Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0905220 | XP_003618480.2 | 78.704 | 216 | 12 | 1 | 1 | 182 | 34 | 249 | 4.88e-112 | 331 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0905220 | sp|P04782|CB24_PETSP | 75.115 | 217 | 19 | 2 | 1 | 182 | 34 | 250 | 2.99e-109 | 317 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002690 | Msa0905220 | 0.839364 | 1.656014e-57 | -8.615850e-47 |
| Msa0002700 | Msa0905220 | 0.844030 | 9.726640e-59 | -8.615850e-47 |
| Msa0004180 | Msa0905220 | 0.804478 | 2.119475e-49 | -8.615850e-47 |
| Msa0018610 | Msa0905220 | 0.833967 | 3.932692e-56 | -8.615850e-47 |
| Msa0021570 | Msa0905220 | 0.854876 | 9.192221e-62 | -8.615850e-47 |
| Msa0024070 | Msa0905220 | 0.826918 | 2.083647e-54 | -8.615850e-47 |
| Msa0027020 | Msa0905220 | 0.818634 | 1.769610e-52 | -8.615850e-47 |
| Msa0028940 | Msa0905220 | 0.805685 | 1.184462e-49 | -8.615850e-47 |
| Msa0044700 | Msa0905220 | 0.806534 | 7.850966e-50 | -8.615850e-47 |
| Msa0046020 | Msa0905220 | 0.809944 | 1.473100e-50 | -8.615850e-47 |
| Msa0047400 | Msa0905220 | 0.826386 | 2.791546e-54 | -8.615850e-47 |
| Msa0058140 | Msa0905220 | 0.812902 | 3.355404e-51 | -8.615850e-47 |
| Msa0058970 | Msa0905220 | 0.821690 | 3.530130e-53 | -8.615850e-47 |
| Msa0064490 | Msa0905220 | 0.807267 | 5.494622e-50 | -8.615850e-47 |
| Msa0069590 | Msa0905220 | 0.836140 | 1.113779e-56 | -8.615850e-47 |
| Msa0075080 | Msa0905220 | 0.811121 | 8.203231e-51 | -8.615850e-47 |
| Msa0093360 | Msa0905220 | 0.814299 | 1.653852e-51 | -8.615850e-47 |
| Msa0116780 | Msa0905220 | 0.845410 | 4.133473e-59 | -8.615850e-47 |
| Msa0120100 | Msa0905220 | 0.801383 | 9.240939e-49 | -8.615850e-47 |
| Msa0120160 | Msa0905220 | 0.803167 | 3.966311e-49 | -8.615850e-47 |
| Msa0605210 | Msa0905220 | 0.816990 | 4.157679e-52 | -8.615850e-47 |
| Msa0606340 | Msa0905220 | 0.812726 | 3.667711e-51 | -8.615850e-47 |
| Msa0606350 | Msa0905220 | 0.823168 | 1.601197e-53 | -8.615850e-47 |
| Msa0607070 | Msa0905220 | 0.836069 | 1.161126e-56 | -8.615850e-47 |
| Msa0608720 | Msa0905220 | 0.806343 | 8.613822e-50 | -8.615850e-47 |
| Msa0612950 | Msa0905220 | 0.833456 | 5.279401e-56 | -8.615850e-47 |
| Msa0616570 | Msa0905220 | 0.804133 | 2.500905e-49 | -8.615850e-47 |
| Msa0644610 | Msa0905220 | 0.818401 | 1.998007e-52 | -8.615850e-47 |
| Msa0646310 | Msa0905220 | 0.828984 | 6.635035e-55 | -8.615850e-47 |
| Msa0649140 | Msa0905220 | 0.801643 | 8.173197e-49 | -8.615850e-47 |
| Msa0654850 | Msa0905220 | 0.801603 | 8.328555e-49 | -8.615850e-47 |
| Msa0655980 | Msa0905220 | 0.809541 | 1.798179e-50 | -8.615850e-47 |
| Msa0661540 | Msa0905220 | 0.811259 | 7.658038e-51 | -8.615850e-47 |
| Msa0663540 | Msa0905220 | 0.820182 | 7.850483e-53 | -8.615850e-47 |
| Msa0667670 | Msa0905220 | 0.810688 | 1.018066e-50 | -8.615850e-47 |
| Msa0679880 | Msa0905220 | 0.808661 | 2.775509e-50 | -8.615850e-47 |
| Msa0685810 | Msa0905220 | 0.801175 | 1.019418e-48 | -8.615850e-47 |
| Msa0687650 | Msa0905220 | 0.829605 | 4.689207e-55 | -8.615850e-47 |
| Msa0687740 | Msa0905220 | 0.829104 | 6.202362e-55 | -8.615850e-47 |
| Msa0695250 | Msa0905220 | 0.800587 | 1.343693e-48 | -8.615850e-47 |
| Msa0698510 | Msa0905220 | 0.802556 | 5.303380e-49 | -8.615850e-47 |
| Msa0698680 | Msa0905220 | 0.803498 | 3.387059e-49 | -8.615850e-47 |
| Msa0699900 | Msa0905220 | 0.801542 | 8.572122e-49 | -8.615850e-47 |
| Msa0711510 | Msa0905220 | 0.806956 | 6.393428e-50 | -8.615850e-47 |
| Msa0711860 | Msa0905220 | 0.833586 | 4.898678e-56 | -8.615850e-47 |
| Msa0745270 | Msa0905220 | 0.806565 | 7.733542e-50 | -8.615850e-47 |
| Msa0751640 | Msa0905220 | 0.805760 | 1.142588e-49 | -8.615850e-47 |
| Msa0755550 | Msa0905220 | 0.806490 | 8.019310e-50 | -8.615850e-47 |
| Msa0762480 | Msa0905220 | 0.804019 | 2.641171e-49 | -8.615850e-47 |
| Msa0772530 | Msa0905220 | 0.832286 | 1.030713e-55 | -8.615850e-47 |
| Msa0788450 | Msa0905220 | 0.832117 | 1.135235e-55 | -8.615850e-47 |
| Msa0792490 | Msa0905220 | 0.801707 | 7.930046e-49 | -8.615850e-47 |
| Msa0793130 | Msa0905220 | 0.807408 | 5.128795e-50 | -8.615850e-47 |
| Msa0798500 | Msa0905220 | 0.809417 | 1.912238e-50 | -8.615850e-47 |
| Msa0811710 | Msa0905220 | 0.821737 | 3.444509e-53 | -8.615850e-47 |
| Msa0825570 | Msa0905220 | 0.831927 | 1.264300e-55 | -8.615850e-47 |
| Msa0826540 | Msa0905220 | 0.832151 | 1.113356e-55 | -8.615850e-47 |
| Msa0829210 | Msa0905220 | 0.819427 | 1.167823e-52 | -8.615850e-47 |
| Msa0831710 | Msa0905220 | 0.819662 | 1.032565e-52 | -8.615850e-47 |
| Msa0833980 | Msa0905220 | 0.802458 | 5.557853e-49 | -8.615850e-47 |
| Msa0837040 | Msa0905220 | 0.830385 | 3.025996e-55 | -8.615850e-47 |
| Msa0842370 | Msa0905220 | 0.806470 | 8.098589e-50 | -8.615850e-47 |
| Msa0122930 | Msa0905220 | 0.805735 | 1.156307e-49 | -8.615850e-47 |
| Msa0124460 | Msa0905220 | 0.805589 | 1.241218e-49 | -8.615850e-47 |
