Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0887440 | XP_013452196.1 | 84.547 | 453 | 23 | 3 | 1 | 407 | 1 | 452 | 0.0 | 683 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0887440 | sp|O31634|YJCL_BACSU | 27.919 | 394 | 208 | 8 | 77 | 400 | 2 | 389 | 1.76e-37 | 143 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0887440 | A0A072U8V4 | 84.547 | 453 | 23 | 3 | 1 | 407 | 1 | 452 | 0.0 | 683 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001510 | Msa0887440 | 0.811346 | 7.330957e-51 | -8.615850e-47 |
| Msa0002690 | Msa0887440 | 0.818501 | 1.896626e-52 | -8.615850e-47 |
| Msa0002700 | Msa0887440 | 0.810909 | 9.116452e-51 | -8.615850e-47 |
| Msa0004180 | Msa0887440 | 0.819726 | 9.980967e-53 | -8.615850e-47 |
| Msa0018610 | Msa0887440 | 0.824171 | 9.328369e-54 | -8.615850e-47 |
| Msa0021570 | Msa0887440 | 0.814447 | 1.533281e-51 | -8.615850e-47 |
| Msa0024070 | Msa0887440 | 0.831633 | 1.494080e-55 | -8.615850e-47 |
| Msa0027020 | Msa0887440 | 0.815716 | 8.014914e-52 | -8.615850e-47 |
| Msa0028940 | Msa0887440 | 0.801517 | 8.673725e-49 | -8.615850e-47 |
| Msa0047400 | Msa0887440 | 0.800290 | 1.545070e-48 | -8.615850e-47 |
| Msa0052180 | Msa0887440 | 0.808657 | 2.781516e-50 | -8.615850e-47 |
| Msa0064490 | Msa0887440 | 0.802074 | 6.666023e-49 | -8.615850e-47 |
| Msa0075080 | Msa0887440 | 0.835097 | 2.045666e-56 | -8.615850e-47 |
| Msa0076590 | Msa0887440 | 0.818814 | 1.610644e-52 | -8.615850e-47 |
| Msa0076990 | Msa0887440 | 0.801139 | 1.036691e-48 | -8.615850e-47 |
| Msa0077990 | Msa0887440 | 0.809357 | 1.969189e-50 | -8.615850e-47 |
| Msa0079100 | Msa0887440 | 0.822070 | 2.884145e-53 | -8.615850e-47 |
| Msa0079520 | Msa0887440 | -0.804083 | 2.560570e-49 | -8.615850e-47 |
| Msa0093360 | Msa0887440 | 0.811712 | 6.104175e-51 | -8.615850e-47 |
| Msa0102290 | Msa0887440 | 0.825837 | 3.770323e-54 | -8.615850e-47 |
| Msa0116780 | Msa0887440 | 0.809016 | 2.330218e-50 | -8.615850e-47 |
| Msa0118700 | Msa0887440 | 0.820086 | 8.260717e-53 | -8.615850e-47 |
| Msa0120100 | Msa0887440 | 0.801473 | 8.857484e-49 | -8.615850e-47 |
| Msa0605210 | Msa0887440 | 0.810734 | 9.948734e-51 | -8.615850e-47 |
| Msa0606340 | Msa0887440 | 0.806198 | 9.242123e-50 | -8.615850e-47 |
| Msa0606350 | Msa0887440 | 0.822310 | 2.536589e-53 | -8.615850e-47 |
| Msa0607070 | Msa0887440 | 0.821921 | 3.121324e-53 | -8.615850e-47 |
| Msa0608720 | Msa0887440 | 0.820748 | 5.821483e-53 | -8.615850e-47 |
| Msa0612950 | Msa0887440 | 0.803234 | 3.841718e-49 | -8.615850e-47 |
| Msa0616570 | Msa0887440 | 0.808469 | 3.049552e-50 | -8.615850e-47 |
| Msa0619960 | Msa0887440 | 0.823022 | 1.732452e-53 | -8.615850e-47 |
| Msa0620050 | Msa0887440 | 0.821305 | 4.333970e-53 | -8.615850e-47 |
| Msa0623350 | Msa0887440 | 0.816963 | 4.217878e-52 | -8.615850e-47 |
| Msa0625820 | Msa0887440 | 0.831467 | 1.641908e-55 | -8.615850e-47 |
| Msa0630910 | Msa0887440 | 0.806998 | 6.264445e-50 | -8.615850e-47 |
| Msa0639040 | Msa0887440 | 0.809212 | 2.115227e-50 | -8.615850e-47 |
| Msa0644610 | Msa0887440 | 0.824034 | 1.004473e-53 | -8.615850e-47 |
| Msa0646310 | Msa0887440 | 0.809897 | 1.507876e-50 | -8.615850e-47 |
| Msa0649140 | Msa0887440 | 0.836217 | 1.065321e-56 | -8.615850e-47 |
| Msa0649160 | Msa0887440 | 0.817644 | 2.963047e-52 | -8.615850e-47 |
| Msa0687650 | Msa0887440 | 0.816544 | 5.236543e-52 | -8.615850e-47 |
| Msa0687740 | Msa0887440 | 0.818179 | 2.243185e-52 | -8.615850e-47 |
| Msa0689980 | Msa0887440 | 0.804669 | 1.933534e-49 | -8.615850e-47 |
| Msa0697610 | Msa0887440 | 0.805400 | 1.359396e-49 | -8.615850e-47 |
| Msa0699900 | Msa0887440 | 0.806831 | 6.795555e-50 | -8.615850e-47 |
| Msa0729740 | Msa0887440 | 0.812383 | 4.359216e-51 | -8.615850e-47 |
| Msa0739820 | Msa0887440 | 0.851058 | 1.136585e-60 | -8.615850e-47 |
| Msa0745270 | Msa0887440 | 0.834650 | 2.651545e-56 | -8.615850e-47 |
| Msa0748470 | Msa0887440 | 0.832819 | 7.603447e-56 | -8.615850e-47 |
| Msa0755550 | Msa0887440 | 0.801140 | 1.036075e-48 | -8.615850e-47 |
| Msa0762900 | Msa0887440 | 0.807006 | 6.241379e-50 | -8.615850e-47 |
| Msa0772530 | Msa0887440 | 0.824482 | 7.879438e-54 | -8.615850e-47 |
| Msa0784780 | Msa0887440 | 0.814081 | 1.847307e-51 | -8.615850e-47 |
| Msa0828730 | Msa0887440 | 0.821580 | 3.743981e-53 | -8.615850e-47 |
| Msa0829210 | Msa0887440 | 0.819150 | 1.350528e-52 | -8.615850e-47 |
| Msa0837040 | Msa0887440 | 0.803001 | 4.292495e-49 | -8.615850e-47 |
| Msa0122930 | Msa0887440 | 0.819263 | 1.272791e-52 | -8.615850e-47 |
| Msa0127510 | Msa0887440 | 0.813829 | 2.099735e-51 | -8.615850e-47 |
| Msa0145590 | Msa0887440 | 0.803379 | 3.585321e-49 | -8.615850e-47 |
| Msa0147070 | Msa0887440 | 0.826027 | 3.397142e-54 | -8.615850e-47 |
| Msa0164530 | Msa0887440 | 0.800328 | 1.517443e-48 | -8.615850e-47 |
| Msa0167160 | Msa0887440 | 0.805706 | 1.172571e-49 | -8.615850e-47 |
| Msa0167570 | Msa0887440 | 0.828433 | 9.015684e-55 | -8.615850e-47 |
| Msa0168470 | Msa0887440 | 0.812118 | 4.980245e-51 | -8.615850e-47 |
| Msa0170550 | Msa0887440 | 0.823627 | 1.250792e-53 | -8.615850e-47 |
| Msa0174510 | Msa0887440 | 0.818231 | 2.183968e-52 | -8.615850e-47 |
| Msa0182940 | Msa0887440 | 0.852338 | 4.928501e-61 | -8.615850e-47 |
| Msa0185770 | Msa0887440 | 0.814779 | 1.295023e-51 | -8.615850e-47 |
| Msa0211590 | Msa0887440 | 0.853049 | 3.088212e-61 | -8.615850e-47 |
| Msa0232160 | Msa0887440 | 0.803789 | 2.948384e-49 | -8.615850e-47 |
| Msa0237690 | Msa0887440 | 0.850265 | 1.898499e-60 | -8.615850e-47 |
| Msa0367380 | Msa0887440 | 0.811199 | 7.889736e-51 | -8.615850e-47 |
| Msa0368210 | Msa0887440 | 0.845560 | 3.764227e-59 | -8.615850e-47 |
| Msa0371050 | Msa0887440 | 0.835673 | 1.463041e-56 | -8.615850e-47 |
| Msa0373640 | Msa0887440 | 0.815183 | 1.053271e-51 | -8.615850e-47 |
| Msa0377990 | Msa0887440 | 0.833617 | 4.810521e-56 | -8.615850e-47 |
| Msa0379360 | Msa0887440 | 0.805466 | 1.317005e-49 | -8.615850e-47 |
| Msa0380470 | Msa0887440 | 0.819372 | 1.202360e-52 | -8.615850e-47 |
| Msa0382050 | Msa0887440 | 0.836764 | 7.729928e-57 | -8.615850e-47 |
| Msa0384140 | Msa0887440 | 0.805911 | 1.061818e-49 | -8.615850e-47 |
| Msa0386310 | Msa0887440 | 0.812068 | 5.106692e-51 | -8.615850e-47 |
| Msa0388000 | Msa0887440 | 0.809481 | 1.852444e-50 | -8.615850e-47 |
| Msa0397420 | Msa0887440 | 0.820770 | 5.753667e-53 | -8.615850e-47 |
| Msa0402490 | Msa0887440 | 0.833332 | 5.667587e-56 | -8.615850e-47 |
