTATGATAA+AGG + chr2_2:48704263-48704282 Msa0255100:intron 15.0%
!! CTTCTATATATTATGATAAA+GGG + chr2_2:48704264-48704283 Msa0255100:intron 15.0%
!!! TTTACATTGTTTTAAAACAA+AGG + chr2_2:48704433-48704452 Msa0255100:intron 15.0%
!!! CAAATGATTAACTTAATTTT+TGG + chr2_2:48704497-48704516 Msa0255100:intron 15.0%
!! CCTAAATAGTTAAAAAAAAA+GGG - chr2_2:48704842-48704861 None:intergenic 15.0%
!! ACCTAAATAGTTAAAAAAAA+AGG - chr2_2:48704843-48704862 None:intergenic 15.0%
!! AAATAGAAAACAAAAGAAAT+TGG + chr2_2:48706927-48706946 Msa0255100:intron 15.0%
!! AATAGAAAACAAAAGAAATT+GGG + chr2_2:48706928-48706947 Msa0255100:intron 15.0%
!!! ATAATACATTTTGGAAATTT+GGG + chr2_2:48707111-48707130 Msa0255100:intron 15.0%
!! AATTAATTAAACCATTACAT+TGG - chr2_2:48707362-48707381 None:intergenic 15.0%
!!! TGTAATGGTTTAATTAATTT+TGG + chr2_2:48707363-48707382 Msa0255100:intron 15.0%
!! TATAATAAATAGCAAATTCT+AGG + chr2_2:48707568-48707587 Msa0255100:intron 15.0%
!!! TTTTATTATACTCAAACAAA+TGG - chr2_2:48709011-48709030 None:intergenic 15.0%
!! AAAAAAAAAAACTGAGAGAA+TGG - chr2_2:48702935-48702954 None:intergenic 20.0%
!! TAAAAAATGTTATCATGACA+TGG - chr2_2:48703036-48703055 None:intergenic 20.0%
!! ATTATTAGTTAATAGTGATG+GGG - chr2_2:48703176-48703195 None:intergenic 20.0%
!! CACTATTAACTAATAATTTG+GGG + chr2_2:48703179-48703198 Msa0255100:intron 20.0%
!!! ATTTATTAGTGGCAATTTTT+TGG + chr2_2:48703790-48703809 Msa0255100:intron 20.0%
!!! TTTATTAGTGGCAATTTTTT+GGG + chr2_2:48703791-48703810 Msa0255100:intron 20.0%
!! TTGAAAAGATTTAGATATTG+TGG + chr2_2:48703900-48703919 Msa0255100:intron 20.0%
!! TTCAAAAAAGGTTCAATAAT+TGG - chr2_2:48703974-48703993 None:intergenic 20.0%
!!! AATTATTGAACCTTTTTTGA+AGG + chr2_2:48703973-48703992 Msa0255100:intron 20.0%
!!! ACTTTTTTAGGTTATAATGA+AGG + chr2_2:48704005-48704024 Msa0255100:intron 20.0%
!!! CCCTTTTTTTTTAACTATTT+AGG + chr2_2:48704839-48704858 Msa0255100:intron 20.0%
!!! CGTTTTTGAATTAAAACTAA+CGG - chr2_2:48704945-48704964 None:intergenic 20.0%
!!! AGTTTTAATTCAAAAACGTT+AGG + chr2_2:48704947-48704966 Msa0255100:intron 20.0%
!!! ATTTTCTTATGGAATTTTTC+TGG + chr2_2:48704978-48704997 Msa0255100:intron 20.0%
!! ATGATATGAATATGAAAAAG+AGG + chr2_2:48705028-48705047 Msa0255100:intron 20.0%
!! AAATAAACAATAAGTAGTGA+GGG - chr2_2:48705970-48705989 None:intergenic 20.0%
!! TAAATAAACAATAAGTAGTG+AGG - chr2_2:48705971-48705990 None:intergenic 20.0%
!! TCACTACTTATTGTTTATTT+AGG + chr2_2:48705970-48705989 Msa0255100:intron 20.0%
!! TACTTATTGTTTATTTAGGT+TGG + chr2_2:48705974-48705993 Msa0255100:intron 20.0%
!!! AACCTAAAACAATTTTATCA+GGG - chr2_2:48706312-48706331 None:intergenic 20.0%
!!! AAACCTAAAACAATTTTATC+AGG - chr2_2:48706313-48706332 None:intergenic 20.0%
!! CAAATTCACACATATTATAT+TGG - chr2_2:48707016-48707035 None:intergenic 20.0%
!!! TCAACAATGATAATACATTT+TGG + chr2_2:48707102-48707121 Msa0255100:intron 20.0%
!!! GATAATACATTTTGGAAATT+TGG + chr2_2:48707110-48707129 Msa0255100:intron 20.0%
!! ACTAAATTAAAAGGATGATA+CGG - chr2_2:48707187-48707206 None:intergenic 20.0%
!! TTACCATGTACTAAATTAAA+AGG - chr2_2:48707196-48707215 None:intergenic 20.0%
!! ACAATAATCGAGTTTAATAA+CGG + chr2_2:48707287-48707306 Msa0255100:intron 20.0%
!!! TGGTTTAATTAATTTTGGTT+CGG + chr2_2:48707368-48707387 Msa0255100:intron 20.0%
!! ATGAGTTAACATAATAGTTA+GGG - chr2_2:48707420-48707439 None:intergenic 20.0%
!! AAATGAGAAAACGAATAAAT+TGG - chr2_2:48707609-48707628 None:intergenic 20.0%
!! TACAAATTGTGTTTAAATAG+TGG - chr2_2:48708059-48708078 None:intergenic 20.0%
!! ATGAAGATATGGGTAATTTT+GGG + chr2_2:48702538-48702557 Msa0255100:five_prime_UTR 25.0%
! AGTGATGAGAGAAATTTATT+TGG - chr2_2:48702643-48702662 None:intergenic 25.0%
!! GAATTTGTTCTATTATACAG+TGG + chr2_2:48702769-48702788 Msa0255100:intron 25.0%
! AAAAGCTCTTATACATGATT+AGG - chr2_2:48703146-48703165 None:intergenic 25.0%
!!! CATATATTTTGGGATATAAG+TGG + chr2_2:48703296-48703315 Msa0255100:intron 25.0%
! TGATACTACATATGTAAATC+TGG - chr2_2:48703401-48703420 None:intergenic 25.0%
!!! GTTTTAAATTTCGATTGAGT+CGG - chr2_2:48703663-48703682 None:intergenic 25.0%
!!! TGGTTTTAGTTGTTGAAATT+TGG + chr2_2:48703756-48703775 Msa0255100:intron 25.0%
!!! TTATTAGTGGCAATTTTTTG+GGG + chr2_2:48703792-48703811 Msa0255100:intron 25.0%
!!! TGGTTATTTTGCTATGTTAT+TGG + chr2_2:48703831-48703850 Msa0255100:intron 25.0%
! TATGTTATTGGATAACTATG+TGG + chr2_2:48703843-48703862 Msa0255100:intron 25.0%
! TGATAATCAACCTTCAAAAA+AGG - chr2_2:48703986-48704005 None:intergenic 25.0%
!!! AGGTTGATTATCACTTTTTT+AGG + chr2_2:48703993-48704012 Msa0255100:intron 25.0%
! AGATCCAATAAATATGAGTA+AGG + chr2_2:48704234-48704253 Msa0255100:intron 25.0%
! GATCCAATAAATATGAGTAA+GGG + chr2_2:48704235-48704254 Msa0255100:intron 25.0%
! ATCCAATAAATATGAGTAAG+GGG + chr2_2:48704236-48704255 Msa0255100:intron 25.0%
! AAAAAGTGACAAAAAGATGA+GGG - chr2_2:48704298-48704317 None:intergenic 25.0%
! TAAAAAGTGACAAAAAGATG+AGG - chr2_2:48704299-48704318 None:intergenic 25.0%
