AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1070020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1070020 MtrunA17_Chr7g0252281 94.405 983 54 1 1 983 1 982 0.0 1910
Msa1070020 MtrunA17_Chr6g0461901 48.331 629 285 12 3 595 1 625 3.89e-167 514
Msa1070020 MtrunA17_Chr2g0327571 25.664 226 142 6 89 297 81 297 8.69e-14 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1070020 AT5G13950.3 44.598 435 222 6 3 428 1 425 3.42e-108 358
Msa1070020 AT5G13950.3 27.586 377 209 15 650 982 597 953 6.61e-21 99.8
Msa1070020 AT5G13950.1 44.988 429 214 6 3 428 1 410 6.68e-108 357
Msa1070020 AT5G13950.1 27.586 377 209 15 650 982 582 938 6.14e-21 99.8
Msa1070020 AT5G13950.2 44.988 429 214 6 3 428 1 410 6.68e-108 357
Msa1070020 AT5G13950.2 27.586 377 209 15 650 982 582 938 6.14e-21 99.8
Msa1070020 AT5G13950.4 44.988 429 214 6 3 428 1 410 6.68e-108 357
Msa1070020 AT5G13950.4 27.586 377 209 15 650 982 582 938 6.14e-21 99.8
Msa1070020 AT3G45830.1 33.758 157 96 3 89 240 80 233 4.32e-17 87.4
Msa1070020 AT1G02290.1 33.871 124 78 2 85 205 31 153 1.39e-15 80.9

Find 303 sgRNAs with CRISPR-Local

Find 575 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATAATTAAATAAATATT+TGG 0.172233 7_2:+65891895 None:intergenic
TTGGAAACCCTTTCTTAAAA+TGG 0.183676 7_2:-65889683 Msa1070020:intron
AGGACTAAACGAAAGAATTT+TGG 0.201867 7_2:-65890149 Msa1070020:CDS
CAAAATTAACTATGTTAATT+AGG 0.209520 7_2:+65884581 None:intergenic
AACGAGTGTGAAGGGCAATT+TGG 0.214860 7_2:+65891620 None:intergenic
GTGTAGTTTGCCTCCTTTCT+TGG 0.223658 7_2:+65887307 None:intergenic
CTCTTCAGACCAGCAAATTC+AGG 0.228547 7_2:-65884975 Msa1070020:CDS
CAGGGGTGCTTCACTTTGTT+CGG 0.235888 7_2:-65888851 Msa1070020:CDS
GTTGTCCAGGAATTACTTTC+TGG 0.238235 7_2:-65889720 Msa1070020:CDS
GCTGAAGCCATCATATTTCT+TGG 0.241352 7_2:+65887359 None:intergenic
TAGTACTCTTAACTGTGTTT+TGG 0.255011 7_2:-65886765 Msa1070020:CDS
CCTTAAAATGACTATAAAAT+TGG 0.257108 7_2:+65885230 None:intergenic
AAGGGTTACCTGAACGTAAT+TGG 0.266046 7_2:+65884852 None:intergenic
CGCTGTTGTGATAAGAATTA+TGG 0.276488 7_2:+65886142 None:intergenic
TGCCCTTCACACTCGTTCTT+AGG 0.276698 7_2:-65891614 Msa1070020:five_prime_UTR
ACGAGTGTGAAGGGCAATTT+GGG 0.286152 7_2:+65891621 None:intergenic
CTTGTCCCATTGAGGAAATT+TGG 0.294813 7_2:+65888080 None:intergenic
CATGCTCCTCCTCCTGGGCC+TGG 0.296666 7_2:+65886235 None:intergenic
ATGTCAAACCTCAGAATATT+TGG 0.297027 7_2:+65888576 None:intergenic
CCACCCCTTTCATATAGATT+TGG 0.298364 7_2:-65885698 Msa1070020:CDS
AAGAGCTGGGTTAAATTTCC+AGG 0.308776 7_2:-65885281 Msa1070020:CDS
TCTTGGTGTAAATTAGATTC+TGG 0.308815 7_2:+65885439 None:intergenic
TTATGGAGGGACGGGTTCTC+TGG 0.322298 7_2:+65886159 None:intergenic
CAAAGAAGAAAGCAATTAAA+TGG 0.322965 7_2:-65890209 Msa1070020:CDS
TGCAGCTAGTGGATCTTGCC+TGG 0.327302 7_2:+65885093 None:intergenic
AATCTCACATTTCTGTTGAA+TGG 0.330598 7_2:-65890097 Msa1070020:CDS
TCAACAGCCATTAGCATATA+AGG 0.331673 7_2:+65890233 None:intergenic
TTATCATTTGGCAGTATGAT+TGG 0.332500 7_2:-65888660 Msa1070020:intron
TCATGGTAAACAATCATATC+TGG 0.336872 7_2:+65888817 None:intergenic
CCTACTTTAAATGATCAAAT+AGG 0.340260 7_2:-65884641 Msa1070020:CDS
AATTCCTGGACAACTTGATT+TGG 0.341371 7_2:+65889729 None:intergenic
CCACCACTTACATATAGATT+TGG 0.345520 7_2:-65885902 Msa1070020:CDS
TCCAGGCACCCTGAATTTGC+TGG 0.348294 7_2:+65884966 None:intergenic
AGCCAATTTGCTCCTGGCTT+TGG 0.349564 7_2:+65885359 None:intergenic
CCACCGCTTGGATATAGATT+TGG 0.350247 7_2:-65886109 Msa1070020:CDS
GGGCAATTTGGGGATTATAA+TGG 0.351503 7_2:+65891632 None:intergenic
GCTTGAAAATTCAGGTTGAT+AGG 0.354916 7_2:-65884436 Msa1070020:three_prime_UTR
CACCACCATGCTCCTCCTCC+TGG 0.359202 7_2:+65886229 None:intergenic
TTCATGCCAGAAAACGTATC+AGG 0.360939 7_2:-65885151 Msa1070020:CDS
ATCTACTACTCCATAGGTTC+TGG 0.362720 7_2:+65884793 None:intergenic
TGACATCCGGGTCATATTCC+TGG 0.366334 7_2:-65888132 Msa1070020:CDS
TTTATATTGTTGAAACAAAC+TGG 0.367453 7_2:-65884277 Msa1070020:three_prime_UTR
TTTCTTAAGCAGTTTCTTCC+TGG 0.369686 7_2:-65889762 Msa1070020:CDS
TGTAGTTTGCCTCCTTTCTT+GGG 0.371010 7_2:+65887308 None:intergenic
TACCAAAGCCAGGAGCAAAT+TGG 0.371663 7_2:-65885361 Msa1070020:CDS
GATGCTTCACATAACAAAAC+TGG 0.378324 7_2:-65886060 Msa1070020:CDS
CCTTGATATATGACATATAT+TGG 0.379166 7_2:+65887255 None:intergenic
CCCGCTTGGCAACAACCCTT+TGG 0.379771 7_2:+65890063 None:intergenic
GCTCAGCTCCACACTTTCCT+AGG 0.380117 7_2:+65891769 None:intergenic
TTATTAACGGAGGAATTCTC+TGG 0.384178 7_2:+65885748 None:intergenic
TATCTCACCTTATATGCTAA+TGG 0.389223 7_2:-65890240 Msa1070020:exon
TAGATTCTGGACCAATCATT+CGG 0.389987 7_2:+65885452 None:intergenic
ATTAATACCGATAATTTCAT+TGG 0.390440 7_2:-65885010 Msa1070020:CDS
ATGTCCATCGTGATCAAATC+TGG 0.393064 7_2:+65890001 None:intergenic
ATGGGTAAGCTTGAAAATTC+AGG 0.396966 7_2:-65884444 Msa1070020:three_prime_UTR
TGCATGTTATGAATCACTTC+GGG 0.399595 7_2:-65884248 None:intergenic
ATGATATAAAGAAAAGAAAA+TGG 0.408606 7_2:-65888204 Msa1070020:CDS
CAACATGATTGTTACCTCAT+AGG 0.410649 7_2:+65889908 None:intergenic
CTGCAAGAAATATTACTGAT+TGG 0.411422 7_2:-65885075 Msa1070020:CDS
TTCCTTTCGCCCAGAACCTA+TGG 0.411584 7_2:-65884803 Msa1070020:CDS
AGAACAAAACCGAGCATTCA+AGG 0.411771 7_2:-65885639 Msa1070020:CDS
TCATTCGGGTTTGTCTATCT+TGG 0.413250 7_2:+65885467 None:intergenic
GCCTGTTGGCAGTGTAGTCA+TGG 0.416847 7_2:+65885515 None:intergenic
TAATTTCTATAGGTTACAAT+TGG 0.427079 7_2:-65886573 Msa1070020:intron
TATCTAGATGTTAGATGTGT+TGG 0.431063 7_2:-65884478 Msa1070020:three_prime_UTR
CGTTTAGTCCTATATTGCTC+TGG 0.433752 7_2:+65890161 None:intergenic
ATCTCACATTTCTGTTGAAT+GGG 0.435644 7_2:-65890096 Msa1070020:CDS
CTTGAAAATTCAGGTTGATA+GGG 0.436970 7_2:-65884435 Msa1070020:three_prime_UTR
GTCATACTTAAATCATAGTA+AGG 0.437696 7_2:+65885538 None:intergenic
AGGAGTCCAGGCCCAGGAGG+AGG 0.438122 7_2:-65886241 Msa1070020:CDS
TGCAAGAAATATTACTGATT+GGG 0.439743 7_2:-65885074 Msa1070020:CDS
CCTATTTGATCATTTAAAGT+AGG 0.442467 7_2:+65884641 None:intergenic
GATAGACAAACCCGAATGAT+TGG 0.444589 7_2:-65885463 Msa1070020:CDS
AGGGGTGCTTCACTTTGTTC+GGG 0.446244 7_2:-65888850 Msa1070020:CDS
AGGTTCTGGGCGAAAGGAAC+TGG 0.447274 7_2:+65884807 None:intergenic
ATGGTTCTCCAGAGCAATAT+AGG 0.448577 7_2:-65890169 Msa1070020:CDS
TCCCTGCATCATATGCAAAC+TGG 0.449155 7_2:-65886538 Msa1070020:CDS
ACCAGCAAATTCAGGGTGCC+TGG 0.450331 7_2:-65884967 Msa1070020:CDS
GAACACTAAATAAGTTATGA+TGG 0.450851 7_2:+65884888 None:intergenic
AGATTCTGGACCAATCATTC+GGG 0.451414 7_2:+65885453 None:intergenic
TTGGAATATCGTTTGAAGCC+TGG 0.452698 7_2:+65885263 None:intergenic
CTTGGCGAAGACTTCAATAA+AGG 0.452793 7_2:-65887386 Msa1070020:CDS
GCCATTGCCAGATCCATTCC+AGG 0.452838 7_2:+65884949 None:intergenic
GCAGCTAGTGGATCTTGCCT+GGG 0.453568 7_2:+65885094 None:intergenic
GTGTGTCTGATTGACTCATA+AGG 0.453911 7_2:+65884833 None:intergenic
GAAATTGTAGGCGGTGGTGA+GGG 0.456750 7_2:+65891542 None:intergenic
CAGGGTGCCTGGAATGGATC+TGG 0.457650 7_2:-65884956 Msa1070020:CDS
CTTCATCTTCCAAGCTAGAC+TGG 0.460981 7_2:+65886199 None:intergenic
CATCTCCAGAAAGTAATTCC+TGG 0.461244 7_2:+65889715 None:intergenic
GTAATATTTCTTGCAGCTAG+TGG 0.461801 7_2:+65885082 None:intergenic
TTTGCAAACGTCTCTAACAT+TGG 0.462030 7_2:-65885203 Msa1070020:CDS
GCAATTAAATGGTGCAAGCC+TGG 0.462158 7_2:-65890198 Msa1070020:CDS
CAATATAACCAATTACGTTC+AGG 0.463122 7_2:-65884860 Msa1070020:CDS
AGGCGGTGGTGAGGGGAAAG+TGG 0.464420 7_2:+65891550 None:intergenic
CGAACTTGTTAAGAGTTTGA+AGG 0.465315 7_2:-65886810 Msa1070020:CDS
ACAGTATCATTATACGAGAA+AGG 0.465348 7_2:+65885781 None:intergenic
ATAATTACCGGTGAAATTGT+AGG 0.466975 7_2:+65891530 None:intergenic
GGTGCAAGCCTGGTTAGTTA+TGG 0.469377 7_2:-65890188 Msa1070020:CDS
ATTCACAAAAGGGATGAGAT+AGG 0.472169 7_2:-65884545 Msa1070020:three_prime_UTR
CATACTTGAGGTCGTGGAAC+CGG 0.472548 7_2:-65884616 Msa1070020:CDS
CAGTATCATTATACGAGAAA+GGG 0.472916 7_2:+65885782 None:intergenic
GTTCATAATCCTTGAATGCT+CGG 0.474142 7_2:+65885630 None:intergenic
GGGAATGTTACAGTGACATC+CGG 0.474724 7_2:-65888145 Msa1070020:CDS
GTACACAATTGAACATTCAA+TGG 0.475973 7_2:-65885842 Msa1070020:CDS
CTCATCAAGGACAACGGGAT+TGG 0.476228 7_2:-65885325 Msa1070020:CDS
CTCATTGCCTTGTCCCATTG+AGG 0.477090 7_2:+65888072 None:intergenic
CTCATCCATGTCATATCATC+AGG 0.478114 7_2:+65884680 None:intergenic
GTCCAGTTTGCATATGATGC+AGG 0.478775 7_2:+65886536 None:intergenic
TCTCCAAATCTATATGTAAG+TGG 0.478786 7_2:+65885899 None:intergenic
CCAAAGGGTTGTTGCCAAGC+GGG 0.480617 7_2:-65890063 Msa1070020:CDS
TCTGGAGATGAATTTCACTT+TGG 0.481121 7_2:-65889702 Msa1070020:CDS
CAAATTCAGGGTGCCTGGAA+TGG 0.481854 7_2:-65884962 Msa1070020:CDS
ACCACCATGCTCCTCCTCCT+GGG 0.485109 7_2:+65886230 None:intergenic
CCCATGACTACACTGCCAAC+AGG 0.485792 7_2:-65885516 Msa1070020:CDS
TGACATCCAAATTTCCTCAA+TGG 0.487454 7_2:-65888086 Msa1070020:CDS
GAAAGATAAATCAAATGTAC+TGG 0.487967 7_2:-65886462 Msa1070020:CDS
ATGTTTAGATCACTTTGCAC+TGG 0.488346 7_2:+65890122 None:intergenic
AGTCCCTCATCAAGGACAAC+GGG 0.488563 7_2:-65885330 Msa1070020:CDS
ATAATTTCATTGGTCAGCCT+TGG 0.490290 7_2:-65885000 Msa1070020:CDS
TGCTTTCTCCTCTTCATCCC+AGG 0.490732 7_2:+65888114 None:intergenic