| Msa0415860 | Msa0887440 | 0.804658 | 1.943439e-49 | -8.615850e-47 |
| Msa0427230 | Msa0887440 | 0.803425 | 3.507386e-49 | -8.615850e-47 |
| Msa0427600 | Msa0887440 | 0.813562 | 2.403761e-51 | -8.615850e-47 |
| Msa0428870 | Msa0887440 | 0.814035 | 1.891366e-51 | -8.615850e-47 |
| Msa0429990 | Msa0887440 | 0.813022 | 3.159076e-51 | -8.615850e-47 |
| Msa0431550 | Msa0887440 | 0.831293 | 1.812439e-55 | -8.615850e-47 |
| Msa0432490 | Msa0887440 | 0.818828 | 1.599040e-52 | -8.615850e-47 |
| Msa0433890 | Msa0887440 | 0.805721 | 1.164371e-49 | -8.615850e-47 |
| Msa0434320 | Msa0887440 | 0.807820 | 4.194116e-50 | -8.615850e-47 |
| Msa0436430 | Msa0887440 | 0.823194 | 1.579281e-53 | -8.615850e-47 |
| Msa0436660 | Msa0887440 | 0.831813 | 1.349446e-55 | -8.615850e-47 |
| Msa0439090 | Msa0887440 | 0.828035 | 1.124664e-54 | -8.615850e-47 |
| Msa0439130 | Msa0887440 | 0.839469 | 1.555172e-57 | -8.615850e-47 |
| Msa0444770 | Msa0887440 | 0.805435 | 1.336813e-49 | -8.615850e-47 |
| Msa0446110 | Msa0887440 | 0.837989 | 3.752424e-57 | -8.615850e-47 |
| Msa0450880 | Msa0887440 | 0.801123 | 1.044430e-48 | -8.615850e-47 |
| Msa0461150 | Msa0887440 | 0.826688 | 2.364666e-54 | -8.615850e-47 |
| Msa0469770 | Msa0887440 | 0.807616 | 4.634434e-50 | -8.615850e-47 |
| Msa0473740 | Msa0887440 | 0.804878 | 1.748097e-49 | -8.615850e-47 |
| Msa0474630 | Msa0887440 | 0.817967 | 2.505799e-52 | -8.615850e-47 |
| Msa0475080 | Msa0887440 | 0.800624 | 1.320550e-48 | -8.615850e-47 |
| Msa0476560 | Msa0887440 | 0.816221 | 6.183304e-52 | -8.615850e-47 |
| Msa0476890 | Msa0887440 | 0.818468 | 1.929837e-52 | -8.615850e-47 |
| Msa0480040 | Msa0887440 | 0.821382 | 4.158642e-53 | -8.615850e-47 |
| Msa0480090 | Msa0887440 | 0.810743 | 9.902380e-51 | -8.615850e-47 |
| Msa0480100 | Msa0887440 | 0.822314 | 2.531461e-53 | -8.615850e-47 |
| Msa0252150 | Msa0887440 | 0.837281 | 5.701310e-57 | -8.615850e-47 |
| Msa0266330 | Msa0887440 | 0.806792 | 6.924351e-50 | -8.615850e-47 |
| Msa0275260 | Msa0887440 | 0.806371 | 8.498525e-50 | -8.615850e-47 |
| Msa0284980 | Msa0887440 | 0.808535 | 2.952319e-50 | -8.615850e-47 |
| Msa0288300 | Msa0887440 | 0.812615 | 3.878775e-51 | -8.615850e-47 |
| Msa0307820 | Msa0887440 | 0.805523 | 1.281377e-49 | -8.615850e-47 |
| Msa0310270 | Msa0887440 | 0.806432 | 8.249709e-50 | -8.615850e-47 |
| Msa0341950 | Msa0887440 | 0.811420 | 7.065303e-51 | -8.615850e-47 |
| Msa0363090 | Msa0887440 | 0.817453 | 3.272078e-52 | -8.615850e-47 |
| Msa0492330 | Msa0887440 | 0.812439 | 4.236446e-51 | -8.615850e-47 |
| Msa0500580 | Msa0887440 | 0.820052 | 8.410607e-53 | -8.615850e-47 |
| Msa0506700 | Msa0887440 | 0.802960 | 4.377522e-49 | -8.615850e-47 |
| Msa0517820 | Msa0887440 | 0.824606 | 7.370225e-54 | -8.615850e-47 |
| Msa0518150 | Msa0887440 | 0.811066 | 8.429667e-51 | -8.615850e-47 |
| Msa0519100 | Msa0887440 | 0.820271 | 7.490694e-53 | -8.615850e-47 |
| Msa0521840 | Msa0887440 | 0.812123 | 4.967636e-51 | -8.615850e-47 |
| Msa0522820 | Msa0887440 | 0.810260 | 1.258932e-50 | -8.615850e-47 |
| Msa0527420 | Msa0887440 | 0.831905 | 1.280674e-55 | -8.615850e-47 |
| Msa0537960 | Msa0887440 | 0.815533 | 8.806427e-52 | -8.615850e-47 |
| Msa0538020 | Msa0887440 | 0.818731 | 1.681633e-52 | -8.615850e-47 |
| Msa0549700 | Msa0887440 | 0.814534 | 1.466937e-51 | -8.615850e-47 |
| Msa0550820 | Msa0887440 | 0.805337 | 1.401332e-49 | -8.615850e-47 |
| Msa0550890 | Msa0887440 | 0.806494 | 8.004955e-50 | -8.615850e-47 |
| Msa0552920 | Msa0887440 | 0.848109 | 7.556203e-60 | -8.615850e-47 |
| Msa0555210 | Msa0887440 | 0.839802 | 1.274286e-57 | -8.615850e-47 |
| Msa0556960 | Msa0887440 | 0.819317 | 1.237339e-52 | -8.615850e-47 |
| Msa0560380 | Msa0887440 | 0.808336 | 3.255407e-50 | -8.615850e-47 |
| Msa0572370 | Msa0887440 | 0.816245 | 6.109432e-52 | -8.615850e-47 |
| Msa0583810 | Msa0887440 | 0.811421 | 7.060846e-51 | -8.615850e-47 |
| Msa0858250 | Msa0887440 | 0.811447 | 6.968597e-51 | -8.615850e-47 |
| Msa0860630 | Msa0887440 | 0.801484 | 8.811478e-49 | -8.615850e-47 |
| Msa0862960 | Msa0887440 | 0.805571 | 1.251739e-49 | -8.615850e-47 |
| Msa0868500 | Msa0887440 | 0.830857 | 2.319196e-55 | -8.615850e-47 |
| Msa0868510 | Msa0887440 | 0.830191 | 3.374632e-55 | -8.615850e-47 |
| Msa0868520 | Msa0887440 | 0.820502 | 6.630568e-53 | -8.615850e-47 |
| Msa0869420 | Msa0887440 | 0.806355 | 8.562473e-50 | -8.615850e-47 |
| Msa0880200 | Msa0887440 | 0.828206 | 1.022460e-54 | -8.615850e-47 |
| Msa0887440 | Msa0933320 | 0.807454 | 5.014523e-50 | -8.615850e-47 |
| Msa0887440 | Msa0934100 | 0.804405 | 2.195030e-49 | -8.615850e-47 |
| Msa0887440 | Msa0934800 | 0.800151 | 1.648898e-48 | -8.615850e-47 |
| Msa0887440 | Msa0937180 | 0.807431 | 5.072050e-50 | -8.615850e-47 |
| Msa0887440 | Msa0941320 | 0.814850 | 1.248886e-51 | -8.615850e-47 |
| Msa0887440 | Msa0941410 | 0.808838 | 2.543748e-50 | -8.615850e-47 |
| Msa0887440 | Msa0941420 | 0.805599 | 1.234974e-49 | -8.615850e-47 |
| Msa0887440 | Msa0958960 | 0.852257 | 5.198568e-61 | -8.615850e-47 |
| Msa0887440 | Msa0967940 | 0.806753 | 7.056651e-50 | -8.615850e-47 |
| Msa0887440 | Msa0978540 | 0.832189 | 1.089194e-55 | -8.615850e-47 |
| Msa0887440 | Msa0978550 | 0.829417 | 5.207506e-55 | -8.615850e-47 |
| Msa0887440 | Msa0978560 | 0.817249 | 3.637855e-52 | -8.615850e-47 |
| Msa0887440 | Msa0984230 | 0.803905 | 2.788262e-49 | -8.615850e-47 |
| Msa0887440 | Msa0988600 | 0.885240 | 9.641329e-72 | -8.615850e-47 |
| Msa0887440 | Msa0995130 | 0.809268 | 2.057477e-50 | -8.615850e-47 |
| Msa0887440 | Msa1002550 | 0.804890 | 1.738569e-49 | -8.615850e-47 |
| Msa0887440 | Msa1031190 | 0.818340 | 2.062726e-52 | -8.615850e-47 |
| Msa0887440 | Msa1032790 | 0.821872 | 3.204557e-53 | -8.615850e-47 |
| Msa0887440 | Msa1037440 | 0.812876 | 3.399903e-51 | -8.615850e-47 |
| Msa0887440 | Msa1040030 | 0.800563 | 1.358845e-48 | -8.615850e-47 |
| Msa0887440 | Msa1045750 | 0.836692 | 8.063845e-57 | -8.615850e-47 |
| Msa0887440 | Msa1047390 | 0.827812 | 1.272175e-54 | -8.615850e-47 |
| Msa0887440 | Msa1056790 | 0.808928 | 2.433158e-50 | -8.615850e-47 |
| Msa0887440 | Msa1061420 | 0.811979 | 5.339690e-51 | -8.615850e-47 |
| Msa0887440 | Msa1070370 | 0.817563 | 3.090897e-52 | -8.615850e-47 |
| Msa0887440 | Msa1070710 | 0.816043 | 6.776390e-52 | -8.615850e-47 |
| Msa0887440 | Msa1080610 | 0.816381 | 5.695264e-52 | -8.615850e-47 |
