AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0402630


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0402630 MtrunA17_Chr3g0092361 93.182 44 3 0 1 44 1 44 2.55e-23 87.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 54 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTGTTTGTGTTCTGTTTC+TGG 0.051760 3_2:-30964040 Msa0402630:CDS
CTTTGCTATTATTCATTAAT+TGG 0.197093 3_2:-30961653 Msa0402630:three_prime_UTR
ATTTATTTACAGGGGAATTA+TGG 0.224887 3_2:-30963698 Msa0402630:intron
TTTCAATTTCAAGGGCATTT+TGG 0.264806 3_2:+30962006 None:intergenic
AATGAGTGCTCTTAAGATAT+TGG 0.266272 3_2:-30961585 Msa0402630:three_prime_UTR
GGTCTTCCAATTGTTGTAAC+AGG 0.291635 3_2:+30962041 None:intergenic
TATATAGTATCTTCTACTAA+TGG 0.317473 3_2:-30961802 Msa0402630:three_prime_UTR
TCTTAATGGTTTGCTGTGTT+TGG 0.321205 3_2:+30964133 None:intergenic
CATGACTTGTTTCAATTTCA+AGG 0.329598 3_2:+30961997 None:intergenic
GGGCTGATTGATTAATAAAC+TGG 0.334081 3_2:-30961676 Msa0402630:three_prime_UTR
ATGGTTTGCTGTGTTTGGTC+TGG 0.367551 3_2:+30964138 None:intergenic
TGTGTTCCTCCTGGCTATTA+TGG 0.372312 3_2:-30962081 Msa0402630:CDS
ATCATCAGACCAACTCAAAT+AGG 0.403112 3_2:-30961827 Msa0402630:three_prime_UTR
TGTGTCCCTGTTACAACAAT+TGG 0.425313 3_2:-30962047 Msa0402630:CDS
GCAAAAGATGCTGCTCAGTA+TGG 0.425821 3_2:-30963844 Msa0402630:CDS
CTTTGCTATTTGTCTTTCTC+CGG 0.427532 3_2:-30961630 Msa0402630:three_prime_UTR
CATCTTCTTGTGCATTGAGA+TGG 0.446525 3_2:+30962168 None:intergenic
ATCTTCTTGTGCATTGAGAT+GGG 0.464024 3_2:+30962169 None:intergenic
AATAGTATTAATCAAAGAAG+TGG 0.476821 3_2:-30961953 Msa0402630:three_prime_UTR
AAATGTCTCTGTGTTCCTCC+TGG 0.478257 3_2:-30962090 Msa0402630:CDS
AGGAGGAACACAGAGACATT+TGG 0.480481 3_2:+30962092 None:intergenic
TCTACTAATGGATCATCATC+GGG 0.488483 3_2:-30961790 Msa0402630:three_prime_UTR
ATTAGATTGTGTTCCTCTCA+AGG 0.500817 3_2:+30961863 None:intergenic
ATGAGGTGGAGAAGAAGTGA+GGG 0.508441 3_2:+30964092 None:intergenic
TTCTACTAATGGATCATCAT+CGG 0.509516 3_2:-30961791 Msa0402630:three_prime_UTR
ATGACTTGTTTCAATTTCAA+GGG 0.510609 3_2:+30961998 None:intergenic
TTTGTTCAAGATATTGAATG+AGG 0.515430 3_2:+30964075 None:intergenic
ACTAACCTGAGTGGTGATCA+TGG 0.521483 3_2:+30964002 None:intergenic
CTATATAAACCTATTTGAGT+TGG 0.532884 3_2:+30961818 None:intergenic
AATGAGGTGGAGAAGAAGTG+AGG 0.536766 3_2:+30964091 None:intergenic
CAGCCCTCTTGTTTAAGAGA+GGG 0.538674 3_2:+30961693 None:intergenic