TGTGTTGGAAAGAGAAAGCA+TGG 0.491663 7_2:-65884463 Msa1070020:three_prime_UTR
TTTAGATCACTTTGCACTGG+TGG 0.491752 7_2:+65890125 None:intergenic
ACAATTACGTAAATATCATA+AGG 0.492095 7_2:-65888758 Msa1070020:CDS
AACAAGTTCGTGCTGCGTCT+TGG 0.492550 7_2:+65886823 None:intergenic
GCTTCAAACGATATTCCAAT+GGG 0.494112 7_2:-65885259 Msa1070020:CDS
TATGGAGGGACGGGTTCTCT+GGG 0.494784 7_2:+65886160 None:intergenic
TAAATCAAATGTACTGGTAG+AGG 0.495032 7_2:-65886456 Msa1070020:intron
GAAAAGAAAATGGTCAAACT+TGG 0.496665 7_2:-65888194 Msa1070020:CDS
TCGTGATCAAATCTGGCAAA+TGG 0.497519 7_2:+65890008 None:intergenic
CACAGTTAAGAGTACTAGCC+GGG 0.497861 7_2:+65886771 None:intergenic
GAGCACAGGAGTCCAGGCCC+AGG 0.499157 7_2:-65886247 Msa1070020:CDS
GAATCAAGCCAATTTGCTCC+TGG 0.500105 7_2:+65885353 None:intergenic
TCTTCAGACCAGCAAATTCA+GGG 0.500856 7_2:-65884974 Msa1070020:CDS
GACATCCAAATTTCCTCAAT+GGG 0.501103 7_2:-65888085 Msa1070020:CDS
TGGATTTCTAATTAAGCTGA+AGG 0.501554 7_2:-65888640 Msa1070020:CDS
AAGTGAAGTGCTTTCCTATG+AGG 0.502687 7_2:-65889922 Msa1070020:intron
GGCTGTTAGTGCCCCTCGCA+TGG 0.503567 7_2:-65885053 Msa1070020:CDS
TTCAACGATTATGAAATGTC+AGG 0.503971 7_2:-65886034 Msa1070020:CDS
TGTCGAGAGACGGGTTCTGT+TGG 0.505359 7_2:+65885953 None:intergenic
AGGCTGACCAATGAAATTAT+CGG 0.505474 7_2:+65885003 None:intergenic
CCAATATATGTCATATATCA+AGG 0.507528 7_2:-65887255 Msa1070020:intron
GACCTGCAAAAGTCCAGAAA+AGG 0.508932 7_2:-65888607 Msa1070020:CDS
TCTACTACTCCATAGGTTCT+GGG 0.512303 7_2:+65884794 None:intergenic
TGATAAGAATTATGGAGGGA+CGG 0.512882 7_2:+65886150 None:intergenic
CTGCATGTTATGAATCACTT+CGG 0.513067 7_2:-65884249 Msa1070020:three_prime_UTR
ATTCAAGGATTATGAACTCT+CGG 0.514090 7_2:-65885624 Msa1070020:CDS
AGAGCCAAATCAAGTTGTCC+AGG 0.514668 7_2:-65889733 Msa1070020:CDS
AAATTGTAGGCGGTGGTGAG+GGG 0.514717 7_2:+65891543 None:intergenic
ACTGGAGCAAGATTCACAAA+AGG 0.515262 7_2:-65884556 Msa1070020:three_prime_UTR
TGATCTAGTGGATGAGAAGA+TGG 0.518345 7_2:+65884737 None:intergenic
GATAAGAATTATGGAGGGAC+GGG 0.519423 7_2:+65886151 None:intergenic
CCTTCGCGCCAACTTGCTCT+CGG 0.521040 7_2:+65891747 None:intergenic
CTCCATAGGTTCTGGGCGAA+AGG 0.522077 7_2:+65884801 None:intergenic
CTTCGGTTCTTACCAAAGCC+AGG 0.523206 7_2:-65885371 Msa1070020:CDS
TCATCAGGCACCAGAGCACC+AGG 0.523585 7_2:+65884695 None:intergenic
GGAAAGTGGAAAACGAAGTA+AGG 0.523882 7_2:+65891564 None:intergenic
GTTGCCAAGCGGGAACAGAT+TGG 0.526201 7_2:-65890053 Msa1070020:CDS
AAGTCAGATGATGGTCCCTT+CGG 0.526856 7_2:-65885388 Msa1070020:CDS
TAAAATTGGCCATTCCCCAT+TGG 0.527911 7_2:+65885244 None:intergenic
CTTGATTCAGTCCCTCATCA+AGG 0.528173 7_2:-65885338 Msa1070020:CDS
AGGTGAACCAAGAAATATGA+TGG 0.529602 7_2:-65887366 Msa1070020:CDS
TAGGATCATACTTGAGGTCG+TGG 0.530071 7_2:-65884622 Msa1070020:CDS
TGTTAATAACCAGTCTAGCT+TGG 0.530242 7_2:-65886208 Msa1070020:CDS
TATTAATGAACGGCTTTCAT+CGG 0.531588 7_2:+65890314 None:intergenic
GCACTTCACTTAAACTATCC+AGG 0.531960 7_2:+65889934 None:intergenic
CACTGCCAACAGGCTATCAC+TGG 0.532764 7_2:-65885506 Msa1070020:CDS
AGAAGAACTTGCATGAGCAT+TGG 0.532815 7_2:-65886688 Msa1070020:intron
GAATCTTCATCGGATGAGAA+AGG 0.533045 7_2:+65885988 None:intergenic
GACATCCGGGTCATATTCCT+GGG 0.533135 7_2:-65888131 Msa1070020:CDS
ACCGGTGAAATTGTAGGCGG+TGG 0.533268 7_2:+65891536 None:intergenic
GATAAGAATTGTCGAGAGAC+GGG 0.534554 7_2:+65885944 None:intergenic
TTCAATGGTTATGAACTCTC+AGG 0.535637 7_2:-65885827 Msa1070020:CDS
GCTGTGATAAGATTTATTAA+CGG 0.535743 7_2:+65885735 None:intergenic
ACACCAAGAAAACATTGGTA+AGG 0.539452 7_2:-65885425 Msa1070020:CDS
GGTATTAATGTGAGATTGAG+AGG 0.540132 7_2:+65885024 None:intergenic
GGGAGTTTCCTCCCGTGCCA+AGG 0.541221 7_2:+65884909 None:intergenic
GATCAAGGTCAGAGGCAAGC+TGG 0.541280 7_2:-65885181 Msa1070020:CDS
CGGGATGATTCCATCGGTGA+AGG 0.541376 7_2:-65885604 Msa1070020:CDS
ATGATGTTTGACAGGGTGCT+TGG 0.543416 7_2:-65887404 Msa1070020:intron
TGTGTCTGATTGACTCATAA+GGG 0.543563 7_2:+65884834 None:intergenic
CGATGACGAGCTCCACCGCT+TGG 0.544441 7_2:-65886121 Msa1070020:CDS
GTTGCACATGAAAGTTATCA+AGG 0.547807 7_2:+65886738 None:intergenic
TTCAAGGATTATGAACTCTC+GGG 0.549456 7_2:-65885623 Msa1070020:CDS
CTCAGATGATCCTTCACCGA+TGG 0.549658 7_2:+65885594 None:intergenic
ACCTATGGAGTAGTAGATGC+AGG 0.550339 7_2:-65884788 Msa1070020:CDS
GCCTGGAATGGATCTGGCAA+TGG 0.553538 7_2:-65884950 Msa1070020:CDS
CTGGAGCAAGATTCACAAAA+GGG 0.554035 7_2:-65884555 Msa1070020:three_prime_UTR
GGTAATATTTATTCTGACAC+AGG 0.554644 7_2:-65885130 Msa1070020:CDS
TAATCTAGTTCCGAAAATAA+CGG 0.554899 7_2:-65891722 Msa1070020:five_prime_UTR
CTGGCTTTGGTAAGAACCGA+AGG 0.556503 7_2:+65885372 None:intergenic
ACCAAAGGGTTGTTGCCAAG+CGG 0.557753 7_2:-65890064 Msa1070020:CDS
GATGCCAATCTGTTCCCGCT+TGG 0.557815 7_2:+65890049 None:intergenic
CCGAGAGCAAGTTGGCGCGA+AGG 0.558552 7_2:-65891747 Msa1070020:five_prime_UTR
CTCAGCTCCACACTTTCCTA+GGG 0.558840 7_2:+65891770 None:intergenic
AACCTAAGAACGAGTGTGAA+GGG 0.559031 7_2:+65891612 None:intergenic
TAATTAAGCTGAAGGAGAGG+TGG 0.559139 7_2:-65888632 Msa1070020:CDS
TGAAATTGTAGGCGGTGGTG+AGG 0.560978 7_2:+65891541 None:intergenic
CAGGATGATCCCATCAGTGA+GGG 0.561185 7_2:-65885808 Msa1070020:CDS
GGCTGTTCACTATTAATGAA+CGG 0.561528 7_2:+65890304 None:intergenic
GGCTTCAAACGATATTCCAA+TGG 0.562243 7_2:-65885260 Msa1070020:CDS
AACACTAAATAAGTTATGAT+GGG 0.562434 7_2:+65884889 None:intergenic
AACGATATTCCAATGGGGAA+TGG 0.562666 7_2:-65885253 Msa1070020:CDS
AGTCTATTTAGTCAGAGCCT+TGG 0.562741 7_2:-65884926 Msa1070020:CDS
TCACGATGGACATGAAGTCT+TGG 0.563479 7_2:-65889991 Msa1070020:CDS
GTCATATTCCTGGGATGAAG+AGG 0.563546 7_2:-65888122 Msa1070020:CDS
ATCAAATAGGATCATACTTG+AGG 0.564325 7_2:-65884628 Msa1070020:CDS
TGATAAGAATTGTCGAGAGA+CGG 0.566428 7_2:+65885943 None:intergenic
CAGGATGATCCCATCGGTGA+AGG 0.567090 7_2:-65886015 Msa1070020:CDS
GGGAACAGATTGGCATCAGT+TGG 0.568573 7_2:-65890043 Msa1070020:CDS
CGTCCACTGAAATGATCTAG+TGG 0.572037 7_2:+65884725 None:intergenic
ATTTAGTCAGAGCCTTGGCA+CGG 0.572165 7_2:-65884921 Msa1070020:CDS
TATTAACGGAGGAATTCTCT+GGG 0.573045 7_2:+65885749 None:intergenic
TTTAGTCAGAGCCTTGGCAC+GGG 0.573921 7_2:-65884920 Msa1070020:CDS
CAGGCCCAGGAGGAGGAGCA+TGG 0.574159 7_2:-65886234 Msa1070020:CDS
AGGTATCAAATGCTGAAAGC+AGG 0.575297 7_2:-65884339 Msa1070020:three_prime_UTR
TCAGAGATGATGATCATGAT+GGG 0.580024 7_2:-65888165 Msa1070020:CDS
TCTAACAAAAGAATCTTCAT+CGG 0.580598 7_2:+65885978 None:intergenic
ATCTTATCACAGCGATGATG+AGG 0.582360 7_2:-65885725 Msa1070020:CDS
TTCAGAGATGATGATCATGA+TGG 0.582825 7_2:-65888166 Msa1070020:CDS
CTGGAGAACCATAACTAACC+AGG 0.583931 7_2:+65890180 None:intergenic
CAGCTAGTGGATCTTGCCTG+GGG 0.584455 7_2:+65885095 None:intergenic
TTTCCAAATCTATATGAAAG+GGG 0.584653 7_2:+65885695 None:intergenic
TGATTTGGCTCTAAGTCACC+AGG 0.585102 7_2:+65889744 None:intergenic
AAAGGAGCTCCTTCACCGAT+GGG 0.586539 7_2:+65886006 None:intergenic
ACGTCTCTAACATTGGATCA+AGG 0.588129 7_2:-65885196 Msa1070020:CDS
AATCCCGTTGTCCTTGATGA+GGG 0.588768 7_2:+65885327 None:intergenic
TCTTTGATAAATAATTTGAA+CGG 0.588853 7_2:+65886716 None:intergenic
AATTAAGCTGAAGGAGAGGT+GGG 0.589330 7_2:-65888631 Msa1070020:CDS
GAAAGGAGCTCCTTCACCGA+TGG 0.589486 7_2:+65886005 None:intergenic
GGAATGTTACAGTGACATCC+GGG 0.591091 7_2:-65888144 Msa1070020:CDS
AGTCAGAGCCTTGGCACGGG+AGG 0.594185 7_2:-65884917 Msa1070020:CDS
CAATCCCGTTGTCCTTGATG+AGG 0.596160 7_2:+65885326 None:intergenic
ACACAGTTAAGAGTACTAGC+CGG 0.596710 7_2:+65886770 None:intergenic
ATGGGATGCTAATCACCAAA+GGG 0.596779 7_2:-65890078 Msa1070020:CDS
TTCAGTGGACGTGATGCACC+TGG 0.598005 7_2:-65884713 Msa1070020:CDS
TCCAGTTTGCATATGATGCA+GGG 0.599519 7_2:+65886537 None:intergenic
CTAACATCTAGATATGTACA+TGG 0.600906 7_2:+65884487 None:intergenic
ACCACCGCCTACAATTTCAC+CGG 0.601239 7_2:-65891537 Msa1070020:intron
CCAAATCTATATGAAAGGGG+TGG 0.601625 7_2:+65885698 None:intergenic
CAGCTAGCCCTAGGAAAGTG+TGG 0.601646 7_2:-65891777 Msa1070020:five_prime_UTR
AAGGCAATGAGCTTCAAAGA+AGG 0.601771 7_2:-65888060 Msa1070020:intron
AAATTCTACCAAATATTCTG+AGG 0.602467 7_2:-65888584 Msa1070020:intron
TTCTAATTAAGCTGAAGGAG+AGG 0.604463 7_2:-65888635 Msa1070020:CDS
GTGGGAGGAAGACCCAAGAA+AGG 0.606490 7_2:-65887320 Msa1070020:CDS
GAGAGGGTGCTACCATGCGA+GGG 0.607286 7_2:+65885041 None:intergenic
TTCATTAATAGTGAACAGCC+TGG 0.607810 7_2:-65890301 Msa1070020:five_prime_UTR
CAGGAAGTTACTTAATCCCC+AGG 0.608178 7_2:-65885111 Msa1070020:CDS
AACTCTCGGGATGATTCCAT+CGG 0.608690 7_2:-65885610 Msa1070020:CDS
CATCCACTAGATCATTTCAG+TGG 0.609335 7_2:-65884728 Msa1070020:CDS
CCAAATCTATATGTAAGTGG+TGG 0.609827 7_2:+65885902 None:intergenic
CCTGTTGGCAGTGTAGTCAT+GGG 0.611449 7_2:+65885516 None:intergenic
AATTTACACCAAGAAAACAT+TGG 0.611861 7_2:-65885430 Msa1070020:CDS
CATCGGTGAAGGATCATCTG+AGG 0.612176 7_2:-65885593 Msa1070020:CDS
ACTTGTGGACAGCTAGCCCT+AGG 0.614122 7_2:-65891786 Msa1070020:five_prime_UTR
CAAATTTCCTCAATGGGACA+AGG 0.614207 7_2:-65888079 Msa1070020:CDS
GATAACATTCATGCTAATGA+CGG 0.615175 7_2:-65887281 Msa1070020:CDS
TAACCTAAGAACGAGTGTGA+AGG 0.615489 7_2:+65891611 None:intergenic