| Msa0887440 | Msa1080680 | 0.814772 | 1.299634e-51 | -8.615850e-47 |
| Msa0887440 | Msa1091400 | 0.812614 | 3.879938e-51 | -8.615850e-47 |
| Msa0887440 | Msa1091460 | 0.810963 | 8.875039e-51 | -8.615850e-47 |
| Msa0887440 | Msa1095880 | 0.807686 | 4.477738e-50 | -8.615850e-47 |
| Msa0887440 | Msa1119420 | 0.815997 | 6.938480e-52 | -8.615850e-47 |
| Msa0887440 | Msa1126320 | 0.823166 | 1.603568e-53 | -8.615850e-47 |
| Msa0887440 | Msa1134800 | 0.828178 | 1.038453e-54 | -8.615850e-47 |
| Msa0887440 | Msa1134840 | 0.836898 | 7.145344e-57 | -8.615850e-47 |
| Msa0887440 | Msa1158180 | 0.819240 | 1.288508e-52 | -8.615850e-47 |
| Msa0887440 | Msa1158540 | 0.807766 | 4.306087e-50 | -8.615850e-47 |
| Msa0887440 | Msa1161550 | 0.825504 | 4.521072e-54 | -8.615850e-47 |
| Msa0887440 | Msa1163130 | 0.809023 | 2.322258e-50 | -8.615850e-47 |
| Msa0887440 | Msa1167150 | 0.811506 | 6.766308e-51 | -8.615850e-47 |
| Msa0887440 | Msa1177300 | 0.831645 | 1.484480e-55 | -8.615850e-47 |
| Msa0887440 | Msa1190670 | 0.822905 | 1.844745e-53 | -8.615850e-47 |
| Msa0887440 | Msa1197740 | 0.806226 | 9.118522e-50 | -8.615850e-47 |
| Msa0887440 | Msa1203320 | 0.815434 | 9.265046e-52 | -8.615850e-47 |
| Msa0887440 | Msa1206500 | 0.847647 | 1.013412e-59 | -8.615850e-47 |
| Msa0887440 | Msa1211930 | 0.818630 | 1.772739e-52 | -8.615850e-47 |
| Msa0887440 | Msa1223520 | 0.824587 | 7.446275e-54 | -8.615850e-47 |
| Msa0887440 | Msa1228260 | 0.807835 | 4.161851e-50 | -8.615850e-47 |
| Msa0887440 | Msa1235620 | 0.805353 | 1.390800e-49 | -8.615850e-47 |
| Msa0887440 | Msa1244940 | 0.827121 | 1.862944e-54 | -8.615850e-47 |
| Msa0887440 | Msa1247200 | 0.801104 | 1.053773e-48 | -8.615850e-47 |
| Msa0887440 | Msa1250490 | 0.800745 | 1.247654e-48 | -8.615850e-47 |
| Msa0887440 | Msa1250500 | 0.804436 | 2.162411e-49 | -8.615850e-47 |
| Msa0887440 | Msa1251440 | 0.808883 | 2.488232e-50 | -8.615850e-47 |
| Msa0887440 | Msa1260640 | 0.802866 | 4.577781e-49 | -8.615850e-47 |
| Msa0887440 | Msa1263600 | 0.809872 | 1.526655e-50 | -8.615850e-47 |
| Msa0887440 | Msa1266750 | 0.832546 | 8.885949e-56 | -8.615850e-47 |
| Msa0887440 | Msa1271220 | 0.807764 | 4.309666e-50 | -8.615850e-47 |
| Msa0887440 | Msa1280520 | 0.815837 | 7.535096e-52 | -8.615850e-47 |
| Msa0887440 | Msa1297500 | 0.806356 | 8.561162e-50 | -8.615850e-47 |
| Msa0887440 | Msa1297550 | 0.819102 | 1.384846e-52 | -8.615850e-47 |
| Msa0887440 | Msa1297560 | 0.808172 | 3.529561e-50 | -8.615850e-47 |
| Msa0887440 | Msa1298180 | 0.807887 | 4.057734e-50 | -8.615850e-47 |
| Msa0887440 | Msa1303690 | 0.818877 | 1.558266e-52 | -8.615850e-47 |
| Msa0887440 | Msa1308430 | 0.804508 | 2.088507e-49 | -8.615850e-47 |
| Msa0887440 | Msa1317090 | 0.840344 | 9.200166e-58 | -8.615850e-47 |
| Msa0887440 | Msa1325260 | 0.820936 | 5.271322e-53 | -8.615850e-47 |
| Msa0887440 | Msa1330080 | 0.824524 | 7.705418e-54 | -8.615850e-47 |
| Msa0887440 | Msa1341850 | 0.804245 | 2.370117e-49 | -8.615850e-47 |
| Msa0887440 | Msa1342460 | 0.814033 | 1.892845e-51 | -8.615850e-47 |
| Msa0887440 | Msa1348180 | 0.819920 | 9.012532e-53 | -8.615850e-47 |
| Msa0887440 | Msa1350130 | 0.828304 | 9.687335e-55 | -8.615850e-47 |
| Msa0887440 | Msa1350590 | 0.809283 | 2.042704e-50 | -8.615850e-47 |
| Msa0887440 | Msa1363170 | 0.819445 | 1.157093e-52 | -8.615850e-47 |
| Msa0887440 | Msa1365420 | 0.825387 | 4.819841e-54 | -8.615850e-47 |
| Msa0887440 | Msa1372460 | 0.813821 | 2.108317e-51 | -8.615850e-47 |
| Msa0887440 | Msa1375120 | 0.806924 | 6.494386e-50 | -8.615850e-47 |
| Msa0887440 | Msa1375570 | 0.835217 | 1.908033e-56 | -8.615850e-47 |
| Msa0887440 | Msa1375650 | 0.800452 | 1.431513e-48 | -8.615850e-47 |
| Msa0887440 | Msa1379930 | 0.821276 | 4.399563e-53 | -8.615850e-47 |
| Msa0887440 | Msa1403590 | 0.801720 | 7.881072e-49 | -8.615850e-47 |
| Msa0887440 | Msa1405990 | 0.807976 | 3.884249e-50 | -8.615850e-47 |
| Msa0887440 | Msa1426880 | 0.803326 | 3.676452e-49 | -8.615850e-47 |
| Msa0887440 | Msa1434860 | 0.804270 | 2.341327e-49 | -8.615850e-47 |
| Msa0887440 | Msa1439000 | 0.806879 | 6.638438e-50 | -8.615850e-47 |
| Msa0887440 | Msa1440140 | 0.809798 | 1.583711e-50 | -8.615850e-47 |
| Msa0887440 | Msa1444750 | 0.823865 | 1.100530e-53 | -8.615850e-47 |
| Msa0887440 | Msa1455560 | 0.808361 | 3.217184e-50 | -8.615850e-47 |
| Msa0887440 | Msa1462700 | 0.835081 | 2.064494e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0887440 | MtrunA17_Chr6g0468661 | 84.547 | 453 | 23 | 3 | 1 | 407 | 1 | 452 | 0.0 | 683 |
| Msa0887440 | MtrunA17_Chr1g0202721 | 55.584 | 394 | 129 | 2 | 60 | 407 | 54 | 447 | 5.51e-139 | 404 |
| Msa0887440 | MtrunA17_Chr7g0238521 | 71.242 | 153 | 5 | 2 | 255 | 407 | 1 | 114 | 6.31e-47 | 156 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0887440 | AT5G24000.1 | 54.667 | 450 | 140 | 7 | 10 | 407 | 6 | 443 | 1.14e-147 | 426 |
| Msa0887440 | AT5G52540.1 | 53.531 | 439 | 150 | 5 | 18 | 407 | 28 | 461 | 5.61e-134 | 392 |
Find 98 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCATCTTCTTATTGTTCT+TGG | 0.155822 | 6_1:-49008821 | Msa0887440:CDS |
| ATCTTCAGCATTGGTGCTTT+TGG | 0.192389 | 6_1:-49012633 | Msa0887440:CDS |
| CTTCTTATTGTTCTTGGATT+AGG | 0.227467 | 6_1:-49008815 | Msa0887440:CDS |
| AGGTCGGAGAAGACTAAAAT+TGG | 0.252433 | 6_1:-49011668 | Msa0887440:CDS |
| ACTATTCCATTGCTATTGTT+TGG | 0.277840 | 6_1:-49011527 | Msa0887440:CDS |
| ATTGCAGTTGCCACTATAAT+TGG | 0.278265 | 6_1:-49011207 | Msa0887440:intron |
| TTAGCATCAAACGCGAATAT+TGG | 0.287334 | 6_1:-49008758 | Msa0887440:CDS |
| GCTCGTAATCGTGCAATTAA+TGG | 0.301843 | 6_1:+49008466 | None:intergenic |
| CTGATGATCATTGGGGTGTT+TGG | 0.308984 | 6_1:-49012662 | Msa0887440:CDS |
| GAAAGTTGCAGCAGCTCTAA+TGG | 0.324983 | 6_1:-49011130 | Msa0887440:CDS |
| GCTGCAACTTTCCAGTTATC+AGG | 0.326869 | 6_1:+49011141 | None:intergenic |
| GCATATGAAGTCTGAAAATC+AGG | 0.327161 | 6_1:-49009559 | Msa0887440:CDS |
| GATCTCTTGGTCCTGATAAC+TGG | 0.334655 | 6_1:-49011152 | Msa0887440:CDS |
| GCTCTAATGGGTAGCTATAT+TGG | 0.344060 | 6_1:-49011117 | Msa0887440:CDS |
| TATCTGTGCCGTTTATTTCA+TGG | 0.348152 | 6_1:-49010185 | Msa0887440:CDS |
| CATATCTCCTGATGATCATT+GGG | 0.348308 | 6_1:-49012670 | Msa0887440:CDS |
| ACATACTTCACAAAATTATA+CGG | 0.353945 | 6_1:-49009471 | Msa0887440:CDS |
| GTTGTTCCTGGAATTCTTAC+CGG | 0.358415 | 6_1:-49008683 | Msa0887440:CDS |