GTTCAAGATATTGAATGAGG+TGG 0.542180 3_2:+30964078 None:intergenic
GCTCTTAAGATATTGGATCA+AGG 0.558841 3_2:-30961578 Msa0402630:three_prime_UTR
AGCCCTCTTGTTTAAGAGAG+GGG 0.567486 3_2:+30961694 None:intergenic
GATTTGTTACCATAATAGCC+AGG 0.572427 3_2:+30962072 None:intergenic
CGGTAGCTTTGAAGACTCCC+AGG 0.578508 3_2:+30963674 None:intergenic
GTCTTCCAATTGTTGTAACA+GGG 0.578624 3_2:+30962042 None:intergenic
TACAGGGGAATTATGGACCT+GGG 0.587624 3_2:-30963691 Msa0402630:intron
TCAGCCCTCTTGTTTAAGAG+AGG 0.607045 3_2:+30961692 None:intergenic
TCTCAATGCACAAGAAGATG+TGG 0.608334 3_2:-30962165 Msa0402630:CDS
TTACAGGGGAATTATGGACC+TGG 0.609160 3_2:-30963692 Msa0402630:intron
AATATCTTGAACAAAAGCCA+TGG 0.609877 3_2:-30964067 Msa0402630:exon
CATTGCCATGATCACCACTC+AGG 0.609926 3_2:-30964007 Msa0402630:intron
AACAATTGGAAGACCAAGCG+TGG 0.618322 3_2:-30962033 Msa0402630:CDS
GAATCAAACGAAACCTTGAG+AGG 0.619990 3_2:-30961876 Msa0402630:three_prime_UTR
TAACCCCTCTCTTAAACAAG+AGG 0.624865 3_2:-30961697 Msa0402630:three_prime_UTR
AACACAAACAAGCTTAGCCA+TGG 0.629211 3_2:+30964050 None:intergenic
TGAGGTGGAGAAGAAGTGAG+GGG 0.642973 3_2:+30964093 None:intergenic
TGGTGATCATGGCAATGCTA+AGG 0.649208 3_2:+30964013 None:intergenic
AACCCCTCTCTTAAACAAGA+GGG 0.653095 3_2:-30961696 Msa0402630:three_prime_UTR
ATGGATATATGATTGACTCA+CGG 0.685005 3_2:+30963654 None:intergenic
AATTGGAAGACCAAGCGTGG+AGG 0.716723 3_2:-30962030 Msa0402630:CDS
TTGTTACCATAATAGCCAGG+AGG 0.723243 3_2:+30962075 None:intergenic
TAGGAGGAGACTAACCTGAG+TGG 0.729040 3_2:+30963993 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTCTTTTATTAAGATT+AGG + chr3_2:30961763-30961782 None:intergenic 10.0%
!!! TTAATTTTGTACATAAAATA+TGG - chr3_2:30962053-30962072 Msa0402630:CDS 10.0%
!! AAAATTATAATTAAATACAG+AGG - chr3_2:30962357-30962376 Msa0402630:intron 10.0%
!! TAAAAACTTAGTAAAAAAAA+GGG - chr3_2:30962703-30962722 Msa0402630:intron 10.0%
!! ACAAAAATTAACTTAAAAAT+AGG + chr3_2:30962838-30962857 None:intergenic 10.0%
!!! AATTTTTTCGATTTATTTAC+AGG - chr3_2:30961955-30961974 Msa0402630:three_prime_UTR 15.0%
!!! ATTTTTTCGATTTATTTACA+GGG - chr3_2:30961956-30961975 Msa0402630:three_prime_UTR 15.0%
!!! TTTTATGTACAAAATTAAGT+TGG + chr3_2:30962051-30962070 None:intergenic 15.0%
!!! ATGCTTTTTTTTTTCTTTTA+TGG - chr3_2:30962147-30962166 Msa0402630:CDS 15.0%
!!! GAATTTCATTTCTTTTTATA+TGG - chr3_2:30962437-30962456 Msa0402630:intron 15.0%
!! AAAAAAAGTCTATGTTAAAA+TGG + chr3_2:30962464-30962483 None:intergenic 15.0%