TTCATCCCAGGAATATGACC+CGG 0.615803 7_2:+65888126 None:intergenic
ACCTGCATCTACTACTCCAT+AGG 0.618677 7_2:+65884787 None:intergenic
TGTTGTGATAAGAATTATGG+AGG 0.618980 7_2:+65886145 None:intergenic
GTTCTCTGGGACGCTAACAA+TGG 0.620420 7_2:+65886173 None:intergenic
GATGAAGAGGAGAAAGCATA+CGG 0.621806 7_2:-65888109 Msa1070020:CDS
TTTATGCTTAATAATGTGGG+AGG 0.622494 7_2:-65887335 Msa1070020:CDS
TAGTAGATGCAGGTACACAT+AGG 0.623213 7_2:-65884778 Msa1070020:CDS
ATCGGTGAAGGATCATCTGA+GGG 0.624551 7_2:-65885592 Msa1070020:CDS
TTACACAGGAAGTCAGATGA+TGG 0.625201 7_2:-65885397 Msa1070020:CDS
TCTCTAATTCAAGTGTTGTG+TGG 0.625886 7_2:-65891665 Msa1070020:five_prime_UTR
CAATTATGAAAGTACACTTG+TGG 0.628963 7_2:-65891801 Msa1070020:five_prime_UTR
GTGATAAGATTTATTAACGG+AGG 0.632896 7_2:+65885738 None:intergenic
GATCATCTGAGGGTCATGCA+TGG 0.633247 7_2:-65885582 Msa1070020:CDS
GAGCTGAGCCGAGAGCAAGT+TGG 0.633973 7_2:-65891755 Msa1070020:five_prime_UTR
GGTATCATCTAAAAGCATCC+CGG 0.638736 7_2:-65886789 Msa1070020:CDS
CCAAATCTATATCCAAGCGG+TGG 0.639597 7_2:+65886109 None:intergenic
AGTATCATTATACGAGAAAG+GGG 0.642248 7_2:+65885783 None:intergenic
TCATACTTAAATCATAGTAA+GGG 0.643572 7_2:+65885539 None:intergenic
ATTTACCAGTGATAGCCTGT+TGG 0.645383 7_2:+65885501 None:intergenic
TTTGCCAGATTTGATCACGA+TGG 0.649072 7_2:-65890005 Msa1070020:CDS
TGGTGCCTGATGATATGACA+TGG 0.651255 7_2:-65884685 Msa1070020:CDS
CAGTCCCTCATCAAGGACAA+CGG 0.651612 7_2:-65885331 Msa1070020:CDS
AATGGGATGCTAATCACCAA+AGG 0.652621 7_2:-65890079 Msa1070020:CDS
TGGCTTTGGTAAGAACCGAA+GGG 0.653359 7_2:+65885373 None:intergenic
GGATGATCCCATCAGTGAGG+GGG 0.656394 7_2:-65885806 Msa1070020:CDS
GGAGGAAGACCCAAGAAAGG+AGG 0.658566 7_2:-65887317 Msa1070020:CDS
GTAAGGAATGAGATTGAGCG+AGG 0.660641 7_2:+65891581 None:intergenic
AGGATGATCCCATCAGTGAG+GGG 0.665172 7_2:-65885807 Msa1070020:CDS
TAACATTGGATCAAGGTCAG+AGG 0.665378 7_2:-65885189 Msa1070020:CDS
GAAAGGAGGCAAACTACACA+AGG 0.668351 7_2:-65887303 Msa1070020:CDS
AAATGTCAGGATGATCCCAT+CGG 0.670910 7_2:-65886021 Msa1070020:CDS
TGCTGGTCTGAAGAGAACCA+AGG 0.672607 7_2:+65884983 None:intergenic
AGAGGGTGCTACCATGCGAG+GGG 0.674689 7_2:+65885042 None:intergenic
GTATTAATGTGAGATTGAGA+GGG 0.675665 7_2:+65885025 None:intergenic
TCAGGATGATCCCATCAGTG+AGG 0.678980 7_2:-65885809 Msa1070020:CDS
TTGGTAAGGAGTTGTTACAC+AGG 0.681191 7_2:-65885411 Msa1070020:CDS
CGAGTGTGAAGGGCAATTTG+GGG 0.683926 7_2:+65891622 None:intergenic
GTTGTGATAAGAATTATGGA+GGG 0.700399 7_2:+65886146 None:intergenic
ACATGGTGTTAAGTTGAGCA+TGG 0.703161 7_2:+65884504 None:intergenic
GCCCAGGAGGAGGAGCATGG+TGG 0.703424 7_2:-65886231 Msa1070020:CDS
TTACCAAATCTATATCCAAG+CGG 0.703973 7_2:+65886106 None:intergenic
ATTACCGGTGAAATTGTAGG+CGG 0.740081 7_2:+65891533 None:intergenic
GTGTTGGAAAGAGAAAGCAT+GGG 0.741213 7_2:-65884462 Msa1070020:three_prime_UTR
TCTAGTGGATGAGAAGATGG+TGG 0.755273 7_2:+65884740 None:intergenic
CTCGACAATTCTTATCACAG+CGG 0.757420 7_2:-65885937 Msa1070020:CDS
CTTCAAACGATATTCCAATG+GGG 0.772354 7_2:-65885258 Msa1070020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATAAAACAAAAAATATAA+AGG + chr7_2:65886851-65886870 None:intergenic 10.0%
!!! ATATTTTTGATAGATAAAAA+TGG + chr7_2:65888275-65888294 None:intergenic 10.0%
!!! AATGTTTTTATTTCTTATAT+TGG - chr7_2:65888651-65888670 Msa1070020:intron 10.0%
!! GAATTAATATAAATCAAATT+AGG + chr7_2:65889220-65889239 None:intergenic 10.0%
!!! GAAAAAAATATTTTATCAAA+AGG - chr7_2:65890533-65890552 Msa1070020:intron 10.0%
!!! GATTATTTAATAATTTTCAA+AGG - chr7_2:65891850-65891869 Msa1070020:five_prime_UTR 10.0%
!!! TTATATTGTTTTAATTTTGG+TGG + chr7_2:65884270-65884289 None:intergenic 15.0%
!! ATAGAGAAATAAATAATTAC+CGG + chr7_2:65884694-65884713 None:intergenic 15.0%
!!! TTTTTGAAATATGATAATGT+AGG - chr7_2:65885334-65885353 Msa1070020:CDS 15.0%
!! TATATTTATGATGACATATT+TGG + chr7_2:65885539-65885558 None:intergenic 15.0%
!!! ACAAAAACTGTTTATATTTT+TGG + chr7_2:65886349-65886368 None:intergenic 15.0%
!!! TTTTATTGAATATTGAGAAT+AGG + chr7_2:65887122-65887141 None:intergenic 15.0%
!! ATGATATAAAGAAAAGAAAA+TGG - chr7_2:65888005-65888024 Msa1070020:intron 15.0%
!!! TCAATTTTTTTTTATCTAAG+AGG + chr7_2:65888252-65888271 None:intergenic 15.0%
!!! CAAAAAAAAATACTATTTTG+TGG - chr7_2:65889256-65889275 Msa1070020:intron 15.0%
!! TCTTTGATAAATAATTTGAA+CGG + chr7_2:65889496-65889515 None:intergenic 15.0%
!!! AGAAGATATTTAATTTCTAT+AGG - chr7_2:65889626-65889645 Msa1070020:intron 15.0%
!!! GAGAAAAATATTTTATCAAA+AGG - chr7_2:65890329-65890348 Msa1070020:intron 15.0%
!!! AAAAATATTTTATCAAAAGG+AGG - chr7_2:65890332-65890351 Msa1070020:intron 15.0%
!! CAAAATTAACTATGTTAATT+AGG + chr7_2:65891631-65891650 None:intergenic 15.0%
!! TATGGTTAAATTTATCCATT+AGG - chr7_2:65885149-65885168 Msa1070020:CDS 20.0%
!! ATGGTTAAATTTATCCATTA+GGG - chr7_2:65885150-65885169 Msa1070020:CDS 20.0%
!! AAAAAGTTACTGTAAAAAGT+TGG + chr7_2:65885407-65885426 None:intergenic 20.0%
!! ATAACTAGTGAAGATAAATA+AGG - chr7_2:65885556-65885575 Msa1070020:CDS 20.0%
!! ATTGCAAACTTTAATCATTA+TGG - chr7_2:65885590-65885609 Msa1070020:CDS 20.0%
!!! TCTTTATATTTTCTTTGCAT+AGG - chr7_2:65886560-65886579 Msa1070020:CDS 20.0%
!!! ACAATATTTCAGATTTTAGA+AGG - chr7_2:65886650-65886669 Msa1070020:intron 20.0%
!!! AATCAGTAAATTACTGTTTT+CGG + chr7_2:65886736-65886755 None:intergenic 20.0%
!!! AATTTACTGATTTCAGATTT+TGG - chr7_2:65886744-65886763 Msa1070020:CDS 20.0%
!!! ATCAAATGAAATGTTTTACA+AGG - chr7_2:65886777-65886796 Msa1070020:CDS 20.0%
!!! TTTGTATTATTAATTTGCTG+AGG + chr7_2:65887246-65887265 None:intergenic 20.0%
!! ACAATTACGTAAATATCATA+AGG - chr7_2:65887451-65887470 Msa1070020:intron 20.0%
!!! ATATGTTGTCATTTATCATT+TGG - chr7_2:65887537-65887556 Msa1070020:intron 20.0%
!!! TATTCCATAATTTTATGACA+AGG - chr7_2:65887731-65887750 Msa1070020:intron 20.0%
!! ATGATTGAAAGAAATAATCT+GGG - chr7_2:65887808-65887827 Msa1070020:intron 20.0%
!!! GTATTTTATTAGAAAGTGTA+TGG - chr7_2:65888405-65888424 Msa1070020:intron 20.0%
!! TAATTTCTATAGGTTACAAT+TGG - chr7_2:65889636-65889655 Msa1070020:intron 20.0%
!!! GTAAAAGATGTTTTATCAAA+AGG - chr7_2:65890122-65890141 Msa1070020:CDS 20.0%
!!! TTTTCCAAATCTATATGAAA+GGG + chr7_2:65890518-65890537 None:intergenic 20.0%
!!! TTTTTCCAAATCTATATGAA+AGG + chr7_2:65890519-65890538 None:intergenic 20.0%
!! TCATACTTAAATCATAGTAA+GGG + chr7_2:65890673-65890692 None:intergenic 20.0%
!! CCTTAAAATGACTATAAAAT+TGG + chr7_2:65890982-65891001 None:intergenic 20.0%
!!! CCAATTTTATAGTCATTTTA+AGG - chr7_2:65890979-65890998 Msa1070020:intron 20.0%
!! ATTAATACCGATAATTTCAT+TGG - chr7_2:65891199-65891218 Msa1070020:intron 20.0%
!! AACACTAAATAAGTTATGAT+GGG + chr7_2:65891323-65891342 None:intergenic 20.0%
!!! AATTAGGTAAAACATTTTAC+CGG + chr7_2:65891615-65891634 None:intergenic 20.0%
!! TTTATATTGTTGAAACAAAC+TGG - chr7_2:65891932-65891951 Msa1070020:five_prime_UTR 20.0%
! AACATACATCCAATAAAAAG+CGG - chr7_2:65884380-65884399 Msa1070020:three_prime_UTR 25.0%
!! TAATCTAGTTCCGAAAATAA+CGG - chr7_2:65884487-65884506 Msa1070020:three_prime_UTR 25.0%
!! TATAGAAAACCCTTTTCATT+GGG + chr7_2:65885016-65885035 None:intergenic 25.0%
!! AATGAAAAGGGTTTTCTATA+GGG - chr7_2:65885016-65885035 Msa1070020:CDS 25.0%
! AAAAAAATCAACATCCCTAA+TGG + chr7_2:65885167-65885186 None:intergenic 25.0%
!!! TTAGGGATGTTGATTTTTTT+TGG - chr7_2:65885167-65885186 Msa1070020:CDS 25.0%
!!! TGTTATTTCAATATGACATG+TGG - chr7_2:65885221-65885240 Msa1070020:CDS 25.0%
!! GTTATTTCAATATGACATGT+GGG - chr7_2:65885222-65885241 Msa1070020:CDS 25.0%
!!! TTACAGTAACTTTTTTCCTT+TGG - chr7_2:65885412-65885431 Msa1070020:CDS 25.0%
!!! TTTGATTTGCAGAATAAGTA+TGG - chr7_2:65885510-65885529 Msa1070020:CDS 25.0%
! ATAACAATATAGACCATGTT+TGG + chr7_2:65885678-65885697 None:intergenic 25.0%
!! ATATTGTTATTCCTTAACCT+TGG - chr7_2:65885688-65885707 Msa1070020:CDS 25.0%
!!! GTTTTGTTGAAACATAGAAT+TGG - chr7_2:65885727-65885746 Msa1070020:CDS 25.0%
!! TAATTGAATCTCTTTGCTTT+TGG - chr7_2:65885854-65885873 Msa1070020:CDS 25.0%
! CAAAGAAGAAAGCAATTAAA+TGG - chr7_2:65886000-65886019 Msa1070020:CDS 25.0%
! AGACAATTTAGAAATACTCT+TGG + chr7_2:65886372-65886391 None:intergenic 25.0%
!!! CATCTTACCATTTTAAGAAA+GGG + chr7_2:65886536-65886555 None:intergenic 25.0%
!!! ACATCTTACCATTTTAAGAA+AGG + chr7_2:65886537-65886556 None:intergenic 25.0%
!!! TTTTAGAAGGATGAAAACTA+TGG - chr7_2:65886663-65886682 Msa1070020:intron 25.0%
! TTTAGAAGGATGAAAACTAT+GGG - chr7_2:65886664-65886683 Msa1070020:intron 25.0%
! CTTGTAAAATAGGCAAAATT+TGG + chr7_2:65886711-65886730 None:intergenic 25.0%
!! CAAAGAAAACGAGATAATTT+TGG + chr7_2:65886810-65886829 None:intergenic 25.0%
!! CAAAATTATCTCGTTTTCTT+TGG - chr7_2:65886808-65886827 Msa1070020:CDS 25.0%
! AGAATGAGTTTACTACATAA+TGG - chr7_2:65887003-65887022 Msa1070020:intron 25.0%
!!! CTACATAATGGTTATTTTCT+TGG - chr7_2:65887015-65887034 Msa1070020:intron 25.0%
! ATTGAATATTGAGAATAGGA+TGG + chr7_2:65887118-65887137 None:intergenic 25.0%
! AAATTGATAGAAACAGTTGA+AGG + chr7_2:65887155-65887174 None:intergenic 25.0%
! GAAAAAAGAACTTAAGTTTG+CGG - chr7_2:65887268-65887287 Msa1070020:CDS 25.0%
