AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1218740


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1218740 MtrunA17_Chr4g0068361 98.182 165 3 0 1 165 1 165 5.99e-120 335
Msa1218740 MtrunA17_Chr2g0294401 80.198 101 19 1 65 165 25 124 8.31e-58 176
Msa1218740 MtrunA17_Chr3g0131981 50.000 98 46 2 67 162 91 187 9.69e-29 104
Msa1218740 MtrunA17_Chr5g0446761 47.959 98 48 2 67 162 19 115 1.18e-26 97.4
Msa1218740 MtrunA17_Chr8g0386081 50.602 83 40 1 81 163 1 82 2.56e-26 95.5
Msa1218740 MtrunA17_Chr8g0386091 44.086 93 50 2 72 163 4 95 3.58e-21 82.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1218740 AT1G32583.2 46.939 98 49 2 66 161 79 175 1.85e-27 101
Msa1218740 AT1G32583.1 46.939 98 49 2 66 161 79 175 1.85e-27 101
Msa1218740 AT4G24972.1 46.316 95 48 2 67 159 77 170 1.16e-24 94.4

Find 48 sgRNAs with CRISPR-Local

Find 136 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATAAATTTAGGTCAATTT+TGG 0.161227 8_1:+81385501 Msa1218740:three_prime_UTR
TGTAAACCATCAATAAATTT+AGG 0.223197 8_1:+81385491 Msa1218740:three_prime_UTR
ATGATTTGACTAGAGGTTAA+AGG 0.240600 8_1:-81385109 None:intergenic
GATAGTCTCTTGAACAAGTT+AGG 0.283613 8_1:-81385055 None:intergenic
GATTGATGGTGAAGTTGTTT+TGG 0.296717 8_1:-81384429 None:intergenic
AATTGACCTAAATTTATTGA+TGG 0.321862 8_1:-81385497 None:intergenic
TTCATTTCACTGTTCTTAGT+TGG 0.345673 8_1:+81385297 Msa1218740:three_prime_UTR
ACAATTTGCACTACATACTT+AGG 0.355175 8_1:-81384950 None:intergenic
CAGTGAAGGTGGATATTATA+TGG 0.374593 8_1:-81385001 None:intergenic
AGCAATGTTGAAATACATTC+AGG 0.391870 8_1:+81384578 Msa1218740:CDS
CGCATGTTAGCATAGCATTC+CGG 0.400052 8_1:+81385330 Msa1218740:three_prime_UTR
CAAAGTAGAGAGACTCTAAC+TGG 0.402226 8_1:+81384923 Msa1218740:CDS
TATTTGTATTTGTGGATTTG+TGG 0.404060 8_1:-81384466 None:intergenic
GTGTGCATGTTCTGCTTTCA+CGG 0.419030 8_1:-81384748 None:intergenic
TTTGATGATTGTTTGGTGAA+TGG 0.424865 8_1:+81385079 Msa1218740:CDS
AAGAGGATAAACAAAAGAAT+TGG 0.440347 8_1:-81385146 None:intergenic
CAATTTGCACTACATACTTA+GGG 0.446648 8_1:-81384949 None:intergenic
ACCATGCCATGAAAATTTAG+TGG 0.450215 8_1:-81384778 None:intergenic
TAAAGAGAATGATGGATTGA+TGG 0.452018 8_1:-81384443 None:intergenic
ATATCCACCTTCACTGTGGC+TGG 0.466175 8_1:+81385008 Msa1218740:CDS
GAATGCAAAATCTGTGTTGA+AGG 0.471618 8_1:-81384690 None:intergenic
GCATCGACACTTCAGATTGA+AGG 0.501131 8_1:+81385370 Msa1218740:three_prime_UTR
