AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0497280


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0497280 MtrunA17_Chr3g0092361 93.182 44 3 0 1 44 1 44 2.55e-23 87.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 53 sgRNAs with CRISPR-Local

Find 141 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTGTTTGTGTTCTGTTTC+TGG 0.051760 3_4:-29649184 Msa0497280:CDS
CTTTGCTATTATTCATTAAT+TGG 0.197093 3_4:-29646805 Msa0497280:three_prime_UTR
ATTTATTTACAGGGGAATTA+TGG 0.224887 3_4:-29648842 Msa0497280:intron
TTTCAATTTCAAGGGCATTT+TGG 0.264806 3_4:+29647148 None:intergenic
AATGAGTGCTCTTAAGATAT+TGG 0.266272 3_4:-29646737 Msa0497280:three_prime_UTR
GGTCTTCCAATTGTTGTAAC+AGG 0.291635 3_4:+29647183 None:intergenic
TCTTAATGGTTTGCTGTGTT+TGG 0.321205 3_4:+29649277 None:intergenic
CATGACTTGTTTCAATTTCA+AGG 0.329598 3_4:+29647139 None:intergenic
GGGCTGATTGATTAATAAAC+TGG 0.334081 3_4:-29646828 Msa0497280:three_prime_UTR
ATGGTTTGCTGTGTTTGGTC+TGG 0.367551 3_4:+29649282 None:intergenic
TGTGTTCCTCCTGGCTATTA+TGG 0.372312 3_4:-29647223 Msa0497280:CDS
CAAATAGTATCTTCTACTAA+TGG 0.373139 3_4:-29646954 Msa0497280:three_prime_UTR
TGTGTCCCTGTTACAACAAT+TGG 0.425313 3_4:-29647189 Msa0497280:CDS
GCAAAAGATGCTGCTCAGTA+TGG 0.425821 3_4:-29648988 Msa0497280:CDS
CTTTGCTATTTGTCTTTCTC+CGG 0.427532 3_4:-29646782 Msa0497280:three_prime_UTR
CATCTTCTTGTGCATTGAGA+TGG 0.446525 3_4:+29647310 None:intergenic
ATCTTCTTGTGCATTGAGAT+GGG 0.464024 3_4:+29647311 None:intergenic
AATAGTATTAATCAAAGAAG+TGG 0.476821 3_4:-29647095 Msa0497280:three_prime_UTR
AAATGTCTCTGTGTTCCTCC+TGG 0.478257 3_4:-29647232 Msa0497280:CDS
AGGAGGAACACAGAGACATT+TGG 0.480481 3_4:+29647234 None:intergenic
GTAGAAGATACTATTTGAGT+TGG 0.485119 3_4:+29646960 None:intergenic
TCTACTAATGGATCATCATC+GGG 0.488483 3_4:-29646942 Msa0497280:three_prime_UTR
ATTAGATTGTGTTCCTCTCA+AGG 0.500817 3_4:+29647005 None:intergenic
ATGAGGTGGAGAAGAAGTGA+GGG 0.508441 3_4:+29649236 None:intergenic
TTCTACTAATGGATCATCAT+CGG 0.509516 3_4:-29646943 Msa0497280:three_prime_UTR
ATGACTTGTTTCAATTTCAA+GGG 0.510609 3_4:+29647140 None:intergenic
TTTGTTCAAGATATTGAATG+AGG 0.515430 3_4:+29649219 None:intergenic
ACTAACCTGAGTGGTGATCA+TGG 0.521483 3_4:+29649146 None:intergenic
AATGAGGTGGAGAAGAAGTG+AGG 0.536766 3_4:+29649235 None:intergenic
CAGCCCTCTTGTTTAAGAGA+GGG 0.538674 3_4:+29646845 None:intergenic
GTTCAAGATATTGAATGAGG+TGG 0.542180 3_4:+29649222 None:intergenic