! AAAAAAGAACTTAAGTTTGC+GGG - chr7_2:65887269-65887288 Msa1070020:CDS 25.0%
! AAATTCTACCAAATATTCTG+AGG - chr7_2:65887625-65887644 Msa1070020:intron 25.0%
!! CAGATTATTTCTTTCAATCA+TGG + chr7_2:65887809-65887828 None:intergenic 25.0%
! CATGATTGAAAGAAATAATC+TGG - chr7_2:65887807-65887826 Msa1070020:intron 25.0%
! TGATTGAAAGAAATAATCTG+GGG - chr7_2:65887809-65887828 Msa1070020:intron 25.0%
! AAACAATACAGACACTAAAT+AGG + chr7_2:65887946-65887965 None:intergenic 25.0%
! GATATTTGGTTGTTATGTTA+TGG - chr7_2:65888224-65888243 Msa1070020:intron 25.0%
! AATGAGTATCTATAACAAGT+AGG - chr7_2:65888308-65888327 Msa1070020:intron 25.0%
! ACACTTTCTAATAAAATACC+AGG + chr7_2:65888404-65888423 None:intergenic 25.0%
! AGAGCTATCTAAGTATTTAA+GGG + chr7_2:65888510-65888529 None:intergenic 25.0%
! TAACATAGTCAGAAGAAATA+AGG + chr7_2:65888564-65888583 None:intergenic 25.0%
!!! ATATTGGTATTTTGATTTGC+TGG - chr7_2:65888667-65888686 Msa1070020:intron 25.0%
! ATAACAAAATGATGTTTGAC+AGG - chr7_2:65888797-65888816 Msa1070020:CDS 25.0%
! TAACAAAATGATGTTTGACA+GGG - chr7_2:65888798-65888817 Msa1070020:CDS 25.0%
!! AGCTTTTATGCTTAATAATG+TGG - chr7_2:65888870-65888889 Msa1070020:intron 25.0%
!! GCTTTTATGCTTAATAATGT+GGG - chr7_2:65888871-65888890 Msa1070020:intron 25.0%
! CCTTGATATATGACATATAT+TGG + chr7_2:65888957-65888976 None:intergenic 25.0%
! CCAATATATGTCATATATCA+AGG - chr7_2:65888954-65888973 Msa1070020:intron 25.0%
!!! ACAATCATTTTTTGTCACAT+CGG - chr7_2:65889110-65889129 Msa1070020:intron 25.0%
! GAAAGATAAATCAAATGTAC+TGG - chr7_2:65889747-65889766 Msa1070020:CDS 25.0%
!!! TTTTAATGGATCTTCAGAAA+AGG + chr7_2:65889784-65889803 None:intergenic 25.0%
! TTGAATTTGACAAGATACTT+AGG - chr7_2:65889849-65889868 Msa1070020:intron 25.0%
!!! GGTTTTAACAAAAACCTTAA+TGG + chr7_2:65889905-65889924 None:intergenic 25.0%
! GTATGGAAAATTAATGGAAA+AGG + chr7_2:65889926-65889945 None:intergenic 25.0%
!! TTTCCATTAATTTTCCATAC+AGG - chr7_2:65889926-65889945 Msa1070020:CDS 25.0%
! TCTAACAAAAGAATCTTCAT+CGG + chr7_2:65890234-65890253 None:intergenic 25.0%
! GCTGTGATAAGATTTATTAA+CGG + chr7_2:65890477-65890496 None:intergenic 25.0%
! TTTCCAAATCTATATGAAAG+GGG + chr7_2:65890517-65890536 None:intergenic 25.0%
! GTCATACTTAAATCATAGTA+AGG + chr7_2:65890674-65890693 None:intergenic 25.0%
! AATTTACACCAAGAAAACAT+TGG - chr7_2:65890779-65890798 Msa1070020:intron 25.0%
!!! TCTTTTTTGTTCATGATGAT+AGG + chr7_2:65890912-65890931 None:intergenic 25.0%
!! TGCAAGAAATATTACTGATT+GGG - chr7_2:65891135-65891154 Msa1070020:intron 25.0%
! GAACACTAAATAAGTTATGA+TGG + chr7_2:65891324-65891343 None:intergenic 25.0%
!!! TCATTTAAAGTAGGATTTTG+AGG + chr7_2:65891562-65891581 None:intergenic 25.0%
!! CCTATTTGATCATTTAAAGT+AGG + chr7_2:65891571-65891590 None:intergenic 25.0%
! CCTACTTTAAATGATCAAAT+AGG - chr7_2:65891568-65891587 Msa1070020:five_prime_UTR 25.0%
!! AACATAGTTAATTTTGTGAC+TGG - chr7_2:65891635-65891654 Msa1070020:five_prime_UTR 25.0%
! ACAAAATATAGCTCAAAAAG+AGG + chr7_2:65891898-65891917 None:intergenic 25.0%
! CAATTATGAAAGTACACTTG+TGG - chr7_2:65884408-65884427 Msa1070020:three_prime_UTR 30.0%
ATAATTACCGGTGAAATTGT+AGG + chr7_2:65884682-65884701 None:intergenic 30.0%
TTTCATTATTCCTGTCAATG+CGG - chr7_2:65884740-65884759 Msa1070020:CDS 30.0%
! TCCAATGTTTTTCTTCGTAT+TGG - chr7_2:65884779-65884798 Msa1070020:CDS 30.0%
! CCAATGTTTTTCTTCGTATT+GGG - chr7_2:65884780-65884799 Msa1070020:CDS 30.0%
GTTAAATTAGTATGCGTTGT+CGG - chr7_2:65884826-65884845 Msa1070020:CDS 30.0%
ATTTGAATATTTGGACTGCA+TGG - chr7_2:65884966-65884985 Msa1070020:CDS 30.0%
! CTATAGAAAACCCTTTTCAT+TGG + chr7_2:65885017-65885036 None:intergenic 30.0%
! CAATGAAAAGGGTTTTCTAT+AGG - chr7_2:65885015-65885034 Msa1070020:CDS 30.0%
! ATGAAAAGGGTTTTCTATAG+GGG - chr7_2:65885017-65885036 Msa1070020:CDS 30.0%
! GATAGCTTCATGCTTTAAAT+TGG - chr7_2:65885039-65885058 Msa1070020:CDS 30.0%
!!! GTTGCATTGCAGTTTTATTA+TGG - chr7_2:65885131-65885150 Msa1070020:CDS 30.0%
! AAGTCCAATTTTCTGTAGAA+CGG - chr7_2:65885306-65885325 Msa1070020:CDS 30.0%
TATTCCGTTCTACAGAAAAT+TGG + chr7_2:65885313-65885332 None:intergenic 30.0%
AAGTTCAAAATACACACCAA+AGG + chr7_2:65885431-65885450 None:intergenic 30.0%
AACTGCTTAATGGAAAATTG+TGG + chr7_2:65885616-65885635 None:intergenic 30.0%
ACAGAATAAGAACTGCTTAA+TGG + chr7_2:65885626-65885645 None:intergenic 30.0%
TTATTCTGTAGAGGTAAGAA+TGG - chr7_2:65885637-65885656 Msa1070020:CDS 30.0%
TAAAAACTTTGCACCAAACA+TGG - chr7_2:65885662-65885681 Msa1070020:CDS 30.0%
AGTAAGTTACTTCCTATGAA+AGG + chr7_2:65885764-65885783 None:intergenic 30.0%
!!! GATCTTGTTTTGACATATTG+AGG - chr7_2:65885809-65885828 Msa1070020:CDS 30.0%
TATTAATGAACGGCTTTCAT+CGG + chr7_2:65885898-65885917 None:intergenic 30.0%
TATCTCACCTTATATGCTAA+TGG - chr7_2:65885969-65885988 Msa1070020:CDS 30.0%
! AGGACTAAACGAAAGAATTT+TGG - chr7_2:65886060-65886079 Msa1070020:CDS 30.0%
AATCTCACATTTCTGTTGAA+TGG - chr7_2:65886112-65886131 Msa1070020:CDS 30.0%
ATCTCACATTTCTGTTGAAT+GGG - chr7_2:65886113-65886132 Msa1070020:CDS 30.0%
! ATTGTCTTTTGTGAAACCTT+TGG - chr7_2:65886385-65886404 Msa1070020:intron 30.0%
TTGGAAACCCTTTCTTAAAA+TGG - chr7_2:65886526-65886545 Msa1070020:CDS 30.0%
AGCTCATGGAAAATATTTAG+TGG + chr7_2:65886604-65886623 None:intergenic 30.0%
!!! AACATTCATTTTAGAGCTCA+TGG + chr7_2:65886618-65886637 None:intergenic 30.0%
!! TGAGCTCTAAAATGAATGTT+AGG - chr7_2:65886618-65886637 Msa1070020:intron 30.0%
!!! GCAAAATTTGGTTTTAGTCT+TGG + chr7_2:65886699-65886718 None:intergenic 30.0%
! GTTTTCGGTTCTTGTAAAAT+AGG + chr7_2:65886721-65886740 None:intergenic 30.0%
!!! TTACTGATTTCAGATTTTGG+AGG - chr7_2:65886747-65886766 Msa1070020:CDS 30.0%
CTATACATATTCTCAACTCT+TGG - chr7_2:65886946-65886965 Msa1070020:intron 30.0%
AATTTCTCAATTCTCTTCAG+TGG - chr7_2:65887170-65887189 Msa1070020:intron 30.0%
ATTTCTCAATTCTCTTCAGT+GGG - chr7_2:65887171-65887190 Msa1070020:intron 30.0%
AGATGATATGCCATAACATT+AGG + chr7_2:65887199-65887218 None:intergenic 30.0%
TGCATATTACCATTCATTTG+TGG + chr7_2:65887334-65887353 None:intergenic 30.0%
AATGGTAATATGCATTTGCA+GGG - chr7_2:65887340-65887359 Msa1070020:CDS 30.0%
TCATGGTAAACAATCATATC+TGG + chr7_2:65887395-65887414 None:intergenic 30.0%
!! GATTCAGATCTTGTTTCTTT+TGG - chr7_2:65887503-65887522 Msa1070020:intron 30.0%
TTATCATTTGGCAGTATGAT+TGG - chr7_2:65887549-65887568 Msa1070020:intron 30.0%
TGGATTTCTAATTAAGCTGA+AGG - chr7_2:65887569-65887588 Msa1070020:intron 30.0%
! TTTGGTAGAATTTCCTTTTC+TGG + chr7_2:65887618-65887637 None:intergenic 30.0%
ATGTCAAACCTCAGAATATT+TGG + chr7_2:65887636-65887655 None:intergenic 30.0%
!! ATATTCTGAGGTTTGACATT+TGG - chr7_2:65887637-65887656 Msa1070020:intron 30.0%
ACGTCCTTGTCATAAAATTA+TGG + chr7_2:65887738-65887757 None:intergenic 30.0%
TACTTACGTACTTACATAGA+TGG - chr7_2:65887779-65887798 Msa1070020:intron 30.0%
GAAAAGAAAATGGTCAAACT+TGG - chr7_2:65888015-65888034 Msa1070020:intron 30.0%
ATCTATAACAAGTAGGTACA+TGG - chr7_2:65888315-65888334 Msa1070020:intron 30.0%
AATTTAGCATCAAATACCTC+GGG + chr7_2:65888373-65888392 None:intergenic 30.0%
CAATTTAGCATCAAATACCT+CGG + chr7_2:65888374-65888393 None:intergenic 30.0%
ATGCTAAATTGATAGAAACC+TGG - chr7_2:65888383-65888402 Msa1070020:intron 30.0%
CTAAGTATTTAAGGGGAATT+GGG + chr7_2:65888502-65888521 None:intergenic 30.0%
TCTAAGTATTTAAGGGGAAT+TGG + chr7_2:65888503-65888522 None:intergenic 30.0%
GAGCTATCTAAGTATTTAAG+GGG + chr7_2:65888509-65888528 None:intergenic 30.0%
GAGAGCTATCTAAGTATTTA+AGG + chr7_2:65888511-65888530 None:intergenic 30.0%
CTATTAATATGAGAGGATGA+GGG + chr7_2:65888533-65888552 None:intergenic 30.0%
ATGTTGCCTATTAATATGAG+AGG + chr7_2:65888540-65888559 None:intergenic 30.0%
ACTATATATCTTCTACTGGA+TGG - chr7_2:65888691-65888710 Msa1070020:intron 30.0%
TTTATGCTTAATAATGTGGG+AGG - chr7_2:65888874-65888893 Msa1070020:intron 30.0%
GATAACATTCATGCTAATGA+CGG - chr7_2:65888928-65888947 Msa1070020:intron 30.0%
ATCTCTGAACAATACTGAAT+TGG - chr7_2:65888995-65889014 Msa1070020:intron 30.0%
TGAACAATACTGAATTGGTA+GGG - chr7_2:65889000-65889019 Msa1070020:intron 30.0%
! TAGTGCTACTAAGTAATTAG+AGG - chr7_2:65889057-65889076 Msa1070020:intron 30.0%
! AGTGCTACTAAGTAATTAGA+GGG - chr7_2:65889058-65889077 Msa1070020:intron 30.0%
TGTTGTCTCATCATAAAAGA+AGG + chr7_2:65889286-65889305 None:intergenic 30.0%
CAGAATTATTAGCATCTCTA+AGG - chr7_2:65889331-65889350 Msa1070020:intron 30.0%
! TAGTACTCTTAACTGTGTTT+TGG - chr7_2:65889444-65889463 Msa1070020:intron 30.0%
! AGTACTCTTAACTGTGTTTT+GGG - chr7_2:65889445-65889464 Msa1070020:intron 30.0%
AATAACAATTCGTCAGAAGT+AGG + chr7_2:65889562-65889581 None:intergenic 30.0%
TCTAGTAAGCAAAGCAATAA+TGG + chr7_2:65889609-65889628 None:intergenic 30.0%
! TAAATCAAATGTACTGGTAG+AGG - chr7_2:65889753-65889772 Msa1070020:CDS 30.0%
! TCACTGCTAGGAAATTTTAA+TGG + chr7_2:65889798-65889817 None:intergenic 30.0%
CATCCTGTATGGAAAATTAA+TGG + chr7_2:65889932-65889951 None:intergenic 30.0%
GTTGTGATAAGAATTATGGA+GGG + chr7_2:65890066-65890085 None:intergenic 30.0%
TGTTGTGATAAGAATTATGG+AGG + chr7_2:65890067-65890086 None:intergenic 30.0%