ATAGTCTCTTGAACAAGTTA+GGG 0.506632 8_1:-81385054 None:intergenic
CTGTTCTTAGTTGGAAAATG+TGG 0.507540 8_1:+81385306 Msa1218740:three_prime_UTR
GAGAGAGTAGAGACTGAGAC+TGG 0.524939 8_1:-81384388 None:intergenic
AGTGATAGTCATATTAGTTG+TGG 0.526740 8_1:-81384507 None:intergenic
TGAAGCAGAGGAAGAACAGA+GGG 0.544265 8_1:-81384538 None:intergenic
TTCATCTTTAAGAGAACTTG+TGG 0.548535 8_1:-81385557 None:intergenic
AGATGAAACGATGCAAGGAA+TGG 0.552456 8_1:+81385573 Msa1218740:three_prime_UTR
ATTTGTGGTAAAGAGAATGA+TGG 0.555282 8_1:-81384451 None:intergenic
TCTTTCAATGAAGACAGAAA+CGG 0.559717 8_1:+81384711 Msa1218740:CDS
GAATCTAATGATTTGACTAG+AGG 0.560845 8_1:-81385116 None:intergenic
CAAACCAGCCACAGTGAAGG+TGG 0.574734 8_1:-81385012 None:intergenic
TTGGCAGACTTGAGTGCAAG+AGG 0.575548 8_1:-81385163 None:intergenic
GATGATTGTTTGGTGAATGG+AGG 0.585298 8_1:+81385082 Msa1218740:CDS
AATGCAAAATCTGTGTTGAA+GGG 0.592176 8_1:-81384689 None:intergenic
GCTACATAGTTTGTGAACTC+CGG 0.593381 8_1:-81385349 None:intergenic
CTTAAAGATGAAACGATGCA+AGG 0.602394 8_1:+81385568 Msa1218740:three_prime_UTR
TCAACATTGCTAAGCACAAG+GGG 0.606698 8_1:-81384566 None:intergenic
ATGAAGCAGAGGAAGAACAG+AGG 0.607052 8_1:-81384539 None:intergenic
TTCAACATTGCTAAGCACAA+GGG 0.607430 8_1:-81384567 None:intergenic
AACATTGCTAAGCACAAGGG+GGG 0.613965 8_1:-81384564 None:intergenic
TTTCAACATTGCTAAGCACA+AGG 0.617257 8_1:-81384568 None:intergenic
AATGAGACAAATGTAACACT+TGG 0.626364 8_1:-81385596 None:intergenic
AAGCAAACCAGCCACAGTGA+AGG 0.638291 8_1:-81385015 None:intergenic
CAACATTGCTAAGCACAAGG+GGG 0.674413 8_1:-81384565 None:intergenic
TATAATATCCACCTTCACTG+TGG 0.711676 8_1:+81385004 Msa1218740:CDS
GAAGCAGAGGAAGAACAGAG+GGG 0.773738 8_1:-81384537 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTTGGTTTTGATT+AGG + chr8_1:81384869-81384888 Msa1218740:intron 15.0%
!! TCAAAATAGAATTGAAAAAA+AGG + chr8_1:81385622-81385641 Msa1218740:three_prime_UTR 15.0%
!!! ATTTATTTTTGGTTTTGATT+AGG + chr8_1:81384869-81384888 Msa1218740:intron 15.0%
!! TCAAAATAGAATTGAAAAAA+AGG + chr8_1:81385622-81385641 Msa1218740:three_prime_UTR 15.0%
!!! CTATCTTTTATTTGTATTTG+TGG - chr8_1:81384477-81384496 None:intergenic 20.0%
!! CAAAAATAAATAATCATCTC+AGG - chr8_1:81384860-81384879 None:intergenic 20.0%
!!! CTGAGATGATTATTTATTTT+TGG + chr8_1:81384858-81384877 Msa1218740:intron 20.0%