!!! TGTCACTTTTTACTCTTTAA+TGG + chr2_2:48704307-48704326 Msa0255100:intron 25.0%
! GTAAATGTGTAACAGATTTA+TGG + chr2_2:48704377-48704396 Msa0255100:intron 25.0%
!!! TTTTGGCTAAATTGCATTTT+TGG + chr2_2:48704630-48704649 Msa0255100:intron 25.0%
! AAGGTTACCTAAATAGTTAA+GGG - chr2_2:48704657-48704676 None:intergenic 25.0%
!! AGGTTTTCTTCATTTTCTTA+TGG + chr2_2:48704967-48704986 Msa0255100:intron 25.0%
! TTGAATTAAAACTAACGGAA+AGG + chr2_2:48705079-48705098 Msa0255100:intron 25.0%
! GATACTACCTAAATAGTTAA+GGG + chr2_2:48705170-48705189 Msa0255100:intron 25.0%
!! TTAAGGCTAAATTGCATTTT+TGG - chr2_2:48705197-48705216 None:intergenic 25.0%
!! CCTTAATTTTTCTACAAACT+CGG + chr2_2:48705211-48705230 Msa0255100:intron 25.0%
!! CAATTTAAAACCATGATCTT+AGG - chr2_2:48705288-48705307 None:intergenic 25.0%
!!! AAGATCATGGTTTTAAATTG+CGG + chr2_2:48705288-48705307 Msa0255100:intron 25.0%
! AAAGATAGCCATGATATAAA+AGG - chr2_2:48705935-48705954 None:intergenic 25.0%
!!! TTATTGTTTATTTAGGTTGG+TGG + chr2_2:48705977-48705996 Msa0255100:intron 25.0%
! CATACAAATATTTGACTCAT+GGG + chr2_2:48706198-48706217 Msa0255100:CDS 25.0%
! ATACAAATATTTGACTCATG+GGG + chr2_2:48706199-48706218 Msa0255100:CDS 25.0%
! TAGTTTACCTCTTTGATATA+AGG - chr2_2:48706265-48706284 None:intergenic 25.0%
! TATATCAAAGAGGTAAACTA+AGG + chr2_2:48706265-48706284 Msa0255100:intron 25.0%
! ATATCAAAGAGGTAAACTAA+GGG + chr2_2:48706266-48706285 Msa0255100:intron 25.0%
!! TTCCCTGATAAAATTGTTTT+AGG + chr2_2:48706307-48706326 Msa0255100:intron 25.0%
!! AATTTCTTTTGTCGAAGAAA+GGG + chr2_2:48706362-48706381 Msa0255100:intron 25.0%
! ACTCAGAAAATATTACTGTA+TGG - chr2_2:48707045-48707064 None:intergenic 25.0%
!! TACAGTAATATTTTCTGAGT+TGG + chr2_2:48707045-48707064 Msa0255100:intron 25.0%
!!! CATCCTTTTAATTTAGTACA+TGG + chr2_2:48707190-48707209 Msa0255100:intron 25.0%
! TTTAGTACATGGTAACTTAT+AGG + chr2_2:48707201-48707220 Msa0255100:intron 25.0%
!!! GTGAACTGTCTTTAAAATAA+CGG + chr2_2:48707323-48707342 Msa0255100:intron 25.0%
!!! TAATTAATTTTGGTTCGGTT+CGG + chr2_2:48707373-48707392 Msa0255100:intron 25.0%
! TGAGTTAACATAATAGTTAG+GGG - chr2_2:48707419-48707438 None:intergenic 25.0%
! CATGAGTTAACATAATAGTT+AGG - chr2_2:48707421-48707440 None:intergenic 25.0%
! GTTCTTTATATCAATGGAAA+TGG + chr2_2:48707698-48707717 Msa0255100:CDS 25.0%
! GACACAAATGATAAAGTTAA+TGG - chr2_2:48707911-48707930 None:intergenic 25.0%
! TTATTGCCATATATGTTCTA+GGG + chr2_2:48707943-48707962 Msa0255100:intron 25.0%
! ATAGTGATAGATGTTTCTTA+AGG + chr2_2:48708351-48708370 Msa0255100:intron 25.0%
! GTGCATGATAAATTAATTAG+AGG + chr2_2:48708978-48708997 Msa0255100:three_prime_UTR 25.0%
! ATTATACTCAAACAAATGGA+AGG - chr2_2:48709007-48709026 None:intergenic 25.0%
AATCCACTAAGATGAAGATA+TGG + chr2_2:48702527-48702546 Msa0255100:five_prime_UTR 30.0%
ATCCACTAAGATGAAGATAT+GGG + chr2_2:48702528-48702547 Msa0255100:five_prime_UTR 30.0%
! GATGAAGATATGGGTAATTT+TGG + chr2_2:48702537-48702556 Msa0255100:five_prime_UTR 30.0%
!! ATATGGGTAATTTTGGGTAA+TGG + chr2_2:48702544-48702563 Msa0255100:five_prime_UTR 30.0%
!! TAATTTTGGGTAATGGCTAT+TGG + chr2_2:48702551-48702570 Msa0255100:five_prime_UTR 30.0%
GAAAAGAAGAAGAAGAAGTA+AGG + chr2_2:48702587-48702606 Msa0255100:five_prime_UTR 30.0%
GTATTGTTTCCATGAGTAAT+TGG - chr2_2:48702666-48702685 None:intergenic 30.0%
GTTCTATTATACAGTGGTTT+AGG + chr2_2:48702775-48702794 Msa0255100:intron 30.0%
TATTATACAGTGGTTTAGGA+TGG + chr2_2:48702779-48702798 Msa0255100:intron 30.0%
TAATTGTTCCCAATTTGACT+TGG + chr2_2:48702971-48702990 Msa0255100:intron 30.0%
! AATTGTTCCCAATTTGACTT+GGG + chr2_2:48702972-48702991 Msa0255100:intron 30.0%
AAATAAGCCCAAGTCAAATT+GGG - chr2_2:48702982-48703001 None:intergenic 30.0%
AAAATAAGCCCAAGTCAAAT+TGG - chr2_2:48702983-48703002 None:intergenic 30.0%
! ATTTGGGGAGAATTTTCATA+TGG + chr2_2:48703194-48703213 Msa0255100:intron 30.0%
! TTTGGGGAGAATTTTCATAT+GGG + chr2_2:48703195-48703214 Msa0255100:intron 30.0%
!!! ATATTTTGGGATATAAGTGG+AGG + chr2_2:48703299-48703318 Msa0255100:intron 30.0%
TCTGACAGACAAATAAATGA+TGG - chr2_2:48703326-48703345 None:intergenic 30.0%
! CAGAAGTGTATATAGTGATT+TGG + chr2_2:48703342-48703361 Msa0255100:intron 30.0%
ACAAAAATTATACTCTGACC+TGG + chr2_2:48703422-48703441 Msa0255100:intron 30.0%
CAAAAATTATACTCTGACCT+GGG + chr2_2:48703423-48703442 Msa0255100:intron 30.0%
ATAATGATCTATAACATCCC+AGG - chr2_2:48703443-48703462 None:intergenic 30.0%
! TTAAGAACTTTCTAAGAGCA+TGG + chr2_2:48703572-48703591 Msa0255100:intron 30.0%
!!! AAGAGCATGGTTTTAAATTG+CGG + chr2_2:48703585-48703604 Msa0255100:intron 30.0%
CTTCATACTATGGCAAAATA+CGG + chr2_2:48703627-48703646 Msa0255100:intron 30.0%
TTCATACTATGGCAAAATAC+GGG + chr2_2:48703628-48703647 Msa0255100:intron 30.0%
TTTGAAGATTGAAGATTCAG+AGG + chr2_2:48703702-48703721 Msa0255100:intron 30.0%
ACTATGTGGTAAGAATCAAA+AGG + chr2_2:48703857-48703876 Msa0255100:intron 30.0%
CTATGTGGTAAGAATCAAAA+GGG + chr2_2:48703858-48703877 Msa0255100:intron 30.0%