GCTCTTAAGATATTGGATCA+AGG 0.558841 3_4:-29646730 Msa0497280:three_prime_UTR
AGCCCTCTTGTTTAAGAGAG+GGG 0.567486 3_4:+29646846 None:intergenic
GATTTGTTACCATAATAGCC+AGG 0.572427 3_4:+29647214 None:intergenic
CGGTAGCTTTGAAGACTCCC+AGG 0.578508 3_4:+29648818 None:intergenic
GTCTTCCAATTGTTGTAACA+GGG 0.578624 3_4:+29647184 None:intergenic
TACAGGGGAATTATGGACCT+GGG 0.587624 3_4:-29648835 Msa0497280:intron
TCAGCCCTCTTGTTTAAGAG+AGG 0.607045 3_4:+29646844 None:intergenic
TCTCAATGCACAAGAAGATG+TGG 0.608334 3_4:-29647307 Msa0497280:CDS
TTACAGGGGAATTATGGACC+TGG 0.609160 3_4:-29648836 Msa0497280:intron
AATATCTTGAACAAAAGCCA+TGG 0.609877 3_4:-29649211 Msa0497280:exon
CATTGCCATGATCACCACTC+AGG 0.609926 3_4:-29649151 Msa0497280:intron
AACAATTGGAAGACCAAGCG+TGG 0.618322 3_4:-29647175 Msa0497280:CDS
GAATCAAACGAAACCTTGAG+AGG 0.619990 3_4:-29647018 Msa0497280:three_prime_UTR
TAACCCCTCTCTTAAACAAG+AGG 0.624865 3_4:-29646849 Msa0497280:three_prime_UTR
AACACAAACAAGCTTAGCCA+TGG 0.629211 3_4:+29649194 None:intergenic
TGAGGTGGAGAAGAAGTGAG+GGG 0.642973 3_4:+29649237 None:intergenic
TGGTGATCATGGCAATGCTA+AGG 0.649208 3_4:+29649157 None:intergenic
AACCCCTCTCTTAAACAAGA+GGG 0.653095 3_4:-29646848 Msa0497280:three_prime_UTR
ATGGATATATGATTGACTCA+CGG 0.685005 3_4:+29648798 None:intergenic
AATTGGAAGACCAAGCGTGG+AGG 0.716723 3_4:-29647172 Msa0497280:CDS
TTGTTACCATAATAGCCAGG+AGG 0.723243 3_4:+29647217 None:intergenic
TAGGAGGAGACTAACCTGAG+TGG 0.729040 3_4:+29649137 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTCTTTTATTAAGATT+AGG + chr3_4:29646915-29646934 None:intergenic 10.0%
!!! TTAATTTTGTACATAAAATA+TGG - chr3_4:29647205-29647224 Msa0497280:CDS 10.0%
!! AAAATTATAATTAAATACAG+AGG - chr3_4:29647509-29647528 Msa0497280:intron 10.0%
!! TAAAAACTTAGTAAAAAAAA+GGG - chr3_4:29647855-29647874 Msa0497280:intron 10.0%
!! ACAAAAATTAACTTAAAAAT+AGG + chr3_4:29647990-29648009 None:intergenic 10.0%
!!! AATTTTTTCGATTTATTTAC+AGG - chr3_4:29647107-29647126 Msa0497280:three_prime_UTR 15.0%
!!! ATTTTTTCGATTTATTTACA+GGG - chr3_4:29647108-29647127 Msa0497280:three_prime_UTR 15.0%
!!! TTTTATGTACAAAATTAAGT+TGG + chr3_4:29647203-29647222 None:intergenic 15.0%
!!! ATGCTTTTTTTTTTCTTTTA+TGG - chr3_4:29647299-29647318 Msa0497280:CDS 15.0%
!!! GAATTTCATTTCTTTTTATA+TGG - chr3_4:29647589-29647608 Msa0497280:intron 15.0%
!! AAAAAAAGTCTATGTTAAAA+TGG + chr3_4:29647616-29647635 None:intergenic 15.0%