!!! TTTTTTGCAAGAAAATCTAT+CGG - chr8_1:81385214-81385233 None:intergenic 20.0%
!! AAAAAAAGAATTCATAACAC+AGG + chr8_1:81385240-81385259 Msa1218740:three_prime_UTR 20.0%
!! TGTAAACCATCAATAAATTT+AGG + chr8_1:81385491-81385510 Msa1218740:three_prime_UTR 20.0%
!! AATTGACCTAAATTTATTGA+TGG - chr8_1:81385500-81385519 None:intergenic 20.0%
!!! CAATAAATTTAGGTCAATTT+TGG + chr8_1:81385501-81385520 Msa1218740:three_prime_UTR 20.0%
!!! CTATCTTTTATTTGTATTTG+TGG - chr8_1:81384477-81384496 None:intergenic 20.0%
!! CAAAAATAAATAATCATCTC+AGG - chr8_1:81384860-81384879 None:intergenic 20.0%
!!! CTGAGATGATTATTTATTTT+TGG + chr8_1:81384858-81384877 Msa1218740:intron 20.0%
!!! TTTTTTGCAAGAAAATCTAT+CGG - chr8_1:81385214-81385233 None:intergenic 20.0%
!! AAAAAAAGAATTCATAACAC+AGG + chr8_1:81385240-81385259 Msa1218740:three_prime_UTR 20.0%
!! TGTAAACCATCAATAAATTT+AGG + chr8_1:81385491-81385510 Msa1218740:three_prime_UTR 20.0%
!! AATTGACCTAAATTTATTGA+TGG - chr8_1:81385500-81385519 None:intergenic 20.0%
!!! CAATAAATTTAGGTCAATTT+TGG + chr8_1:81385501-81385520 Msa1218740:three_prime_UTR 20.0%
! TATTTGTATTTGTGGATTTG+TGG - chr8_1:81384469-81384488 None:intergenic 25.0%
!! TCTCAGGTTTAGAATATAAA+AGG - chr8_1:81384844-81384863 None:intergenic 25.0%
!!! ACTATCTTTTGATGATTGTT+TGG + chr8_1:81385072-81385091 Msa1218740:CDS 25.0%
! AAGAGGATAAACAAAAGAAT+TGG - chr8_1:81385149-81385168 None:intergenic 25.0%
!! TTTTTGCAAGAAAATCTATC+GGG - chr8_1:81385213-81385232 None:intergenic 25.0%
! TATTTGTATTTGTGGATTTG+TGG - chr8_1:81384469-81384488 None:intergenic 25.0%
!! TCTCAGGTTTAGAATATAAA+AGG - chr8_1:81384844-81384863 None:intergenic 25.0%
!!! ACTATCTTTTGATGATTGTT+TGG + chr8_1:81385072-81385091 Msa1218740:CDS 25.0%
! AAGAGGATAAACAAAAGAAT+TGG - chr8_1:81385149-81385168 None:intergenic 25.0%
!! TTTTTGCAAGAAAATCTATC+GGG - chr8_1:81385213-81385232 None:intergenic 25.0%
!! TAAAGAGAATGATGGATTGA+TGG - chr8_1:81384446-81384465 None:intergenic 30.0%
ATTTGTGGTAAAGAGAATGA+TGG - chr8_1:81384454-81384473 None:intergenic 30.0%
AGTGATAGTCATATTAGTTG+TGG - chr8_1:81384510-81384529 None:intergenic 30.0%
AGCAATGTTGAAATACATTC+AGG + chr8_1:81384578-81384597 Msa1218740:CDS 30.0%
ATGTTTATCATTGTGTTAGC+AGG + chr8_1:81384666-81384685 Msa1218740:intron 30.0%
AATGCAAAATCTGTGTTGAA+GGG - chr8_1:81384692-81384711 None:intergenic 30.0%
TCTTTCAATGAAGACAGAAA+CGG + chr8_1:81384711-81384730 Msa1218740:CDS 30.0%