TATGTGGTAAGAATCAAAAG+GGG + chr2_2:48703859-48703878 Msa0255100:intron 30.0%
TAGATATTGTGGAATACTTG+AGG + chr2_2:48703911-48703930 Msa0255100:intron 30.0%
TGTTAAGAGATGAATGAAAC+AGG - chr2_2:48704131-48704150 None:intergenic 30.0%
TCTGAGAATGATATCTTTCA+AGG + chr2_2:48704164-48704183 Msa0255100:intron 30.0%
AACCCCTTACTCATATTTAT+TGG - chr2_2:48704241-48704260 None:intergenic 30.0%
!!! CAGAAAAGTTGTAGTTTTGA+AGG + chr2_2:48704333-48704352 Msa0255100:intron 30.0%
GTGAGAAGGTGATTAAATTA+AGG - chr2_2:48704467-48704486 None:intergenic 30.0%
GTTAATCATTTGTGACACAA+AGG - chr2_2:48704489-48704508 None:intergenic 30.0%
TTAAGCCAAAAACTGCAAAT+TGG - chr2_2:48704553-48704572 None:intergenic 30.0%
GTGAGAAGCTGATTAAATTA+TGG - chr2_2:48704583-48704602 None:intergenic 30.0%
GTTAATCATTTGTGACACAA+AGG - chr2_2:48704489-48704508 None:intergenic 30.0%
! TTTTGGTCCCTTAACTATTT+AGG + chr2_2:48704647-48704666 Msa0255100:intron 30.0%
CAAGGTTACCTAAATAGTTA+AGG - chr2_2:48704658-48704677 None:intergenic 30.0%
CTTAACTATTTAGGTAACCT+TGG + chr2_2:48704656-48704675 Msa0255100:intron 30.0%
!!! TTACCTTGTTTTTACACAAG+AGG - chr2_2:48704743-48704762 None:intergenic 30.0%
TCTTGTGTAAAAACAAGGTA+AGG + chr2_2:48704742-48704761 Msa0255100:intron 30.0%
GAAAGGACTAAAATGTGTAA+CGG + chr2_2:48705096-48705115 Msa0255100:intron 30.0%
CGATACTACCTAAATAGTTA+AGG + chr2_2:48705169-48705188 Msa0255100:intron 30.0%
! TTTTGGTCCCTTAACTATTT+AGG - chr2_2:48704647-48704666 None:intergenic 30.0%
CCGAGTTTGTAGAAAAATTA+AGG - chr2_2:48705214-48705233 None:intergenic 30.0%
AGAAATGGAAGGATAATGAA+GGG - chr2_2:48705408-48705427 None:intergenic 30.0%
! ATTACTATCAGATCCTCTTT+TGG + chr2_2:48705511-48705530 Msa0255100:intron 30.0%
GAGAAAATAATTACTCCATC+AGG - chr2_2:48705713-48705732 None:intergenic 30.0%
! TGTTGTCACCTTTTATATCA+TGG + chr2_2:48705924-48705943 Msa0255100:intron 30.0%
GCATACAAATATTTGACTCA+TGG + chr2_2:48706197-48706216 Msa0255100:CDS 30.0%
GTCAAAACCTTATATCAAAG+AGG + chr2_2:48706255-48706274 Msa0255100:CDS 30.0%
TTATCAGGGAAGAAAGAAAA+GGG - chr2_2:48706298-48706317 None:intergenic 30.0%
TTTATCAGGGAAGAAAGAAA+AGG - chr2_2:48706299-48706318 None:intergenic 30.0%
CTTTCTTCGACAAAAGAAAT+TGG - chr2_2:48706363-48706382 None:intergenic 30.0%
! CAATTTCTTTTGTCGAAGAA+AGG + chr2_2:48706361-48706380 Msa0255100:intron 30.0%
!!! TTGCAATTTTTTGCAGCAAA+TGG + chr2_2:48706522-48706541 Msa0255100:intron 30.0%
GGTTAACTAAACCATAACTT+TGG - chr2_2:48706685-48706704 None:intergenic 30.0%
TTGAAGAAATCTTCCATTTC+AGG + chr2_2:48706873-48706892 Msa0255100:intron 30.0%
!!! TATTCGTTTTTAGCCTGAAA+TGG - chr2_2:48706889-48706908 None:intergenic 30.0%
AAGAAAGAGCAATCAGTATT+TGG - chr2_2:48706958-48706977 None:intergenic 30.0%
AATCGAGTTTAATAACGGTT+CGG + chr2_2:48707292-48707311 Msa0255100:intron 30.0%
!! CTGTCTTTAAAATAACGGTT+CGG + chr2_2:48707328-48707347 Msa0255100:intron 30.0%
TTAACATAATAGTTAGGGGT+TGG - chr2_2:48707415-48707434 None:intergenic 30.0%
CCATTGATATAAAGAACAAG+TGG - chr2_2:48707695-48707714 None:intergenic 30.0%
CCACTTGTTCTTTATATCAA+TGG + chr2_2:48707692-48707711 Msa0255100:CDS 30.0%
CTTTATATCAATGGAAATGG+TGG + chr2_2:48707701-48707720 Msa0255100:CDS 30.0%
GTTATTGCCATATATGTTCT+AGG + chr2_2:48707942-48707961 Msa0255100:intron 30.0%
TATTGCCATATATGTTCTAG+GGG + chr2_2:48707944-48707963 Msa0255100:intron 30.0%
AACATCAGATTCTCATTATG+TGG - chr2_2:48708185-48708204 None:intergenic 30.0%
! ATACAAAACTATGGCTTTTC+TGG - chr2_2:48708453-48708472 None:intergenic 30.0%
TACCCATATCTTCATCTTAG+TGG - chr2_2:48702533-48702552 None:intergenic 35.0%
GCAATTGGATTGTTGAAACA+AGG - chr2_2:48702815-48702834 None:intergenic 35.0%
AGAAAGAAGGTTGAAGCAAT+TGG - chr2_2:48702830-48702849 None:intergenic 35.0%
GTTTGAAAGGAGAAGAAAGA+AGG - chr2_2:48702843-48702862 None:intergenic 35.0%
TTGCAATGAGACATAACAGT+AGG + chr2_2:48703085-48703104 Msa0255100:intron 35.0%
TGCAATGAGACATAACAGTA+GGG + chr2_2:48703086-48703105 Msa0255100:intron 35.0%
CTACAATTGTAATCCAAGAG+TGG - chr2_2:48703112-48703131 None:intergenic 35.0%
CACTCTTGGATTACAATTGT+AGG + chr2_2:48703110-48703129 Msa0255100:intron 35.0%
! AGAATTTTCATATGGGCCAT+GGG + chr2_2:48703202-48703221 Msa0255100:intron 35.0%
GTTTGAAAATCTCTAGGCAA+AGG - chr2_2:48703249-48703268 None:intergenic 35.0%
TCCTACGTTTGAAAATCTCT+AGG - chr2_2:48703255-48703274 None:intergenic 35.0%
! ATTTTCAAACGTAGGAGATG+TGG + chr2_2:48703259-48703278 Msa0255100:intron 35.0%
! ATGTGCAGCTGCATATATTT+TGG + chr2_2:48703285-48703304 Msa0255100:intron 35.0%
! TGTGCAGCTGCATATATTTT+GGG + chr2_2:48703286-48703305 Msa0255100:intron 35.0%
TATTGCGAACCTTCATACTA+TGG + chr2_2:48703617-48703636 Msa0255100:intron 35.0%
! CGTATTTTGCCATAGTATGA+AGG - chr2_2:48703629-48703648 None:intergenic 35.0%
! AAAACCATGCTTGTTGCTTA+AGG + chr2_2:48703678-48703697 Msa0255100:intron 35.0%
AAAACCTTAAGCAACAAGCA+TGG - chr2_2:48703685-48703704 None:intergenic 35.0%
TTTGTAGGAAGTGATTGAGT+TGG + chr2_2:48703736-48703755 Msa0255100:intron 35.0%