| Msa0127110 | Msa0905220 | 0.815998 | 6.935799e-52 | -8.615850e-47 |
| Msa0147070 | Msa0905220 | 0.811460 | 6.922990e-51 | -8.615850e-47 |
| Msa0167160 | Msa0905220 | 0.806344 | 8.611920e-50 | -8.615850e-47 |
| Msa0167570 | Msa0905220 | 0.813592 | 2.367879e-51 | -8.615850e-47 |
| Msa0168950 | Msa0905220 | 0.808015 | 3.811829e-50 | -8.615850e-47 |
| Msa0170550 | Msa0905220 | 0.801957 | 7.045924e-49 | -8.615850e-47 |
| Msa0182940 | Msa0905220 | 0.823316 | 1.479138e-53 | -8.615850e-47 |
| Msa0185770 | Msa0905220 | 0.803393 | 3.561992e-49 | -8.615850e-47 |
| Msa0195850 | Msa0905220 | 0.806854 | 6.720726e-50 | -8.615850e-47 |
| Msa0196620 | Msa0905220 | 0.817365 | 3.425218e-52 | -8.615850e-47 |
| Msa0211590 | Msa0905220 | 0.812764 | 3.598172e-51 | -8.615850e-47 |
| Msa0216900 | Msa0905220 | 0.839275 | 1.746498e-57 | -8.615850e-47 |
| Msa0225280 | Msa0905220 | 0.820926 | 5.298695e-53 | -8.615850e-47 |
| Msa0232160 | Msa0905220 | 0.828523 | 8.573422e-55 | -8.615850e-47 |
| Msa0234930 | Msa0905220 | 0.807095 | 5.975877e-50 | -8.615850e-47 |
| Msa0237690 | Msa0905220 | 0.805271 | 1.446712e-49 | -8.615850e-47 |
| Msa0238530 | Msa0905220 | 0.806173 | 9.356235e-50 | -8.615850e-47 |
| Msa0368450 | Msa0905220 | 0.828766 | 7.488706e-55 | -8.615850e-47 |
| Msa0369080 | Msa0905220 | 0.803559 | 3.290208e-49 | -8.615850e-47 |
| Msa0369770 | Msa0905220 | 0.805242 | 1.467169e-49 | -8.615850e-47 |
| Msa0371050 | Msa0905220 | 0.810343 | 1.208616e-50 | -8.615850e-47 |
| Msa0377990 | Msa0905220 | 0.822919 | 1.830280e-53 | -8.615850e-47 |
| Msa0380470 | Msa0905220 | 0.826210 | 3.073168e-54 | -8.615850e-47 |
| Msa0388000 | Msa0905220 | 0.827314 | 1.675712e-54 | -8.615850e-47 |
| Msa0400890 | Msa0905220 | 0.830375 | 3.043103e-55 | -8.615850e-47 |
| Msa0402490 | Msa0905220 | 0.814766 | 1.303737e-51 | -8.615850e-47 |
| Msa0402630 | Msa0905220 | 0.810275 | 1.250022e-50 | -8.615850e-47 |
| Msa0404710 | Msa0905220 | 0.806557 | 7.762137e-50 | -8.615850e-47 |
| Msa0415760 | Msa0905220 | 0.816391 | 5.664427e-52 | -8.615850e-47 |
| Msa0416430 | Msa0905220 | 0.804031 | 2.626006e-49 | -8.615850e-47 |
| Msa0417140 | Msa0905220 | 0.813194 | 2.895565e-51 | -8.615850e-47 |
| Msa0427230 | Msa0905220 | 0.806926 | 6.488727e-50 | -8.615850e-47 |
| Msa0427600 | Msa0905220 | 0.817923 | 2.563586e-52 | -8.615850e-47 |
| Msa0429990 | Msa0905220 | 0.829979 | 3.800388e-55 | -8.615850e-47 |
| Msa0432490 | Msa0905220 | 0.819927 | 8.981846e-53 | -8.615850e-47 |
| Msa0436660 | Msa0905220 | 0.814223 | 1.718417e-51 | -8.615850e-47 |
| Msa0437820 | Msa0905220 | 0.815096 | 1.101165e-51 | -8.615850e-47 |
| Msa0439090 | Msa0905220 | 0.817778 | 2.763753e-52 | -8.615850e-47 |
| Msa0439130 | Msa0905220 | 0.836439 | 9.353168e-57 | -8.615850e-47 |
| Msa0440220 | Msa0905220 | 0.806210 | 9.187638e-50 | -8.615850e-47 |
| Msa0447810 | Msa0905220 | 0.813966 | 1.958557e-51 | -8.615850e-47 |
| Msa0448880 | Msa0905220 | 0.801695 | 7.976916e-49 | -8.615850e-47 |
| Msa0450920 | Msa0905220 | 0.805905 | 1.065199e-49 | -8.615850e-47 |
| Msa0457600 | Msa0905220 | 0.828858 | 7.114367e-55 | -8.615850e-47 |
| Msa0460510 | Msa0905220 | 0.814866 | 1.238839e-51 | -8.615850e-47 |
| Msa0461620 | Msa0905220 | 0.829022 | 6.493810e-55 | -8.615850e-47 |
| Msa0463030 | Msa0905220 | 0.816941 | 4.264725e-52 | -8.615850e-47 |
| Msa0463980 | Msa0905220 | 0.806519 | 7.906689e-50 | -8.615850e-47 |
| Msa0473740 | Msa0905220 | 0.805789 | 1.126609e-49 | -8.615850e-47 |
| Msa0476890 | Msa0905220 | 0.817341 | 3.466787e-52 | -8.615850e-47 |
| Msa0240630 | Msa0905220 | 0.838724 | 2.425629e-57 | -8.615850e-47 |
| Msa0245690 | Msa0905220 | 0.812310 | 4.521254e-51 | -8.615850e-47 |
| Msa0252150 | Msa0905220 | 0.827827 | 1.261626e-54 | -8.615850e-47 |
| Msa0266330 | Msa0905220 | 0.829287 | 5.599963e-55 | -8.615850e-47 |
| Msa0273270 | Msa0905220 | 0.805412 | 1.351469e-49 | -8.615850e-47 |
| Msa0275260 | Msa0905220 | 0.806162 | 9.405170e-50 | -8.615850e-47 |
| Msa0276030 | Msa0905220 | 0.810656 | 1.034232e-50 | -8.615850e-47 |
| Msa0288300 | Msa0905220 | 0.813991 | 1.933656e-51 | -8.615850e-47 |
| Msa0290590 | Msa0905220 | 0.804113 | 2.524529e-49 | -8.615850e-47 |
| Msa0296100 | Msa0905220 | 0.862238 | 5.838907e-64 | -8.615850e-47 |
| Msa0298820 | Msa0905220 | 0.838763 | 2.370520e-57 | -8.615850e-47 |
| Msa0310270 | Msa0905220 | 0.828178 | 1.038423e-54 | -8.615850e-47 |
| Msa0317820 | Msa0905220 | 0.814392 | 1.576856e-51 | -8.615850e-47 |
| Msa0318320 | Msa0905220 | 0.801584 | 8.403564e-49 | -8.615850e-47 |
| Msa0329050 | Msa0905220 | 0.806087 | 9.754869e-50 | -8.615850e-47 |
| Msa0334480 | Msa0905220 | 0.835277 | 1.842327e-56 | -8.615850e-47 |
| Msa0341950 | Msa0905220 | 0.831845 | 1.324843e-55 | -8.615850e-47 |
| Msa0353890 | Msa0905220 | 0.812368 | 4.391214e-51 | -8.615850e-47 |
| Msa0358750 | Msa0905220 | 0.830699 | 2.535221e-55 | -8.615850e-47 |