TTACCAAATCTATATCCAAG+CGG + chr7_2:65890106-65890125 None:intergenic 30.0%
TTCAACGATTATGAAATGTC+AGG - chr7_2:65890175-65890194 Msa1070020:CDS 30.0%
TCTCCAAATCTATATGTAAG+TGG + chr7_2:65890313-65890332 None:intergenic 30.0%
GTACACAATTGAACATTCAA+TGG - chr7_2:65890367-65890386 Msa1070020:intron 30.0%
AGTATCATTATACGAGAAAG+GGG + chr7_2:65890429-65890448 None:intergenic 30.0%
CAGTATCATTATACGAGAAA+GGG + chr7_2:65890430-65890449 None:intergenic 30.0%
ACAGTATCATTATACGAGAA+AGG + chr7_2:65890431-65890450 None:intergenic 30.0%
GTGATAAGATTTATTAACGG+AGG + chr7_2:65890474-65890493 None:intergenic 30.0%
ATTCAAGGATTATGAACTCT+CGG - chr7_2:65890585-65890604 Msa1070020:intron 30.0%
! TCTTGGTGTAAATTAGATTC+TGG + chr7_2:65890773-65890792 None:intergenic 30.0%
ATCATGAACAAAAAAGAGCT+GGG - chr7_2:65890915-65890934 Msa1070020:intron 30.0%
! ATATTACCTGATACGTTTTC+TGG + chr7_2:65891067-65891086 None:intergenic 30.0%
GGTAATATTTATTCTGACAC+AGG - chr7_2:65891079-65891098 Msa1070020:intron 30.0%
CTGCAAGAAATATTACTGAT+TGG - chr7_2:65891134-65891153 Msa1070020:intron 30.0%
GTATTAATGTGAGATTGAGA+GGG + chr7_2:65891187-65891206 None:intergenic 30.0%
CAATATAACCAATTACGTTC+AGG - chr7_2:65891349-65891368 Msa1070020:intron 30.0%
!! TTTAAAGTAGGATTTTGAGG+AGG + chr7_2:65891559-65891578 None:intergenic 30.0%
ATCAAATAGGATCATACTTG+AGG - chr7_2:65891581-65891600 Msa1070020:five_prime_UTR 30.0%
CTAACATCTAGATATGTACA+TGG + chr7_2:65891725-65891744 None:intergenic 30.0%
TATCTAGATGTTAGATGTGT+TGG - chr7_2:65891731-65891750 Msa1070020:five_prime_UTR 30.0%
!! CTTGAAAATTCAGGTTGATA+GGG - chr7_2:65891774-65891793 Msa1070020:five_prime_UTR 30.0%
!!! ATTGTCTCTCCGCTTTTTAT+TGG + chr7_2:65884392-65884411 None:intergenic 35.0%
! TCTCTAATTCAAGTGTTGTG+TGG - chr7_2:65884544-65884563 Msa1070020:three_prime_UTR 35.0%
CCCAATACGAAGAAAAACAT+TGG + chr7_2:65884783-65884802 None:intergenic 35.0%
! TTTTTCTTCGTATTGGGAGT+GGG - chr7_2:65884786-65884805 Msa1070020:CDS 35.0%
TTGGAAGAGATGAAATAGTG+TGG - chr7_2:65884918-65884937 Msa1070020:CDS 35.0%
TGGAAGAGATGAAATAGTGT+GGG - chr7_2:65884919-65884938 Msa1070020:CDS 35.0%
AGAACAAACTCCCAATGAAA+AGG - chr7_2:65885003-65885022 Msa1070020:CDS 35.0%
GAACAAACTCCCAATGAAAA+GGG - chr7_2:65885004-65885023 Msa1070020:CDS 35.0%
CTGGAGCATAAATTCAACAA+TGG + chr7_2:65885086-65885105 None:intergenic 35.0%
TCACTAAAAACACAGAATGC+TGG + chr7_2:65885105-65885124 None:intergenic 35.0%
GTTCTACAGAAAATTGGACT+TGG + chr7_2:65885307-65885326 None:intergenic 35.0%
GATAATGTAGGTGACCTAAT+AGG - chr7_2:65885346-65885365 Msa1070020:CDS 35.0%
TTCAACTATAGTCGCCTATT+AGG + chr7_2:65885363-65885382 None:intergenic 35.0%
AAGCAGTTCTTATTCTGTAG+AGG - chr7_2:65885628-65885647 Msa1070020:CDS 35.0%
GCTTAGTTGAATCCTTTCAT+AGG - chr7_2:65885749-65885768 Msa1070020:CDS 35.0%
!!! TGTTTTGACATATTGAGGCA+TGG - chr7_2:65885814-65885833 Msa1070020:CDS 35.0%
GGCTGTTCACTATTAATGAA+CGG + chr7_2:65885908-65885927 None:intergenic 35.0%
TTCATTAATAGTGAACAGCC+TGG - chr7_2:65885908-65885927 Msa1070020:CDS 35.0%
CAAGTATGAAGAAAAACACC+AGG + chr7_2:65885929-65885948 None:intergenic 35.0%
TCAACAGCCATTAGCATATA+AGG + chr7_2:65885979-65885998 None:intergenic 35.0%
ATGTTTAGATCACTTTGCAC+TGG + chr7_2:65886090-65886109 None:intergenic 35.0%
CAACATGATTGTTACCTCAT+AGG + chr7_2:65886304-65886323 None:intergenic 35.0%
TTTCTTAAGCAGTTTCTTCC+TGG - chr7_2:65886447-65886466 Msa1070020:intron 35.0%
AATTCCTGGACAACTTGATT+TGG + chr7_2:65886483-65886502 None:intergenic 35.0%
TCTGGAGATGAATTTCACTT+TGG - chr7_2:65886507-65886526 Msa1070020:CDS 35.0%
!! CAATGAATTAACTCTAGAGC+TGG + chr7_2:65886924-65886943 None:intergenic 35.0%
!!! TACAGAACCACTGTCATTTT+AGG + chr7_2:65887046-65887065 None:intergenic 35.0%
CTTACCCAAATGCAATACTT+TGG - chr7_2:65887074-65887093 Msa1070020:intron 35.0%
!! CAGACCAAAGTATTGCATTT+GGG + chr7_2:65887081-65887100 None:intergenic 35.0%
!! ACTTTAGAGCCACAAATGAA+TGG - chr7_2:65887322-65887341 Msa1070020:CDS 35.0%
GAATGGTAATATGCATTTGC+AGG - chr7_2:65887339-65887358 Msa1070020:CDS 35.0%
ATGGTAATATGCATTTGCAG+GGG - chr7_2:65887341-65887360 Msa1070020:CDS 35.0%
! CAGCTTTTAGATGTTTCTCA+TGG + chr7_2:65887412-65887431 None:intergenic 35.0%
AGAAACAAGATCTGAATCCA+CGG + chr7_2:65887501-65887520 None:intergenic 35.0%
!! AGATCTTGTTTCTTTTGGCA+TGG - chr7_2:65887508-65887527 Msa1070020:intron 35.0%
TTCTAATTAAGCTGAAGGAG+AGG - chr7_2:65887574-65887593 Msa1070020:intron 35.0%
!! CAGAAGTATTGAGTAATGAC+AGG - chr7_2:65887706-65887725 Msa1070020:intron 35.0%
!! TACGTAAGTATTGAAAGCAC+AGG + chr7_2:65887769-65887788 None:intergenic 35.0%
! TCAAATCTGAGATGAATCTG+AGG - chr7_2:65887843-65887862 Msa1070020:intron 35.0%
TAGCTAGACAAAAACTAGAG+TGG + chr7_2:65887881-65887900 None:intergenic 35.0%
TTCAGAGATGATGATCATGA+TGG - chr7_2:65888043-65888062 Msa1070020:intron 35.0%
TCAGAGATGATGATCATGAT+GGG - chr7_2:65888044-65888063 Msa1070020:intron 35.0%
TGACATCCAAATTTCCTCAA+TGG - chr7_2:65888123-65888142 Msa1070020:CDS 35.0%
GACATCCAAATTTCCTCAAT+GGG - chr7_2:65888124-65888143 Msa1070020:CDS 35.0%
TGAAGGTTGCTTCAGATATT+TGG - chr7_2:65888210-65888229 Msa1070020:CDS 35.0%
ACATGGCATATGTTGTATCA+AGG - chr7_2:65888332-65888351 Msa1070020:intron 35.0%
!!! CGTGTATTCTGTTTTAGTAC+TGG + chr7_2:65888440-65888459 None:intergenic 35.0%
! AGAATACACGCAGTAGTTTT+GGG - chr7_2:65888450-65888469 Msa1070020:intron 35.0%
CCTATTAATATGAGAGGATG+AGG + chr7_2:65888534-65888553 None:intergenic 35.0%
CCTCATCCTCTCATATTAAT+AGG - chr7_2:65888531-65888550 Msa1070020:intron 35.0%
CTCAACTAACCTAACAAACT+AGG - chr7_2:65888585-65888604 Msa1070020:CDS 35.0%
TGGCACTATATATCTTCTAC+TGG - chr7_2:65888687-65888706 Msa1070020:intron 35.0%
AGGTGAACCAAGAAATATGA+TGG - chr7_2:65888843-65888862 Msa1070020:CDS 35.0%
TATTGTTCAGAGATTCGAGA+GGG + chr7_2:65888989-65889008 None:intergenic 35.0%
CTGAACAATACTGAATTGGT+AGG - chr7_2:65888999-65889018 Msa1070020:intron 35.0%
GAACAATACTGAATTGGTAG+GGG - chr7_2:65889001-65889020 Msa1070020:intron 35.0%
! GTCTTGGTAATCTGAAACAT+GGG + chr7_2:65889373-65889392 None:intergenic 35.0%
!! CGAACTTGTTAAGAGTTTGA+AGG - chr7_2:65889399-65889418 Msa1070020:intron 35.0%
GTTGCACATGAAAGTTATCA+AGG + chr7_2:65889474-65889493 None:intergenic 35.0%
!! AGCATTGGTTAGTAATGTTG+AGG - chr7_2:65889536-65889555 Msa1070020:intron 35.0%
! TCTGACGAATTGTTATTGCA+TGG - chr7_2:65889565-65889584 Msa1070020:intron 35.0%
TAGCATAATAGTGGCCATTA+AGG - chr7_2:65889888-65889907 Msa1070020:intron 35.0%
CAAAACATCATCATCCTGTA+TGG + chr7_2:65889943-65889962 None:intergenic 35.0%
TGTTAATAACCAGTCTAGCT+TGG - chr7_2:65890001-65890020 Msa1070020:CDS 35.0%
TGATAAGAATTATGGAGGGA+CGG + chr7_2:65890062-65890081 None:intergenic 35.0%
CGCTGTTGTGATAAGAATTA+TGG + chr7_2:65890070-65890089 None:intergenic 35.0%
GATGCTTCACATAACAAAAC+TGG - chr7_2:65890149-65890168 Msa1070020:CDS 35.0%
TGATAAGAATTGTCGAGAGA+CGG + chr7_2:65890269-65890288 None:intergenic 35.0%
CCAAATCTATATGTAAGTGG+TGG + chr7_2:65890310-65890329 None:intergenic 35.0%
CCACCACTTACATATAGATT+TGG - chr7_2:65890307-65890326 Msa1070020:five_prime_UTR 35.0%
TTCAATGGTTATGAACTCTC+AGG - chr7_2:65890382-65890401 Msa1070020:intron 35.0%
TATTAACGGAGGAATTCTCT+GGG + chr7_2:65890463-65890482 None:intergenic 35.0%
TTATTAACGGAGGAATTCTC+TGG + chr7_2:65890464-65890483 None:intergenic 35.0%
GTTCATAATCCTTGAATGCT+CGG + chr7_2:65890582-65890601 None:intergenic 35.0%
TTCAAGGATTATGAACTCTC+GGG - chr7_2:65890586-65890605 Msa1070020:intron 35.0%
TAGATTCTGGACCAATCATT+CGG + chr7_2:65890760-65890779 None:intergenic 35.0%
ACACCAAGAAAACATTGGTA+AGG - chr7_2:65890784-65890803 Msa1070020:intron 35.0%
! ACTCCTTACCAATGTTTTCT+TGG + chr7_2:65890790-65890809 None:intergenic 35.0%
CATCATGAACAAAAAAGAGC+TGG - chr7_2:65890914-65890933 Msa1070020:intron 35.0%
GCTTCAAACGATATTCCAAT+GGG - chr7_2:65890950-65890969 Msa1070020:intron 35.0%
CTTCAAACGATATTCCAATG+GGG - chr7_2:65890951-65890970 Msa1070020:intron 35.0%
TTTGCAAACGTCTCTAACAT+TGG - chr7_2:65891006-65891025 Msa1070020:intron 35.0%
GTAATATTTCTTGCAGCTAG+TGG + chr7_2:65891130-65891149 None:intergenic 35.0%
GGTATTAATGTGAGATTGAG+AGG + chr7_2:65891188-65891207 None:intergenic 35.0%
AGGCTGACCAATGAAATTAT+CGG + chr7_2:65891209-65891228 None:intergenic 35.0%
ATAATTTCATTGGTCAGCCT+TGG - chr7_2:65891209-65891228 Msa1070020:intron 35.0%
! TGTGTCTGATTGACTCATAA+GGG + chr7_2:65891378-65891397 None:intergenic 35.0%
ATTCACAAAAGGGATGAGAT+AGG - chr7_2:65891664-65891683 Msa1070020:five_prime_UTR 35.0%
ATGGGTAAGCTTGAAAATTC+AGG - chr7_2:65891765-65891784 Msa1070020:five_prime_UTR 35.0%
!! GCTTGAAAATTCAGGTTGAT+AGG - chr7_2:65891773-65891792 Msa1070020:five_prime_UTR 35.0%
!! GCTCTCTCAACCGTTATTTT+CGG + chr7_2:65884500-65884519 None:intergenic 40.0%
GGGCAATTTGGGGATTATAA+TGG + chr7_2:65884580-65884599 None:intergenic 40.0%
AACCTAAGAACGAGTGTGAA+GGG + chr7_2:65884600-65884619 None:intergenic 40.0%
TAACCTAAGAACGAGTGTGA+AGG + chr7_2:65884601-65884620 None:intergenic 40.0%
GGAAAGTGGAAAACGAAGTA+AGG + chr7_2:65884648-65884667 None:intergenic 40.0%
ATTACCGGTGAAATTGTAGG+CGG + chr7_2:65884679-65884698 None:intergenic 40.0%