!!! TGGCAATTTTTTGGGGAAAA+AGG + chr2_2:48703799-48703818 Msa0255100:intron 35.0%
!! TCAAAAGGGGTTATTTTGTG+TGG + chr2_2:48703872-48703891 Msa0255100:intron 35.0%
TATTGTGGAATACTTGAGGA+AGG + chr2_2:48703915-48703934 Msa0255100:intron 35.0%
ATAATGAAGGCTCCTTCTAA+TGG + chr2_2:48704018-48704037 Msa0255100:intron 35.0%
TTAGGCAAGTAACCATTAGA+AGG - chr2_2:48704033-48704052 None:intergenic 35.0%
AATGGTTACTTGCCTAATTC+TGG + chr2_2:48704036-48704055 Msa0255100:intron 35.0%
TTCATCTCTTAACACTGCTT+TGG + chr2_2:48704137-48704156 Msa0255100:intron 35.0%
GTTAAAAAAAAAGGGCAACC+CGG - chr2_2:48704834-48704853 None:intergenic 35.0%
TGACCAAAATGTGTAACAGA+GGG - chr2_2:48704919-48704938 None:intergenic 35.0%
ATGACCAAAATGTGTAACAG+AGG - chr2_2:48704920-48704939 None:intergenic 35.0%
!! TCTGGTATTCTTGTTGTTGA+AGG + chr2_2:48704996-48705015 Msa0255100:intron 35.0%
!! TTCTTGTTGTTGAAGGTTGA+TGG + chr2_2:48705003-48705022 Msa0255100:intron 35.0%
CTATTTAGGTAGTATCGCTT+TGG - chr2_2:48704853-48704872 None:intergenic 35.0%
GTTAAGAACACCTAAGATCA+TGG + chr2_2:48705275-48705294 Msa0255100:intron 35.0%
CAGAAATGGAAGGATAATGA+AGG - chr2_2:48705409-48705428 None:intergenic 35.0%
!! ATCAGATCCTCTTTTGGTTA+AGG + chr2_2:48705517-48705536 Msa0255100:intron 35.0%
TAGAAATTTCTTTGCAGCCT+TGG + chr2_2:48705675-48705694 Msa0255100:CDS 35.0%
ACTTTGACATAGAAGATGTG+AGG + chr2_2:48705768-48705787 Msa0255100:CDS 35.0%
CTTTGACATAGAAGATGTGA+GGG + chr2_2:48705769-48705788 Msa0255100:CDS 35.0%
TTTGACATAGAAGATGTGAG+GGG + chr2_2:48705770-48705789 Msa0255100:CDS 35.0%
TTCGACAAGCTTAGATTTGT+AGG + chr2_2:48705854-48705873 Msa0255100:CDS 35.0%
!! TTAGTATGTGTGGTGTTGTA+TGG - chr2_2:48706105-48706124 None:intergenic 35.0%
ATACAACACCACACATACTA+AGG + chr2_2:48706104-48706123 Msa0255100:CDS 35.0%
TCTGCTTTCTCATTTGTCAA+AGG + chr2_2:48706129-48706148 Msa0255100:CDS 35.0%
! AGATTACATCGTTTTCCAAG+TGG + chr2_2:48706159-48706178 Msa0255100:CDS 35.0%
TTTCTGAGCTCTGTATAGTT+AGG + chr2_2:48706398-48706417 Msa0255100:intron 35.0%
ACCATTTCAACAATTCGGTT+CGG - chr2_2:48706612-48706631 None:intergenic 35.0%
!! AAACCTTAAACGATTCGGTT+CGG - chr2_2:48706644-48706663 None:intergenic 35.0%
GTTCCAAACCTTAAACGATT+CGG - chr2_2:48706649-48706668 None:intergenic 35.0%
! ACCATAACTTTGGTTCAGTT+CGG - chr2_2:48706675-48706694 None:intergenic 35.0%
TCGGTTCATAGGTAAGAAAA+TGG - chr2_2:48706706-48706725 None:intergenic 35.0%
TGAACTTTGTTCATGTTGCT+TGG + chr2_2:48706844-48706863 Msa0255100:intron 35.0%
AATCAGTATGCAGTTTAGCT+AGG - chr2_2:48707081-48707100 None:intergenic 35.0%
GTTCAATCTCAATCCTGATA+TGG + chr2_2:48707223-48707242 Msa0255100:intron 35.0%
ACAAAGTGTGAAACCATATC+AGG - chr2_2:48707239-48707258 None:intergenic 35.0%
TCACACTTTGTAAGTTGTGA+CGG + chr2_2:48707248-48707267 Msa0255100:intron 35.0%
GAACTTCCAGATTGTAGATT+TGG + chr2_2:48707646-48707665 Msa0255100:intron 35.0%
TCTTGACCAAATCTACAATC+TGG - chr2_2:48707655-48707674 None:intergenic 35.0%
CCTCTGAATTTCTTCTGTTA+GGG - chr2_2:48707873-48707892 None:intergenic 35.0%
ACCTCTGAATTTCTTCTGTT+AGG - chr2_2:48707874-48707893 None:intergenic 35.0%
AACAGAAGAAATTCAGAGGT+TGG + chr2_2:48707874-48707893 Msa0255100:intron 35.0%
TCATTTGTGTCGTCATTCTA+TGG + chr2_2:48707920-48707939 Msa0255100:intron 35.0%
CTCATTATGTGGAATCATCA+AGG - chr2_2:48708174-48708193 None:intergenic 35.0%
AGTCAGCTAAGCAAATACTA+GGG - chr2_2:48708293-48708312 None:intergenic 35.0%
AACTGAAAATAGTGACACGA+AGG + chr2_2:48708317-48708336 Msa0255100:intron 35.0%
ACTGAAAATAGTGACACGAA+GGG + chr2_2:48708318-48708337 Msa0255100:intron 35.0%
!!! AGCCATAGTTTTGTATGACA+TGG + chr2_2:48708457-48708476 Msa0255100:intron 35.0%
CACCATGTCATACAAAACTA+TGG - chr2_2:48708462-48708481 None:intergenic 35.0%
TGACAATGAGTGTTCTCATT+TGG - chr2_2:48708527-48708546 None:intergenic 35.0%
CTCATTGTCACGAATAAGAT+TGG + chr2_2:48708537-48708556 Msa0255100:intron 35.0%
!! TATGATTACCTGTCACTTTC+AGG + chr2_2:48708606-48708625 Msa0255100:intron 35.0%
!! ATGATTACCTGTCACTTTCA+GGG + chr2_2:48708607-48708626 Msa0255100:intron 35.0%
AGATTAAGGATGTGTTGTCT+AGG - chr2_2:48708650-48708669 None:intergenic 35.0%
AGACAACACATCCTTAATCT+TGG + chr2_2:48708650-48708669 Msa0255100:CDS 35.0%
GACAACACATCCTTAATCTT+GGG + chr2_2:48708651-48708670 Msa0255100:CDS 35.0%
CGATTTGTACATTGCTATGT+CGG + chr2_2:48708912-48708931 Msa0255100:three_prime_UTR 35.0%
!! TTGACTTGTTCTGATGAAGT+TGG + chr2_2:48709058-48709077 Msa0255100:three_prime_UTR 35.0%
CTCATCACTCCAATTACTCA+TGG + chr2_2:48702654-48702673 Msa0255100:exon 40.0%
CAATACCTACTTCCATCAAC+AGG + chr2_2:48702680-48702699 Msa0255100:CDS 40.0%
! GAAAACCTGTTGATGGAAGT+AGG - chr2_2:48702688-48702707 None:intergenic 40.0%
AGAGAAGGAAAACCTGTTGA+TGG - chr2_2:48702695-48702714 None:intergenic 40.0%
!!! AGAGAGGGTTTTGGTTTGAA+AGG - chr2_2:48702856-48702875 None:intergenic 40.0%
AGAGCAAGTGAGAGTAAACT+TGG - chr2_2:48702887-48702906 None:intergenic 40.0%
AGTACCATTAGAAGATGAGG+CGG - chr2_2:48702911-48702930 None:intergenic 40.0%