!!! AGTATCATTAGTTAATTTTT+AGG + chr3_4:29647743-29647762 None:intergenic 15.0%
!!! TTTTTTACTAAGTTTTTACT+AGG + chr3_4:29647853-29647872 None:intergenic 15.0%
!! GTAAAAACTTAGTAAAAAAA+AGG - chr3_4:29647854-29647873 Msa0497280:intron 15.0%
!! AAAAACTTAGTAAAAAAAAG+GGG - chr3_4:29647856-29647875 Msa0497280:intron 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG + chr3_4:29647959-29647978 None:intergenic 15.0%
!!! ATGAATTTTTATATTTTTGG+TGG + chr3_4:29648116-29648135 None:intergenic 15.0%
!!! AAAAAGTTGGTATATTTATA+GGG - chr3_4:29648332-29648351 Msa0497280:intron 15.0%
!!! ATATATCCATTTTAAATTAC+TGG + chr3_4:29648386-29648405 None:intergenic 15.0%
!! TTTAAATAAAGAATATTTCG+TGG - chr3_4:29648536-29648555 Msa0497280:intron 15.0%
!! TTAAATAAAGAATATTTCGT+GGG - chr3_4:29648537-29648556 Msa0497280:intron 15.0%
!! TGCTAAAAATAAATATTATG+TGG + chr3_4:29648898-29648917 None:intergenic 15.0%
!!! GAAATTTTGTATTAAGAAAA+TGG - chr3_4:29649263-29649282 Msa0497280:five_prime_UTR 15.0%
!! TTATTAAGATTAGGAAGATT+AGG + chr3_4:29646906-29646925 None:intergenic 20.0%
!!! TTTTTTCGATTTATTTACAG+GGG - chr3_4:29647109-29647128 Msa0497280:three_prime_UTR 20.0%
!! TTCAGAAACATATAATAAGT+GGG + chr3_4:29647411-29647430 None:intergenic 20.0%
!! TTTCAGAAACATATAATAAG+TGG + chr3_4:29647412-29647431 None:intergenic 20.0%
!!! ATCATTAGTTAATTTTTAGG+CGG + chr3_4:29647740-29647759 None:intergenic 20.0%
!! CACATAAACAAATATATAAG+TGG + chr3_4:29647784-29647803 None:intergenic 20.0%
!! CACTTATATATTTGTTTATG+TGG - chr3_4:29647782-29647801 Msa0497280:intron 20.0%
!!! TATGTGGCAATTTTATTTTT+TGG - chr3_4:29647798-29647817 Msa0497280:intron 20.0%
!!! GAAAAGTTGGTATATTTATT+GGG + chr3_4:29647899-29647918 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG + chr3_4:29647960-29647979 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG - chr3_4:29647963-29647982 Msa0497280:intron 20.0%
!!! ATATGAGTTTACTTTAAAAG+AGG - chr3_4:29648240-29648259 Msa0497280:intron 20.0%
!!! TATGAGTTTACTTTAAAAGA+GGG - chr3_4:29648241-29648260 Msa0497280:intron 20.0%
!!! CAAAAAGTTGGTATATTTAT+AGG - chr3_4:29648331-29648350 Msa0497280:intron 20.0%
!!! TTTTAGGGTTAATATGTTTT+TGG + chr3_4:29648359-29648378 None:intergenic 20.0%
!!! TAAATTACTGGTGATTTTTA+GGG + chr3_4:29648374-29648393 None:intergenic 20.0%
!!! TTAAATTACTGGTGATTTTT+AGG + chr3_4:29648375-29648394 None:intergenic 20.0%
!! AAATCACCAGTAATTTAAAA+TGG - chr3_4:29648377-29648396 Msa0497280:intron 20.0%