| TGGGAATCTTTAGTTGTTCC+TGG | 0.360735 | 6_1:-49008695 | Msa0887440:CDS |
| TGAATATACTTGGGGCAGTT+TGG | 0.369634 | 6_1:+49008867 | None:intergenic |
| ATACAAGGAGGAACTCTTCC+AGG | 0.383460 | 6_1:-49009447 | Msa0887440:CDS |
| CAAACCAAGCGCCTCTGAAA+TGG | 0.395191 | 6_1:+49010249 | None:intergenic |
| TCATATCTCCTGATGATCAT+TGG | 0.399513 | 6_1:-49012671 | Msa0887440:CDS |
| CAGTCACAGGTGGGTGTTTG+AGG | 0.407502 | 6_1:+49012898 | None:intergenic |
| CGGACATGAATTGAGGTTGT+TGG | 0.416859 | 6_1:+49012806 | None:intergenic |
| GCCATTCCACAAGCTGTTGT+AGG | 0.418638 | 6_1:+49008731 | None:intergenic |
| GGAGATTGTGAAATGATGAT+AGG | 0.420956 | 6_1:+49012945 | None:intergenic |
| GGACTTGCTGCAAGTAATCT+TGG | 0.427268 | 6_1:-49011608 | Msa0887440:CDS |
| AAAATGCCGGTAAGAATTCC+AGG | 0.431345 | 6_1:+49008677 | None:intergenic |
| TGTATACAATACAAACCAAT+TGG | 0.434079 | 6_1:-49008566 | Msa0887440:three_prime_UTR |
| GATACGTGGCGTGATGGGAT+TGG | 0.435807 | 6_1:+49012858 | None:intergenic |
| TTTCATGGTGTTGTTTGCAT+TGG | 0.444162 | 6_1:-49010170 | Msa0887440:CDS |
| AAACAACACCATGAAATAAA+CGG | 0.456022 | 6_1:+49010177 | None:intergenic |
| TGAGGTTGTAGTACGAGGTT+CGG | 0.461800 | 6_1:+49012786 | None:intergenic |
| AAGTATATTCATGTTTGCAC+TGG | 0.466227 | 6_1:-49008855 | Msa0887440:CDS |
| AAAGTTGCAGCAGCTCTAAT+GGG | 0.474333 | 6_1:-49011129 | Msa0887440:CDS |
| TGATCATCAGGAGATATGAT+AGG | 0.483007 | 6_1:+49012675 | None:intergenic |
| AATAGCAATGGAATAGTAAG+AGG | 0.484012 | 6_1:+49011533 | None:intergenic |
| ATACGTGGCGTGATGGGATT+GGG | 0.489815 | 6_1:+49012859 | None:intergenic |
| GCAGTAGCTGTCTGTAACAC+AGG | 0.490849 | 6_1:+49009528 | None:intergenic |
| ACCTGCATATTCAATTGTCT+TGG | 0.491981 | 6_1:-49011567 | Msa0887440:CDS |
| GCATCAAACGCGAATATTGG+CGG | 0.493349 | 6_1:-49008755 | Msa0887440:CDS |
| TTAGCAGCATAACTTCCAAT+TGG | 0.494938 | 6_1:+49008551 | None:intergenic |
| TGGCGTGATGGGATTGGGTG+TGG | 0.498273 | 6_1:+49012864 | None:intergenic |
| CGTGATGGGATTGGGTGTGG+TGG | 0.498309 | 6_1:+49012867 | None:intergenic |
| CAAACACCCCAATGATCATC+AGG | 0.499006 | 6_1:+49012663 | None:intergenic |
| CACTAGAGTACCAATTATAG+TGG | 0.499532 | 6_1:+49011197 | None:intergenic |
| CTGATCATGTATTTATATGA+TGG | 0.501876 | 6_1:+49012982 | None:intergenic |
| AGTGCAAACATGAATATACT+TGG | 0.504219 | 6_1:+49008857 | None:intergenic |
| ATCCAAGAACAATAAGAAGA+TGG | 0.504284 | 6_1:+49008819 | None:intergenic |
| CCATTCCACAAGCTGTTGTA+GGG | 0.506074 | 6_1:+49008732 | None:intergenic |
| TGGTCTGCTATCTTCAGCAT+TGG | 0.510382 | 6_1:-49012642 | Msa0887440:CDS |
| ATAGTACCTATGAGATCTCT+TGG | 0.510450 | 6_1:-49011165 | Msa0887440:CDS |
| CGAGGTTCGGACATGAATTG+AGG | 0.518408 | 6_1:+49012799 | None:intergenic |
| TGTGGAATGGCTAAGGCTAA+AGG | 0.521502 | 6_1:-49008719 | Msa0887440:CDS |
| GTGCAAACATGAATATACTT+GGG | 0.524524 | 6_1:+49008858 | None:intergenic |
| GGTCGGAGAAGACTAAAATT+GGG | 0.531713 | 6_1:-49011667 | Msa0887440:CDS |
| GTTGGTGGTGCAGTCTCTGC+GGG | 0.532669 | 6_1:+49010136 | None:intergenic |
| GAGATTGTGAAATGATGATA+GGG | 0.533250 | 6_1:+49012946 | None:intergenic |
| TCCAAGACAATTGAATATGC+AGG | 0.534421 | 6_1:+49011566 | None:intergenic |
| GCTTTAGTGAGTACGTTAGT+CGG | 0.544153 | 6_1:-49011629 | Msa0887440:CDS |
| GAATGGCTAAGGCTAAAGGC+TGG | 0.544445 | 6_1:-49008715 | Msa0887440:CDS |
| AAATGATGATAGGGAGTTGA+AGG | 0.546060 | 6_1:+49012955 | None:intergenic |
| CCCTACAACAGCTTGTGGAA+TGG | 0.546445 | 6_1:-49008732 | Msa0887440:CDS |
| GTTGCCATTTCAGAGGCGCT+TGG | 0.549654 | 6_1:-49010253 | Msa0887440:CDS |
| AACAGCTTGTGGAATGGCTA+AGG | 0.555634 | 6_1:-49008726 | Msa0887440:CDS |
| TTTGTGGTGGTTGGAGCTAG+TGG | 0.561107 | 6_1:-49008908 | Msa0887440:CDS |
| CGGAGTGATACGTGGCGTGA+TGG | 0.562584 | 6_1:+49012852 | None:intergenic |
| TCAGGACCAAGAGATCTCAT+AGG | 0.565976 | 6_1:+49011159 | None:intergenic |
| GGAGTGATACGTGGCGTGAT+GGG | 0.572927 | 6_1:+49012853 | None:intergenic |
| TTTGCTCCAAACAATAGCAA+TGG | 0.576769 | 6_1:+49011521 | None:intergenic |
| GGCGGCCCTACAACAGCTTG+TGG | 0.579346 | 6_1:-49008737 | Msa0887440:CDS |
| CACTATAATTGGTACTCTAG+TGG | 0.579767 | 6_1:-49011196 | Msa0887440:CDS |
| GGGTGTTTGAGGAGAGACAT+TGG | 0.585033 | 6_1:+49012909 | None:intergenic |
| GAAGACTAAAATTGGGAGCA+TGG | 0.585584 | 6_1:-49011660 | Msa0887440:CDS |
| CAGATACGAGGTAATTGTTG+TGG | 0.586356 | 6_1:+49012755 | None:intergenic |
| AATTACCTCGTATCTGTCAA+AGG | 0.593217 | 6_1:-49012748 | Msa0887440:CDS |
| GAGACTGCACCACCAACCAC+TGG | 0.599800 | 6_1:-49010130 | Msa0887440:intron |
| TAATTATGTTGCCATTTCAG+AGG | 0.603851 | 6_1:-49010260 | Msa0887440:CDS |
| CTAATGGGTAGCTATATTGG+TGG | 0.610720 | 6_1:-49011114 | Msa0887440:CDS |
| ACAAAATTATACGGTATACA+AGG | 0.612153 | 6_1:-49009462 | Msa0887440:CDS |
| AATGGCTAAGGCTAAAGGCT+GGG | 0.614901 | 6_1:-49008714 | Msa0887440:CDS |
| AAAATAGTACCAGTGGTTGG+TGG | 0.618699 | 6_1:+49010121 | None:intergenic |
| GACATTGGTGTCTATGTGTG+TGG | 0.620007 | 6_1:+49012924 | None:intergenic |
| CATATGAAGTCTGAAAATCA+GGG | 0.621061 | 6_1:-49009558 | Msa0887440:CDS |
| ATCTAGAACGGAGAGAATGT+CGG | 0.628518 | 6_1:+49012832 | None:intergenic |
| GGAGAGAGAACAGTCACAGG+TGG | 0.632224 | 6_1:+49012888 | None:intergenic |
| GGTTGTTGGAGAATCTAGAA+CGG | 0.642102 | 6_1:+49012820 | None:intergenic |
| GGTGGAGAGAGAACAGTCAC+AGG | 0.643121 | 6_1:+49012885 | None:intergenic |
| TGCAAACATGAATATACTTG+GGG | 0.655619 | 6_1:+49008859 | None:intergenic |
| GAGAGAGAACAGTCACAGGT+GGG | 0.665364 | 6_1:+49012889 | None:intergenic |
| GGTTGGTGGTGCAGTCTCTG+CGG | 0.668361 | 6_1:+49010135 | None:intergenic |
| GAGAATGTCGGAGTGATACG+TGG | 0.678549 | 6_1:+49012844 | None:intergenic |
| ATATCTCCTGATGATCATTG+GGG | 0.680137 | 6_1:-49012669 | Msa0887440:CDS |
| GAATATGCAGGTGCATCATG+TGG | 0.682049 | 6_1:+49011578 | None:intergenic |
| AAATTATACGGTATACAAGG+AGG | 0.729505 | 6_1:-49009459 | Msa0887440:CDS |
| ATAACACTTTGAGTTATACG+AGG | 0.733303 | 6_1:+49012723 | None:intergenic |
| AGGTTCCTTTGACAGATACG+AGG | 0.747316 | 6_1:+49012743 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTATCTATACAAA+TGG | - | chr6_1:49009997-49010016 | Msa0887440:intron | 10.0% |
| !! | TATATGATTAAATAACTTAA+TGG | - | chr6_1:49011567-49011586 | Msa0887440:CDS | 10.0% |
| !! | ATATGATTAAATAACTTAAT+GGG | - | chr6_1:49011568-49011587 | Msa0887440:CDS | 10.0% |
| !!! | TTCATAATTCTATTTCTTTA+TGG | - | chr6_1:49008880-49008899 | Msa0887440:CDS | 15.0% |
| !!! | TTGACTAAAAAAAATTTGTT+TGG | - | chr6_1:49008989-49009008 | Msa0887440:intron | 15.0% |