!! GGAAGTACCATTAGAAGATG+AGG - chr2_2:48702914-48702933 None:intergenic 40.0%
! GAGAATTTTCATATGGGCCA+TGG + chr2_2:48703201-48703220 Msa0255100:intron 40.0%
! GCCTAGAGATTTTCAAACGT+AGG + chr2_2:48703251-48703270 Msa0255100:intron 40.0%
! CTGACGTGTTTTATGCATAG+TGG + chr2_2:48703477-48703496 Msa0255100:intron 40.0%
!!! ATGGTTTTAAATTGCGGTCG+CGG + chr2_2:48703591-48703610 Msa0255100:intron 40.0%
GAGGTGAAACTTGAGTTTGT+AGG + chr2_2:48703721-48703740 Msa0255100:intron 40.0%
! GGGGAAAAAGGTGAACTTTT+TGG + chr2_2:48703811-48703830 Msa0255100:intron 40.0%
GAATACTTGAGGAAGGAACA+AGG + chr2_2:48703922-48703941 Msa0255100:intron 40.0%
TACTTGCCTAATTCTGGTGA+AGG + chr2_2:48704042-48704061 Msa0255100:intron 40.0%
AACACACCTTCACCAGAATT+AGG - chr2_2:48704051-48704070 None:intergenic 40.0%
!! GGTGAAGGTGTGTTTTCTTA+AGG + chr2_2:48704057-48704076 Msa0255100:intron 40.0%
TTTGTGACACAAAGGTGAGA+AGG - chr2_2:48704481-48704500 None:intergenic 40.0%
! CGAGACCAATTTGCAGTTTT+TGG + chr2_2:48704545-48704564 Msa0255100:intron 40.0%
CAGCCTCTTGTGTAAAAACA+AGG + chr2_2:48704737-48704756 Msa0255100:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr2_2:48704768-48704787 Msa0255100:intron 40.0%
GTGTAACAGAGGGAAGTTAA+GGG - chr2_2:48704909-48704928 None:intergenic 40.0%
TGTGTAACAGAGGGAAGTTA+AGG - chr2_2:48704910-48704929 None:intergenic 40.0%
! CTTCCCTCTGTTACACATTT+TGG + chr2_2:48704913-48704932 Msa0255100:intron 40.0%
!!! ATGGTTTTAAATTGCGGTCG+CGG + chr2_2:48703591-48703610 Msa0255100:intron 40.0%
GCATATGAGACAGAAATGGA+AGG - chr2_2:48705419-48705438 None:intergenic 40.0%
GTCTGCATATGAGACAGAAA+TGG - chr2_2:48705423-48705442 None:intergenic 40.0%
TAAGCTTGTCGAAGTCAATC+GGG - chr2_2:48705847-48705866 None:intergenic 40.0%
CTAAGCTTGTCGAAGTCAAT+CGG - chr2_2:48705848-48705867 None:intergenic 40.0%
GAGAATCACTTAAGATCCTG+CGG + chr2_2:48705876-48705895 Msa0255100:CDS 40.0%
TCCCACAAAACCTAAAACAG+CGG - chr2_2:48706008-48706027 None:intergenic 40.0%
ATATACGTTGCCAATGTCCA+AGG - chr2_2:48706034-48706053 None:intergenic 40.0%
GACATTGGCAACGTATATAG+TGG + chr2_2:48706036-48706055 Msa0255100:CDS 40.0%
! TTGGCAACGTATATAGTGGA+AGG + chr2_2:48706040-48706059 Msa0255100:CDS 40.0%
! TGGCAACGTATATAGTGGAA+GGG + chr2_2:48706041-48706060 Msa0255100:CDS 40.0%
TGTATGGCACATGCTCTTAA+TGG - chr2_2:48706089-48706108 None:intergenic 40.0%
! ATCGTTTTCCAAGTGGAATC+TGG + chr2_2:48706166-48706185 Msa0255100:CDS 40.0%
! TCGTTTTCCAAGTGGAATCT+GGG + chr2_2:48706167-48706186 Msa0255100:CDS 40.0%
CAAATATTTGACTCATGGGG+TGG + chr2_2:48706202-48706221 Msa0255100:CDS 40.0%
CAAGAGGAATCATAGAGACT+TGG - chr2_2:48706454-48706473 None:intergenic 40.0%
CAAGTCTCTATGATTCCTCT+TGG + chr2_2:48706452-48706471 Msa0255100:intron 40.0%
TCTCTATGATTCCTCTTGGT+TGG + chr2_2:48706456-48706475 Msa0255100:intron 40.0%
TATGATTCCTCTTGGTTGGT+TGG + chr2_2:48706460-48706479 Msa0255100:intron 40.0%
GGCTTCGTAAATAATGTGAC+TGG + chr2_2:48706485-48706504 Msa0255100:intron 40.0%
TGTGTAAGCCTTGACTGTTT+AGG + chr2_2:48706558-48706577 Msa0255100:intron 40.0%
GTGTAAGCCTTGACTGTTTA+GGG + chr2_2:48706559-48706578 Msa0255100:intron 40.0%
TGTAAGCCTTGACTGTTTAG+GGG + chr2_2:48706560-48706579 Msa0255100:intron 40.0%
ACCGAACCGAATTGTTGAAA+TGG + chr2_2:48706608-48706627 Msa0255100:intron 40.0%
ACCGAATTGTTGAAATGGTC+CGG + chr2_2:48706613-48706632 Msa0255100:intron 40.0%
AAACCGAACCGAATCGTTTA+AGG + chr2_2:48706638-48706657 Msa0255100:intron 40.0%
! GAACCGAATCGTTTAAGGTT+TGG + chr2_2:48706643-48706662 Msa0255100:intron 40.0%
ACCGAACTGAACCAAAGTTA+TGG + chr2_2:48706671-48706690 Msa0255100:intron 40.0%
!! AAAGCAGTGTTGGTTCAGTT+CGG - chr2_2:48706730-48706749 None:intergenic 40.0%
CTTTGTAAGTTGTGACGGTT+CGG + chr2_2:48707253-48707272 Msa0255100:intron 40.0%
CGGTTCGATAACCAATGTAA+TGG + chr2_2:48707348-48707367 Msa0255100:intron 40.0%
!!! TTTTGGTTCGGTTCGGTTTT+TGG + chr2_2:48707380-48707399 Msa0255100:intron 40.0%
AAAGAACAAGTGGTGTGTCT+GGG - chr2_2:48707685-48707704 None:intergenic 40.0%
TAAAGAACAAGTGGTGTGTC+TGG - chr2_2:48707686-48707705 None:intergenic 40.0%
!! GACACTGGAGTTGATGTAAT+TGG + chr2_2:48707743-48707762 Msa0255100:CDS 40.0%
TTGATGTAATTGGACTCGAC+TGG + chr2_2:48707753-48707772 Msa0255100:CDS 40.0%
GGAGAAGAAGATTAGGTAGT+GGG + chr2_2:48707795-48707814 Msa0255100:CDS 40.0%
!! AGAAGATTAGGTAGTGGGAT+TGG + chr2_2:48707800-48707819 Msa0255100:CDS 40.0%
GAGGAGAGAATAAAGAAGCA+GGG - chr2_2:48707844-48707863 None:intergenic 40.0%
AGAGGAGAGAATAAAGAAGC+AGG - chr2_2:48707845-48707864 None:intergenic 40.0%
CCCTAACAGAAGAAATTCAG+AGG + chr2_2:48707870-48707889 Msa0255100:CDS 40.0%
AGTCTCCCCTAGAACATATA+TGG - chr2_2:48707952-48707971 None:intergenic 40.0%
ATAACAGCGCTATAGCATAG+TGG - chr2_2:48708029-48708048 None:intergenic 40.0%
CACTTGTCATATAGTGGCTA+TGG - chr2_2:48708146-48708165 None:intergenic 40.0%
GAGAGTCACTTGTCATATAG+TGG - chr2_2:48708152-48708171 None:intergenic 40.0%
GAATCTGATGTTTCATCACG+TGG + chr2_2:48708193-48708212 Msa0255100:intron 40.0%