!!! AGTATCATTAGTTAATTTTT+AGG + chr3_2:30962591-30962610 None:intergenic 15.0%
!!! TTTTTTACTAAGTTTTTACT+AGG + chr3_2:30962701-30962720 None:intergenic 15.0%
!! GTAAAAACTTAGTAAAAAAA+AGG - chr3_2:30962702-30962721 Msa0402630:intron 15.0%
!! AAAAACTTAGTAAAAAAAAG+GGG - chr3_2:30962704-30962723 Msa0402630:intron 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG + chr3_2:30962807-30962826 None:intergenic 15.0%
!!! ATGAATTTTTATATTTTTGG+TGG + chr3_2:30962964-30962983 None:intergenic 15.0%
!!! AAAAAGTTGGTATATTTATA+GGG - chr3_2:30963180-30963199 Msa0402630:intron 15.0%
!!! ATATATCCATTTTAAATTAC+TGG + chr3_2:30963234-30963253 None:intergenic 15.0%
!! TTTAAATAAAGAATATTTCG+TGG - chr3_2:30963384-30963403 Msa0402630:intron 15.0%
!! TTAAATAAAGAATATTTCGT+GGG - chr3_2:30963385-30963404 Msa0402630:intron 15.0%
!! TGCTAAAAATAAATATTATG+TGG + chr3_2:30963744-30963763 None:intergenic 15.0%
!!! GAAATTTTGTATTAAGAAAA+TGG - chr3_2:30964119-30964138 Msa0402630:five_prime_UTR 15.0%
!! TTATTAAGATTAGGAAGATT+AGG + chr3_2:30961754-30961773 None:intergenic 20.0%
!!! TTTTTTCGATTTATTTACAG+GGG - chr3_2:30961957-30961976 Msa0402630:three_prime_UTR 20.0%
!! TTCAGAAACATATAATAAGT+GGG + chr3_2:30962259-30962278 None:intergenic 20.0%
!! TTTCAGAAACATATAATAAG+TGG + chr3_2:30962260-30962279 None:intergenic 20.0%
!!! ATCATTAGTTAATTTTTAGG+CGG + chr3_2:30962588-30962607 None:intergenic 20.0%
!! CACATAAACAAATATATAAG+TGG + chr3_2:30962632-30962651 None:intergenic 20.0%
!! CACTTATATATTTGTTTATG+TGG - chr3_2:30962630-30962649 Msa0402630:intron 20.0%
!!! TATGTGGCAATTTTATTTTT+TGG - chr3_2:30962646-30962665 Msa0402630:intron 20.0%
!!! GAAAAGTTGGTATATTTATT+GGG + chr3_2:30962747-30962766 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG + chr3_2:30962808-30962827 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG - chr3_2:30962811-30962830 Msa0402630:intron 20.0%
!!! ATATGAGTTTACTTTAAAAG+AGG - chr3_2:30963088-30963107 Msa0402630:intron 20.0%
!!! TATGAGTTTACTTTAAAAGA+GGG - chr3_2:30963089-30963108 Msa0402630:intron 20.0%
!!! CAAAAAGTTGGTATATTTAT+AGG - chr3_2:30963179-30963198 Msa0402630:intron 20.0%
!!! TTTTAGGGTTAATATGTTTT+TGG + chr3_2:30963207-30963226 None:intergenic 20.0%
!!! TAAATTACTGGTGATTTTTA+GGG + chr3_2:30963222-30963241 None:intergenic 20.0%
!!! TTAAATTACTGGTGATTTTT+AGG + chr3_2:30963223-30963242 None:intergenic 20.0%
!! AAATCACCAGTAATTTAAAA+TGG - chr3_2:30963225-30963244 Msa0402630:intron 20.0%