| Msa0363090 | Msa0905220 | 0.818821 | 1.604520e-52 | -8.615850e-47 |
| Msa0363180 | Msa0905220 | 0.822696 | 2.063631e-53 | -8.615850e-47 |
| Msa0485350 | Msa0905220 | 0.803189 | 3.924680e-49 | -8.615850e-47 |
| Msa0497140 | Msa0905220 | 0.800151 | 1.649059e-48 | -8.615850e-47 |
| Msa0497280 | Msa0905220 | 0.804342 | 2.262062e-49 | -8.615850e-47 |
| Msa0500580 | Msa0905220 | 0.824580 | 7.474455e-54 | -8.615850e-47 |
| Msa0506700 | Msa0905220 | 0.810192 | 1.302507e-50 | -8.615850e-47 |
| Msa0507960 | Msa0905220 | 0.835343 | 1.773404e-56 | -8.615850e-47 |
| Msa0509530 | Msa0905220 | 0.805333 | 1.404066e-49 | -8.615850e-47 |
| Msa0517820 | Msa0905220 | 0.809252 | 2.074233e-50 | -8.615850e-47 |
| Msa0518150 | Msa0905220 | 0.820446 | 6.828984e-53 | -8.615850e-47 |
| Msa0521260 | Msa0905220 | 0.814862 | 1.241295e-51 | -8.615850e-47 |
| Msa0527420 | Msa0905220 | 0.824995 | 5.965345e-54 | -8.615850e-47 |
| Msa0532870 | Msa0905220 | 0.828364 | 9.364924e-55 | -8.615850e-47 |
| Msa0549700 | Msa0905220 | 0.824918 | 6.221441e-54 | -8.615850e-47 |
| Msa0550980 | Msa0905220 | 0.814356 | 1.606598e-51 | -8.615850e-47 |
| Msa0550990 | Msa0905220 | 0.815317 | 9.834979e-52 | -8.615850e-47 |
| Msa0552920 | Msa0905220 | 0.830495 | 2.843470e-55 | -8.615850e-47 |
| Msa0555210 | Msa0905220 | 0.828754 | 7.540246e-55 | -8.615850e-47 |
| Msa0557440 | Msa0905220 | 0.800389 | 1.474589e-48 | -8.615850e-47 |
| Msa0561450 | Msa0905220 | 0.826893 | 2.112147e-54 | -8.615850e-47 |
| Msa0567190 | Msa0905220 | 0.804226 | 2.391793e-49 | -8.615850e-47 |
| Msa0864820 | Msa0905220 | 0.812005 | 5.270458e-51 | -8.615850e-47 |
| Msa0868500 | Msa0905220 | 0.835430 | 1.685527e-56 | -8.615850e-47 |
| Msa0868510 | Msa0905220 | 0.845982 | 2.891086e-59 | -8.615850e-47 |
| Msa0868520 | Msa0905220 | 0.836529 | 8.870863e-57 | -8.615850e-47 |
| Msa0869420 | Msa0905220 | 0.835848 | 1.321202e-56 | -8.615850e-47 |
| Msa0871840 | Msa0905220 | 0.885063 | 1.122841e-71 | -8.615850e-47 |
| Msa0871850 | Msa0905220 | 0.875147 | 3.874735e-68 | -8.615850e-47 |
| Msa0871860 | Msa0905220 | 0.907911 | 3.034703e-81 | -8.615850e-47 |
| Msa0882480 | Msa0905220 | 0.808661 | 2.775688e-50 | -8.615850e-47 |
| Msa0905190 | Msa0905220 | 0.848122 | 7.495017e-60 | -8.615850e-47 |
| Msa0905200 | Msa0905220 | 0.858182 | 9.820682e-63 | -8.615850e-47 |
| Msa0905210 | Msa0905220 | 0.894922 | 1.562476e-75 | -8.615850e-47 |
| Msa0905220 | Msa0929440 | 0.802620 | 5.146484e-49 | -8.615850e-47 |
| Msa0905220 | Msa0933320 | 0.814877 | 1.231926e-51 | -8.615850e-47 |
| Msa0905220 | Msa0934100 | 0.812479 | 4.153878e-51 | -8.615850e-47 |
| Msa0905220 | Msa0934800 | 0.825150 | 5.482813e-54 | -8.615850e-47 |
| Msa0905220 | Msa0937180 | 0.905912 | 2.599224e-80 | -8.615850e-47 |
| Msa0905220 | Msa0937190 | 0.911172 | 8.210125e-83 | -8.615850e-47 |
| Msa0905220 | Msa0937200 | 0.892491 | 1.511610e-74 | -8.615850e-47 |
| Msa0905220 | Msa0938150 | 0.803208 | 3.890157e-49 | -8.615850e-47 |
| Msa0905220 | Msa0941420 | 0.807920 | 3.992588e-50 | -8.615850e-47 |
| Msa0905220 | Msa0945160 | 0.802077 | 6.656035e-49 | -8.615850e-47 |
| Msa0905220 | Msa0958960 | 0.801503 | 8.733782e-49 | -8.615850e-47 |
| Msa0905220 | Msa0971100 | 0.804902 | 1.728712e-49 | -8.615850e-47 |
| Msa0905220 | Msa0971690 | 0.815760 | 7.839144e-52 | -8.615850e-47 |
| Msa0905220 | Msa0974470 | 0.875652 | 2.602447e-68 | -8.615850e-47 |
| Msa0905220 | Msa0974480 | 0.883485 | 4.310567e-71 | -8.615850e-47 |
| Msa0905220 | Msa0978540 | 0.826728 | 2.313853e-54 | -8.615850e-47 |
| Msa0905220 | Msa0978550 | 0.844793 | 6.068172e-59 | -8.615850e-47 |
| Msa0905220 | Msa0978560 | 0.833204 | 6.101097e-56 | -8.615850e-47 |
| Msa0905220 | Msa0984230 | 0.805428 | 1.341595e-49 | -8.615850e-47 |
| Msa0905220 | Msa0993280 | 0.804392 | 2.208306e-49 | -8.615850e-47 |
| Msa0905220 | Msa0993590 | 0.830182 | 3.390955e-55 | -8.615850e-47 |
| Msa0905220 | Msa1002550 | 0.817405 | 3.355137e-52 | -8.615850e-47 |
| Msa0905220 | Msa1031190 | 0.820507 | 6.611909e-53 | -8.615850e-47 |
| Msa0905220 | Msa1032760 | 0.807278 | 5.465849e-50 | -8.615850e-47 |
| Msa0905220 | Msa1032790 | 0.857799 | 1.276163e-62 | -8.615850e-47 |
| Msa0905220 | Msa1033250 | 0.800136 | 1.659975e-48 | -8.615850e-47 |
| Msa0905220 | Msa1045750 | 0.813135 | 2.982996e-51 | -8.615850e-47 |
| Msa0905220 | Msa1047390 | 0.819983 | 8.721555e-53 | -8.615850e-47 |
| Msa0905220 | Msa1052800 | 0.821358 | 4.212564e-53 | -8.615850e-47 |
| Msa0905220 | Msa1058550 | 0.803465 | 3.440890e-49 | -8.615850e-47 |
| Msa0905220 | Msa1070370 | 0.821018 | 5.047097e-53 | -8.615850e-47 |
| Msa0905220 | Msa1070710 | 0.800674 | 1.290229e-48 | -8.615850e-47 |
| Msa0905220 | Msa1072850 | 0.806341 | 8.623463e-50 | -8.615850e-47 |
| Msa0905220 | Msa1091400 | 0.824922 | 6.205941e-54 | -8.615850e-47 |
| Msa0905220 | Msa1091460 | 0.824091 | 9.739724e-54 | -8.615850e-47 |