| !!! | AAAAAAAATTTGTTTGGTAA+CGG | - | chr6_1:49008995-49009014 | Msa0887440:intron | 15.0% |
| !! | AAATAATTAAATGTAATTGC+AGG | + | chr6_1:49010083-49010102 | None:intergenic | 15.0% |
| !! | TATTATAGACATGTAATATA+TGG | + | chr6_1:49010731-49010750 | None:intergenic | 15.0% |
| !! | ATTACTTTCATTATTTAGTT+TGG | + | chr6_1:49012243-49012262 | None:intergenic | 15.0% |
| !! | AATAATGAAAGTAATATTTG+AGG | - | chr6_1:49012248-49012267 | Msa0887440:intron | 15.0% |
| !! | GTAAAATATGTAAATTCTTT+AGG | - | chr6_1:49012376-49012395 | Msa0887440:intron | 15.0% |
| !! | TTACTTCTTGTAAAAATTTA+AGG | - | chr6_1:49012437-49012456 | Msa0887440:intron | 15.0% |
| !!! | TCTATTCATTTTGTGTAATT+TGG | - | chr6_1:49008846-49008865 | Msa0887440:CDS | 20.0% |
| !!! | ATTCAATTAGTTTTAAACTG+CGG | - | chr6_1:49009349-49009368 | Msa0887440:intron | 20.0% |
| !!! | CGTTGTGAAATTTTAATTTT+TGG | - | chr6_1:49009612-49009631 | Msa0887440:intron | 20.0% |
| !!! | TTTTTTATCTATACAAATGG+CGG | - | chr6_1:49010000-49010019 | Msa0887440:intron | 20.0% |
| !!! | TATTATTTGAAACATGTTGA+TGG | - | chr6_1:49011070-49011089 | Msa0887440:intron | 20.0% |
| !!! | TGGTACTATTTTTACTATAT+CGG | - | chr6_1:49011310-49011329 | Msa0887440:intron | 20.0% |
| !! | AAAAATCATTCCAAAAATTC+TGG | + | chr6_1:49011382-49011401 | None:intergenic | 20.0% |
| !! | AAATATCATAATCATCTTCA+TGG | + | chr6_1:49011441-49011460 | None:intergenic | 20.0% |
| !! | ATTAGTTATGAAATGATGAT+AGG | - | chr6_1:49011531-49011550 | Msa0887440:CDS | 20.0% |
| !! | ACATACTTCACAAAATTATA+CGG | - | chr6_1:49011949-49011968 | Msa0887440:intron | 20.0% |
| !!! | AGAAGAGTAAACATTAATTT+TGG | + | chr6_1:49012307-49012326 | None:intergenic | 20.0% |
| !! | TTGTAAAAATTTAAGGATCA+TGG | - | chr6_1:49012444-49012463 | Msa0887440:intron | 20.0% |
| !! | TGTAAAAATTTAAGGATCAT+GGG | - | chr6_1:49012445-49012464 | Msa0887440:intron | 20.0% |
| !!! | GTTCATATTTTAAACATCTT+AGG | + | chr6_1:49012472-49012491 | None:intergenic | 20.0% |
| ! | CTGATCATGTATTTATATGA+TGG | + | chr6_1:49008441-49008460 | None:intergenic | 25.0% |
| !!! | TTTATGGTTTGTTGAGAAAT+AGG | - | chr6_1:49008896-49008915 | Msa0887440:CDS | 25.0% |
| ! | AACTAACACTCTATTATAGT+GGG | + | chr6_1:49009494-49009513 | None:intergenic | 25.0% |
| ! | AAACTAACACTCTATTATAG+TGG | + | chr6_1:49009495-49009514 | None:intergenic | 25.0% |
| !! | AGATTTGAAGCATTATATGT+TGG | - | chr6_1:49009640-49009659 | Msa0887440:intron | 25.0% |
| ! | ATAAGTTGTTGTGAAATACA+AGG | - | chr6_1:49009732-49009751 | Msa0887440:intron | 25.0% |
| ! | TAATTAAATGTAATTGCAGG+TGG | + | chr6_1:49010080-49010099 | None:intergenic | 25.0% |
| ! | TCATAAACTATGAACAGAAA+CGG | + | chr6_1:49010139-49010158 | None:intergenic | 25.0% |
| ! | TTTCTGTTCATAGTTTATGA+AGG | - | chr6_1:49010139-49010158 | Msa0887440:CDS | 25.0% |
| !! | ACAACTGTAATTTAGAACTA+CGG | + | chr6_1:49010522-49010541 | None:intergenic | 25.0% |
| ! | AAACTCTTTGCTTCAAAATT+AGG | - | chr6_1:49010824-49010843 | Msa0887440:intron | 25.0% |
| ! | AACTCTTTGCTTCAAAATTA+GGG | - | chr6_1:49010825-49010844 | Msa0887440:intron | 25.0% |
| ! | ATAGTTGAGCAATTAAGAAT+TGG | - | chr6_1:49010988-49011007 | Msa0887440:intron | 25.0% |
| ! | TAGTTGAGCAATTAAGAATT+GGG | - | chr6_1:49010989-49011008 | Msa0887440:intron | 25.0% |
| ! | AAACAACACCATGAAATAAA+CGG | + | chr6_1:49011246-49011265 | None:intergenic | 25.0% |
| ! | TATAGTAAAAATAGTACCAG+TGG | + | chr6_1:49011309-49011328 | None:intergenic | 25.0% |
| ! | ACAAGAAACAGCTTATAAAT+TGG | + | chr6_1:49011340-49011359 | None:intergenic | 25.0% |
| !! | TTGTTTCATTTTCTGTGTTT+GGG | - | chr6_1:49011356-49011375 | Msa0887440:intron | 25.0% |
| ! | ATCTTCATGGTCATAAATAA+AGG | + | chr6_1:49011428-49011447 | None:intergenic | 25.0% |
| ! | GTATTCATCATATGAACTTA+AGG | + | chr6_1:49011479-49011498 | None:intergenic | 25.0% |
| ! | CATCATTTCATAACTAATAC+TGG | + | chr6_1:49011529-49011548 | None:intergenic | 25.0% |
| ! | ACAAAATTATACGGTATACA+AGG | - | chr6_1:49011958-49011977 | Msa0887440:intron | 25.0% |
| !!! | TTTGTTGATTCTATTTTGAG+TGG | - | chr6_1:49012105-49012124 | Msa0887440:intron | 25.0% |
| !! | TGCTCTTTGATTAGTTAATT+TGG | + | chr6_1:49012211-49012230 | None:intergenic | 25.0% |
| !! | AACTAATCAAAGAGCATAAT+CGG | - | chr6_1:49012215-49012234 | Msa0887440:intron | 25.0% |
| !! | ATGTCTTTTGTTAGTCAATT+TGG | + | chr6_1:49012275-49012294 | None:intergenic | 25.0% |
| ! | GTTGACAATTATAACTGTTA+AGG | - | chr6_1:49012398-49012417 | Msa0887440:intron | 25.0% |
| ! | AATTATAACTGTTAAGGCTT+TGG | - | chr6_1:49012404-49012423 | Msa0887440:intron | 25.0% |
| !! | GTTTCAATTGCAACATTTTT+AGG | - | chr6_1:49012770-49012789 | Msa0887440:CDS | 25.0% |
| !!! | ATTGCAACATTTTTAGGTAT+TGG | - | chr6_1:49012776-49012795 | Msa0887440:CDS | 25.0% |
| !!! | ACATTTTTAGGTATTGGTTT+TGG | - | chr6_1:49012782-49012801 | Msa0887440:CDS | 25.0% |
| ! | TGTATACAATACAAACCAAT+TGG | - | chr6_1:49012854-49012873 | Msa0887440:CDS | 25.0% |
| !!! | TGAACTCAATGTAACTTTTT+TGG | - | chr6_1:49012927-49012946 | Msa0887440:exon | 25.0% |
| GAGATTGTGAAATGATGATA+GGG | + | chr6_1:49008477-49008496 | None:intergenic | 30.0% | |
| ! | ATAACACTTTGAGTTATACG+AGG | + | chr6_1:49008700-49008719 | None:intergenic | 30.0% |
| ! | ACTTATAAGCTGACTTATAG+CGG | + | chr6_1:49009266-49009285 | None:intergenic | 30.0% |
| ! | TTTTTCCCAAACAAAGCATA+AGG | - | chr6_1:49009321-49009340 | Msa0887440:intron | 30.0% |
| ! | TTTTCCCAAACAAAGCATAA+GGG | - | chr6_1:49009322-49009341 | Msa0887440:intron | 30.0% |
| !! | ATAGTGGGTAAATAGTATAG+TGG | + | chr6_1:49009479-49009498 | None:intergenic | 30.0% |
| !! | TTGAGAGATTGATAATGCTA+TGG | - | chr6_1:49009555-49009574 | Msa0887440:CDS | 30.0% |
| ! | TCATTAGATCTGAAGTAGAT+TGG | - | chr6_1:49009582-49009601 | Msa0887440:intron | 30.0% |
| ! | CATTAGATCTGAAGTAGATT+GGG | - | chr6_1:49009583-49009602 | Msa0887440:intron | 30.0% |
| ! | TGAAGCATTATATGTTGGAA+TGG | - | chr6_1:49009645-49009664 | Msa0887440:intron | 30.0% |
| AATAGCAATGGAATAGTAAG+AGG | + | chr6_1:49009890-49009909 | None:intergenic | 30.0% | |
| ! | ACTATTCCATTGCTATTGTT+TGG | - | chr6_1:49009893-49009912 | Msa0887440:intron | 30.0% |
| TTCTTGTAGCTTTCTTACTT+GGG | - | chr6_1:49009954-49009973 | Msa0887440:intron | 30.0% | |
| AAGTTCACCATAATTAAGCA+TGG | + | chr6_1:49010356-49010375 | None:intergenic | 30.0% | |
| !! | GTAGTTCTAAATTACAGTTG+TGG | - | chr6_1:49010521-49010540 | Msa0887440:intron | 30.0% |