! GTTTTTCTTCGTATTGGGAG+TGG - chr7_2:65884785-65884804 Msa1070020:CDS 40.0%
ATGAAATAGTGTGGGTCGTA+TGG - chr7_2:65884927-65884946 Msa1070020:CDS 40.0%
! ATATGACATGTGGGTATTGC+AGG - chr7_2:65885231-65885250 Msa1070020:CDS 40.0%
TGAATGCTGAGTTCCAAGTT+CGG - chr7_2:65885453-65885472 Msa1070020:CDS 40.0%
TTCCTTAACCTTGGCTTCTA+TGG - chr7_2:65885697-65885716 Msa1070020:CDS 40.0%
!!! CTTTGCTTTTGGTGCTTGTT+AGG - chr7_2:65885865-65885884 Msa1070020:CDS 40.0%
ATGGTTCTCCAGAGCAATAT+AGG - chr7_2:65886040-65886059 Msa1070020:CDS 40.0%
CGTTTAGTCCTATATTGCTC+TGG + chr7_2:65886051-65886070 None:intergenic 40.0%
TTTAGATCACTTTGCACTGG+TGG + chr7_2:65886087-65886106 None:intergenic 40.0%
AATGGGATGCTAATCACCAA+AGG - chr7_2:65886130-65886149 Msa1070020:CDS 40.0%
ATGGGATGCTAATCACCAAA+GGG - chr7_2:65886131-65886150 Msa1070020:CDS 40.0%
TCGTGATCAAATCTGGCAAA+TGG + chr7_2:65886204-65886223 None:intergenic 40.0%
TTTGCCAGATTTGATCACGA+TGG - chr7_2:65886204-65886223 Msa1070020:CDS 40.0%
ATGTCCATCGTGATCAAATC+TGG + chr7_2:65886211-65886230 None:intergenic 40.0%
! GCCATGCCTGAAGAAATTTT+TGG - chr7_2:65886252-65886271 Msa1070020:CDS 40.0%
GCCAAAAATTTCTTCAGGCA+TGG + chr7_2:65886256-65886275 None:intergenic 40.0%
TCCAGGCCAAAAATTTCTTC+AGG + chr7_2:65886261-65886280 None:intergenic 40.0%
GCACTTCACTTAAACTATCC+AGG + chr7_2:65886278-65886297 None:intergenic 40.0%
! AAGTGAAGTGCTTTCCTATG+AGG - chr7_2:65886287-65886306 Msa1070020:intron 40.0%
! TCTTTTGTGAAACCTTTGGC+AGG - chr7_2:65886389-65886408 Msa1070020:intron 40.0%
GTTGTCCAGGAATTACTTTC+TGG - chr7_2:65886489-65886508 Msa1070020:CDS 40.0%
CATCTCCAGAAAGTAATTCC+TGG + chr7_2:65886497-65886516 None:intergenic 40.0%
ATCAACAATGCTGTTACACG+TGG - chr7_2:65886896-65886915 Msa1070020:intron 40.0%
TCAACTCTTGGTATCCAACT+TGG - chr7_2:65886958-65886977 Msa1070020:intron 40.0%
!! CCAGACCAAAGTATTGCATT+TGG + chr7_2:65887082-65887101 None:intergenic 40.0%
CCAAATGCAATACTTTGGTC+TGG - chr7_2:65887079-65887098 Msa1070020:intron 40.0%
! TCAGTGGGTTCCTAATGTTA+TGG - chr7_2:65887186-65887205 Msa1070020:intron 40.0%
!! CATGCACAGTTATTTTACCG+TGG - chr7_2:65887481-65887500 Msa1070020:intron 40.0%
TAATTAAGCTGAAGGAGAGG+TGG - chr7_2:65887577-65887596 Msa1070020:intron 40.0%
AATTAAGCTGAAGGAGAGGT+GGG - chr7_2:65887578-65887597 Msa1070020:intron 40.0%
! TTCCTTTTCTGGACTTTTGC+AGG + chr7_2:65887607-65887626 None:intergenic 40.0%
TACTTCTGTTCGAAAGAGTG+TGG + chr7_2:65887694-65887713 None:intergenic 40.0%
! TGCCTACGTTGGTAGATAAA+AGG - chr7_2:65887902-65887921 Msa1070020:intron 40.0%
! GCCTACGTTGGTAGATAAAA+GGG - chr7_2:65887903-65887922 Msa1070020:intron 40.0%
! ACCCTTTTATCTACCAACGT+AGG + chr7_2:65887907-65887926 None:intergenic 40.0%
! ACAAGCTTTTTGCTTTGTGC+AGG - chr7_2:65887975-65887994 Msa1070020:intron 40.0%
! GATGAAGAGGAGAAAGCATA+CGG - chr7_2:65888100-65888119 Msa1070020:CDS 40.0%
CTTGTCCCATTGAGGAAATT+TGG + chr7_2:65888132-65888151 None:intergenic 40.0%
CAAATTTCCTCAATGGGACA+AGG - chr7_2:65888130-65888149 Msa1070020:CDS 40.0%
AAGGCAATGAGCTTCAAAGA+AGG - chr7_2:65888149-65888168 Msa1070020:CDS 40.0%
TGGCATATGTTGTATCAAGG+AGG - chr7_2:65888335-65888354 Msa1070020:intron 40.0%
GAGGAAGTAATTAATTCCCG+AGG - chr7_2:65888354-65888373 Msa1070020:intron 40.0%
! CAGAATACACGCAGTAGTTT+TGG - chr7_2:65888449-65888468 Msa1070020:intron 40.0%
!! GAATACACGCAGTAGTTTTG+GGG - chr7_2:65888451-65888470 Msa1070020:intron 40.0%
!!! AATACACGCAGTAGTTTTGG+GGG - chr7_2:65888452-65888471 Msa1070020:intron 40.0%
TTAAGGGGAATTGGGTCTTT+GGG + chr7_2:65888494-65888513 None:intergenic 40.0%
TTTAAGGGGAATTGGGTCTT+TGG + chr7_2:65888495-65888514 None:intergenic 40.0%
!! AGGTAGTTGCCTAGTTTGTT+AGG + chr7_2:65888597-65888616 None:intergenic 40.0%
CTTGGCGAAGACTTCAATAA+AGG - chr7_2:65888823-65888842 Msa1070020:CDS 40.0%
GCTGAAGCCATCATATTTCT+TGG + chr7_2:65888853-65888872 None:intergenic 40.0%
! TGTAGTTTGCCTCCTTTCTT+GGG + chr7_2:65888904-65888923 None:intergenic 40.0%
GTATTGTTCAGAGATTCGAG+AGG + chr7_2:65888990-65889009 None:intergenic 40.0%
! CGTCTTGGTAATCTGAAACA+TGG + chr7_2:65889374-65889393 None:intergenic 40.0%
!! GGTATCATCTAAAAGCATCC+CGG - chr7_2:65889420-65889439 Msa1070020:intron 40.0%
!! ACACAGTTAAGAGTACTAGC+CGG + chr7_2:65889442-65889461 None:intergenic 40.0%
AGAAGAACTTGCATGAGCAT+TGG - chr7_2:65889521-65889540 Msa1070020:intron 40.0%
TCCAGTTTGCATATGATGCA+GGG + chr7_2:65889675-65889694 None:intergenic 40.0%
CTATTATGCTACATGAGGCA+AGG + chr7_2:65889879-65889898 None:intergenic 40.0%
TGCCTCATGTAGCATAATAG+TGG - chr7_2:65889879-65889898 Msa1070020:intron 40.0%
!! GATGATGATGTTTTGAGCAC+AGG - chr7_2:65889948-65889967 Msa1070020:CDS 40.0%
GATAAGAATTATGGAGGGAC+GGG + chr7_2:65890061-65890080 None:intergenic 40.0%
AAATGTCAGGATGATCCCAT+CGG - chr7_2:65890188-65890207 Msa1070020:CDS 40.0%
GAATCTTCATCGGATGAGAA+AGG + chr7_2:65890224-65890243 None:intergenic 40.0%
GATAAGAATTGTCGAGAGAC+GGG + chr7_2:65890268-65890287 None:intergenic 40.0%
CTCGACAATTCTTATCACAG+CGG - chr7_2:65890272-65890291 Msa1070020:five_prime_UTR 40.0%
ATCTTATCACAGCGATGATG+AGG - chr7_2:65890484-65890503 Msa1070020:intron 40.0%
CCAAATCTATATGAAAGGGG+TGG + chr7_2:65890514-65890533 None:intergenic 40.0%
CCACCCCTTTCATATAGATT+TGG - chr7_2:65890511-65890530 Msa1070020:intron 40.0%
AGAACAAAACCGAGCATTCA+AGG - chr7_2:65890570-65890589 Msa1070020:intron 40.0%
ATTTACCAGTGATAGCCTGT+TGG + chr7_2:65890711-65890730 None:intergenic 40.0%
! TCATTCGGGTTTGTCTATCT+TGG + chr7_2:65890745-65890764 None:intergenic 40.0%
GATAGACAAACCCGAATGAT+TGG - chr7_2:65890746-65890765 Msa1070020:intron 40.0%
AGATTCTGGACCAATCATTC+GGG + chr7_2:65890759-65890778 None:intergenic 40.0%
TTGGTAAGGAGTTGTTACAC+AGG - chr7_2:65890798-65890817 Msa1070020:intron 40.0%
TTACACAGGAAGTCAGATGA+TGG - chr7_2:65890812-65890831 Msa1070020:intron 40.0%
AAGAGCTGGGTTAAATTTCC+AGG - chr7_2:65890928-65890947 Msa1070020:intron 40.0%
! TTGGAATATCGTTTGAAGCC+TGG + chr7_2:65890949-65890968 None:intergenic 40.0%
GGCTTCAAACGATATTCCAA+TGG - chr7_2:65890949-65890968 Msa1070020:intron 40.0%
AACGATATTCCAATGGGGAA+TGG - chr7_2:65890956-65890975 Msa1070020:intron 40.0%
TAAAATTGGCCATTCCCCAT+TGG + chr7_2:65890968-65890987 None:intergenic 40.0%
ACGTCTCTAACATTGGATCA+AGG - chr7_2:65891013-65891032 Msa1070020:intron 40.0%
TAACATTGGATCAAGGTCAG+AGG - chr7_2:65891020-65891039 Msa1070020:intron 40.0%
TTCATGCCAGAAAACGTATC+AGG - chr7_2:65891058-65891077 Msa1070020:intron 40.0%
TCTTCAGACCAGCAAATTCA+GGG - chr7_2:65891235-65891254 Msa1070020:intron 40.0%
AGTCTATTTAGTCAGAGCCT+TGG - chr7_2:65891283-65891302 Msa1070020:intron 40.0%
AAGGGTTACCTGAACGTAAT+TGG + chr7_2:65891360-65891379 None:intergenic 40.0%
! GTGTGTCTGATTGACTCATA+AGG + chr7_2:65891379-65891398 None:intergenic 40.0%
TCTACTACTCCATAGGTTCT+GGG + chr7_2:65891418-65891437 None:intergenic 40.0%
ATCTACTACTCCATAGGTTC+TGG + chr7_2:65891419-65891438 None:intergenic 40.0%
TAGTAGATGCAGGTACACAT+AGG - chr7_2:65891431-65891450 Msa1070020:intron 40.0%
! TGATCTAGTGGATGAGAAGA+TGG + chr7_2:65891475-65891494 None:intergenic 40.0%
CATCCACTAGATCATTTCAG+TGG - chr7_2:65891481-65891500 Msa1070020:intron 40.0%
CTCATCCATGTCATATCATC+AGG + chr7_2:65891532-65891551 None:intergenic 40.0%
ACTGGAGCAAGATTCACAAA+AGG - chr7_2:65891653-65891672 Msa1070020:five_prime_UTR 40.0%
CTGGAGCAAGATTCACAAAA+GGG - chr7_2:65891654-65891673 Msa1070020:five_prime_UTR 40.0%
!! ACATGGTGTTAAGTTGAGCA+TGG + chr7_2:65891708-65891727 None:intergenic 40.0%
TGTGTTGGAAAGAGAAAGCA+TGG - chr7_2:65891746-65891765 Msa1070020:five_prime_UTR 40.0%
! GTGTTGGAAAGAGAAAGCAT+GGG - chr7_2:65891747-65891766 Msa1070020:five_prime_UTR 40.0%
AGGTATCAAATGCTGAAAGC+AGG - chr7_2:65891870-65891889 Msa1070020:five_prime_UTR 40.0%
AGAGAGAGAGAGTGAGTATG+TGG + chr7_2:65884527-65884546 None:intergenic 45.0%
ACGAGTGTGAAGGGCAATTT+GGG + chr7_2:65884591-65884610 None:intergenic 45.0%
AACGAGTGTGAAGGGCAATT+TGG + chr7_2:65884592-65884611 None:intergenic 45.0%
GTAAGGAATGAGATTGAGCG+AGG + chr7_2:65884631-65884650 None:intergenic 45.0%
! ACAAAACTCACCGCATTGAC+AGG + chr7_2:65884753-65884772 None:intergenic 45.0%
AAATAGTGTGGGTCGTATGG+CGG - chr7_2:65884930-65884949 Msa1070020:CDS 45.0%
CACCATAGAAGCCAAGGTTA+AGG + chr7_2:65885702-65885721 None:intergenic 45.0%
CCAATTCACCATAGAAGCCA+AGG + chr7_2:65885708-65885727 None:intergenic 45.0%
CCTTGGCTTCTATGGTGAAT+TGG - chr7_2:65885705-65885724 Msa1070020:CDS 45.0%
GCAATTAAATGGTGCAAGCC+TGG - chr7_2:65886011-65886030 Msa1070020:CDS 45.0%
CTGGAGAACCATAACTAACC+AGG + chr7_2:65886032-65886051 None:intergenic 45.0%
TCACGATGGACATGAAGTCT+TGG - chr7_2:65886218-65886237 Msa1070020:CDS 45.0%
!!! GCCTGAAGAAATTTTTGGCC+TGG - chr7_2:65886257-65886276 Msa1070020:CDS 45.0%
TGTGAAACCTTTGGCAGGTT+TGG - chr7_2:65886394-65886413 Msa1070020:intron 45.0%
GTGTATTCCAAACCTGCCAA+AGG + chr7_2:65886404-65886423 None:intergenic 45.0%
!! TGATTTGGCTCTAAGTCACC+AGG + chr7_2:65886468-65886487 None:intergenic 45.0%
! AGAGCCAAATCAAGTTGTCC+AGG - chr7_2:65886476-65886495 Msa1070020:CDS 45.0%
AGTGGAGTCACATGCTAACA+AGG + chr7_2:65886586-65886605 None:intergenic 45.0%