GTGGTGATAAATGCATTACC+AGG + chr2_2:48708212-48708231 Msa0255100:intron 40.0%
CTGGATCATAAACATTCGCT+AGG - chr2_2:48708243-48708262 None:intergenic 40.0%
CCTACAGAAATCTTAGACAC+TGG - chr2_2:48708262-48708281 None:intergenic 40.0%
! CCAGTGTCTAAGATTTCTGT+AGG + chr2_2:48708259-48708278 Msa0255100:intron 40.0%
CAGTCAGCTAAGCAAATACT+AGG - chr2_2:48708294-48708313 None:intergenic 40.0%
TGGGTTTAATCAGTCAGACT+TGG + chr2_2:48708418-48708437 Msa0255100:intron 40.0%
GGGTTTAATCAGTCAGACTT+GGG + chr2_2:48708419-48708438 Msa0255100:intron 40.0%
!! AACTATGGCTTTTCTGGCAA+AGG - chr2_2:48708447-48708466 None:intergenic 40.0%
AACCTGAACTCTTCCAGAAA+TGG - chr2_2:48708843-48708862 None:intergenic 40.0%
! GGCTATTGGTAGCAGTTTAG+AGG + chr2_2:48702565-48702584 Msa0255100:five_prime_UTR 45.0%
! AACTTGGTGAGAGTGAGAGA+GGG - chr2_2:48702871-48702890 None:intergenic 45.0%
! AAACTTGGTGAGAGTGAGAG+AGG - chr2_2:48702872-48702891 None:intergenic 45.0%
AATCTCTAGGCAAAGGAGAC+AGG - chr2_2:48703242-48703261 None:intergenic 45.0%
GTTGTTGTCATGTGACCGAA+AGG + chr2_2:48704692-48704711 Msa0255100:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr2_2:48704732-48704751 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr2_2:48704764-48704783 Msa0255100:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr2_2:48704767-48704786 Msa0255100:intron 45.0%
! TGCAGCCTTGGAAAGCTTTT+AGG + chr2_2:48705687-48705706 Msa0255100:CDS 45.0%
TCAGGCCTAAAAGCTTTCCA+AGG - chr2_2:48705695-48705714 None:intergenic 45.0%
! TGGAAAGCTTTTAGGCCTGA+TGG + chr2_2:48705695-48705714 Msa0255100:CDS 45.0%
! CGTATCGGTGACTGTATAAC+AGG - chr2_2:48705797-48705816 None:intergenic 45.0%
CTGCGGCAAGAGGTAAAATT+CGG + chr2_2:48705893-48705912 Msa0255100:intron 45.0%
!!! TGCCGCTGTTTTAGGTTTTG+TGG + chr2_2:48706003-48706022 Msa0255100:CDS 45.0%
!!! GCCGCTGTTTTAGGTTTTGT+GGG + chr2_2:48706004-48706023 Msa0255100:CDS 45.0%
! GGCAACGTATATAGTGGAAG+GGG + chr2_2:48706042-48706061 Msa0255100:CDS 45.0%
! GCAACGTATATAGTGGAAGG+GGG + chr2_2:48706043-48706062 Msa0255100:CDS 45.0%
AGCAGAGTCCTTAGTATGTG+TGG - chr2_2:48706115-48706134 None:intergenic 45.0%
! CGTTTTCCAAGTGGAATCTG+GGG + chr2_2:48706168-48706187 Msa0255100:CDS 45.0%
ACAACTGCCACCTCATATGT+GGG + chr2_2:48706225-48706244 Msa0255100:CDS 45.0%
! ATTCCTCTTGGTTGGTTGGT+TGG + chr2_2:48706464-48706483 Msa0255100:intron 45.0%
CCCGGACCATTTCAACAATT+CGG - chr2_2:48706617-48706636 None:intergenic 45.0%
CCGAATTGTTGAAATGGTCC+GGG + chr2_2:48706614-48706633 Msa0255100:intron 45.0%
!! TTCAGTTCGGTTCGGTTCAT+AGG - chr2_2:48706717-48706736 None:intergenic 45.0%
!! AGTGTTGGTTCAGTTCGGTT+CGG - chr2_2:48706725-48706744 None:intergenic 45.0%
!! AACCAACACTGCTTTTCTGC+AGG + chr2_2:48706735-48706754 Msa0255100:intron 45.0%
GAGCAGGATGGTCAGAAAAA+TGG - chr2_2:48707153-48707172 None:intergenic 45.0%
!! TAAGTTGTGACGGTTCGGTT+CGG + chr2_2:48707258-48707277 Msa0255100:intron 45.0%
TTAAGCGTGCTTGTGACTTC+AGG + chr2_2:48707446-48707465 Msa0255100:intron 45.0%
TAAGCGTGCTTGTGACTTCA+GGG + chr2_2:48707447-48707466 Msa0255100:intron 45.0%
TGTCTATCATACGCTCGAGA+AGG - chr2_2:48707727-48707746 None:intergenic 45.0%
GCTGATGGGAGAAGAAGATT+AGG + chr2_2:48707788-48707807 Msa0255100:CDS 45.0%
GGGAGAAGAAGATTAGGTAG+TGG + chr2_2:48707794-48707813 Msa0255100:CDS 45.0%
TCTTCTGTTAGGGCAGTAAG+AGG - chr2_2:48707863-48707882 None:intergenic 45.0%
TCGCAGGTCATGGAAAATAG+CGG + chr2_2:48707991-48708010 Msa0255100:intron 45.0%
CGTAGCGGTATACACTATAG+CGG - chr2_2:48708123-48708142 None:intergenic 45.0%
ATATAGTGGCTATGGCGTAG+CGG - chr2_2:48708138-48708157 None:intergenic 45.0%
AACATTCGCTAGGAAGATCC+TGG - chr2_2:48708233-48708252 None:intergenic 45.0%
CAGCTAAGCAAATACTAGGG+AGG - chr2_2:48708290-48708309 None:intergenic 45.0%
CACATCCTTAATCTTGGGCA+TGG + chr2_2:48708656-48708675 Msa0255100:CDS 45.0%
GAACACCATGCCCAAGATTA+AGG - chr2_2:48708664-48708683 None:intergenic 45.0%
AAATGCGCTACAGCTTCTTC+CGG - chr2_2:48708698-48708717 None:intergenic 45.0%
GGCAAAGTAAGTACAACAGG+TGG - chr2_2:48708808-48708827 None:intergenic 45.0%
CCAGGCAAAGTAAGTACAAC+AGG - chr2_2:48708811-48708830 None:intergenic 45.0%
CCTGTTGTACTTACTTTGCC+TGG + chr2_2:48708808-48708827 Msa0255100:three_prime_UTR 45.0%
CAGAAATGGCTTGAACTACC+AGG - chr2_2:48708829-48708848 None:intergenic 45.0%
CTGGTAGTTCAAGCCATTTC+TGG + chr2_2:48708827-48708846 Msa0255100:three_prime_UTR 45.0%
! AGCCATTTCTGGAAGAGTTC+AGG + chr2_2:48708838-48708857 Msa0255100:three_prime_UTR 45.0%
GAGAGAGAGAGAGAGAGAGA+AGG - chr2_2:48702710-48702729 None:intergenic 50.0%
! GTGAGAGTGAGAGAGGGTTT+TGG - chr2_2:48702865-48702884 None:intergenic 50.0%
TCTGCCGCCTCATCTTCTAA+TGG + chr2_2:48702904-48702923 Msa0255100:CDS 50.0%
CATAACAGTAGGGCCACTCT+TGG + chr2_2:48703096-48703115 Msa0255100:intron 50.0%
CATATGGGCCATGGGTAGAT+TGG + chr2_2:48703210-48703229 Msa0255100:intron 50.0%
GGAACATGCCAATCTACCCA+TGG - chr2_2:48703221-48703240 None:intergenic 50.0%