| ATAATTTAGCCAGAATGTCA+AGG | + | chr6_1:49010571-49010590 | None:intergenic | 30.0% | |
| GCAGATATAGTTCAAAATTG+CGG | + | chr6_1:49010664-49010683 | None:intergenic | 30.0% | |
| TAAATGCTAGATACATCTAG+AGG | - | chr6_1:49010700-49010719 | Msa0887440:intron | 30.0% | |
| ACTCTTTGCTTCAAAATTAG+GGG | - | chr6_1:49010826-49010845 | Msa0887440:intron | 30.0% | |
| ATGCCGTTAAAAATTGCATA+GGG | - | chr6_1:49010938-49010957 | Msa0887440:intron | 30.0% | |
| ! | CATCCCTATGCAATTTTTAA+CGG | + | chr6_1:49010944-49010963 | None:intergenic | 30.0% |
| !!! | CATGTTGATGGATTTTACAA+CGG | - | chr6_1:49011082-49011101 | Msa0887440:intron | 30.0% |
| ! | TAATTATGTTGCCATTTCAG+AGG | - | chr6_1:49011160-49011179 | Msa0887440:CDS | 30.0% |
| ! | CTTGTTTCATTTTCTGTGTT+TGG | - | chr6_1:49011355-49011374 | Msa0887440:intron | 30.0% |
| ATAACTTAATGGGAAACTGA+TGG | - | chr6_1:49011578-49011597 | Msa0887440:CDS | 30.0% | |
| !! | TTTGTTATTAAGGCAAGATG+TGG | - | chr6_1:49011630-49011649 | Msa0887440:CDS | 30.0% |
| ! | TTGTTATTAAGGCAAGATGT+GGG | - | chr6_1:49011631-49011650 | Msa0887440:CDS | 30.0% |
| ! | TAGACTGGAATTTAAAGCTA+TGG | - | chr6_1:49011720-49011739 | Msa0887440:intron | 30.0% |
| TTGTGTTTGTTCATCTTGAA+TGG | - | chr6_1:49011793-49011812 | Msa0887440:intron | 30.0% | |
| CTTGATTTAACGAGTAATGT+TGG | - | chr6_1:49011825-49011844 | Msa0887440:intron | 30.0% | |
| CATATGAAGTCTGAAAATCA+GGG | - | chr6_1:49011862-49011881 | Msa0887440:intron | 30.0% | |
| AAATTATACGGTATACAAGG+AGG | - | chr6_1:49011961-49011980 | Msa0887440:intron | 30.0% | |
| ! | ACTAATCAAAGAGCATAATC+GGG | - | chr6_1:49012216-49012235 | Msa0887440:intron | 30.0% |
| ATATCTACAGAAACAACATG+AGG | + | chr6_1:49012336-49012355 | None:intergenic | 30.0% | |
| ATATGAACTATTTCGTTCAC+AGG | - | chr6_1:49012484-49012503 | Msa0887440:intron | 30.0% | |
| TGCAAACATGAATATACTTG+GGG | + | chr6_1:49012564-49012583 | None:intergenic | 30.0% | |
| GTGCAAACATGAATATACTT+GGG | + | chr6_1:49012565-49012584 | None:intergenic | 30.0% | |
| AGTGCAAACATGAATATACT+TGG | + | chr6_1:49012566-49012585 | None:intergenic | 30.0% | |
| AAGTATATTCATGTTTGCAC+TGG | - | chr6_1:49012565-49012584 | Msa0887440:intron | 30.0% | |
| ATCCATCTTCTTATTGTTCT+TGG | - | chr6_1:49012599-49012618 | Msa0887440:intron | 30.0% | |
| ATCCAAGAACAATAAGAAGA+TGG | + | chr6_1:49012604-49012623 | None:intergenic | 30.0% | |
| CTTCTTATTGTTCTTGGATT+AGG | - | chr6_1:49012605-49012624 | Msa0887440:intron | 30.0% | |
| AATTGAAACACCAAAAATGC+CGG | + | chr6_1:49012759-49012778 | None:intergenic | 30.0% | |
| !!! | AGGTATTGGTTTTGGATTAA+TGG | - | chr6_1:49012790-49012809 | Msa0887440:CDS | 30.0% |
| AAATGATGATAGGGAGTTGA+AGG | + | chr6_1:49008468-49008487 | None:intergenic | 35.0% | |
| GGAGATTGTGAAATGATGAT+AGG | + | chr6_1:49008478-49008497 | None:intergenic | 35.0% | |
| !!! | ATTGTTGTGGTCTTGTTTTG+AGG | + | chr6_1:49008655-49008674 | None:intergenic | 35.0% |
| AATTACCTCGTATCTGTCAA+AGG | - | chr6_1:49008672-49008691 | Msa0887440:CDS | 35.0% | |
| TGATCATCAGGAGATATGAT+AGG | + | chr6_1:49008748-49008767 | None:intergenic | 35.0% | |
| TCATATCTCCTGATGATCAT+TGG | - | chr6_1:49008749-49008768 | Msa0887440:CDS | 35.0% | |
| CATATCTCCTGATGATCATT+GGG | - | chr6_1:49008750-49008769 | Msa0887440:CDS | 35.0% | |
| ATATCTCCTGATGATCATTG+GGG | - | chr6_1:49008751-49008770 | Msa0887440:CDS | 35.0% | |
| GTGAGCTTATGCAATGTTAA+TGG | - | chr6_1:49009101-49009120 | Msa0887440:intron | 35.0% | |
| GCTTATCTGCTATCTTATAG+CGG | + | chr6_1:49009292-49009311 | None:intergenic | 35.0% | |
| !! | GCTTTGTTTGGGAAAAATAG+TGG | + | chr6_1:49009318-49009337 | None:intergenic | 35.0% |
| !! | CAATCCCTTATGCTTTGTTT+GGG | + | chr6_1:49009329-49009348 | None:intergenic | 35.0% |
| ! | TCAATCCCTTATGCTTTGTT+TGG | + | chr6_1:49009330-49009349 | None:intergenic | 35.0% |
| TAAATAGTATAGTGGCACAG+TGG | + | chr6_1:49009471-49009490 | None:intergenic | 35.0% | |
| ! | ATCTGAAGTAGATTGGGATT+TGG | - | chr6_1:49009589-49009608 | Msa0887440:intron | 35.0% |
| GTTGTTGTGAAATACAAGGT+CGG | - | chr6_1:49009736-49009755 | Msa0887440:intron | 35.0% | |
| ACCTGCATATTCAATTGTCT+TGG | - | chr6_1:49009853-49009872 | Msa0887440:intron | 35.0% | |
| TCCAAGACAATTGAATATGC+AGG | + | chr6_1:49009857-49009876 | None:intergenic | 35.0% | |
| TTTGCTCCAAACAATAGCAA+TGG | + | chr6_1:49009902-49009921 | None:intergenic | 35.0% | |
| ATCAAGTAGTTCGTTCAACT+GGG | - | chr6_1:49009927-49009946 | Msa0887440:intron | 35.0% | |
| CTTCTTGTAGCTTTCTTACT+TGG | - | chr6_1:49009953-49009972 | Msa0887440:intron | 35.0% | |
| TTTAGATTGAAGCTGTGTTC+CGG | - | chr6_1:49010025-49010044 | Msa0887440:intron | 35.0% | |
| TTAAATGTAATTGCAGGTGG+CGG | + | chr6_1:49010077-49010096 | None:intergenic | 35.0% | |
| TCAAATTATTACCAGTGTCG+TGG | - | chr6_1:49010110-49010129 | Msa0887440:intron | 35.0% | |
| !! | CATAGTTTATGAAGGTACTG+TGG | - | chr6_1:49010147-49010166 | Msa0887440:CDS | 35.0% |
| ATTGCAGTTGCCACTATAAT+TGG | - | chr6_1:49010213-49010232 | Msa0887440:CDS | 35.0% | |
| ! | CACTAGAGTACCAATTATAG+TGG | + | chr6_1:49010226-49010245 | None:intergenic | 35.0% |
| CACTATAATTGGTACTCTAG+TGG | - | chr6_1:49010224-49010243 | Msa0887440:CDS | 35.0% | |
| ATAGTACCTATGAGATCTCT+TGG | - | chr6_1:49010255-49010274 | Msa0887440:CDS | 35.0% | |
| AGTTGCTCCATGCTTAATTA+TGG | - | chr6_1:49010346-49010365 | Msa0887440:intron | 35.0% | |
| CTAAATTACAGTTGTGGTCT+CGG | - | chr6_1:49010527-49010546 | Msa0887440:intron | 35.0% | |
| GCTAAATTATGCAGCAAATG+AGG | - | chr6_1:49010581-49010600 | Msa0887440:intron | 35.0% | |
| ! | GCGTTTTGTCACAAACATAT+TGG | + | chr6_1:49010755-49010774 | None:intergenic | 35.0% |
| GATGCCGTTAAAAATTGCAT+AGG | - | chr6_1:49010937-49010956 | Msa0887440:intron | 35.0% | |
| !! | TATCTGTGCCGTTTATTTCA+TGG | - | chr6_1:49011235-49011254 | Msa0887440:intron | 35.0% |
| !! | TTTCATGGTGTTGTTTGCAT+TGG | - | chr6_1:49011250-49011269 | Msa0887440:intron | 35.0% |
| GTAAAAATAGTACCAGTGGT+TGG | + | chr6_1:49011305-49011324 | None:intergenic | 35.0% | |
| CAATCAACATATGTGGATGT+TGG | + | chr6_1:49011503-49011522 | None:intergenic | 35.0% | |
| CTGGAAACAATCAACATATG+TGG | + | chr6_1:49011510-49011529 | None:intergenic | 35.0% | |
| !! | CGCTGCAAACTTTGTTATTA+AGG | - | chr6_1:49011620-49011639 | Msa0887440:CDS | 35.0% |
| GCATATGAAGTCTGAAAATC+AGG | - | chr6_1:49011861-49011880 | Msa0887440:intron | 35.0% | |