| Msa0905220 | Msa1119420 | 0.821944 | 3.083540e-53 | -8.615850e-47 |
| Msa0905220 | Msa1134800 | 0.817387 | 3.385226e-52 | -8.615850e-47 |
| Msa0905220 | Msa1134840 | 0.835482 | 1.635440e-56 | -8.615850e-47 |
| Msa0905220 | Msa1158180 | 0.821644 | 3.619229e-53 | -8.615850e-47 |
| Msa0905220 | Msa1161550 | 0.802487 | 5.481587e-49 | -8.615850e-47 |
| Msa0905220 | Msa1171640 | 0.808585 | 2.881411e-50 | -8.615850e-47 |
| Msa0905220 | Msa1175340 | 0.831961 | 1.240410e-55 | -8.615850e-47 |
| Msa0905220 | Msa1177300 | 0.822120 | 2.807205e-53 | -8.615850e-47 |
| Msa0905220 | Msa1184100 | 0.803581 | 3.255582e-49 | -8.615850e-47 |
| Msa0905220 | Msa1197740 | 0.801830 | 7.480665e-49 | -8.615850e-47 |
| Msa0905220 | Msa1199700 | 0.801201 | 1.006699e-48 | -8.615850e-47 |
| Msa0905220 | Msa1203320 | 0.813542 | 2.428747e-51 | -8.615850e-47 |
| Msa0905220 | Msa1211930 | 0.860320 | 2.242683e-63 | -8.615850e-47 |
| Msa0905220 | Msa1212070 | 0.825340 | 4.945934e-54 | -8.615850e-47 |
| Msa0905220 | Msa1223520 | 0.802192 | 6.304487e-49 | -8.615850e-47 |
| Msa0905220 | Msa1228260 | 0.819240 | 1.288380e-52 | -8.615850e-47 |
| Msa0905220 | Msa1235620 | 0.829260 | 5.685787e-55 | -8.615850e-47 |
| Msa0905220 | Msa1244940 | 0.809399 | 1.929292e-50 | -8.615850e-47 |
| Msa0905220 | Msa1245870 | 0.806755 | 7.051528e-50 | -8.615850e-47 |
| Msa0905220 | Msa1250490 | 0.801717 | 7.894551e-49 | -8.615850e-47 |
| Msa0905220 | Msa1251440 | 0.800874 | 1.174334e-48 | -8.615850e-47 |
| Msa0905220 | Msa1263600 | 0.809786 | 1.593239e-50 | -8.615850e-47 |
| Msa0905220 | Msa1266750 | 0.814226 | 1.715891e-51 | -8.615850e-47 |
| Msa0905220 | Msa1271220 | 0.817824 | 2.699211e-52 | -8.615850e-47 |
| Msa0905220 | Msa1277270 | 0.804153 | 2.476755e-49 | -8.615850e-47 |
| Msa0905220 | Msa1303040 | 0.819193 | 1.320691e-52 | -8.615850e-47 |
| Msa0905220 | Msa1303690 | 0.818900 | 1.540068e-52 | -8.615850e-47 |
| Msa0905220 | Msa1308430 | 0.822628 | 2.139578e-53 | -8.615850e-47 |
| Msa0905220 | Msa1317090 | 0.843896 | 1.057057e-58 | -8.615850e-47 |
| Msa0905220 | Msa1334690 | 0.805378 | 1.373948e-49 | -8.615850e-47 |
| Msa0905220 | Msa1341850 | 0.839325 | 1.695526e-57 | -8.615850e-47 |
| Msa0905220 | Msa1348180 | 0.804885 | 1.742456e-49 | -8.615850e-47 |
| Msa0905220 | Msa1350130 | 0.808100 | 3.655917e-50 | -8.615850e-47 |
| Msa0905220 | Msa1350590 | 0.801779 | 7.664192e-49 | -8.615850e-47 |
| Msa0905220 | Msa1363170 | 0.819236 | 1.291453e-52 | -8.615850e-47 |
| Msa0905220 | Msa1372460 | 0.834356 | 3.142408e-56 | -8.615850e-47 |
| Msa0905220 | Msa1373420 | 0.806732 | 7.132318e-50 | -8.615850e-47 |
| Msa0905220 | Msa1373930 | 0.802080 | 6.648060e-49 | -8.615850e-47 |
| Msa0905220 | Msa1375120 | 0.801102 | 1.054675e-48 | -8.615850e-47 |
| Msa0905220 | Msa1381830 | 0.815515 | 8.885894e-52 | -8.615850e-47 |
| Msa0905220 | Msa1386820 | 0.845079 | 5.077819e-59 | -8.615850e-47 |
| Msa0905220 | Msa1405990 | 0.818587 | 1.813916e-52 | -8.615850e-47 |
| Msa0905220 | Msa1419760 | 0.820311 | 7.333942e-53 | -8.615850e-47 |
| Msa0905220 | Msa1420590 | 0.829173 | 5.970097e-55 | -8.615850e-47 |
| Msa0905220 | Msa1423560 | 0.815650 | 8.292043e-52 | -8.615850e-47 |
| Msa0905220 | Msa1424490 | 0.809528 | 1.810213e-50 | -8.615850e-47 |
| Msa0905220 | Msa1425050 | 0.801241 | 9.880795e-49 | -8.615850e-47 |
| Msa0905220 | Msa1425530 | 0.830660 | 2.591956e-55 | -8.615850e-47 |
| Msa0905220 | Msa1434860 | 0.827906 | 1.207968e-54 | -8.615850e-47 |
| Msa0905220 | Msa1440140 | 0.848439 | 6.125689e-60 | -8.615850e-47 |
| Msa0905220 | Msa1444070 | 0.828616 | 8.143472e-55 | -8.615850e-47 |
| Msa0905220 | Msa1444130 | 0.808729 | 2.683946e-50 | -8.615850e-47 |
| Msa0905220 | Msa1444690 | 0.811169 | 8.009634e-51 | -8.615850e-47 |
| Msa0905220 | Msa1444750 | 0.807983 | 3.871727e-50 | -8.615850e-47 |
| Msa0905220 | Msa1455560 | 0.801479 | 8.832279e-49 | -8.615850e-47 |
| Msa0905220 | Msa1461840 | 0.814236 | 1.707681e-51 | -8.615850e-47 |
| Msa0905220 | Msa1462700 | 0.825635 | 4.209576e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0905220 | MtrunA17_Chr6g0453151 | 77.778 | 216 | 14 | 1 | 1 | 182 | 101 | 316 | 2.84e-115 | 331 |
| Msa0905220 | MtrunA17_Chr6g0464511 | 88.398 | 181 | 20 | 1 | 2 | 182 | 17 | 196 | 5.95e-114 | 323 |
| Msa0905220 | MtrunA17_Chr6g0453141 | 77.315 | 216 | 15 | 1 | 1 | 182 | 34 | 249 | 7.29e-114 | 325 |
| Msa0905220 | MtrunA17_Chr6g0453161 | 79.167 | 216 | 11 | 1 | 1 | 182 | 36 | 251 | 1.03e-112 | 332 |
| Msa0905220 | MtrunA17_Chr6g0453161 | 78.704 | 216 | 12 | 1 | 1 | 182 | 301 | 516 | 4.72e-112 | 330 |
| Msa0905220 | MtrunA17_Chr4g0051941 | 76.037 | 217 | 17 | 2 | 1 | 182 | 34 | 250 | 1.62e-109 | 314 |
| Msa0905220 | MtrunA17_Chr6g0453181 | 77.315 | 216 | 15 | 1 | 1 | 182 | 34 | 249 | 2.36e-108 | 311 |
| Msa0905220 | MtrunA17_Chr5g0447531 | 66.204 | 216 | 36 | 3 | 1 | 182 | 37 | 249 | 1.47e-94 | 276 |