!! AATAGTATTAATCAAAGAAG+TGG - chr3_2:30963710-30963729 Msa0402630:intron 20.0%
!! TATATAGTATCTTCTACTAA+TGG - chr3_2:30963861-30963880 Msa0402630:intron 20.0%
!!! CTTTGCTATTATTCATTAAT+TGG - chr3_2:30964010-30964029 Msa0402630:CDS 20.0%
!!! ATTTTACAGTAAATTAACAC+CGG + chr3_2:30964055-30964074 None:intergenic 20.0%
!!! CTGATTTTAAGAGTTCTTAA+TGG + chr3_2:30961547-30961566 None:intergenic 25.0%
! TTTGTTCAAGATATTGAATG+AGG + chr3_2:30961591-30961610 None:intergenic 25.0%
!! AAATTTCCTATTCATTTTGC+AGG - chr3_2:30961791-30961810 Msa0402630:three_prime_UTR 25.0%
!! TTTTGCAAAATGCCTATTAA+AGG + chr3_2:30961899-30961918 None:intergenic 25.0%
! ATTTATTTACAGGGGAATTA+TGG - chr3_2:30961965-30961984 Msa0402630:three_prime_UTR 25.0%
!!! ATTAAGTTGGTCTACAAAAA+TGG + chr3_2:30962038-30962057 None:intergenic 25.0%
! TCAGAAACATATAATAAGTG+GGG + chr3_2:30962258-30962277 None:intergenic 25.0%
! CATGAGGAAATTTCTTTAAA+TGG + chr3_2:30962328-30962347 None:intergenic 25.0%
! TAAAGAAATTTCCTCATGTA+TGG - chr3_2:30962330-30962349 Msa0402630:intron 25.0%
!! TAATTTTTGTACCATACATG+AGG + chr3_2:30962344-30962363 None:intergenic 25.0%
! AAATGAATGAATGTTAGAGA+CGG + chr3_2:30962399-30962418 None:intergenic 25.0%
!!! CGAAAAGTTGGTATATTTAT+TGG + chr3_2:30962748-30962767 None:intergenic 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + chr3_2:30963149-30963168 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + chr3_2:30963148-30963167 None:intergenic 25.0%
!!! TGAAGATGGTTAGTTTTAAT+GGG - chr3_2:30963120-30963139 Msa0402630:intron 25.0%
!!! ATGACTTGTTTCAATTTCAA+GGG + chr3_2:30963668-30963687 None:intergenic 25.0%
! CTATATAAACCTATTTGAGT+TGG + chr3_2:30963848-30963867 None:intergenic 25.0%
AATATCTTGAACAAAAGCCA+TGG - chr3_2:30961596-30961615 Msa0402630:three_prime_UTR 30.0%
!! GTTTTGTGTTGAGTTGTTTT+AGG + chr3_2:30961692-30961711 None:intergenic 30.0%
TGATACACATTCATGTAACA+TGG + chr3_2:30961714-30961733 None:intergenic 30.0%
AATTCTCAAAACAGAGAGAA+AGG + chr3_2:30961857-30961876 None:intergenic 30.0%
TCTTTCCTAGTTCCTTTAAT+AGG - chr3_2:30961884-30961903 Msa0402630:three_prime_UTR 30.0%
AAATGCCTATTAAAGGAACT+AGG + chr3_2:30961892-30961911 None:intergenic 30.0%
! ATGGATATATGATTGACTCA+CGG + chr3_2:30962012-30962031 None:intergenic 30.0%
AAATATTAAGCAATGCTCTG+AGG - chr3_2:30962512-30962531 Msa0402630:intron 30.0%
AATATTAAGCAATGCTCTGA+GGG - chr3_2:30962513-30962532 Msa0402630:intron 30.0%