!! AATAGTATTAATCAAAGAAG+TGG - chr3_4:29648864-29648883 Msa0497280:intron 20.0%
!!! CTTTGCTATTATTCATTAAT+TGG - chr3_4:29649154-29649173 Msa0497280:CDS 20.0%
!!! ATTTTACAGTAAATTAACAC+CGG + chr3_4:29649199-29649218 None:intergenic 20.0%
!!! CTGATTTTAAGAGTTCTTAA+TGG + chr3_4:29646699-29646718 None:intergenic 25.0%
! TTTGTTCAAGATATTGAATG+AGG + chr3_4:29646743-29646762 None:intergenic 25.0%
!! AAATTTCCTATACATTTTGC+AGG - chr3_4:29646943-29646962 Msa0497280:three_prime_UTR 25.0%
!! TTTTGCAAAATGCCTATTAA+AGG + chr3_4:29647051-29647070 None:intergenic 25.0%
! ATTTATTTACAGGGGAATTA+TGG - chr3_4:29647117-29647136 Msa0497280:exon 25.0%
!!! ATTAAGTTGGTCTACAAAAA+TGG + chr3_4:29647190-29647209 None:intergenic 25.0%
! TCAGAAACATATAATAAGTG+GGG + chr3_4:29647410-29647429 None:intergenic 25.0%
! TAAAGAAATTTCCTCATGTA+TGG - chr3_4:29647482-29647501 Msa0497280:intron 25.0%
!! TAATTTTTGTACCATACATG+AGG + chr3_4:29647496-29647515 None:intergenic 25.0%
! AAATGAATGAATGTTAGAGA+CGG + chr3_4:29647551-29647570 None:intergenic 25.0%
!!! CGAAAAGTTGGTATATTTAT+TGG + chr3_4:29647900-29647919 None:intergenic 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + chr3_4:29648301-29648320 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + chr3_4:29648300-29648319 None:intergenic 25.0%
!!! TGAAGATGGTTAGTTTTAAT+GGG - chr3_4:29648272-29648291 Msa0497280:intron 25.0%
!!! ATGACTTGTTTCAATTTCAA+GGG + chr3_4:29648822-29648841 None:intergenic 25.0%
! CAAATAGTATCTTCTACTAA+TGG - chr3_4:29649005-29649024 Msa0497280:intron 25.0%
AATATCTTGAACAAAAGCCA+TGG - chr3_4:29646748-29646767 Msa0497280:three_prime_UTR 30.0%
!! GTTTTGTGTTGAGTTGTTTT+AGG + chr3_4:29646844-29646863 None:intergenic 30.0%
TGATACACATTCATGTAACA+TGG + chr3_4:29646866-29646885 None:intergenic 30.0%
AATTCTCAAAACAGAGAGAA+AGG + chr3_4:29647009-29647028 None:intergenic 30.0%
TCTTTCCTAGTTCCTTTAAT+AGG - chr3_4:29647036-29647055 Msa0497280:three_prime_UTR 30.0%
AAATGCCTATTAAAGGAACT+AGG + chr3_4:29647044-29647063 None:intergenic 30.0%
! ATGGATATATGATTGACTCA+CGG + chr3_4:29647164-29647183 None:intergenic 30.0%
CATGAGGAAATTTCTTTACA+TGG + chr3_4:29647480-29647499 None:intergenic 30.0%
AAATATTAAGCAATGCTCTG+AGG - chr3_4:29647664-29647683 Msa0497280:intron 30.0%
AATATTAAGCAATGCTCTGA+GGG - chr3_4:29647665-29647684 Msa0497280:intron 30.0%
!!! GTGGCAATTTTATTTTTTGG+TGG - chr3_4:29647801-29647820 Msa0497280:intron 30.0%