! CTACTTCCACTAAATTTTCA+TGG + chr8_1:81384772-81384791 Msa1218740:CDS 30.0%
CAATTTGCACTACATACTTA+GGG - chr8_1:81384952-81384971 None:intergenic 30.0%
ACAATTTGCACTACATACTT+AGG - chr8_1:81384953-81384972 None:intergenic 30.0%
ATAGTCTCTTGAACAAGTTA+GGG - chr8_1:81385057-81385076 None:intergenic 30.0%
! TTTGATGATTGTTTGGTGAA+TGG + chr8_1:81385079-81385098 Msa1218740:CDS 30.0%
ATGATTTGACTAGAGGTTAA+AGG - chr8_1:81385112-81385131 None:intergenic 30.0%
GAATCTAATGATTTGACTAG+AGG - chr8_1:81385119-81385138 None:intergenic 30.0%
!! AATCTATCGGGACTATTTTT+CGG - chr8_1:81385201-81385220 None:intergenic 30.0%
TTCATTTCACTGTTCTTAGT+TGG + chr8_1:81385297-81385316 Msa1218740:three_prime_UTR 30.0%
!!! TTGGAAGTTCCATGTTTTTT+AGG + chr8_1:81385520-81385539 Msa1218740:three_prime_UTR 30.0%
! TTCATCTTTAAGAGAACTTG+TGG - chr8_1:81385560-81385579 None:intergenic 30.0%
AATGAGACAAATGTAACACT+TGG - chr8_1:81385599-81385618 None:intergenic 30.0%
!! TAAAGAGAATGATGGATTGA+TGG - chr8_1:81384446-81384465 None:intergenic 30.0%
ATTTGTGGTAAAGAGAATGA+TGG - chr8_1:81384454-81384473 None:intergenic 30.0%
AGTGATAGTCATATTAGTTG+TGG - chr8_1:81384510-81384529 None:intergenic 30.0%
AGCAATGTTGAAATACATTC+AGG + chr8_1:81384578-81384597 Msa1218740:CDS 30.0%
ATGTTTATCATTGTGTTAGC+AGG + chr8_1:81384666-81384685 Msa1218740:intron 30.0%
AATGCAAAATCTGTGTTGAA+GGG - chr8_1:81384692-81384711 None:intergenic 30.0%
TCTTTCAATGAAGACAGAAA+CGG + chr8_1:81384711-81384730 Msa1218740:CDS 30.0%
! CTACTTCCACTAAATTTTCA+TGG + chr8_1:81384772-81384791 Msa1218740:CDS 30.0%
CAATTTGCACTACATACTTA+GGG - chr8_1:81384952-81384971 None:intergenic 30.0%
ACAATTTGCACTACATACTT+AGG - chr8_1:81384953-81384972 None:intergenic 30.0%
ATAGTCTCTTGAACAAGTTA+GGG - chr8_1:81385057-81385076 None:intergenic 30.0%
! TTTGATGATTGTTTGGTGAA+TGG + chr8_1:81385079-81385098 Msa1218740:CDS 30.0%
ATGATTTGACTAGAGGTTAA+AGG - chr8_1:81385112-81385131 None:intergenic 30.0%
GAATCTAATGATTTGACTAG+AGG - chr8_1:81385119-81385138 None:intergenic 30.0%
!! AATCTATCGGGACTATTTTT+CGG - chr8_1:81385201-81385220 None:intergenic 30.0%
TTCATTTCACTGTTCTTAGT+TGG + chr8_1:81385297-81385316 Msa1218740:three_prime_UTR 30.0%
!!! TTGGAAGTTCCATGTTTTTT+AGG + chr8_1:81385520-81385539 Msa1218740:three_prime_UTR 30.0%
! TTCATCTTTAAGAGAACTTG+TGG - chr8_1:81385560-81385579 None:intergenic 30.0%