| Msa0905220 | MtrunA17_Chr2g0318521 | 64.532 | 203 | 36 | 2 | 16 | 182 | 46 | 248 | 4.74e-82 | 244 |
| Msa0905220 | MtrunA17_Chr6g0453171 | 86.585 | 82 | 11 | 0 | 101 | 182 | 1 | 82 | 5.05e-44 | 142 |
| Msa0905220 | MtrunA17_Chr6g0476641 | 39.286 | 224 | 89 | 5 | 16 | 197 | 71 | 289 | 2.04e-36 | 129 |
| Msa0905220 | MtrunA17_Chr1g0157481 | 40.639 | 219 | 85 | 6 | 14 | 187 | 105 | 323 | 8.95e-35 | 125 |
| Msa0905220 | MtrunA17_Chr6g0462031 | 34.078 | 179 | 84 | 5 | 33 | 182 | 56 | 229 | 6.48e-19 | 81.6 |
| Msa0905220 | MtrunA17_Chr8g0345631 | 33.824 | 204 | 97 | 9 | 19 | 187 | 61 | 261 | 8.75e-18 | 79.3 |
| Msa0905220 | MtrunA17_Chr3g0133901 | 32.461 | 191 | 93 | 5 | 33 | 187 | 68 | 258 | 1.01e-17 | 79.0 |
| Msa0905220 | MtrunA17_Chr5g0448421 | 31.980 | 197 | 83 | 7 | 29 | 175 | 63 | 258 | 8.74e-17 | 76.6 |
| Msa0905220 | MtrunA17_Chr5g0448411 | 29.592 | 196 | 89 | 6 | 29 | 175 | 61 | 256 | 3.89e-16 | 74.7 |
| Msa0905220 | MtrunA17_Chr4g0006181 | 42.735 | 117 | 54 | 5 | 75 | 187 | 233 | 340 | 4.36e-16 | 75.5 |
| Msa0905220 | MtrunA17_Chr2g0301081 | 31.373 | 204 | 92 | 8 | 19 | 182 | 60 | 255 | 7.24e-15 | 71.2 |
| Msa0905220 | MtrunA17_Chr3g0113311 | 44.186 | 86 | 43 | 3 | 93 | 177 | 194 | 275 | 5.43e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0905220 | AT1G29930.1 | 72.811 | 217 | 24 | 2 | 1 | 182 | 35 | 251 | 5.09e-105 | 303 |
| Msa0905220 | AT1G29920.1 | 72.811 | 217 | 24 | 2 | 1 | 182 | 35 | 251 | 5.74e-105 | 303 |
| Msa0905220 | AT1G29910.1 | 72.811 | 217 | 24 | 2 | 1 | 182 | 35 | 251 | 5.74e-105 | 303 |
| Msa0905220 | AT2G34420.1 | 73.272 | 217 | 23 | 2 | 1 | 182 | 33 | 249 | 1.29e-104 | 302 |
| Msa0905220 | AT2G34430.1 | 72.811 | 217 | 23 | 3 | 1 | 182 | 35 | 250 | 2.87e-102 | 296 |
| Msa0905220 | AT2G05100.1 | 68.421 | 209 | 29 | 3 | 1 | 175 | 37 | 242 | 2.42e-94 | 276 |
| Msa0905220 | AT2G05070.1 | 68.421 | 209 | 29 | 3 | 1 | 175 | 37 | 242 | 2.94e-94 | 276 |
| Msa0905220 | AT3G27690.2 | 67.943 | 209 | 30 | 3 | 1 | 175 | 70 | 275 | 8.87e-94 | 276 |
| Msa0905220 | AT3G27690.1 | 67.943 | 209 | 30 | 3 | 1 | 175 | 38 | 243 | 1.31e-93 | 274 |
| Msa0905220 | AT2G05100.2 | 67.647 | 204 | 29 | 3 | 1 | 170 | 37 | 237 | 4.74e-89 | 265 |
| Msa0905220 | AT5G54270.1 | 67.513 | 197 | 26 | 4 | 16 | 175 | 47 | 242 | 6.69e-81 | 242 |
| Msa0905220 | AT1G76570.1 | 38.261 | 230 | 98 | 6 | 2 | 187 | 92 | 321 | 6.90e-35 | 126 |
| Msa0905220 | AT4G10340.1 | 41.148 | 209 | 86 | 6 | 14 | 187 | 60 | 266 | 3.61e-32 | 117 |
| Msa0905220 | AT3G54890.1 | 35.196 | 179 | 82 | 5 | 33 | 182 | 55 | 228 | 3.56e-20 | 85.5 |
| Msa0905220 | AT1G45474.2 | 33.333 | 192 | 91 | 6 | 33 | 187 | 56 | 247 | 7.34e-18 | 79.7 |
| Msa0905220 | AT1G45474.1 | 33.333 | 192 | 91 | 6 | 33 | 187 | 56 | 247 | 7.34e-18 | 79.7 |
| Msa0905220 | AT1G61520.3 | 33.503 | 197 | 80 | 8 | 29 | 175 | 59 | 254 | 1.52e-17 | 79.0 |
| Msa0905220 | AT1G61520.1 | 33.503 | 197 | 80 | 8 | 29 | 175 | 59 | 254 | 1.52e-17 | 79.0 |
| Msa0905220 | AT3G61470.1 | 32.353 | 204 | 100 | 7 | 19 | 187 | 50 | 250 | 2.30e-17 | 78.2 |
| Msa0905220 | AT5G01530.1 | 44.094 | 127 | 57 | 7 | 65 | 187 | 167 | 283 | 1.63e-16 | 76.3 |
| Msa0905220 | AT3G08940.2 | 43.307 | 127 | 58 | 7 | 65 | 187 | 164 | 280 | 1.66e-15 | 73.6 |
| Msa0905220 | AT1G61520.2 | 32.796 | 186 | 74 | 8 | 40 | 175 | 15 | 199 | 1.39e-14 | 70.1 |
| Msa0905220 | AT3G47470.1 | 32.461 | 191 | 87 | 6 | 32 | 187 | 63 | 246 | 5.19e-14 | 68.9 |
| Msa0905220 | AT2G40100.1 | 40.777 | 103 | 55 | 3 | 75 | 177 | 177 | 273 | 1.71e-13 | 67.8 |
| Msa0905220 | AT1G19150.1 | 30.653 | 199 | 100 | 8 | 19 | 182 | 63 | 258 | 1.70e-12 | 65.1 |
Find 82 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAAAGCATCCTTGCTATT+TGG | 0.098078 | 6_2:+3223437 | Msa0905220:CDS |
| GGTCTCTAGTGGTCCCTTTC+CGG | 0.236919 | 6_2:-3223677 | None:intergenic |
| GGCTGTCCAAGTTATCTTAA+TGG | 0.243134 | 6_2:+3223459 | Msa0905220:CDS |
| GTCCTCCGTCACTAAAGATT+TGG | 0.289012 | 6_2:-3223381 | None:intergenic |
| TCCAGAAGGAACGTTCTTCT+TGG | 0.314639 | 6_2:-3223092 | None:intergenic |
| TTAGCTATGTTCTCGATGTT+TGG | 0.329305 | 6_2:+3223631 | Msa0905220:CDS |
| ACAAAGCATCCTTGCTATTT+GGG | 0.338109 | 6_2:+3223438 | Msa0905220:CDS |
| CTAGTAACTTTCTCACTTCC+CGG | 0.348789 | 6_2:-3223742 | None:intergenic |
| GGTGAATTTCCCGGTGATTA+TGG | 0.366933 | 6_2:+3223187 | Msa0905220:CDS |
| TTCGTTCAGGCCATTGTAAC+CGG | 0.370708 | 6_2:+3223658 | Msa0905220:CDS |
| TACCTCACTGGTGAATTTCC+CGG | 0.380935 | 6_2:+3223178 | Msa0905220:CDS |
| AAGTACTTGGGTCCATTCTC+TGG | 0.385387 | 6_2:+3223142 | Msa0905220:CDS |
| GCTGTCCAAGTTATCTTAAT+GGG | 0.390364 | 6_2:+3223460 | Msa0905220:CDS |
| ACCAAGAAGAACGTTCCTTC+TGG | 0.405063 | 6_2:+3223091 | Msa0905220:CDS |
| CAGCTCCCATTAAGATAACT+TGG | 0.409909 | 6_2:-3223465 | None:intergenic |
| GCCCAGGCGTTGTTGTTGAC+AGG | 0.410698 | 6_2:-3223699 | None:intergenic |