TTATAGGGACTAAAAGTTGA+AGG + chr3_4:29647944-29647963 None:intergenic 30.0%
! AAACTAACCATCTTCACTTT+TGG + chr3_4:29648268-29648287 None:intergenic 30.0%
!!! GTGAAGATGGTTAGTTTTAA+TGG - chr3_4:29648271-29648290 Msa0497280:intron 30.0%
TTAATGGGACTAAAAGTTGA+AGG - chr3_4:29648287-29648306 Msa0497280:intron 30.0%
GAGAGACTAAAACAAAAAGT+TGG - chr3_4:29648319-29648338 Msa0497280:intron 30.0%
GAGCATTCAAACAGAAATAT+AGG + chr3_4:29648417-29648436 None:intergenic 30.0%
!!! TTTCAATTTCAAGGGCATTT+TGG + chr3_4:29648814-29648833 None:intergenic 30.0%
!! CATGACTTGTTTCAATTTCA+AGG + chr3_4:29648823-29648842 None:intergenic 30.0%
GTAGAAGATACTATTTGAGT+TGG + chr3_4:29649002-29649021 None:intergenic 30.0%
! TTCTACTAATGGATCATCAT+CGG - chr3_4:29649016-29649035 Msa0497280:intron 30.0%
AATGAGTGCTCTTAAGATAT+TGG - chr3_4:29649222-29649241 Msa0497280:five_prime_UTR 30.0%
!! TCTTAATGGTTTGCTGTGTT+TGG + chr3_4:29646685-29646704 None:intergenic 35.0%
GTTCAAGATATTGAATGAGG+TGG + chr3_4:29646740-29646759 None:intergenic 35.0%
!!! TTGTGTTGAGTTGTTTTAGG+AGG + chr3_4:29646841-29646860 None:intergenic 35.0%
TAAAGGAACTAGGAAAGAAG+TGG + chr3_4:29647034-29647053 None:intergenic 35.0%
TGGTCTACAAAAATGGAGTA+TGG + chr3_4:29647183-29647202 None:intergenic 35.0%
CTAGGTACTTTGACGAATAT+GGG + chr3_4:29647835-29647854 None:intergenic 35.0%
ACTAGGTACTTTGACGAATA+TGG + chr3_4:29647836-29647855 None:intergenic 35.0%
TCTGAGAGAAATTGAATGAG+TGG - chr3_4:29648464-29648483 Msa0497280:intron 35.0%
TGAATGAGTGGAATCAAACA+TGG - chr3_4:29648476-29648495 Msa0497280:intron 35.0%
GTTAACACAATGCAGTCTAA+TGG - chr3_4:29648592-29648611 Msa0497280:intron 35.0%
ATCTTCTTGTGCATTGAGAT+GGG + chr3_4:29648651-29648670 None:intergenic 35.0%
! TTTTGACAGAAGAACATGCA+TGG + chr3_4:29648697-29648716 None:intergenic 35.0%
!! GATTTGTTACCATAATAGCC+AGG + chr3_4:29648748-29648767 None:intergenic 35.0%
GTCTTCCAATTGTTGTAACA+GGG + chr3_4:29648778-29648797 None:intergenic 35.0%
ATTAGATTGTGTTCCTCTCA+AGG + chr3_4:29648957-29648976 None:intergenic 35.0%
! TCTACTAATGGATCATCATC+GGG - chr3_4:29649017-29649036 Msa0497280:intron 35.0%
GGGCTGATTGATTAATAAAC+TGG - chr3_4:29649131-29649150 Msa0497280:intron 35.0%
!! CTTTGCTATTTGTCTTTCTC+CGG - chr3_4:29649177-29649196 Msa0497280:CDS 35.0%
GCTCTTAAGATATTGGATCA+AGG - chr3_4:29649229-29649248 Msa0497280:five_prime_UTR 35.0%
AACACAAACAAGCTTAGCCA+TGG + chr3_4:29646768-29646787 None:intergenic 40.0%