AATGAGACAAATGTAACACT+TGG - chr8_1:81385599-81385618 None:intergenic 30.0%
!!! GATTGATGGTGAAGTTGTTT+TGG - chr8_1:81384432-81384451 None:intergenic 35.0%
TTCAACATTGCTAAGCACAA+GGG - chr8_1:81384570-81384589 None:intergenic 35.0%
TTTCAACATTGCTAAGCACA+AGG - chr8_1:81384571-81384590 None:intergenic 35.0%
GAATGCAAAATCTGTGTTGA+AGG - chr8_1:81384693-81384712 None:intergenic 35.0%
! TCCACTAAATTTTCATGGCA+TGG + chr8_1:81384777-81384796 Msa1218740:CDS 35.0%
ACCATGCCATGAAAATTTAG+TGG - chr8_1:81384781-81384800 None:intergenic 35.0%
CAGTGAAGGTGGATATTATA+TGG - chr8_1:81385004-81385023 None:intergenic 35.0%
TATAATATCCACCTTCACTG+TGG + chr8_1:81385004-81385023 Msa1218740:CDS 35.0%
GATAGTCTCTTGAACAAGTT+AGG - chr8_1:81385058-81385077 None:intergenic 35.0%
! TTTTCGGAGTCAGCAAAATT+TGG - chr8_1:81385185-81385204 None:intergenic 35.0%
CTGTTCTTAGTTGGAAAATG+TGG + chr8_1:81385306-81385325 Msa1218740:three_prime_UTR 35.0%
!!! TCCATGTTTTTTAGGCTATG+TGG + chr8_1:81385528-81385547 Msa1218740:three_prime_UTR 35.0%
ACCACATAGCCTAAAAAACA+TGG - chr8_1:81385532-81385551 None:intergenic 35.0%
!!! TTTTTTAGGCTATGTGGTTG+AGG + chr8_1:81385534-81385553 Msa1218740:three_prime_UTR 35.0%
CTTAAAGATGAAACGATGCA+AGG + chr8_1:81385568-81385587 Msa1218740:three_prime_UTR 35.0%
!!! GATTGATGGTGAAGTTGTTT+TGG - chr8_1:81384432-81384451 None:intergenic 35.0%
TTCAACATTGCTAAGCACAA+GGG - chr8_1:81384570-81384589 None:intergenic 35.0%
TTTCAACATTGCTAAGCACA+AGG - chr8_1:81384571-81384590 None:intergenic 35.0%
GAATGCAAAATCTGTGTTGA+AGG - chr8_1:81384693-81384712 None:intergenic 35.0%
! TCCACTAAATTTTCATGGCA+TGG + chr8_1:81384777-81384796 Msa1218740:CDS 35.0%
ACCATGCCATGAAAATTTAG+TGG - chr8_1:81384781-81384800 None:intergenic 35.0%
CAGTGAAGGTGGATATTATA+TGG - chr8_1:81385004-81385023 None:intergenic 35.0%
TATAATATCCACCTTCACTG+TGG + chr8_1:81385004-81385023 Msa1218740:CDS 35.0%
GATAGTCTCTTGAACAAGTT+AGG - chr8_1:81385058-81385077 None:intergenic 35.0%
! TTTTCGGAGTCAGCAAAATT+TGG - chr8_1:81385185-81385204 None:intergenic 35.0%
CTGTTCTTAGTTGGAAAATG+TGG + chr8_1:81385306-81385325 Msa1218740:three_prime_UTR 35.0%
!!! TCCATGTTTTTTAGGCTATG+TGG + chr8_1:81385528-81385547 Msa1218740:three_prime_UTR 35.0%
ACCACATAGCCTAAAAAACA+TGG - chr8_1:81385532-81385551 None:intergenic 35.0%
!!! TTTTTTAGGCTATGTGGTTG+AGG + chr8_1:81385534-81385553 Msa1218740:three_prime_UTR 35.0%