!!! GTGGCAATTTTATTTTTTGG+TGG - chr3_2:30962649-30962668 Msa0402630:intron 30.0%
TTATAGGGACTAAAAGTTGA+AGG + chr3_2:30962792-30962811 None:intergenic 30.0%
! AAACTAACCATCTTCACTTT+TGG + chr3_2:30963116-30963135 None:intergenic 30.0%
!!! GTGAAGATGGTTAGTTTTAA+TGG - chr3_2:30963119-30963138 Msa0402630:intron 30.0%
TTAATGGGACTAAAAGTTGA+AGG - chr3_2:30963135-30963154 Msa0402630:intron 30.0%
GAGAGACTAAAACAAAAAGT+TGG - chr3_2:30963167-30963186 Msa0402630:intron 30.0%
GAGCATTCAAACAGAAATAT+AGG + chr3_2:30963265-30963284 None:intergenic 30.0%
!!! TTTCAATTTCAAGGGCATTT+TGG + chr3_2:30963660-30963679 None:intergenic 30.0%
!! CATGACTTGTTTCAATTTCA+AGG + chr3_2:30963669-30963688 None:intergenic 30.0%
! TTCTACTAATGGATCATCAT+CGG - chr3_2:30963872-30963891 Msa0402630:intron 30.0%
AATGAGTGCTCTTAAGATAT+TGG - chr3_2:30964078-30964097 Msa0402630:five_prime_UTR 30.0%
!! TCTTAATGGTTTGCTGTGTT+TGG + chr3_2:30961533-30961552 None:intergenic 35.0%
GTTCAAGATATTGAATGAGG+TGG + chr3_2:30961588-30961607 None:intergenic 35.0%
!!! TTGTGTTGAGTTGTTTTAGG+AGG + chr3_2:30961689-30961708 None:intergenic 35.0%
TAAAGGAACTAGGAAAGAAG+TGG + chr3_2:30961882-30961901 None:intergenic 35.0%
TGGTCTACAAAAATGGAGTA+TGG + chr3_2:30962031-30962050 None:intergenic 35.0%
CTAGGTACTTTGACGAATAT+GGG + chr3_2:30962683-30962702 None:intergenic 35.0%
ACTAGGTACTTTGACGAATA+TGG + chr3_2:30962684-30962703 None:intergenic 35.0%
TCTGAGTGAAATTGAATGAG+TGG - chr3_2:30963312-30963331 Msa0402630:intron 35.0%
TGAATGAGTGGAATCAAACA+TGG - chr3_2:30963324-30963343 Msa0402630:intron 35.0%
GTTAACACAATGCAGTCTAA+TGG - chr3_2:30963438-30963457 Msa0402630:intron 35.0%
ATCTTCTTGTGCATTGAGAT+GGG + chr3_2:30963497-30963516 None:intergenic 35.0%
! TTTTGACAGAAGAACATGCA+TGG + chr3_2:30963543-30963562 None:intergenic 35.0%
!! GATTTGTTACCATAATAGCC+AGG + chr3_2:30963594-30963613 None:intergenic 35.0%
GTCTTCCAATTGTTGTAACA+GGG + chr3_2:30963624-30963643 None:intergenic 35.0%
ATTAGATTGTGTTCCTCTCA+AGG + chr3_2:30963803-30963822 None:intergenic 35.0%
ATCATCAGACCAACTCAAAT+AGG - chr3_2:30963836-30963855 Msa0402630:intron 35.0%
! TCTACTAATGGATCATCATC+GGG - chr3_2:30963873-30963892 Msa0402630:intron 35.0%
GGGCTGATTGATTAATAAAC+TGG - chr3_2:30963987-30964006 Msa0402630:intron 35.0%
!! CTTTGCTATTTGTCTTTCTC+CGG - chr3_2:30964033-30964052 Msa0402630:CDS 35.0%
GCTCTTAAGATATTGGATCA+AGG - chr3_2:30964085-30964104 Msa0402630:five_prime_UTR 35.0%
AACACAAACAAGCTTAGCCA+TGG + chr3_2:30961616-30961635 None:intergenic 40.0%