| TTGGTTCACAAAACACACAT+GGG | + | chr6_1:49012192-49012211 | None:intergenic | 35.0% | |
| ! | TTTGGTTCACAAAACACACA+TGG | + | chr6_1:49012193-49012212 | None:intergenic | 35.0% |
| !!! | TCGTTCACAGGTATTTTTTG+TGG | - | chr6_1:49012496-49012515 | Msa0887440:intron | 35.0% |
| !!! | TTCACAGGTATTTTTTGTGG+TGG | - | chr6_1:49012499-49012518 | Msa0887440:intron | 35.0% |
| TTAGCATCAAACGCGAATAT+TGG | - | chr6_1:49012662-49012681 | Msa0887440:CDS | 35.0% | |
| TTAGCAGCATAACTTCCAAT+TGG | + | chr6_1:49012872-49012891 | None:intergenic | 35.0% | |
| ! | ATGCTGCTAACACAGTTTTA+AGG | - | chr6_1:49012882-49012901 | Msa0887440:CDS | 35.0% |
| ! | ATCTAGAACGGAGAGAATGT+CGG | + | chr6_1:49008591-49008610 | None:intergenic | 40.0% |
| GGTTGTTGGAGAATCTAGAA+CGG | + | chr6_1:49008603-49008622 | None:intergenic | 40.0% | |
| !!! | TGTTTTGAGGTTGTAGTACG+AGG | + | chr6_1:49008642-49008661 | None:intergenic | 40.0% |
| CAGATACGAGGTAATTGTTG+TGG | + | chr6_1:49008668-49008687 | None:intergenic | 40.0% | |
| !!! | ATCTTCAGCATTGGTGCTTT+TGG | - | chr6_1:49008787-49008806 | Msa0887440:CDS | 40.0% |
| ACTTTCTCGTGAGCTTATAG+CGG | - | chr6_1:49009020-49009039 | Msa0887440:intron | 40.0% | |
| CTGATTGAAGTTGCAGTGTT+TGG | + | chr6_1:49009234-49009253 | None:intergenic | 40.0% | |
| !!! | TTAGTTTTAAACTGCGGCTG+TGG | - | chr6_1:49009355-49009374 | Msa0887440:intron | 40.0% |
| TTGCAACAAGCACAATGACA+AGG | + | chr6_1:49009394-49009413 | None:intergenic | 40.0% | |
| ! | GCTTGTTGCAAAATGCATTG+CGG | - | chr6_1:49009403-49009422 | Msa0887440:intron | 40.0% |
| AGGTCGGAGAAGACTAAAAT+TGG | - | chr6_1:49009752-49009771 | Msa0887440:intron | 40.0% | |
| GGTCGGAGAAGACTAAAATT+GGG | - | chr6_1:49009753-49009772 | Msa0887440:intron | 40.0% | |
| GAAGACTAAAATTGGGAGCA+TGG | - | chr6_1:49009760-49009779 | Msa0887440:intron | 40.0% | |
| GCTTTAGTGAGTACGTTAGT+CGG | - | chr6_1:49009791-49009810 | Msa0887440:intron | 40.0% | |
| CATCAAGTAGTTCGTTCAAC+TGG | - | chr6_1:49009926-49009945 | Msa0887440:intron | 40.0% | |
| TGTCAGACATCGACATATGT+AGG | + | chr6_1:49010054-49010073 | None:intergenic | 40.0% | |
| ! | AAAGTTGCAGCAGCTCTAAT+GGG | - | chr6_1:49010291-49010310 | Msa0887440:intron | 40.0% |
| ! | GCTCTAATGGGTAGCTATAT+TGG | - | chr6_1:49010303-49010322 | Msa0887440:intron | 40.0% |
| ! | CTAATGGGTAGCTATATTGG+TGG | - | chr6_1:49010306-49010325 | Msa0887440:intron | 40.0% |
| TTTGTGACAAAACGCTAGCT+TGG | - | chr6_1:49010760-49010779 | Msa0887440:intron | 40.0% | |
| !!! | GCTAGCTAGTTTTGGTTTCT+TGG | - | chr6_1:49011045-49011064 | Msa0887440:intron | 40.0% |
| CAGCTACACAACAATCAACA+AGG | + | chr6_1:49011139-49011158 | None:intergenic | 40.0% | |
| AAAATAGTACCAGTGGTTGG+TGG | + | chr6_1:49011302-49011321 | None:intergenic | 40.0% | |
| ! | TGTGTTTGGGCCAGAATTTT+TGG | - | chr6_1:49011369-49011388 | Msa0887440:intron | 40.0% |
| ATAAGGGGACTAATCAGCTT+TGG | + | chr6_1:49012036-49012055 | None:intergenic | 40.0% | |
| AGTATGACCAGCAGGTATAA+GGG | + | chr6_1:49012052-49012071 | None:intergenic | 40.0% | |
| !!! | CAGGTATTTTTTGTGGTGGT+TGG | - | chr6_1:49012503-49012522 | Msa0887440:intron | 40.0% |
| TGAATATACTTGGGGCAGTT+TGG | + | chr6_1:49012556-49012575 | None:intergenic | 40.0% | |
| TGGGAATCTTTAGTTGTTCC+TGG | - | chr6_1:49012725-49012744 | Msa0887440:CDS | 40.0% | |
| GTTGTTCCTGGAATTCTTAC+CGG | - | chr6_1:49012737-49012756 | Msa0887440:CDS | 40.0% | |
| AAAATGCCGGTAAGAATTCC+AGG | + | chr6_1:49012746-49012765 | None:intergenic | 40.0% | |
| ! | GGAATTCTTACCGGCATTTT+TGG | - | chr6_1:49012746-49012765 | Msa0887440:CDS | 40.0% |
| !!! | CTGCTAACACAGTTTTAAGG+TGG | - | chr6_1:49012885-49012904 | Msa0887440:CDS | 40.0% |
| GCTCGTAATCGTGCAATTAA+TGG | + | chr6_1:49012957-49012976 | None:intergenic | 40.0% | |
| ! | GACATTGGTGTCTATGTGTG+TGG | + | chr6_1:49008499-49008518 | None:intergenic | 45.0% |
| CGGACATGAATTGAGGTTGT+TGG | + | chr6_1:49008617-49008636 | None:intergenic | 45.0% | |
| TGAGGTTGTAGTACGAGGTT+CGG | + | chr6_1:49008637-49008656 | None:intergenic | 45.0% | |
| AGGTTCCTTTGACAGATACG+AGG | + | chr6_1:49008680-49008699 | None:intergenic | 45.0% | |
| CAAACACCCCAATGATCATC+AGG | + | chr6_1:49008760-49008779 | None:intergenic | 45.0% | |
| ! | CTGATGATCATTGGGGTGTT+TGG | - | chr6_1:49008758-49008777 | Msa0887440:CDS | 45.0% |
| TGGTCTGCTATCTTCAGCAT+TGG | - | chr6_1:49008778-49008797 | Msa0887440:CDS | 45.0% | |
| !! | GCATTGGTGCTTTTGGTCTA+TGG | - | chr6_1:49008794-49008813 | Msa0887440:CDS | 45.0% |
| !! | GGACTTGCTGCAAGTAATCT+TGG | - | chr6_1:49009812-49009831 | Msa0887440:intron | 45.0% |
| GAATATGCAGGTGCATCATG+TGG | + | chr6_1:49009845-49009864 | None:intergenic | 45.0% | |
| GTAGCTTTCTTACTTGGGTC+AGG | - | chr6_1:49009959-49009978 | Msa0887440:intron | 45.0% | |
| TCAGGACCAAGAGATCTCAT+AGG | + | chr6_1:49010264-49010283 | None:intergenic | 45.0% | |
| GATCTCTTGGTCCTGATAAC+TGG | - | chr6_1:49010268-49010287 | Msa0887440:intron | 45.0% | |
| GCTGCAACTTTCCAGTTATC+AGG | + | chr6_1:49010282-49010301 | None:intergenic | 45.0% | |
| ! | GAAAGTTGCAGCAGCTCTAA+TGG | - | chr6_1:49010290-49010309 | Msa0887440:intron | 45.0% |
| AGAGATCTTAACCACCGTTG+TGG | + | chr6_1:49010616-49010635 | None:intergenic | 45.0% | |
| AAATTCCCTGCAGCCACTAA+TGG | - | chr6_1:49010853-49010872 | Msa0887440:intron | 45.0% | |
| AATTCCCTGCAGCCACTAAT+GGG | - | chr6_1:49010854-49010873 | Msa0887440:intron | 45.0% | |
| CTAGACACAACTCCCATTAG+TGG | + | chr6_1:49010869-49010888 | None:intergenic | 45.0% | |
| CTAATGGGAGTTGTGTCTAG+TGG | - | chr6_1:49010869-49010888 | Msa0887440:intron | 45.0% | |
| !! | GATGAGTCGCTAGCTAGTTT+TGG | - | chr6_1:49011037-49011056 | Msa0887440:intron | 45.0% |
| !!! | TCAGCATCAGTTTTAGCTGC+AGG | - | chr6_1:49011194-49011213 | Msa0887440:CDS | 45.0% |
| !!! | ATCAGTTTTAGCTGCAGGAG+TGG | - | chr6_1:49011199-49011218 | Msa0887440:CDS | 45.0% |
| ATACAAGGAGGAACTCTTCC+AGG | - | chr6_1:49011973-49011992 | Msa0887440:intron | 45.0% | |
| ACGATGATTGCAGTTACTCC+TGG | + | chr6_1:49011994-49012013 | None:intergenic | 45.0% | |
| ! | AATCAGCTTTGGTGCAAGAG+TGG | + | chr6_1:49012025-49012044 | None:intergenic | 45.0% |
| ATTAGTCCCCTTATACCTGC+TGG | - | chr6_1:49012042-49012061 | Msa0887440:intron | 45.0% | |
| GTATGACCAGCAGGTATAAG+GGG | + | chr6_1:49012051-49012070 | None:intergenic | 45.0% | |
| CAGTATGACCAGCAGGTATA+AGG | + | chr6_1:49012053-49012072 | None:intergenic | 45.0% | |
| TGTTACCTGCATCAAGACCA+AGG | + | chr6_1:49012079-49012098 | None:intergenic | 45.0% | |