CAATGTGAGTCTAGCCAAGT+TGG + chr7_2:65886975-65886994 None:intergenic 45.0%
GGACATGCCTAAAATGACAG+TGG - chr7_2:65887036-65887055 Msa1070020:intron 45.0%
GACCTGCAAAAGTCCAGAAA+AGG - chr7_2:65887602-65887621 Msa1070020:intron 45.0%
TGTCTAGCTAATGCCTACGT+TGG - chr7_2:65887891-65887910 Msa1070020:intron 45.0%
GGGAATGTTACAGTGACATC+CGG - chr7_2:65888064-65888083 Msa1070020:CDS 45.0%
GGAATGTTACAGTGACATCC+GGG - chr7_2:65888065-65888084 Msa1070020:CDS 45.0%
TTCATCCCAGGAATATGACC+CGG + chr7_2:65888086-65888105 None:intergenic 45.0%
GTCATATTCCTGGGATGAAG+AGG - chr7_2:65888087-65888106 Msa1070020:CDS 45.0%
AACATTCTGCGTCAGAAGTG+AGG + chr7_2:65888617-65888636 None:intergenic 45.0%
ATGGATGTCTTGCTTAGCTG+TGG - chr7_2:65888710-65888729 Msa1070020:intron 45.0%
! ATGATGTTTGACAGGGTGCT+TGG - chr7_2:65888805-65888824 Msa1070020:CDS 45.0%
! GTGTAGTTTGCCTCCTTTCT+TGG + chr7_2:65888905-65888924 None:intergenic 45.0%
GAAAGGAGGCAAACTACACA+AGG - chr7_2:65888906-65888925 Msa1070020:intron 45.0%
!! CACAGTTAAGAGTACTAGCC+GGG + chr7_2:65889441-65889460 None:intergenic 45.0%
TCCCTGCATCATATGCAAAC+TGG - chr7_2:65889671-65889690 Msa1070020:intron 45.0%
GTCCAGTTTGCATATGATGC+AGG + chr7_2:65889676-65889695 None:intergenic 45.0%
ATGTATGCAAGCTCACTGCT+AGG + chr7_2:65889810-65889829 None:intergenic 45.0%
GGCCACTATTATGCTACATG+AGG + chr7_2:65889884-65889903 None:intergenic 45.0%
CTTCATCTTCCAAGCTAGAC+TGG + chr7_2:65890013-65890032 None:intergenic 45.0%
CCAAATCTATATCCAAGCGG+TGG + chr7_2:65890103-65890122 None:intergenic 45.0%
CCACCGCTTGGATATAGATT+TGG - chr7_2:65890100-65890119 Msa1070020:CDS 45.0%
AACTCTCGGGATGATTCCAT+CGG - chr7_2:65890599-65890618 Msa1070020:intron 45.0%
ATCGGTGAAGGATCATCTGA+GGG - chr7_2:65890617-65890636 Msa1070020:intron 45.0%
! AAGTCAGATGATGGTCCCTT+CGG - chr7_2:65890821-65890840 Msa1070020:intron 45.0%
!! TGGCTTTGGTAAGAACCGAA+GGG + chr7_2:65890839-65890858 None:intergenic 45.0%
TACCAAAGCCAGGAGCAAAT+TGG - chr7_2:65890848-65890867 Msa1070020:intron 45.0%
! GAATCAAGCCAATTTGCTCC+TGG + chr7_2:65890859-65890878 None:intergenic 45.0%
CTTGATTCAGTCCCTCATCA+AGG - chr7_2:65890871-65890890 Msa1070020:intron 45.0%
AATCCCGTTGTCCTTGATGA+GGG + chr7_2:65890885-65890904 None:intergenic 45.0%
CAGGAAGTTACTTAATCCCC+AGG - chr7_2:65891098-65891117 Msa1070020:intron 45.0%
CTCTTCAGACCAGCAAATTC+AGG - chr7_2:65891234-65891253 Msa1070020:intron 45.0%
ATTTAGTCAGAGCCTTGGCA+CGG - chr7_2:65891288-65891307 Msa1070020:intron 45.0%
ACCTATGGAGTAGTAGATGC+AGG - chr7_2:65891421-65891440 Msa1070020:intron 45.0%
ACCTGCATCTACTACTCCAT+AGG + chr7_2:65891425-65891444 None:intergenic 45.0%
! TCTAGTGGATGAGAAGATGG+TGG + chr7_2:65891472-65891491 None:intergenic 45.0%
CGTCCACTGAAATGATCTAG+TGG + chr7_2:65891487-65891506 None:intergenic 45.0%
TGGTGCCTGATGATATGACA+TGG - chr7_2:65891524-65891543 Msa1070020:intron 45.0%
TAGGATCATACTTGAGGTCG+TGG - chr7_2:65891587-65891606 Msa1070020:five_prime_UTR 45.0%
!!! AAATTATATTGTTTTAATTT+TGG + chr7_2:65884273-65884292 None:intergenic 5.0%
!! ATCATAATTAAATAAATATT+TGG + chr7_2:65884317-65884336 None:intergenic 5.0%
!!! TTTTTTAATATTTTATCTTT+AGG - chr7_2:65884716-65884735 Msa1070020:CDS 5.0%
!!! TTTTTAATATTTTATCTTTA+GGG - chr7_2:65884717-65884736 Msa1070020:CDS 5.0%
!!! TTTAATATTGTTTTTTTATT+TGG - chr7_2:65884899-65884918 Msa1070020:CDS 5.0%
!! AAAATTATAATTTGAATATT+TGG - chr7_2:65884957-65884976 Msa1070020:CDS 5.0%
CTCAGCTCCACACTTTCCTA+GGG + chr7_2:65884442-65884461 None:intergenic 50.0%
CGAGTGTGAAGGGCAATTTG+GGG + chr7_2:65884590-65884609 None:intergenic 50.0%
TGCCCTTCACACTCGTTCTT+AGG - chr7_2:65884595-65884614 Msa1070020:exon 50.0%
AAATTGTAGGCGGTGGTGAG+GGG + chr7_2:65884669-65884688 None:intergenic 50.0%
GAAATTGTAGGCGGTGGTGA+GGG + chr7_2:65884670-65884689 None:intergenic 50.0%
TGAAATTGTAGGCGGTGGTG+AGG + chr7_2:65884671-65884690 None:intergenic 50.0%
ACCACCGCCTACAATTTCAC+CGG - chr7_2:65884672-65884691 Msa1070020:CDS 50.0%
GACTGCATGGTGAAGTTGAG+AGG - chr7_2:65884979-65884998 Msa1070020:CDS 50.0%
AGAGCAAACTGCACCGAACT+TGG + chr7_2:65885469-65885488 None:intergenic 50.0%
!! AAGTTCGGTGCAGTTTGCTC+TGG - chr7_2:65885468-65885487 Msa1070020:CDS 50.0%
! GGTGCAAGCCTGGTTAGTTA+TGG - chr7_2:65886021-65886040 Msa1070020:CDS 50.0%
ACCAAAGGGTTGTTGCCAAG+CGG - chr7_2:65886145-65886164 Msa1070020:CDS 50.0%
GGGAACAGATTGGCATCAGT+TGG - chr7_2:65886166-65886185 Msa1070020:CDS 50.0%
!! CAGGGGTGCTTCACTTTGTT+CGG - chr7_2:65887358-65887377 Msa1070020:CDS 50.0%
!! AGGGGTGCTTCACTTTGTTC+GGG - chr7_2:65887359-65887378 Msa1070020:CDS 50.0%
TGACATCCGGGTCATATTCC+TGG - chr7_2:65888077-65888096 Msa1070020:CDS 50.0%
GACATCCGGGTCATATTCCT+GGG - chr7_2:65888078-65888097 Msa1070020:CDS 50.0%
TGCTTTCTCCTCTTCATCCC+AGG + chr7_2:65888098-65888117 None:intergenic 50.0%
CTCATTGCCTTGTCCCATTG+AGG + chr7_2:65888140-65888159 None:intergenic 50.0%
ATCGCTGCTGCACTTGATAC+TGG - chr7_2:65888177-65888196 Msa1070020:CDS 50.0%
TCGCTGCTGCACTTGATACT+GGG - chr7_2:65888178-65888197 Msa1070020:CDS 50.0%
! ATACTGGGCGGCTTTAGTGA+AGG - chr7_2:65888193-65888212 Msa1070020:CDS 50.0%
! AATTGGGTCTTTGGGAAGGG+AGG + chr7_2:65888486-65888505 None:intergenic 50.0%
! GGGAATTGGGTCTTTGGGAA+GGG + chr7_2:65888489-65888508 None:intergenic 50.0%
TGTCTTGCTTAGCTGTGGTC+TGG - chr7_2:65888715-65888734 Msa1070020:intron 50.0%
AACAAGTTCGTGCTGCGTCT+TGG + chr7_2:65889389-65889408 None:intergenic 50.0%
!! TGTTTTGAGCACAGGAGTCC+AGG - chr7_2:65889956-65889975 Msa1070020:CDS 50.0%
!! GTTCTCTGGGACGCTAACAA+TGG + chr7_2:65890039-65890058 None:intergenic 50.0%
AAAGGAGCTCCTTCACCGAT+GGG + chr7_2:65890206-65890225 None:intergenic 50.0%
TCAGGATGATCCCATCAGTG+AGG - chr7_2:65890400-65890419 Msa1070020:intron 50.0%
CAGGATGATCCCATCAGTGA+GGG - chr7_2:65890401-65890420 Msa1070020:intron 50.0%
AGGATGATCCCATCAGTGAG+GGG - chr7_2:65890402-65890421 Msa1070020:intron 50.0%
CTCAGATGATCCTTCACCGA+TGG + chr7_2:65890618-65890637 None:intergenic 50.0%
CATCGGTGAAGGATCATCTG+AGG - chr7_2:65890616-65890635 Msa1070020:intron 50.0%
GATCATCTGAGGGTCATGCA+TGG - chr7_2:65890627-65890646 Msa1070020:intron 50.0%
CCTGTTGGCAGTGTAGTCAT+GGG + chr7_2:65890696-65890715 None:intergenic 50.0%
!! CTGGCTTTGGTAAGAACCGA+AGG + chr7_2:65890840-65890859 None:intergenic 50.0%
CTTCGGTTCTTACCAAAGCC+AGG - chr7_2:65890838-65890857 Msa1070020:intron 50.0%
! AGCCAATTTGCTCCTGGCTT+TGG + chr7_2:65890853-65890872 None:intergenic 50.0%
CAGTCCCTCATCAAGGACAA+CGG - chr7_2:65890878-65890897 Msa1070020:intron 50.0%
AGTCCCTCATCAAGGACAAC+GGG - chr7_2:65890879-65890898 Msa1070020:intron 50.0%
CAATCCCGTTGTCCTTGATG+AGG + chr7_2:65890886-65890905 None:intergenic 50.0%
CTCATCAAGGACAACGGGAT+TGG - chr7_2:65890884-65890903 Msa1070020:intron 50.0%
! TGCTGGTCTGAAGAGAACCA+AGG + chr7_2:65891229-65891248 None:intergenic 50.0%
! CAAATTCAGGGTGCCTGGAA+TGG - chr7_2:65891247-65891266 Msa1070020:intron 50.0%
TTTAGTCAGAGCCTTGGCAC+GGG - chr7_2:65891289-65891308 Msa1070020:intron 50.0%
TTCCTTTCGCCCAGAACCTA+TGG - chr7_2:65891406-65891425 Msa1070020:intron 50.0%
CATACTTGAGGTCGTGGAAC+CGG - chr7_2:65891593-65891612 Msa1070020:five_prime_UTR 50.0%
ACTTGTGGACAGCTAGCCCT+AGG - chr7_2:65884423-65884442 Msa1070020:three_prime_UTR 55.0%
CAGCTAGCCCTAGGAAAGTG+TGG - chr7_2:65884432-65884451 Msa1070020:three_prime_UTR 55.0%
GCTCAGCTCCACACTTTCCT+AGG + chr7_2:65884443-65884462 None:intergenic 55.0%
ACCGGTGAAATTGTAGGCGG+TGG + chr7_2:65884676-65884695 None:intergenic 55.0%
!! CGGTGCAGTTTGCTCTGGAA+TGG - chr7_2:65885473-65885492 Msa1070020:CDS 55.0%
CCAAAGGGTTGTTGCCAAGC+GGG - chr7_2:65886146-65886165 Msa1070020:CDS 55.0%
GTTGCCAAGCGGGAACAGAT+TGG - chr7_2:65886156-65886175 Msa1070020:CDS 55.0%
GATGCCAATCTGTTCCCGCT+TGG + chr7_2:65886163-65886182 None:intergenic 55.0%
CTGCTGCACTTGATACTGGG+CGG - chr7_2:65888181-65888200 Msa1070020:CDS 55.0%
! GGGGAATTGGGTCTTTGGGA+AGG + chr7_2:65888490-65888509 None:intergenic 55.0%
GTGGGAGGAAGACCCAAGAA+AGG - chr7_2:65888889-65888908 Msa1070020:intron 55.0%
GGAGGAAGACCCAAGAAAGG+AGG - chr7_2:65888892-65888911 Msa1070020:intron 55.0%
! TATGGAGGGACGGGTTCTCT+GGG + chr7_2:65890052-65890071 None:intergenic 55.0%
! TTATGGAGGGACGGGTTCTC+TGG + chr7_2:65890053-65890072 None:intergenic 55.0%
CAGGATGATCCCATCGGTGA+AGG - chr7_2:65890194-65890213 Msa1070020:CDS 55.0%
GAAAGGAGCTCCTTCACCGA+TGG + chr7_2:65890207-65890226 None:intergenic 55.0%
! TGTCGAGAGACGGGTTCTGT+TGG + chr7_2:65890259-65890278 None:intergenic 55.0%
GGATGATCCCATCAGTGAGG+GGG - chr7_2:65890403-65890422 Msa1070020:intron 55.0%
CGGGATGATTCCATCGGTGA+AGG - chr7_2:65890605-65890624 Msa1070020:intron 55.0%
CCCATGACTACACTGCCAAC+AGG - chr7_2:65890693-65890712 Msa1070020:intron 55.0%
GCCTGTTGGCAGTGTAGTCA+TGG + chr7_2:65890697-65890716 None:intergenic 55.0%
CACTGCCAACAGGCTATCAC+TGG - chr7_2:65890703-65890722 Msa1070020:intron 55.0%
GATCAAGGTCAGAGGCAAGC+TGG - chr7_2:65891028-65891047 Msa1070020:intron 55.0%
! CAGCTAGTGGATCTTGCCTG+GGG + chr7_2:65891117-65891136 None:intergenic 55.0%
! GCAGCTAGTGGATCTTGCCT+GGG + chr7_2:65891118-65891137 None:intergenic 55.0%