GCTTGTTTGTGTTCTGTTTC+TGG - chr3_2:30961623-30961642 Msa0402630:three_prime_UTR 40.0%
CCATAGCCTGCAAAATGAAT+AGG + chr3_2:30961800-30961819 None:intergenic 40.0%
! CCTATTCATTTTGCAGGCTA+TGG - chr3_2:30961797-30961816 Msa0402630:three_prime_UTR 40.0%
! AGGCGGCTAATTTTCATTGA+TGG + chr3_2:30962571-30962590 None:intergenic 40.0%
CATCTTCTTGTGCATTGAGA+TGG + chr3_2:30963498-30963517 None:intergenic 40.0%
TCTCAATGCACAAGAAGATG+TGG - chr3_2:30963498-30963517 Msa0402630:intron 40.0%
TTGTTACCATAATAGCCAGG+AGG + chr3_2:30963591-30963610 None:intergenic 40.0%
TGTGTCCCTGTTACAACAAT+TGG - chr3_2:30963616-30963635 Msa0402630:intron 40.0%
GGTCTTCCAATTGTTGTAAC+AGG + chr3_2:30963625-30963644 None:intergenic 40.0%
GAATCAAACGAAACCTTGAG+AGG - chr3_2:30963787-30963806 Msa0402630:intron 40.0%
TAACCCCTCTCTTAAACAAG+AGG - chr3_2:30963966-30963985 Msa0402630:intron 40.0%
AACCCCTCTCTTAAACAAGA+GGG - chr3_2:30963967-30963986 Msa0402630:intron 40.0%
ATGAGGTGGAGAAGAAGTGA+GGG + chr3_2:30961574-30961593 None:intergenic 45.0%
AATGAGGTGGAGAAGAAGTG+AGG + chr3_2:30961575-30961594 None:intergenic 45.0%
TGGTGATCATGGCAATGCTA+AGG + chr3_2:30961653-30961672 None:intergenic 45.0%
ACTAACCTGAGTGGTGATCA+TGG + chr3_2:30961664-30961683 None:intergenic 45.0%
GCAAAAGATGCTGCTCAGTA+TGG - chr3_2:30961819-30961838 Msa0402630:three_prime_UTR 45.0%
TTACAGGGGAATTATGGACC+TGG - chr3_2:30961971-30961990 Msa0402630:exon 45.0%
TACAGGGGAATTATGGACCT+GGG - chr3_2:30961972-30961991 Msa0402630:exon 45.0%
GAGGGACGAAAACGAAAAGT+TGG + chr3_2:30962760-30962779 None:intergenic 45.0%
AGAGGGACCAAAAGTGAAGA+TGG - chr3_2:30963106-30963125 Msa0402630:intron 45.0%
AGGAGGAACACAGAGACATT+TGG + chr3_2:30963574-30963593 None:intergenic 45.0%
AAATGTCTCTGTGTTCCTCC+TGG - chr3_2:30963573-30963592 Msa0402630:intron 45.0%
TGTGTTCCTCCTGGCTATTA+TGG - chr3_2:30963582-30963601 Msa0402630:intron 45.0%
AACAATTGGAAGACCAAGCG+TGG - chr3_2:30963630-30963649 Msa0402630:CDS 45.0%
! AGCCCTCTTGTTTAAGAGAG+GGG + chr3_2:30963972-30963991 None:intergenic 45.0%
! CAGCCCTCTTGTTTAAGAGA+GGG + chr3_2:30963973-30963992 None:intergenic 45.0%
! TCAGCCCTCTTGTTTAAGAG+AGG + chr3_2:30963974-30963993 None:intergenic 45.0%
!!! AAAAAATTCTAATTTTTTTT+GGG + chr3_2:30963003-30963022 None:intergenic 5.0%
!!! TAAAAAATTCTAATTTTTTT+TGG + chr3_2:30963002-30963021 None:intergenic 5.0%
!!! AATATGAATTTTTATATTTT+TGG + chr3_2:30962967-30962986 None:intergenic 5.0%