| TCCTCCGTCACTAAAGATTT+GGG | 0.411323 | 6_2:-3223380 | None:intergenic |
| TTCAACTCAGCAAAAGCCTC+TGG | 0.411824 | 6_2:-3223583 | None:intergenic |
| CCCAAGTACTTGACACGGTC+TGG | 0.412244 | 6_2:-3223130 | None:intergenic |
| TCCAGACCGTGTCAAGTACT+TGG | 0.414229 | 6_2:+3223129 | Msa0905220:CDS |
| AGGAGGAAGCTTTGATCCAT+TGG | 0.422685 | 6_2:+3223546 | Msa0905220:CDS |
| GATTATGGTTGGGACACTGC+TGG | 0.425726 | 6_2:+3223202 | Msa0905220:CDS |
| CTTTGTGCATGGACTAGGCT+AGG | 0.429458 | 6_2:-3223421 | None:intergenic |
| TGACGGAGGACTTGACTACT+TGG | 0.430522 | 6_2:+3223393 | Msa0905220:CDS |
| CGAATTGCTGGTGGACCTCT+TGG | 0.432168 | 6_2:+3223499 | Msa0905220:CDS |
| GGAGGAAGCTTTGATCCATT+GGG | 0.451132 | 6_2:+3223547 | Msa0905220:CDS |
| ACCCTGTCAACAACAACGCC+TGG | 0.453829 | 6_2:+3223697 | Msa0905220:CDS |
| TTCGCCACAAACTTTGTCCC+CGG | 0.454754 | 6_2:+3223723 | Msa0905220:CDS |
| GTGGAGGGTTACCGAATTGC+TGG | 0.455723 | 6_2:+3223487 | Msa0905220:CDS |
| TGTGGATGACCTCGAGTTCA+CGG | 0.456904 | 6_2:-3223258 | None:intergenic |
| GGATGCTTTGTGCATGGACT+AGG | 0.457276 | 6_2:-3223426 | None:intergenic |
| ATTTCCCGGTGATTATGGTT+GGG | 0.467005 | 6_2:+3223192 | Msa0905220:CDS |
| CAAGAGGTCCACCAGCAATT+CGG | 0.469861 | 6_2:-3223498 | None:intergenic |
| AATTTCCCGGTGATTATGGT+TGG | 0.472108 | 6_2:+3223191 | Msa0905220:CDS |
| ATTATGGTTGGGACACTGCT+GGG | 0.474978 | 6_2:+3223203 | Msa0905220:CDS |
| CTTCCCGGGGACAAAGTTTG+TGG | 0.482081 | 6_2:-3223727 | None:intergenic |
| CAGGCCATTGTAACCGGAAA+GGG | 0.483589 | 6_2:+3223664 | Msa0905220:CDS |
| AATTCACCAGTGAGGTAAGA+TGG | 0.486152 | 6_2:-3223172 | None:intergenic |
| AATGGATCAAAGCTTCCTCC+TGG | 0.501671 | 6_2:-3223544 | None:intergenic |
| TAGTAACTTTCTCACTTCCC+GGG | 0.517152 | 6_2:-3223741 | None:intergenic |
| AGAAGGAACGTTCTTCTTGG+TGG | 0.518277 | 6_2:-3223089 | None:intergenic |
| GATGGAGCTTCACCAGAGAA+TGG | 0.521781 | 6_2:-3223154 | None:intergenic |
| CCCTGTCAACAACAACGCCT+GGG | 0.527042 | 6_2:+3223698 | Msa0905220:CDS |
| TATCTTAATGGGAGCTGTGG+AGG | 0.528220 | 6_2:+3223471 | Msa0905220:CDS |
| GGGGACAAAGTTTGTGGCGA+AGG | 0.532625 | 6_2:-3223721 | None:intergenic |
| TGAAAGAACTAAAGAATGGT+AGG | 0.533963 | 6_2:+3223608 | Msa0905220:CDS |
| TCGCCACAAACTTTGTCCCC+GGG | 0.539051 | 6_2:+3223724 | Msa0905220:CDS |
| ATCTTAATGGGAGCTGTGGA+GGG | 0.548899 | 6_2:+3223472 | Msa0905220:CDS |
| AAAGTTTGTGGCGAAGGCCC+AGG | 0.551356 | 6_2:-3223715 | None:intergenic |
| AAGGTGAAAGAACTAAAGAA+TGG | 0.554381 | 6_2:+3223604 | Msa0905220:CDS |
| CCCAGGCGTTGTTGTTGACA+GGG | 0.554560 | 6_2:-3223698 | None:intergenic |
| GAAGCTCCATCTTACCTCAC+TGG | 0.557671 | 6_2:+3223166 | Msa0905220:CDS |
| TGGTCCCTTTCCGGTTACAA+TGG | 0.557705 | 6_2:-3223668 | None:intergenic |
| ACACGGTCTGGACCGTACCA+TGG | 0.561133 | 6_2:-3223118 | None:intergenic |
| AGTGTCCCAACCATAATCAC+CGG | 0.562637 | 6_2:-3223197 | None:intergenic |
| TTTGTGCATGGACTAGGCTA+GGG | 0.567865 | 6_2:-3223420 | None:intergenic |
| TCAACTCAGCAAAAGCCTCT+GGG | 0.575812 | 6_2:-3223582 | None:intergenic |
| TAGCAAGGATGCTTTGTGCA+TGG | 0.585942 | 6_2:-3223432 | None:intergenic |
| CCAGACCGTGTCAAGTACTT+GGG | 0.592167 | 6_2:+3223130 | Msa0905220:CDS |
| ATGGATCAAAGCTTCCTCCT+GGG | 0.595281 | 6_2:-3223543 | None:intergenic |
| GGGTCGTCAGAGAGGCCCAA+TGG | 0.597262 | 6_2:-3223562 | None:intergenic |
| AGTTATCTTAATGGGAGCTG+TGG | 0.599582 | 6_2:+3223468 | Msa0905220:CDS |
| TCAGGCCATTGTAACCGGAA+AGG | 0.602000 | 6_2:+3223663 | Msa0905220:CDS |
| GTTGTTGACAGGGTCTCTAG+TGG | 0.610044 | 6_2:-3223688 | None:intergenic |
| CTTGGACAGCCCAAATAGCA+AGG | 0.610157 | 6_2:-3223447 | None:intergenic |
| TGCTGGTGGACCTCTTGGTG+AGG | 0.612383 | 6_2:+3223504 | Msa0905220:CDS |
| CCTTCTGGAAGTCCATGGTA+CGG | 0.618330 | 6_2:+3223106 | Msa0905220:CDS |
| AAGCCTCTGGGTCGTCAGAG+AGG | 0.618903 | 6_2:-3223570 | None:intergenic |
| ACGTTCCTTCTGGAAGTCCA+TGG | 0.623865 | 6_2:+3223101 | Msa0905220:CDS |
| GTGTCCCAACCATAATCACC+GGG | 0.637236 | 6_2:-3223196 | None:intergenic |
| GGATCCCAAATCTTTAGTGA+CGG | 0.639909 | 6_2:+3223376 | Msa0905220:CDS |
| GAGGGTTACCGAATTGCTGG+TGG | 0.652555 | 6_2:+3223490 | Msa0905220:CDS |
| TCCCAAATCTTTAGTGACGG+AGG | 0.652925 | 6_2:+3223379 | Msa0905220:CDS |
| CCGTACCATGGACTTCCAGA+AGG | 0.658025 | 6_2:-3223106 | None:intergenic |
| GAGTCGACTACCTCACCAAG+AGG | 0.661710 | 6_2:-3223514 | None:intergenic |
| AGTAACTTTCTCACTTCCCG+GGG | 0.665390 | 6_2:-3223740 | None:intergenic |
| GACGGAGGACTTGACTACTT+GGG | 0.666450 | 6_2:+3223394 | Msa0905220:CDS |
| GGGCCTCTCTGACGACCCAG+AGG | 0.671120 | 6_2:+3223567 | Msa0905220:CDS |
| GTCGACTCACTTTACCCAGG+AGG | 0.703332 | 6_2:+3223529 | Msa0905220:CDS |
| ATGGACCCAAGTACTTGACA+CGG | 0.711188 | 6_2:-3223135 | None:intergenic |
| CACCGGGAAATTCACCAGTG+AGG | 0.714950 | 6_2:-3223180 | None:intergenic |