GCTTGTTTGTGTTCTGTTTC+TGG - chr3_4:29646775-29646794 Msa0497280:three_prime_UTR 40.0%
CCATAGCCTGCAAAATGTAT+AGG + chr3_4:29646952-29646971 None:intergenic 40.0%
! CCTATACATTTTGCAGGCTA+TGG - chr3_4:29646949-29646968 Msa0497280:three_prime_UTR 40.0%
! AGGCGGCTAATTTTCATTGA+TGG + chr3_4:29647723-29647742 None:intergenic 40.0%
CATCTTCTTGTGCATTGAGA+TGG + chr3_4:29648652-29648671 None:intergenic 40.0%
TCTCAATGCACAAGAAGATG+TGG - chr3_4:29648652-29648671 Msa0497280:intron 40.0%
TTGTTACCATAATAGCCAGG+AGG + chr3_4:29648745-29648764 None:intergenic 40.0%
TGTGTCCCTGTTACAACAAT+TGG - chr3_4:29648770-29648789 Msa0497280:CDS 40.0%
GGTCTTCCAATTGTTGTAAC+AGG + chr3_4:29648779-29648798 None:intergenic 40.0%
GAATCAAACGAAACCTTGAG+AGG - chr3_4:29648941-29648960 Msa0497280:intron 40.0%
TAACCCCTCTCTTAAACAAG+AGG - chr3_4:29649110-29649129 Msa0497280:intron 40.0%
AACCCCTCTCTTAAACAAGA+GGG - chr3_4:29649111-29649130 Msa0497280:intron 40.0%
ATGAGGTGGAGAAGAAGTGA+GGG + chr3_4:29646726-29646745 None:intergenic 45.0%
AATGAGGTGGAGAAGAAGTG+AGG + chr3_4:29646727-29646746 None:intergenic 45.0%
TGGTGATCATGGCAATGCTA+AGG + chr3_4:29646805-29646824 None:intergenic 45.0%
ACTAACCTGAGTGGTGATCA+TGG + chr3_4:29646816-29646835 None:intergenic 45.0%
GCAAAAGATGCTGCTCAGTA+TGG - chr3_4:29646971-29646990 Msa0497280:three_prime_UTR 45.0%
TTACAGGGGAATTATGGACC+TGG - chr3_4:29647123-29647142 Msa0497280:exon 45.0%
TACAGGGGAATTATGGACCT+GGG - chr3_4:29647124-29647143 Msa0497280:exon 45.0%
GAGGGACGAAAACGAAAAGT+TGG + chr3_4:29647912-29647931 None:intergenic 45.0%
AGAGGGACCAAAAGTGAAGA+TGG - chr3_4:29648258-29648277 Msa0497280:intron 45.0%
AGGAGGAACACAGAGACATT+TGG + chr3_4:29648728-29648747 None:intergenic 45.0%
AAATGTCTCTGTGTTCCTCC+TGG - chr3_4:29648727-29648746 Msa0497280:intron 45.0%
TGTGTTCCTCCTGGCTATTA+TGG - chr3_4:29648736-29648755 Msa0497280:intron 45.0%
AACAATTGGAAGACCAAGCG+TGG - chr3_4:29648784-29648803 Msa0497280:CDS 45.0%
! AGCCCTCTTGTTTAAGAGAG+GGG + chr3_4:29649116-29649135 None:intergenic 45.0%
! CAGCCCTCTTGTTTAAGAGA+GGG + chr3_4:29649117-29649136 None:intergenic 45.0%
! TCAGCCCTCTTGTTTAAGAG+AGG + chr3_4:29649118-29649137 None:intergenic 45.0%
!!! AAAAAATTCTAATTTTTTTT+GGG + chr3_4:29648062-29648081 None:intergenic 5.0%
!!! TAAAAAATTCTAATTTTTTT+TGG + chr3_4:29648063-29648082 None:intergenic 5.0%
!!! AATATGAATTTTTATATTTT+TGG + chr3_4:29648119-29648138 None:intergenic 5.0%