TTAGGTAACCTTGGCGCAAC+TGG + chr2_2:48704665-48704684 Msa0255100:intron 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr2_2:48704676-48704695 None:intergenic 50.0%
GTCATGTGACCGAAAGGTCA+CGG + chr2_2:48704698-48704717 Msa0255100:intron 50.0%
TCATGTGACCGAAAGGTCAC+GGG + chr2_2:48704699-48704718 Msa0255100:intron 50.0%
GACTTGAACCCGTGACCTTT+CGG - chr2_2:48704710-48704729 None:intergenic 50.0%
CTCTTGCCTGTATCTCAGCA+GGG - chr2_2:48705450-48705469 None:intergenic 50.0%
TCTCTTGCCTGTATCTCAGC+AGG - chr2_2:48705451-48705470 None:intergenic 50.0%
CTCGCAGCCTTAACCAAAAG+AGG - chr2_2:48705527-48705546 None:intergenic 50.0%
!! CTTTTGGTTAAGGCTGCGAG+AGG + chr2_2:48705527-48705546 Msa0255100:CDS 50.0%
AGATCCTGTTAGTCGTCCTC+CGG + chr2_2:48705550-48705569 Msa0255100:CDS 50.0%
TAGCCATGTACCTTCCTGCT+TGG - chr2_2:48705589-48705608 None:intergenic 50.0%
AACATCCATCCTTCCGAGAG+AGG + chr2_2:48705630-48705649 Msa0255100:CDS 50.0%
CTTACACCTCTACCTGCGTT+CGG + chr2_2:48705740-48705759 Msa0255100:CDS 50.0%
TTACACCTCTACCTGCGTTC+GGG + chr2_2:48705741-48705760 Msa0255100:CDS 50.0%
AATCCCTCCTCAGAGCGTAT+CGG - chr2_2:48705812-48705831 None:intergenic 50.0%
!! ACGCTCTGAGGAGGGATTAA+AGG + chr2_2:48705814-48705833 Msa0255100:CDS 50.0%
ACTTAAGATCCTGCGGCAAG+AGG + chr2_2:48705883-48705902 Msa0255100:CDS 50.0%
! CGAATTTTACCTCTTGCCGC+AGG - chr2_2:48705895-48705914 None:intergenic 50.0%
!!! TAGGTTTTGTGGGAGCACCT+TGG + chr2_2:48706014-48706033 Msa0255100:CDS 50.0%
GACAACTGCCACCTCATATG+TGG + chr2_2:48706224-48706243 Msa0255100:CDS 50.0%
CAGAGTTCCCACATATGAGG+TGG - chr2_2:48706235-48706254 None:intergenic 50.0%
CACCTCATATGTGGGAACTC+TGG + chr2_2:48706233-48706252 Msa0255100:CDS 50.0%
GACCAGAGTTCCCACATATG+AGG - chr2_2:48706238-48706257 None:intergenic 50.0%
AAGCCAACCAACCAACCAAG+AGG - chr2_2:48706470-48706489 None:intergenic 50.0%
AAGCCTTGACTGTTTAGGGG+TGG + chr2_2:48706563-48706582 Msa0255100:intron 50.0%
AGCCTTGACTGTTTAGGGGT+GGG + chr2_2:48706564-48706583 Msa0255100:intron 50.0%
!!! ACGATTCGGTTCGGTTTTCC+CGG - chr2_2:48706635-48706654 None:intergenic 50.0%
TGCCTGCAGAAAAGCAGTGT+TGG - chr2_2:48706740-48706759 None:intergenic 50.0%
GCATGTCAACTAGAGCAGGA+TGG - chr2_2:48707165-48707184 None:intergenic 50.0%
TACGGCATGTCAACTAGAGC+AGG - chr2_2:48707169-48707188 None:intergenic 50.0%
CTCGAGCGTATGATAGACAC+TGG + chr2_2:48707728-48707747 Msa0255100:CDS 50.0%
AATTGGACTCGACTGGACAG+TGG + chr2_2:48707760-48707779 Msa0255100:CDS 50.0%
ACTCGACTGGACAGTGGATA+TGG + chr2_2:48707766-48707785 Msa0255100:CDS 50.0%
TGGACAGTGGATATGGCTGA+TGG + chr2_2:48707773-48707792 Msa0255100:CDS 50.0%
GGACAGTGGATATGGCTGAT+GGG + chr2_2:48707774-48707793 Msa0255100:CDS 50.0%
GATTGGTGTGCAAGGAAACG+TGG + chr2_2:48707817-48707836 Msa0255100:CDS 50.0%
CCTGCGATTGACAACTCAAG+TGG - chr2_2:48707978-48707997 None:intergenic 50.0%
! CCACTTGAGTTGTCAATCGC+AGG + chr2_2:48707975-48707994 Msa0255100:intron 50.0%
GAGTTGTCAATCGCAGGTCA+TGG + chr2_2:48707981-48708000 Msa0255100:intron 50.0%
CTCACAACCCTGAAAGTGAC+AGG - chr2_2:48708617-48708636 None:intergenic 50.0%
!! CTGTCACTTTCAGGGTTGTG+AGG + chr2_2:48708615-48708634 Msa0255100:intron 50.0%
CTTGGGCATGGTGTTCTTGT+TGG + chr2_2:48708668-48708687 Msa0255100:CDS 50.0%
TGGTGTTCTTGTTGGCACAC+CGG + chr2_2:48708676-48708695 Msa0255100:CDS 50.0%
GCTATGTCGGCGAATAGATG+AGG + chr2_2:48708925-48708944 Msa0255100:three_prime_UTR 50.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr2_2:48704711-48704730 Msa0255100:intron 55.0%
! CAAATGGTGGGACCCCTTTC+CGG + chr2_2:48704780-48704799 Msa0255100:intron 55.0%
CTAAAGCTCCCGCATACGCA+GGG - chr2_2:48704807-48704826 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG - chr2_2:48704808-48704827 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + chr2_2:48704812-48704831 Msa0255100:intron 55.0%
ACGTGACCCTGCTGAGATAC+AGG + chr2_2:48705441-48705460 Msa0255100:intron 55.0%
TCTGACCTCTCTCGGAAGGA+TGG - chr2_2:48705638-48705657 None:intergenic 55.0%
CAGTCGTCTCTGACCTCTCT+CGG - chr2_2:48705646-48705665 None:intergenic 55.0%
! CGAACGCAGGTAGAGGTGTA+AGG - chr2_2:48705742-48705761 None:intergenic 55.0%
TCAAAGTCGATCCCGAACGC+AGG - chr2_2:48705755-48705774 None:intergenic 55.0%
ACAGTCACCGATACGCTCTG+AGG + chr2_2:48705802-48705821 Msa0255100:CDS 55.0%
!! TCACCGATACGCTCTGAGGA+GGG + chr2_2:48705806-48705825 Msa0255100:CDS 55.0%
!! GGTGGTGATGCCGCTGTTTT+AGG + chr2_2:48705995-48706014 Msa0255100:CDS 55.0%
!! TGTGGGAGCACCTTGGACAT+TGG + chr2_2:48706021-48706040 Msa0255100:CDS 55.0%
AGTGAGCCCCAGATTCCACT+TGG - chr2_2:48706177-48706196 None:intergenic 55.0%
TGCCCACCCCTAAACAGTCA+AGG - chr2_2:48706569-48706588 None:intergenic 55.0%
TGACTGTTTAGGGGTGGGCA+TGG + chr2_2:48706569-48706588 Msa0255100:intron 55.0%
GTTTAGGGGTGGGCATGGTT+CGG + chr2_2:48706574-48706593 Msa0255100:intron 55.0%
!! GGTAGTGGGATTGGTGTGCA+AGG + chr2_2:48707809-48707828 Msa0255100:CDS 55.0%
TTCAGGGTTGTGAGGTCTGC+AGG + chr2_2:48708623-48708642 Msa0255100:intron 55.0%
CGCATTTCTTTGACGTCGCG+AGG + chr2_2:48708711-48708730 Msa0255100:CDS 55.0%