| GTAGTCGACTCACTTTACCC+AGG | 0.725854 | 6_2:+3223526 | Msa0905220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAGGTGAAAGAACTAAAGAA+TGG | + | chr6_2:3223604-3223623 | Msa0905220:CDS | 30.0% | |
| TGAAAGAACTAAAGAATGGT+AGG | + | chr6_2:3223608-3223627 | Msa0905220:CDS | 30.0% | |
| !! | GGTTTTTGGAAAATGTCTCT+GGG | - | chr6_2:3223240-3223259 | None:intergenic | 35.0% |
| !! | ACAAAGCATCCTTGCTATTT+GGG | + | chr6_2:3223438-3223457 | Msa0905220:CDS | 35.0% |
| GCTGTCCAAGTTATCTTAAT+GGG | + | chr6_2:3223460-3223479 | Msa0905220:CDS | 35.0% | |
| TTAGCTATGTTCTCGATGTT+TGG | + | chr6_2:3223631-3223650 | Msa0905220:CDS | 35.0% | |
| ! | GATGTTTGGATTTTTCGTTC+AGG | + | chr6_2:3223645-3223664 | Msa0905220:CDS | 35.0% |
| AATTCACCAGTGAGGTAAGA+TGG | - | chr6_2:3223175-3223194 | None:intergenic | 40.0% | |
| AATTTCCCGGTGATTATGGT+TGG | + | chr6_2:3223191-3223210 | Msa0905220:CDS | 40.0% | |
| ATTTCCCGGTGATTATGGTT+GGG | + | chr6_2:3223192-3223211 | Msa0905220:CDS | 40.0% | |
| !! | CGGTTTTTGGAAAATGTCTC+TGG | - | chr6_2:3223241-3223260 | None:intergenic | 40.0% |
| TGAAATTTGGCGAAGTTGTG+TGG | + | chr6_2:3223344-3223363 | Msa0905220:intron | 40.0% | |
| GGATCCCAAATCTTTAGTGA+CGG | + | chr6_2:3223376-3223395 | Msa0905220:CDS | 40.0% | |
| TCCTCCGTCACTAAAGATTT+GGG | - | chr6_2:3223383-3223402 | None:intergenic | 40.0% | |
| !! | CACAAAGCATCCTTGCTATT+TGG | + | chr6_2:3223437-3223456 | Msa0905220:CDS | 40.0% |
| GGCTGTCCAAGTTATCTTAA+TGG | + | chr6_2:3223459-3223478 | Msa0905220:CDS | 40.0% | |
| CAGCTCCCATTAAGATAACT+TGG | - | chr6_2:3223468-3223487 | None:intergenic | 40.0% | |
| AGTTATCTTAATGGGAGCTG+TGG | + | chr6_2:3223468-3223487 | Msa0905220:CDS | 40.0% | |
| TAGTAACTTTCTCACTTCCC+GGG | - | chr6_2:3223744-3223763 | None:intergenic | 40.0% | |
| CTAGTAACTTTCTCACTTCC+CGG | - | chr6_2:3223745-3223764 | None:intergenic | 40.0% | |
| AGAAGGAACGTTCTTCTTGG+TGG | - | chr6_2:3223092-3223111 | None:intergenic | 45.0% | |
| ACCAAGAAGAACGTTCCTTC+TGG | + | chr6_2:3223091-3223110 | Msa0905220:CDS | 45.0% | |
| TCCAGAAGGAACGTTCTTCT+TGG | - | chr6_2:3223095-3223114 | None:intergenic | 45.0% | |
| ATGGACCCAAGTACTTGACA+CGG | - | chr6_2:3223138-3223157 | None:intergenic | 45.0% | |
| AAGTACTTGGGTCCATTCTC+TGG | + | chr6_2:3223142-3223161 | Msa0905220:CDS | 45.0% | |
| TACCTCACTGGTGAATTTCC+CGG | + | chr6_2:3223178-3223197 | Msa0905220:CDS | 45.0% | |
| GGTGAATTTCCCGGTGATTA+TGG | + | chr6_2:3223187-3223206 | Msa0905220:CDS | 45.0% | |
| AGTGTCCCAACCATAATCAC+CGG | - | chr6_2:3223200-3223219 | None:intergenic | 45.0% | |
| ATTATGGTTGGGACACTGCT+GGG | + | chr6_2:3223203-3223222 | Msa0905220:CDS | 45.0% | |
| TTCCAAAAACCGTGAACTCG+AGG | + | chr6_2:3223249-3223268 | Msa0905220:CDS | 45.0% | |
| CACAGCAGATAGGCTATGTT+GGG | + | chr6_2:3223277-3223296 | Msa0905220:intron | 45.0% | |
| GCTCGCAATGGTGTGAAATT+TGG | + | chr6_2:3223331-3223350 | Msa0905220:intron | 45.0% | |
| TCCCAAATCTTTAGTGACGG+AGG | + | chr6_2:3223379-3223398 | Msa0905220:CDS | 45.0% | |
| GTCCTCCGTCACTAAAGATT+TGG | - | chr6_2:3223384-3223403 | None:intergenic | 45.0% | |
| !! | TTTGTGCATGGACTAGGCTA+GGG | - | chr6_2:3223423-3223442 | None:intergenic | 45.0% |
| TAGCAAGGATGCTTTGTGCA+TGG | - | chr6_2:3223435-3223454 | None:intergenic | 45.0% | |
| TATCTTAATGGGAGCTGTGG+AGG | + | chr6_2:3223471-3223490 | Msa0905220:CDS | 45.0% | |
| ATCTTAATGGGAGCTGTGGA+GGG | + | chr6_2:3223472-3223491 | Msa0905220:CDS | 45.0% | |
| ATGGATCAAAGCTTCCTCCT+GGG | - | chr6_2:3223546-3223565 | None:intergenic | 45.0% | |
| AATGGATCAAAGCTTCCTCC+TGG | - | chr6_2:3223547-3223566 | None:intergenic | 45.0% | |
| ! | AGGAGGAAGCTTTGATCCAT+TGG | + | chr6_2:3223546-3223565 | Msa0905220:CDS | 45.0% |
| ! | GGAGGAAGCTTTGATCCATT+GGG | + | chr6_2:3223547-3223566 | Msa0905220:CDS | 45.0% |
| TCAACTCAGCAAAAGCCTCT+GGG | - | chr6_2:3223585-3223604 | None:intergenic | 45.0% | |
| TTCAACTCAGCAAAAGCCTC+TGG | - | chr6_2:3223586-3223605 | None:intergenic | 45.0% | |
| !! | AGAGGCTTTTGCTGAGTTGA+AGG | + | chr6_2:3223585-3223604 | Msa0905220:CDS | 45.0% |
| TTCGTTCAGGCCATTGTAAC+CGG | + | chr6_2:3223658-3223677 | Msa0905220:CDS | 45.0% | |
| AGTAACTTTCTCACTTCCCG+GGG | - | chr6_2:3223743-3223762 | None:intergenic | 45.0% | |
| ! | ACGTTCCTTCTGGAAGTCCA+TGG | + | chr6_2:3223101-3223120 | Msa0905220:CDS | 50.0% |
| ! | CCTTCTGGAAGTCCATGGTA+CGG | + | chr6_2:3223106-3223125 | Msa0905220:CDS | 50.0% |
| TCCAGACCGTGTCAAGTACT+TGG | + | chr6_2:3223129-3223148 | Msa0905220:CDS | 50.0% | |
| CCAGACCGTGTCAAGTACTT+GGG | + | chr6_2:3223130-3223149 | Msa0905220:CDS | 50.0% | |
| GATGGAGCTTCACCAGAGAA+TGG | - | chr6_2:3223157-3223176 | None:intergenic | 50.0% | |
| GAAGCTCCATCTTACCTCAC+TGG | + | chr6_2:3223166-3223185 | Msa0905220:CDS | 50.0% | |
| GTGTCCCAACCATAATCACC+GGG | - | chr6_2:3223199-3223218 | None:intergenic | 50.0% | |
| GATTATGGTTGGGACACTGC+TGG | + | chr6_2:3223202-3223221 | Msa0905220:CDS | 50.0% | |
| ! | GACCTCGAGTTCACGGTTTT+TGG | - | chr6_2:3223254-3223273 | None:intergenic | 50.0% |