! TGCAGCTAGTGGATCTTGCC+TGG + chr7_2:65891119-65891138 None:intergenic 55.0%
! ACCAGCAAATTCAGGGTGCC+TGG - chr7_2:65891242-65891261 Msa1070020:intron 55.0%
TCCAGGCACCCTGAATTTGC+TGG + chr7_2:65891246-65891265 None:intergenic 55.0%
GCCTGGAATGGATCTGGCAA+TGG - chr7_2:65891259-65891278 Msa1070020:intron 55.0%
GCCATTGCCAGATCCATTCC+AGG + chr7_2:65891263-65891282 None:intergenic 55.0%
!! AGGTTCTGGGCGAAAGGAAC+TGG + chr7_2:65891405-65891424 None:intergenic 55.0%
!! CTCCATAGGTTCTGGGCGAA+AGG + chr7_2:65891411-65891430 None:intergenic 55.0%
TTCAGTGGACGTGATGCACC+TGG - chr7_2:65891496-65891515 Msa1070020:intron 55.0%
GAGCTGAGCCGAGAGCAAGT+TGG - chr7_2:65884454-65884473 Msa1070020:three_prime_UTR 60.0%
! CCTTCGCGCCAACTTGCTCT+CGG + chr7_2:65884465-65884484 None:intergenic 60.0%
CCCGCTTGGCAACAACCCTT+TGG + chr7_2:65886149-65886168 None:intergenic 60.0%
ACCACCATGCTCCTCCTCCT+GGG + chr7_2:65889982-65890001 None:intergenic 60.0%
AAAGGGGCCCCCTCACTGAT+GGG + chr7_2:65890413-65890432 None:intergenic 60.0%
!! AGAGGGTGCTACCATGCGAG+GGG + chr7_2:65891170-65891189 None:intergenic 60.0%
!! GAGAGGGTGCTACCATGCGA+GGG + chr7_2:65891171-65891190 None:intergenic 60.0%
!! TGAGAGGGTGCTACCATGCG+AGG + chr7_2:65891172-65891191 None:intergenic 60.0%
! CAGGGTGCCTGGAATGGATC+TGG - chr7_2:65891253-65891272 Msa1070020:intron 60.0%
ACGTGATGCACCTGGTGCTC+TGG - chr7_2:65891504-65891523 Msa1070020:intron 60.0%
! TCATCAGGCACCAGAGCACC+AGG + chr7_2:65891517-65891536 None:intergenic 60.0%
! CCGAGAGCAAGTTGGCGCGA+AGG - chr7_2:65884462-65884481 Msa1070020:three_prime_UTR 65.0%
AGGCGGTGGTGAGGGGAAAG+TGG + chr7_2:65884662-65884681 None:intergenic 65.0%
CACCACCATGCTCCTCCTCC+TGG + chr7_2:65889983-65890002 None:intergenic 65.0%
CGATGACGAGCTCCACCGCT+TGG - chr7_2:65890088-65890107 Msa1070020:CDS 65.0%
GAAAGGGGCCCCCTCACTGA+TGG + chr7_2:65890414-65890433 None:intergenic 65.0%
GGCTGTTAGTGCCCCTCGCA+TGG - chr7_2:65891156-65891175 Msa1070020:intron 65.0%
AGTCAGAGCCTTGGCACGGG+AGG - chr7_2:65891292-65891311 Msa1070020:intron 65.0%
GGGAGTTTCCTCCCGTGCCA+AGG + chr7_2:65891303-65891322 None:intergenic 65.0%
GAGCACAGGAGTCCAGGCCC+AGG - chr7_2:65889962-65889981 Msa1070020:CDS 70.0%
CACAGGAGTCCAGGCCCAGG+AGG - chr7_2:65889965-65889984 Msa1070020:CDS 70.0%
AGGAGTCCAGGCCCAGGAGG+AGG - chr7_2:65889968-65889987 Msa1070020:CDS 70.0%
CATGCTCCTCCTCCTGGGCC+TGG + chr7_2:65889977-65889996 None:intergenic 70.0%
CAGGCCCAGGAGGAGGAGCA+TGG - chr7_2:65889975-65889994 Msa1070020:CDS 70.0%
! GCCCAGGAGGAGGAGCATGG+TGG - chr7_2:65889978-65889997 Msa1070020:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 65884249 65891982 65884249 ID=Msa1070020;Name=Msa1070020
chr7_2 mRNA 65884249 65891982 65884249 ID=Msa1070020-mRNA-1;Parent=Msa1070020;Name=Msa1070020-mRNA-1;_AED=0.06;_eAED=0.06;_QI=540|1|1|1|0.88|0.8|10|364|983
chr7_2 exon 65884249 65886283 65884249 ID=Msa1070020-mRNA-1:exon:14063;Parent=Msa1070020-mRNA-1
chr7_2 exon 65886457 65886583 65886457 ID=Msa1070020-mRNA-1:exon:14062;Parent=Msa1070020-mRNA-1
chr7_2 exon 65886689 65886849 65886689 ID=Msa1070020-mRNA-1:exon:14061;Parent=Msa1070020-mRNA-1
chr7_2 exon 65887256 65887412 65887256 ID=Msa1070020-mRNA-1:exon:14060;Parent=Msa1070020-mRNA-1
chr7_2 exon 65888061 65888234 65888061 ID=Msa1070020-mRNA-1:exon:14059;Parent=Msa1070020-mRNA-1
chr7_2 exon 65888585 65888668 65888585 ID=Msa1070020-mRNA-1:exon:14058;Parent=Msa1070020-mRNA-1
chr7_2 exon 65888757 65888870 65888757 ID=Msa1070020-mRNA-1:exon:14057;Parent=Msa1070020-mRNA-1
chr7_2 exon 65889684 65889820 65889684 ID=Msa1070020-mRNA-1:exon:14056;Parent=Msa1070020-mRNA-1
chr7_2 exon 65889923 65890344 65889923 ID=Msa1070020-mRNA-1:exon:14055;Parent=Msa1070020-mRNA-1
chr7_2 exon 65891538 65891982 65891538 ID=Msa1070020-mRNA-1:exon:14054;Parent=Msa1070020-mRNA-1
chr7_2 five_prime_UTR 65891538 65891982 65891538 ID=Msa1070020-mRNA-1:five_prime_utr;Parent=Msa1070020-mRNA-1
chr7_2 five_prime_UTR 65890250 65890344 65890250 ID=Msa1070020-mRNA-1:five_prime_utr;Parent=Msa1070020-mRNA-1
chr7_2 CDS 65889923 65890249 65889923 ID=Msa1070020-mRNA-1:cds;Parent=Msa1070020-mRNA-1
chr7_2 CDS 65889684 65889820 65889684 ID=Msa1070020-mRNA-1:cds;Parent=Msa1070020-mRNA-1
chr7_2 CDS 65888757 65888870 65888757 ID=Msa1070020-mRNA-1:cds;Parent=Msa1070020-mRNA-1
chr7_2 CDS 65888585 65888668 65888585 ID=Msa1070020-mRNA-1:cds;Parent=Msa1070020-mRNA-1
chr7_2 CDS 65888061 65888234 65888061 ID=Msa1070020-mRNA-1:cds;Parent=Msa1070020-mRNA-1
chr7_2 CDS 65887256 65887412 65887256 ID=Msa1070020-mRNA-1:cds;Parent=Msa1070020-mRNA-1
chr7_2 CDS 65886689 65886849 65886689 ID=Msa1070020-mRNA-1:cds;Parent=Msa1070020-mRNA-1
chr7_2 CDS 65886457 65886583 65886457 ID=Msa1070020-mRNA-1:cds;Parent=Msa1070020-mRNA-1
chr7_2 CDS 65884613 65886283 65884613 ID=Msa1070020-mRNA-1:cds;Parent=Msa1070020-mRNA-1
chr7_2 three_prime_UTR 65884249 65884612 65884249 ID=Msa1070020-mRNA-1:three_prime_utr;Parent=Msa1070020-mRNA-1
Gene Sequence

>Msa1070020

ATGCTAATGGCTGTTGATCAAAGAAGAAAGCAATTAAATGGTGCAAGCCTGGTTAGTTATGGTTCTCCAGAGCAATATAGGACTAAACGAAAGAATTTTGGACCACCAGTGCAAAGTGATCTAAACATGAAATCTCACATTTCTGTTGAATGGGATGCTAATCACCAAAGGGTTGTTGCCAAGCGGGAACAGATTGGCATCAGTTGGAGACAAACGAGACCATTTGCCAGATTTGATCACGATGGACATGAAGTCTTGGCAGATGTGCTTGCCATGCCTGAAGAAATTTTTGGCCTGGATAGTTTAAGTGAAGTGCTTTCCTATGAGGTTTGGAATACACAGCTTTCAGACAATGAGAGAAATTTTCTTAAGCAGTTTCTTCCTGGTGACTTAGAGCCAAATCAAGTTGTCCAGGAATTACTTTCTGGAGATGAATTTCACTTTGGAAACCCTTTCTTAAAATGGGGTGCTTCACTTTGTTCGGGCGATCTTCATCCAGATATGATTGTTTACCATGAGAAACATCTAAAAGCTGATAGAAGAGCATACTTCTCACAATTACGTAAATATCATAAGGATATGATTGGATTTCTAATTAAGCTGAAGGAGAGGTGGGAGACCTGCAAAAGTCCAGAAAAGGAAATTCTACCAAATATTCTGAGGTCAAAGAATGATATAAAGAAAAGAAAATGGTCAAACTTGGATGAATTCAGAGATGATGATCATGATGGGAATGTTACAGTGACATCCGGGTCATATTCCTGGGATGAAGAGGAGAAAGCATACGGTGACATCCAAATTTCCTCAATGGGACAAGGCAATGAGCTTCAAAGAAGGGTGCTTGGCGAAGACTTCAATAAAGGTGAACCAAGAAATATGATGGCTTCAGCTTTTATGCTTAATAATGTGGGAGGAAGACCCAAGAAAGGAGGCAAACTACACAAGGATAACATTCATGCTAATGACGGTGACCAATATATGTCATATATCAAGATTACCAAGACGCAGCACGAACTTGTTAAGAGTTTGAAGGTATCATCTAAAAGCATCCCGGCTAGTACTCTTAACTGTGTTTTGGGTGACCTTGATAACTTTCATGTGCAACCGTTCAAATTATTTATCAAAGAAGAACAGAAGAACTTGCATGAGCATTGGTTACAATTGGTGAAGAAACATCTCCCTGCATCATATGCAAACTGGACAGAGAGACTGATACAGAAACATGCAATGAGAAATTCTTTGTTGCTTGAAATGAAAGATAAATCAAATGTACTGGTAGAGGATGATGATGTTTTGAGCACAGGAGTCCAGGCCCAGGAGGAGGAGCATGGTGGTGTTAATAACCAGTCTAGCTTGGAAGATGAAGATTCCATTGTTAGCGTCCCAGAGAACCCGTCCCTCCATAATTCTTATCACAACAGCGATGACGAGCTCCACCGCTTGGATATAGATTTGGTAAAAGATGTTTTATCAAAAGGAGATGATGCTTCACATAACAAAACTGGAGATTCAACGATTATGAAATGTCAGGATGATCCCATCGGTGAAGGAGCTCCTTTCTCATCCGATGAAGATTCTTTTGTTAGATTCCAACAGAACCCGTCTCTCGACAATTCTTATCACAGCGGCGATGACGAGCTCCACCACTTACATATAGATTTGGAGAAAAATATTTTATCAAAAGGAGGCGACTCTTCACAGTACACAATTGAACATTCAATGGTTATGAACTCTCAGGATGATCCCATCAGTGAGGGGGCCCCTTTCTCGTATAATGATACTGTTGATAGATTCCCAGAGAATTCCTCCGTTAATAAATCTTATCACAGCGATGATGAGGAGCTCCACCCCTTTCATATAGATTTGGAAAAAAATATTTTATCAAAAGGAGATGATGCTTCGCAGAACAAAACCGAGCATTCAAGGATTATGAACTCTCGGGATGATTCCATCGGTGAAGGATCATCTGAGGGTCATGCATGGCAAGCAGTTGAAATGTCGCACCCTTACTATGATTTAAGTATGACCCATGACTACACTGCCAACAGGCTATCACTGGTAAATTCACAAATTAACCAAGATAGACAAACCCGAATGATTGGTCCAGAATCTAATTTACACCAAGAAAACATTGGTAAGGAGTTGTTACACAGGAAGTCAGATGATGGTCCCTTCGGTTCTTACCAAAGCCAGGAGCAAATTGGCTTGATTCAGTCCCTCATCAAGGACAACGGGATTGGCTCCTATCATCATGAACAAAAAAGAGCTGGGTTAAATTTCCAGGCTTCAAACGATATTCCAATGGGGAATGGCCAATTTTATAGTCATTTTAAGGAGTCTTTGCAAACGTCTCTAACATTGGATCAAGGTCAGAGGCAAGCTGGTAATATTTTCATGCCAGAAAACGTATCAGGTAATATTTATTCTGACACAGGAAGTTACTTAATCCCCAGGCAAGATCCACTAGCTGCAAGAAATATTACTGATTGGGCTGTTAGTGCCCCTCGCATGGTAGCACCCTCTCAATCTCACATTAATACCGATAATTTCATTGGTCAGCCTTGGTTCTCTTCAGACCAGCAAATTCAGGGTGCCTGGAATGGATCTGGCAATGGCAGTCTATTTAGTCAGAGCCTTGGCACGGGAGGAAACTCCCATCATAACTTATTTAGTGTTCTATCTCAATATAACCAATTACGTTCAGGTAACCCTTATGAGTCAATCAGACACACTGACCAGTTCCTTTCGCCCAGAACCTATGGAGTAGTAGATGCAGGTACACATAGGATCAATGCTGTTGTACCACCATCTTCTCATCCACTAGATCATTTCAGTGGACGTGATGCACCTGGTGCTCTGGTGCCTGATGATATGACATGGATGAGCTTGCCTCCTCAAAATCCTACTTTAAATGATCAAATAGGATCATACTTGAGGTCGTGGAACCGGTAA
Protein sequence

>Msa1070020

MLMAVDQRRKQLNGASLVSYGSPEQYRTKRKNFGPPVQSDLNMKSHISVEWDANHQRVVAKREQIGISWRQTRPFARFDHDGHEVLADVLAMPEEIFGLDSLSEVLSYEVWNTQLSDNERNFLKQFLPGDLEPNQVVQELLSGDEFHFGNPFLKWGASLCSGDLHPDMIVYHEKHLKADRRAYFSQLRKYHKDMIGFLIKLKERWETCKSPEKEILPNILRSKNDIKKRKWSNLDEFRDDDHDGNVTVTSGSYSWDEEEKAYGDIQISSMGQGNELQRRVLGEDFNKGEPRNMMASAFMLNNVGGRPKKGGKLHKDNIHANDGDQYMSYIKITKTQHELVKSLKVSSKSIPASTLNCVLGDLDNFHVQPFKLFIKEEQKNLHEHWLQLVKKHLPASYANWTERLIQKHAMRNSLLLEMKDKSNVLVEDDDVLSTGVQAQEEEHGGVNNQSSLEDEDSIVSVPENPSLHNSYHNSDDELHRLDIDLVKDVLSKGDDASHNKTGDSTIMKCQDDPIGEGAPFSSDEDSFVRFQQNPSLDNSYHSGDDELHHLHIDLEKNILSKGGDSSQYTIEHSMVMNSQDDPISEGAPFSYNDTVDRFPENSSVNKSYHSDDEELHPFHIDLEKNILSKGDDASQNKTEHSRIMNSRDDSIGEGSSEGHAWQAVEMSHPYYDLSMTHDYTANRLSLVNSQINQDRQTRMIGPESNLHQENIGKELLHRKSDDGPFGSYQSQEQIGLIQSLIKDNGIGSYHHEQKRAGLNFQASNDIPMGNGQFYSHFKESLQTSLTLDQGQRQAGNIFMPENVSGNIYSDTGSYLIPRQDPLAARNITDWAVSAPRMVAPSQSHINTDNFIGQPWFSSDQQIQGAWNGSGNGSLFSQSLGTGGNSHHNLFSVLSQYNQLRSGNPYESIRHTDQFLSPRTYGVVDAGTHRINAVVPPSSHPLDHFSGRDAPGALVPDDMTWMSLPPQNPTLNDQIGSYLRSWNR*