CTTAAAGATGAAACGATGCA+AGG + chr8_1:81385568-81385587 Msa1218740:three_prime_UTR 35.0%
TCAACATTGCTAAGCACAAG+GGG - chr8_1:81384569-81384588 None:intergenic 40.0%
CAAAGTAGAGAGACTCTAAC+TGG + chr8_1:81384923-81384942 Msa1218740:CDS 40.0%
! GATGATTGTTTGGTGAATGG+AGG + chr8_1:81385082-81385101 Msa1218740:CDS 40.0%
! GCTACATAGTTTGTGAACTC+CGG - chr8_1:81385352-81385371 None:intergenic 40.0%
AGATGAAACGATGCAAGGAA+TGG + chr8_1:81385573-81385592 Msa1218740:three_prime_UTR 40.0%
TCAACATTGCTAAGCACAAG+GGG - chr8_1:81384569-81384588 None:intergenic 40.0%
CAAAGTAGAGAGACTCTAAC+TGG + chr8_1:81384923-81384942 Msa1218740:CDS 40.0%
! GATGATTGTTTGGTGAATGG+AGG + chr8_1:81385082-81385101 Msa1218740:CDS 40.0%
! GCTACATAGTTTGTGAACTC+CGG - chr8_1:81385352-81385371 None:intergenic 40.0%
AGATGAAACGATGCAAGGAA+TGG + chr8_1:81385573-81385592 Msa1218740:three_prime_UTR 40.0%
TGAAGCAGAGGAAGAACAGA+GGG - chr8_1:81384541-81384560 None:intergenic 45.0%
ATGAAGCAGAGGAAGAACAG+AGG - chr8_1:81384542-81384561 None:intergenic 45.0%
AACATTGCTAAGCACAAGGG+GGG - chr8_1:81384567-81384586 None:intergenic 45.0%
CAACATTGCTAAGCACAAGG+GGG - chr8_1:81384568-81384587 None:intergenic 45.0%
GTGTGCATGTTCTGCTTTCA+CGG - chr8_1:81384751-81384770 None:intergenic 45.0%
CGCATGTTAGCATAGCATTC+CGG + chr8_1:81385330-81385349 Msa1218740:three_prime_UTR 45.0%
! GCATCGACACTTCAGATTGA+AGG + chr8_1:81385370-81385389 Msa1218740:three_prime_UTR 45.0%
TGAAGCAGAGGAAGAACAGA+GGG - chr8_1:81384541-81384560 None:intergenic 45.0%
ATGAAGCAGAGGAAGAACAG+AGG - chr8_1:81384542-81384561 None:intergenic 45.0%
AACATTGCTAAGCACAAGGG+GGG - chr8_1:81384567-81384586 None:intergenic 45.0%
CAACATTGCTAAGCACAAGG+GGG - chr8_1:81384568-81384587 None:intergenic 45.0%
GTGTGCATGTTCTGCTTTCA+CGG - chr8_1:81384751-81384770 None:intergenic 45.0%
CGCATGTTAGCATAGCATTC+CGG + chr8_1:81385330-81385349 Msa1218740:three_prime_UTR 45.0%
! GCATCGACACTTCAGATTGA+AGG + chr8_1:81385370-81385389 Msa1218740:three_prime_UTR 45.0%
GAGAGAGTAGAGACTGAGAC+TGG - chr8_1:81384391-81384410 None:intergenic 50.0%
GAAGCAGAGGAAGAACAGAG+GGG - chr8_1:81384540-81384559 None:intergenic 50.0%
ATATCCACCTTCACTGTGGC+TGG + chr8_1:81385008-81385027 Msa1218740:CDS 50.0%
AAGCAAACCAGCCACAGTGA+AGG - chr8_1:81385018-81385037 None:intergenic 50.0%
TTGGCAGACTTGAGTGCAAG+AGG - chr8_1:81385166-81385185 None:intergenic 50.0%
GAGAGAGTAGAGACTGAGAC+TGG - chr8_1:81384391-81384410 None:intergenic 50.0%