| TGTGGATGACCTCGAGTTCA+CGG | - | chr6_2:3223261-3223280 | None:intergenic | 50.0% | |
| CCAACATAGCCTATCTGCTG+TGG | - | chr6_2:3223279-3223298 | None:intergenic | 50.0% | |
| CCACAGCAGATAGGCTATGT+TGG | + | chr6_2:3223276-3223295 | Msa0905220:intron | 50.0% | |
| ATAGGCTATGTTGGGTGCCT+TGG | + | chr6_2:3223285-3223304 | Msa0905220:intron | 50.0% | |
| TAGGCTATGTTGGGTGCCTT+GGG | + | chr6_2:3223286-3223305 | Msa0905220:intron | 50.0% | |
| ATGTGTCTTCCCTGAGCTCT+TGG | + | chr6_2:3223309-3223328 | Msa0905220:intron | 50.0% | |
| TGGCGAAGTTGTGTGGTTCA+AGG | + | chr6_2:3223351-3223370 | Msa0905220:intron | 50.0% | |
| GAAGTTGTGTGGTTCAAGGC+AGG | + | chr6_2:3223355-3223374 | Msa0905220:intron | 50.0% | |
| TGACGGAGGACTTGACTACT+TGG | + | chr6_2:3223393-3223412 | Msa0905220:CDS | 50.0% | |
| GACGGAGGACTTGACTACTT+GGG | + | chr6_2:3223394-3223413 | Msa0905220:CDS | 50.0% | |
| !! | CTTTGTGCATGGACTAGGCT+AGG | - | chr6_2:3223424-3223443 | None:intergenic | 50.0% |
| GGATGCTTTGTGCATGGACT+AGG | - | chr6_2:3223429-3223448 | None:intergenic | 50.0% | |
| CTTGGACAGCCCAAATAGCA+AGG | - | chr6_2:3223450-3223469 | None:intergenic | 50.0% | |
| CAAGAGGTCCACCAGCAATT+CGG | - | chr6_2:3223501-3223520 | None:intergenic | 50.0% | |
| ! | GTAGTCGACTCACTTTACCC+AGG | + | chr6_2:3223526-3223545 | Msa0905220:CDS | 50.0% |
| TCAGGCCATTGTAACCGGAA+AGG | + | chr6_2:3223663-3223682 | Msa0905220:CDS | 50.0% | |
| CAGGCCATTGTAACCGGAAA+GGG | + | chr6_2:3223664-3223683 | Msa0905220:CDS | 50.0% | |
| TGGTCCCTTTCCGGTTACAA+TGG | - | chr6_2:3223671-3223690 | None:intergenic | 50.0% | |
| GTTGTTGACAGGGTCTCTAG+TGG | - | chr6_2:3223691-3223710 | None:intergenic | 50.0% | |
| TTCGCCACAAACTTTGTCCC+CGG | + | chr6_2:3223723-3223742 | Msa0905220:CDS | 50.0% | |
| CCGTACCATGGACTTCCAGA+AGG | - | chr6_2:3223109-3223128 | None:intergenic | 55.0% | |
| CCCAAGTACTTGACACGGTC+TGG | - | chr6_2:3223133-3223152 | None:intergenic | 55.0% | |
| CACCGGGAAATTCACCAGTG+AGG | - | chr6_2:3223183-3223202 | None:intergenic | 55.0% | |
| CGAGGTCATCCACAGCAGAT+AGG | + | chr6_2:3223267-3223286 | Msa0905220:intron | 55.0% | |
| CTCAGGGAAGACACATCCCA+AGG | - | chr6_2:3223305-3223324 | None:intergenic | 55.0% | |
| CATTGCGAGCCAAGAGCTCA+GGG | - | chr6_2:3223321-3223340 | None:intergenic | 55.0% | |
| GTGGAGGGTTACCGAATTGC+TGG | + | chr6_2:3223487-3223506 | Msa0905220:CDS | 55.0% | |
| GAGGGTTACCGAATTGCTGG+TGG | + | chr6_2:3223490-3223509 | Msa0905220:CDS | 55.0% | |
| ! | CGAATTGCTGGTGGACCTCT+TGG | + | chr6_2:3223499-3223518 | Msa0905220:CDS | 55.0% |
| GAGTCGACTACCTCACCAAG+AGG | - | chr6_2:3223517-3223536 | None:intergenic | 55.0% | |
| ! | GTCGACTCACTTTACCCAGG+AGG | + | chr6_2:3223529-3223548 | Msa0905220:CDS | 55.0% |
| GGTCTCTAGTGGTCCCTTTC+CGG | - | chr6_2:3223680-3223699 | None:intergenic | 55.0% | |
| ACCCTGTCAACAACAACGCC+TGG | + | chr6_2:3223697-3223716 | Msa0905220:CDS | 55.0% | |
| ! | CCCAGGCGTTGTTGTTGACA+GGG | - | chr6_2:3223701-3223720 | None:intergenic | 55.0% |
| CCCTGTCAACAACAACGCCT+GGG | + | chr6_2:3223698-3223717 | Msa0905220:CDS | 55.0% | |
| AAAGTTTGTGGCGAAGGCCC+AGG | - | chr6_2:3223718-3223737 | None:intergenic | 55.0% | |
| GGGGACAAAGTTTGTGGCGA+AGG | - | chr6_2:3223724-3223743 | None:intergenic | 55.0% | |
| TCGCCACAAACTTTGTCCCC+GGG | + | chr6_2:3223724-3223743 | Msa0905220:CDS | 55.0% | |
| CTTCCCGGGGACAAAGTTTG+TGG | - | chr6_2:3223730-3223749 | None:intergenic | 55.0% | |
| ACACGGTCTGGACCGTACCA+TGG | - | chr6_2:3223121-3223140 | None:intergenic | 60.0% | |
| CCATTGCGAGCCAAGAGCTC+AGG | - | chr6_2:3223322-3223341 | None:intergenic | 60.0% | |
| ! | CCTGAGCTCTTGGCTCGCAA+TGG | + | chr6_2:3223319-3223338 | Msa0905220:intron | 60.0% |
| ! | TGCTGGTGGACCTCTTGGTG+AGG | + | chr6_2:3223504-3223523 | Msa0905220:CDS | 60.0% |
| AAGCCTCTGGGTCGTCAGAG+AGG | - | chr6_2:3223573-3223592 | None:intergenic | 60.0% | |
| ! | GCCCAGGCGTTGTTGTTGAC+AGG | - | chr6_2:3223702-3223721 | None:intergenic | 60.0% |
| GGGTCGTCAGAGAGGCCCAA+TGG | - | chr6_2:3223565-3223584 | None:intergenic | 65.0% | |
| GGGCCTCTCTGACGACCCAG+AGG | + | chr6_2:3223567-3223586 | Msa0905220:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 3223076 | 3223795 | 3223076 | ID=Msa0905220;Name=Msa0905220 |
| chr6_2 | mRNA | 3223076 | 3223795 | 3223076 | ID=Msa0905220-mRNA-1;Parent=Msa0905220;Name=Msa0905220-mRNA-1;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|1|1|2|0|205 |
| chr6_2 | exon | 3223076 | 3223270 | 3223076 | ID=Msa0905220-mRNA-1:exon:999;Parent=Msa0905220-mRNA-1 |
| chr6_2 | exon | 3223373 | 3223795 | 3223373 | ID=Msa0905220-mRNA-1:exon:1000;Parent=Msa0905220-mRNA-1 |
| chr6_2 | CDS | 3223076 | 3223270 | 3223076 | ID=Msa0905220-mRNA-1:cds;Parent=Msa0905220-mRNA-1 |
| chr6_2 | CDS | 3223373 | 3223795 | 3223373 | ID=Msa0905220-mRNA-1:cds;Parent=Msa0905220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