| GCATCAAACGCGAATATTGG+CGG | - | chr6_1:49012665-49012684 | Msa0887440:CDS | 45.0% | |
| CCATTCCACAAGCTGTTGTA+GGG | + | chr6_1:49012691-49012710 | None:intergenic | 45.0% | |
| AACAGCTTGTGGAATGGCTA+AGG | - | chr6_1:49012694-49012713 | Msa0887440:CDS | 45.0% | |
| TGTGGAATGGCTAAGGCTAA+AGG | - | chr6_1:49012701-49012720 | Msa0887440:CDS | 45.0% | |
| AATGGCTAAGGCTAAAGGCT+GGG | - | chr6_1:49012706-49012725 | Msa0887440:CDS | 45.0% | |
| GGGTGTTTGAGGAGAGACAT+TGG | + | chr6_1:49008514-49008533 | None:intergenic | 50.0% | |
| GAGAGAGAACAGTCACAGGT+GGG | + | chr6_1:49008534-49008553 | None:intergenic | 50.0% | |
| ! | ATACGTGGCGTGATGGGATT+GGG | + | chr6_1:49008564-49008583 | None:intergenic | 50.0% |
| GAGAATGTCGGAGTGATACG+TGG | + | chr6_1:49008579-49008598 | None:intergenic | 50.0% | |
| CGAGGTTCGGACATGAATTG+AGG | + | chr6_1:49008624-49008643 | None:intergenic | 50.0% | |
| CATCGACATATGTAGGACGC+CGG | + | chr6_1:49010047-49010066 | None:intergenic | 50.0% | |
| CACTGCGAACCTTGACATTC+TGG | - | chr6_1:49010559-49010578 | Msa0887440:intron | 50.0% | |
| TGCAGCAAATGAGGTCAGTG+TGG | - | chr6_1:49010590-49010609 | Msa0887440:intron | 50.0% | |
| AACTCCCATTAGTGGCTGCA+GGG | + | chr6_1:49010861-49010880 | None:intergenic | 50.0% | |
| TGGGAGTTGTGTCTAGTGGA+AGG | - | chr6_1:49010873-49010892 | Msa0887440:intron | 50.0% | |
| GGGAGTTGTGTCTAGTGGAA+GGG | - | chr6_1:49010874-49010893 | Msa0887440:intron | 50.0% | |
| GGAGTTGTGTCTAGTGGAAG+GGG | - | chr6_1:49010875-49010894 | Msa0887440:intron | 50.0% | |
| ! | CAAACCAAGCGCCTCTGAAA+TGG | + | chr6_1:49011174-49011193 | None:intergenic | 50.0% |
| AGGCAAGATGTGGGCAAATG+TGG | - | chr6_1:49011640-49011659 | Msa0887440:CDS | 50.0% | |
| TGTCTCTGCAACTGCCATTG+TGG | + | chr6_1:49011666-49011685 | None:intergenic | 50.0% | |
| CGCAATTGCGGCTGCAATAT+AGG | + | chr6_1:49011696-49011715 | None:intergenic | 50.0% | |
| CCAGTCTACAGTCGCAATTG+CGG | + | chr6_1:49011708-49011727 | None:intergenic | 50.0% | |
| GCAGTAGCTGTCTGTAACAC+AGG | + | chr6_1:49011895-49011914 | None:intergenic | 50.0% | |
| AAGGCAACAGTATGACCAGC+AGG | + | chr6_1:49012060-49012079 | None:intergenic | 50.0% | |
| TGCTGGTCATACTGTTGCCT+TGG | - | chr6_1:49012059-49012078 | Msa0887440:intron | 50.0% | |
| !! | TGTTGCCTTGGTCTTGATGC+AGG | - | chr6_1:49012071-49012090 | Msa0887440:intron | 50.0% |
| TTTGTGGTGGTTGGAGCTAG+TGG | - | chr6_1:49012512-49012531 | Msa0887440:intron | 50.0% | |
| CCCTACAACAGCTTGTGGAA+TGG | - | chr6_1:49012688-49012707 | Msa0887440:CDS | 50.0% | |
| GCCATTCCACAAGCTGTTGT+AGG | + | chr6_1:49012692-49012711 | None:intergenic | 50.0% | |
| GAATGGCTAAGGCTAAAGGC+TGG | - | chr6_1:49012705-49012724 | Msa0887440:CDS | 50.0% | |
| CAGTCACAGGTGGGTGTTTG+AGG | + | chr6_1:49008525-49008544 | None:intergenic | 55.0% | |
| GGAGAGAGAACAGTCACAGG+TGG | + | chr6_1:49008535-49008554 | None:intergenic | 55.0% | |
| GGTGGAGAGAGAACAGTCAC+AGG | + | chr6_1:49008538-49008557 | None:intergenic | 55.0% | |
| ! | GATACGTGGCGTGATGGGAT+TGG | + | chr6_1:49008565-49008584 | None:intergenic | 55.0% |
| GGAGTGATACGTGGCGTGAT+GGG | + | chr6_1:49008570-49008589 | None:intergenic | 55.0% | |
| AGAAACGGACACCACGACAC+TGG | + | chr6_1:49010124-49010143 | None:intergenic | 55.0% | |
| TGAGGTCAGTGTGGCCACAA+CGG | - | chr6_1:49010599-49010618 | Msa0887440:intron | 55.0% | |
| CAACTCCCATTAGTGGCTGC+AGG | + | chr6_1:49010862-49010881 | None:intergenic | 55.0% | |
| !! | GTTGCCATTTCAGAGGCGCT+TGG | - | chr6_1:49011167-49011186 | Msa0887440:CDS | 55.0% |
| GTGGGCAAATGTGGCCACAA+TGG | - | chr6_1:49011649-49011668 | Msa0887440:CDS | 55.0% | |
| CCGCAATTGCGACTGTAGAC+TGG | - | chr6_1:49011705-49011724 | Msa0887440:intron | 55.0% | |
| ! | CGTGATGGGATTGGGTGTGG+TGG | + | chr6_1:49008556-49008575 | None:intergenic | 60.0% |
| ! | TGGCGTGATGGGATTGGGTG+TGG | + | chr6_1:49008559-49008578 | None:intergenic | 60.0% |
| CGGAGTGATACGTGGCGTGA+TGG | + | chr6_1:49008571-49008590 | None:intergenic | 60.0% | |
| TGCGGCTGTGGATGCAGTTG+TGG | - | chr6_1:49009367-49009386 | Msa0887440:intron | 60.0% | |
| !! | GTTGGTGGTGCAGTCTCTGC+GGG | + | chr6_1:49011287-49011306 | None:intergenic | 60.0% |
| !! | GGTTGGTGGTGCAGTCTCTG+CGG | + | chr6_1:49011288-49011307 | None:intergenic | 60.0% |
| GAGACTGCACCACCAACCAC+TGG | - | chr6_1:49011290-49011309 | Msa0887440:intron | 60.0% | |
| GGTCAGTGTGGCCACAACGG+TGG | - | chr6_1:49010602-49010621 | Msa0887440:intron | 65.0% | |
| GGCGGCCCTACAACAGCTTG+TGG | - | chr6_1:49012683-49012702 | Msa0887440:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 49008431 | 49013011 | 49008431 | ID=Msa0887440;Name=Msa0887440 |
| chr6_1 | mRNA | 49008431 | 49013011 | 49008431 | ID=Msa0887440-mRNA-1;Parent=Msa0887440;Name=Msa0887440-mRNA-1;_AED=0.05;_eAED=0.05;_QI=83|0.6|0.66|1|1|1|6|182|407 |
| chr6_1 | exon | 49008431 | 49008936 | 49008431 | ID=Msa0887440-mRNA-1:exon:10175;Parent=Msa0887440-mRNA-1 |
| chr6_1 | exon | 49009446 | 49009591 | 49009446 | ID=Msa0887440-mRNA-1:exon:10174;Parent=Msa0887440-mRNA-1 |
| chr6_1 | exon | 49010131 | 49010286 | 49010131 | ID=Msa0887440-mRNA-1:exon:10173;Parent=Msa0887440-mRNA-1 |
| chr6_1 | exon | 49011112 | 49011222 | 49011112 | ID=Msa0887440-mRNA-1:exon:10172;Parent=Msa0887440-mRNA-1 |
| chr6_1 | exon | 49011504 | 49011688 | 49011504 | ID=Msa0887440-mRNA-1:exon:10171;Parent=Msa0887440-mRNA-1 |
| chr6_1 | exon | 49012627 | 49013011 | 49012627 | ID=Msa0887440-mRNA-1:exon:10170;Parent=Msa0887440-mRNA-1 |
| chr6_1 | five_prime_UTR | 49012929 | 49013011 | 49012929 | ID=Msa0887440-mRNA-1:five_prime_utr;Parent=Msa0887440-mRNA-1 |
| chr6_1 | CDS | 49012627 | 49012928 | 49012627 | ID=Msa0887440-mRNA-1:cds;Parent=Msa0887440-mRNA-1 |
| chr6_1 | CDS | 49011504 | 49011688 | 49011504 | ID=Msa0887440-mRNA-1:cds;Parent=Msa0887440-mRNA-1 |
| chr6_1 | CDS | 49011112 | 49011222 | 49011112 | ID=Msa0887440-mRNA-1:cds;Parent=Msa0887440-mRNA-1 |
| chr6_1 | CDS | 49010131 | 49010286 | 49010131 | ID=Msa0887440-mRNA-1:cds;Parent=Msa0887440-mRNA-1 |
| chr6_1 | CDS | 49009446 | 49009591 | 49009446 | ID=Msa0887440-mRNA-1:cds;Parent=Msa0887440-mRNA-1 |
| chr6_1 | CDS | 49008613 | 49008936 | 49008613 | ID=Msa0887440-mRNA-1:cds;Parent=Msa0887440-mRNA-1 |
| chr6_1 | three_prime_UTR | 49008431 | 49008612 | 49008431 | ID=Msa0887440-mRNA-1:three_prime_utr;Parent=Msa0887440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