CGGAAAGGGGTCCCACCATT+TGG - chr2_2:48704782-48704801 None:intergenic 60.0%
CATACGCAGGGTCCGGAAAG+GGG - chr2_2:48704795-48704814 None:intergenic 60.0%
GCATACGCAGGGTCCGGAAA+GGG - chr2_2:48704796-48704815 None:intergenic 60.0%
CTTTCCGGACCCTGCGTATG+CGG + chr2_2:48704795-48704814 Msa0255100:intron 60.0%
TTTCCGGACCCTGCGTATGC+GGG + chr2_2:48704796-48704815 Msa0255100:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG + chr2_2:48704813-48704832 Msa0255100:intron 60.0%
CATGCCGGAGGACGACTAAC+AGG - chr2_2:48705557-48705576 None:intergenic 60.0%
CTGTTAGTCGTCCTCCGGCA+TGG + chr2_2:48705555-48705574 Msa0255100:CDS 60.0%
GCTTGGCGCATCATCCATGC+CGG - chr2_2:48705572-48705591 None:intergenic 60.0%
GCATGGATGATGCGCCAAGC+AGG + chr2_2:48705572-48705591 Msa0255100:CDS 60.0%
GGATGATGCGCCAAGCAGGA+AGG + chr2_2:48705576-48705595 Msa0255100:CDS 60.0%
! GCGCCAAGCAGGAAGGTACA+TGG + chr2_2:48705583-48705602 Msa0255100:CDS 60.0%
CGTCTCTGACCTCTCTCGGA+AGG - chr2_2:48705642-48705661 None:intergenic 60.0%
TCGATCCCGAACGCAGGTAG+AGG - chr2_2:48705749-48705768 None:intergenic 60.0%
!! GTCACCGATACGCTCTGAGG+AGG + chr2_2:48705805-48705824 Msa0255100:CDS 60.0%
CGCATACGCAGGGTCCGGAA+AGG - chr2_2:48704797-48704816 None:intergenic 65.0%
TGGCGCATCATCCATGCCGG+AGG - chr2_2:48705569-48705588 None:intergenic 65.0%
GCTCCCGCATACGCAGGGTC+CGG - chr2_2:48704802-48704821 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 48702513 48709092 48702513 ID=Msa0255100;Name=Msa0255100
chr2_2 mRNA 48702513 48709092 48702513 ID=Msa0255100-mRNA-1;Parent=Msa0255100;Name=Msa0255100-mRNA-1;_AED=0.06;_eAED=0.06;_QI=138|1|1|1|0.83|0.71|7|308|408
chr2_2 exon 48702513 48702623 48702513 ID=Msa0255100-mRNA-1:exon:14754;Parent=Msa0255100-mRNA-1
chr2_2 exon 48702646 48702701 48702646 ID=Msa0255100-mRNA-1:exon:14755;Parent=Msa0255100-mRNA-1
chr2_2 exon 48702789 48702925 48702789 ID=Msa0255100-mRNA-1:exon:14756;Parent=Msa0255100-mRNA-1
chr2_2 exon 48705522 48705904 48705522 ID=Msa0255100-mRNA-1:exon:14757;Parent=Msa0255100-mRNA-1
chr2_2 exon 48705992 48706276 48705992 ID=Msa0255100-mRNA-1:exon:14758;Parent=Msa0255100-mRNA-1
chr2_2 exon 48707656 48707891 48707656 ID=Msa0255100-mRNA-1:exon:14759;Parent=Msa0255100-mRNA-1
chr2_2 exon 48708628 48709092 48708628 ID=Msa0255100-mRNA-1:exon:14760;Parent=Msa0255100-mRNA-1
chr2_2 five_prime_UTR 48702513 48702623 48702513 ID=Msa0255100-mRNA-1:five_prime_utr;Parent=Msa0255100-mRNA-1
chr2_2 five_prime_UTR 48702646 48702672 48702646 ID=Msa0255100-mRNA-1:five_prime_utr;Parent=Msa0255100-mRNA-1
chr2_2 CDS 48702673 48702701 48702673 ID=Msa0255100-mRNA-1:cds;Parent=Msa0255100-mRNA-1
chr2_2 CDS 48702789 48702925 48702789 ID=Msa0255100-mRNA-1:cds;Parent=Msa0255100-mRNA-1
chr2_2 CDS 48705522 48705904 48705522 ID=Msa0255100-mRNA-1:cds;Parent=Msa0255100-mRNA-1
chr2_2 CDS 48705992 48706276 48705992 ID=Msa0255100-mRNA-1:cds;Parent=Msa0255100-mRNA-1
chr2_2 CDS 48707656 48707891 48707656 ID=Msa0255100-mRNA-1:cds;Parent=Msa0255100-mRNA-1
chr2_2 CDS 48708628 48708784 48708628 ID=Msa0255100-mRNA-1:cds;Parent=Msa0255100-mRNA-1
chr2_2 three_prime_UTR 48708785 48709092 48708785 ID=Msa0255100-mRNA-1:three_prime_utr;Parent=Msa0255100-mRNA-1
Gene Sequence

>Msa0255100

ATGGAAACAATACCTACTTCCATCAACAGTGGTTTAGGATGGAAATCATCTTCCTTGTTTCAACAATCCAATTGCTTCAACCTTCTTTCTTCTCCTTTCAAACCAAAACCCTCTCTCACTCTCACCAAGTTTACTCTCACTTGCTCTGCCGCCTCATCTTCTAATGATCCTCTTTTGGTTAAGGCTGCGAGAGGAGATCCTGTTAGTCGTCCTCCGGCATGGATGATGCGCCAAGCAGGAAGGTACATGGCTATTTACAGAAAGTTAGCTGAGAAACATCCATCCTTCCGAGAGAGGTCAGAGACGACTGATCTCATTGTAGAAATTTCTTTGCAGCCTTGGAAAGCTTTTAGGCCTGATGGAGTAATTATTTTCTCTGACATCCTTACACCTCTACCTGCGTTCGGGATCGACTTTGACATAGAAGATGTGAGGGGACCTGTTATACAGTCACCGATACGCTCTGAGGAGGGATTAAAGGTTTTACACCCGATTGACTTCGACAAGCTTAGATTTGTAGGAGAATCACTTAAGATCCTGCGGCAAGAGGTTGGTGGTGATGCCGCTGTTTTAGGTTTTGTGGGAGCACCTTGGACATTGGCAACGTATATAGTGGAAGGGGGTACAACGCGCACATATACAACCATTAAGAGCATGTGCCATACAACACCACACATACTAAGGACTCTGCTTTCTCATTTGTCAAAGGCAATAGCAGATTACATCGTTTTCCAAGTGGAATCTGGGGCTCACTGCATACAAATATTTGACTCATGGGGTGGACAACTGCCACCTCATATGTGGGAACTCTGGTCAAAACCTTATATCAAAGAGATTGTAGATTTGGTCAAGAAAAAGTGCCCAGACACACCACTTGTTCTTTATATCAATGGAAATGGTGGCCTTCTCGAGCGTATGATAGACACTGGAGTTGATGTAATTGGACTCGACTGGACAGTGGATATGGCTGATGGGAGAAGAAGATTAGGTAGTGGGATTGGTGTGCAAGGAAACGTGGACCCTGCTTCTTTATTCTCTCCTCTTACTGCCCTAACAGAAGAAATTCAGAGGGTTGTGAGGTCTGCAGGACCTAGACAACACATCCTTAATCTTGGGCATGGTGTTCTTGTTGGCACACCGGAAGAAGCTGTAGCGCATTTCTTTGACGTCGCGAGGAGCTTGAAGTTTGACACACTCTCTCAAAATAACACTGCAAATGTAGCTTAA

Protein sequence

>Msa0255100

METIPTSINSGLGWKSSSLFQQSNCFNLLSSPFKPKPSLTLTKFTLTCSAASSSNDPLLVKAARGDPVSRPPAWMMRQAGRYMAIYRKLAEKHPSFRERSETTDLIVEISLQPWKAFRPDGVIIFSDILTPLPAFGIDFDIEDVRGPVIQSPIRSEEGLKVLHPIDFDKLRFVGESLKILRQEVGGDAAVLGFVGAPWTLATYIVEGGTTRTYTTIKSMCHTTPHILRTLLSHLSKAIADYIVFQVESGAHCIQIFDSWGGQLPPHMWELWSKPYIKEIVDLVKKKCPDTPLVLYINGNGGLLERMIDTGVDVIGLDWTVDMADGRRRLGSGIGVQGNVDPASLFSPLTALTEEIQRVVRSAGPRQHILNLGHGVLVGTPEEAVAHFFDVARSLKFDTLSQNNTANVA*