!!! AAAAATTCTAATTTTTTTTT+TGG - chr3_4:29648155-29648174 Msa0497280:intron 5.0%
!!! AAAATTCTAATTTTTTTTTT+GGG - chr3_4:29648156-29648175 Msa0497280:intron 5.0%
TGAGGTGGAGAAGAAGTGAG+GGG + chr3_4:29646725-29646744 None:intergenic 50.0%
CATTGCCATGATCACCACTC+AGG - chr3_4:29646808-29646827 Msa0497280:three_prime_UTR 50.0%
TAGGAGGAGACTAACCTGAG+TGG + chr3_4:29646825-29646844 None:intergenic 50.0%
AATTGGAAGACCAAGCGTGG+AGG - chr3_4:29648787-29648806 Msa0497280:CDS 50.0%
!! CGGTAGCTTTGAAGACTCCC+AGG + chr3_4:29647144-29647163 None:intergenic 55.0%
!! GCATTTTGGTCCTCCACGCT+TGG + chr3_4:29648800-29648819 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 29646678 29649303 29646678 ID=Msa0497280;Name=Msa0497280
chr3_4 mRNA 29646678 29649303 29646678 ID=Msa0497280-mRNA-1;Parent=Msa0497280;Name=Msa0497280-mRNA-1;_AED=0.21;_eAED=0.21;_QI=89|0.66|0.75|1|1|1|4|453|128
chr3_4 exon 29646678 29647337 29646678 ID=Msa0497280-mRNA-1:exon:6803;Parent=Msa0497280-mRNA-1
chr3_4 exon 29648769 29648852 29648769 ID=Msa0497280-mRNA-1:exon:6802;Parent=Msa0497280-mRNA-1
chr3_4 exon 29648984 29649016 29648984 ID=Msa0497280-mRNA-1:exon:6801;Parent=Msa0497280-mRNA-1
chr3_4 exon 29649152 29649303 29649152 ID=Msa0497280-mRNA-1:exon:6800;Parent=Msa0497280-mRNA-1
chr3_4 five_prime_UTR 29649215 29649303 29649215 ID=Msa0497280-mRNA-1:five_prime_utr;Parent=Msa0497280-mRNA-1
chr3_4 CDS 29649152 29649214 29649152 ID=Msa0497280-mRNA-1:cds;Parent=Msa0497280-mRNA-1
chr3_4 CDS 29648984 29649016 29648984 ID=Msa0497280-mRNA-1:cds;Parent=Msa0497280-mRNA-1
chr3_4 CDS 29648769 29648852 29648769 ID=Msa0497280-mRNA-1:cds;Parent=Msa0497280-mRNA-1
chr3_4 CDS 29647131 29647337 29647131 ID=Msa0497280-mRNA-1:cds;Parent=Msa0497280-mRNA-1
chr3_4 three_prime_UTR 29646678 29647130 29646678 ID=Msa0497280-mRNA-1:three_prime_utr;Parent=Msa0497280-mRNA-1
Gene Sequence

>Msa0497280

ATGGCTAAGCTTGTTTGTGTTCTGTTTCTGGCACTCCTTAGCATTGCCATGATCACCACTCAGGCTATGGCAAAAGATGCTGCTCAGTATGGCAGTGGGAATTATGGACCTGGGAGTCTTCAAAGCTACCGTGAGTCAATCATATATCCATACTCCATTTTTGTAGACCAACTTAATTTTAGTGCCCATCTCAATGCACAAGAAGATGTGGACAGACACAATATCACAAGCCATGCATGTTCTTCTGTCAAAAATGTTGTGCCAAATGTCTCTGTGTTCCTCCTGGCTATTATGGTAACAAATCTGTGTGTCCCTGTTACAACAATTGGAAGACCAAGCGTGGAGGACCAAAATGCCCTTGAAATTGAAACAAGTCATGATCATTAA

Protein sequence

>Msa0497280

MAKLVCVLFLALLSIAMITTQAMAKDAAQYGSGNYGPGSLQSYRESIIYPYSIFVDQLNFSAHLNAQEDVDRHNITSHACSSVKNVVPNVSVFLLAIMVTNLCVPVTTIGRPSVEDQNALEIETSHDH*