!!! AAAAAATTCTAATTTTTTTT+TGG - chr3_2:30963003-30963022 Msa0402630:intron 5.0%
!!! AAAAATTCTAATTTTTTTTT+GGG - chr3_2:30963004-30963023 Msa0402630:intron 5.0%
TGAGGTGGAGAAGAAGTGAG+GGG + chr3_2:30961573-30961592 None:intergenic 50.0%
CATTGCCATGATCACCACTC+AGG - chr3_2:30961656-30961675 Msa0402630:three_prime_UTR 50.0%
TAGGAGGAGACTAACCTGAG+TGG + chr3_2:30961673-30961692 None:intergenic 50.0%
AATTGGAAGACCAAGCGTGG+AGG - chr3_2:30963633-30963652 Msa0402630:CDS 50.0%
!! CGGTAGCTTTGAAGACTCCC+AGG + chr3_2:30961992-30962011 None:intergenic 55.0%
!! GCATTTTGGTCCTCCACGCT+TGG + chr3_2:30963646-30963665 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 30961526 30964159 30961526 ID=Msa0402630;Name=Msa0402630
chr3_2 mRNA 30961526 30964159 30961526 ID=Msa0402630-mRNA-1;Parent=Msa0402630;Name=Msa0402630-mRNA-1;_AED=0.21;_eAED=0.21;_QI=89|0.66|0.75|1|1|1|4|463|128
chr3_2 exon 30961526 30962195 30961526 ID=Msa0402630-mRNA-1:exon:6197;Parent=Msa0402630-mRNA-1
chr3_2 exon 30963625 30963708 30963625 ID=Msa0402630-mRNA-1:exon:6196;Parent=Msa0402630-mRNA-1
chr3_2 exon 30963840 30963872 30963840 ID=Msa0402630-mRNA-1:exon:6195;Parent=Msa0402630-mRNA-1
chr3_2 exon 30964008 30964159 30964008 ID=Msa0402630-mRNA-1:exon:6194;Parent=Msa0402630-mRNA-1
chr3_2 five_prime_UTR 30964071 30964159 30964071 ID=Msa0402630-mRNA-1:five_prime_utr;Parent=Msa0402630-mRNA-1
chr3_2 CDS 30964008 30964070 30964008 ID=Msa0402630-mRNA-1:cds;Parent=Msa0402630-mRNA-1
chr3_2 CDS 30963840 30963872 30963840 ID=Msa0402630-mRNA-1:cds;Parent=Msa0402630-mRNA-1
chr3_2 CDS 30963625 30963708 30963625 ID=Msa0402630-mRNA-1:cds;Parent=Msa0402630-mRNA-1
chr3_2 CDS 30961989 30962195 30961989 ID=Msa0402630-mRNA-1:cds;Parent=Msa0402630-mRNA-1
chr3_2 three_prime_UTR 30961526 30961988 30961526 ID=Msa0402630-mRNA-1:three_prime_utr;Parent=Msa0402630-mRNA-1
Gene Sequence

>Msa0402630

ATGGCTAAGCTTGTTTGTGTTCTGTTTCTGGCACTCCTTAGCATTGCCATGATCACCACTCAGGCTATGGCAAAAGATGCTGCTCAGTATGGCAGTGGGAATTATGGACCTGGGAGTCTTCAAAGCTACCGTGAGTCAATCATATATCCATACTCCATTTTTGTAGACCAACTTAATTTTAGTGCCCATCTCAATGCACAAGAAGATGTGGACAGACACAATATCACAAGCCATGCATGTTCTTCTGTCAAAAATGTTGTGCCAAATGTCTCTGTGTTCCTCCTGGCTATTATGGTAACAAATCTGTGTGTCCCTGTTACAACAATTGGAAGACCAAGCGTGGAGGACCAAAATGCCCTTGAAATTGAAACAAGTCATGATCATTAA

Protein sequence

>Msa0402630

MAKLVCVLFLALLSIAMITTQAMAKDAAQYGSGNYGPGSLQSYRESIIYPYSIFVDQLNFSAHLNAQEDVDRHNITSHACSSVKNVVPNVSVFLLAIMVTNLCVPVTTIGRPSVEDQNALEIETSHDH*