GAAGCAGAGGAAGAACAGAG+GGG - chr8_1:81384540-81384559 None:intergenic 50.0%
ATATCCACCTTCACTGTGGC+TGG + chr8_1:81385008-81385027 Msa1218740:CDS 50.0%
AAGCAAACCAGCCACAGTGA+AGG - chr8_1:81385018-81385037 None:intergenic 50.0%
TTGGCAGACTTGAGTGCAAG+AGG - chr8_1:81385166-81385185 None:intergenic 50.0%
CAAGGGGGGTTATGAAGCAG+AGG - chr8_1:81384553-81384572 None:intergenic 55.0%
CAAACCAGCCACAGTGAAGG+TGG - chr8_1:81385015-81385034 None:intergenic 55.0%
CAAGGGGGGTTATGAAGCAG+AGG - chr8_1:81384553-81384572 None:intergenic 55.0%
CAAACCAGCCACAGTGAAGG+TGG - chr8_1:81385015-81385034 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 81384386 81385666 81384386 ID=Msa1218740;Name=Msa1218740
chr8_1 mRNA 81384386 81385666 81384386 ID=Msa1218740-mRNA-1;Parent=Msa1218740;Name=Msa1218740-mRNA-1;_AED=0.03;_eAED=0.03;_QI=132|1|1|1|1|1|3|471|165
chr8_1 exon 81384386 81384599 81384386 ID=Msa1218740-mRNA-1:exon:28741;Parent=Msa1218740-mRNA-1
chr8_1 exon 81384688 81384798 81384688 ID=Msa1218740-mRNA-1:exon:28742;Parent=Msa1218740-mRNA-1
chr8_1 exon 81384891 81385666 81384891 ID=Msa1218740-mRNA-1:exon:28743;Parent=Msa1218740-mRNA-1
chr8_1 five_prime_UTR 81384386 81384517 81384386 ID=Msa1218740-mRNA-1:five_prime_utr;Parent=Msa1218740-mRNA-1
chr8_1 CDS 81384518 81384599 81384518 ID=Msa1218740-mRNA-1:cds;Parent=Msa1218740-mRNA-1
chr8_1 CDS 81384688 81384798 81384688 ID=Msa1218740-mRNA-1:cds;Parent=Msa1218740-mRNA-1
chr8_1 CDS 81384891 81385195 81384891 ID=Msa1218740-mRNA-1:cds;Parent=Msa1218740-mRNA-1
chr8_1 three_prime_UTR 81385196 81385666 81385196 ID=Msa1218740-mRNA-1:three_prime_utr;Parent=Msa1218740-mRNA-1
Gene Sequence

>Msa1218740

ATGACTATCACTAACTACACCCCTCTGTTCTTCCTCTGCTTCATAACCCCCCTTGTGCTTAGCAATGTTGAAATACATTCAGGCCCTTCAACACAGATTTTGCATTCTTTCAATGAAGACAGAAACGGCTCTATAACACTGTCCGTGAAAGCAGAACATGCACACTCTACTTCCACTAAATTTTCATGGCATGGTTCTTGCACAAACAAAGACATAAGCATTTCACAAAGTAGAGAGACTCTAACTGGAATCCCTAAGTATGTAGTGCAAATTGTCAATACTTGTGTTTCTTCTGAGTGTGCTCCATATAATATCCACCTTCACTGTGGCTGGTTTGCTTCTGCAAGAATAATCAACCCTAACTTGTTCAAGAGACTATCTTTTGATGATTGTTTGGTGAATGGAGGAAAACCTTTAACCTCTAGTCAAATCATTAGATTCACTTATACCAATTCTTTTGTTTATCCTCTTGCACTCAAGTCTGCCAAATTTTGCTGA

Protein sequence

>Msa1218740

MTITNYTPLFFLCFITPLVLSNVEIHSGPSTQILHSFNEDRNGSITLSVKAEHAHSTSTKFSWHGSCTNKDISISQSRETLTGIPKYVVQIVNTCVSSECAPYNIHLHCGWFASARIINPNLFKRLSFDDCLVNGGKPLTSSQIIRFTYTNSFVYPLALKSAKFC*