Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0864550 | XP_003617896.1 | 94.118 | 238 | 14 | 0 | 1 | 238 | 1 | 238 | 2.11e-165 | 466 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0864550 | G7K4T5 | 94.118 | 238 | 14 | 0 | 1 | 238 | 1 | 238 | 1.01e-165 | 466 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002110 | Msa0864550 | -0.824555 | 7.574279e-54 | -8.615850e-47 |
Msa0007810 | Msa0864550 | -0.827278 | 1.708862e-54 | -8.615850e-47 |
Msa0011060 | Msa0864550 | -0.823366 | 1.439499e-53 | -8.615850e-47 |
Msa0011100 | Msa0864550 | -0.805160 | 1.526677e-49 | -8.615850e-47 |
Msa0024500 | Msa0864550 | -0.844627 | 6.725705e-59 | -8.615850e-47 |
Msa0027020 | Msa0864550 | -0.812267 | 4.620321e-51 | -8.615850e-47 |
Msa0027030 | Msa0864550 | -0.812565 | 3.977486e-51 | -8.615850e-47 |
Msa0037180 | Msa0864550 | 0.829636 | 4.606332e-55 | -8.615850e-47 |
Msa0037270 | Msa0864550 | -0.800936 | 1.140500e-48 | -8.615850e-47 |
Msa0040860 | Msa0864550 | -0.810935 | 9.000123e-51 | -8.615850e-47 |
Msa0042520 | Msa0864550 | -0.802444 | 5.595000e-49 | -8.615850e-47 |
Msa0046020 | Msa0864550 | -0.801568 | 8.467790e-49 | -8.615850e-47 |
Msa0047560 | Msa0864550 | -0.808678 | 2.752186e-50 | -8.615850e-47 |
Msa0056230 | Msa0864550 | -0.825702 | 4.057838e-54 | -8.615850e-47 |
Msa0062190 | Msa0864550 | 0.808723 | 2.691540e-50 | -8.615850e-47 |
Msa0065670 | Msa0864550 | -0.819645 | 1.041917e-52 | -8.615850e-47 |
Msa0072390 | Msa0864550 | -0.802153 | 6.421649e-49 | -8.615850e-47 |
Msa0074860 | Msa0864550 | -0.813432 | 2.567823e-51 | -8.615850e-47 |
Msa0075990 | Msa0864550 | -0.836257 | 1.040614e-56 | -8.615850e-47 |
Msa0081120 | Msa0864550 | -0.805183 | 1.509771e-49 | -8.615850e-47 |
Msa0085690 | Msa0864550 | -0.815534 | 8.798898e-52 | -8.615850e-47 |
Msa0086620 | Msa0864550 | -0.812826 | 3.487598e-51 | -8.615850e-47 |
Msa0092220 | Msa0864550 | 0.818253 | 2.158305e-52 | -8.615850e-47 |
Msa0095810 | Msa0864550 | -0.818143 | 2.285424e-52 | -8.615850e-47 |
Msa0095890 | Msa0864550 | -0.819093 | 1.391809e-52 | -8.615850e-47 |
Msa0106540 | Msa0864550 | 0.803820 | 2.904861e-49 | -8.615850e-47 |
Msa0605150 | Msa0864550 | -0.801270 | 9.745148e-49 | -8.615850e-47 |
Msa0608780 | Msa0864550 | -0.814838 | 1.256336e-51 | -8.615850e-47 |
Msa0610240 | Msa0864550 | -0.806914 | 6.527109e-50 | -8.615850e-47 |
Msa0610700 | Msa0864550 | -0.805380 | 1.372537e-49 | -8.615850e-47 |
Msa0615070 | Msa0864550 | 0.805724 | 1.162341e-49 | -8.615850e-47 |
Msa0616890 | Msa0864550 | -0.832105 | 1.142997e-55 | -8.615850e-47 |
Msa0622450 | Msa0864550 | -0.807802 | 4.230679e-50 | -8.615850e-47 |
Msa0638300 | Msa0864550 | -0.811563 | 6.577648e-51 | -8.615850e-47 |
Msa0649250 | Msa0864550 | -0.821956 | 3.064749e-53 | -8.615850e-47 |
Msa0656570 | Msa0864550 | -0.806037 | 9.994106e-50 | -8.615850e-47 |
Msa0661540 | Msa0864550 | -0.823331 | 1.467460e-53 | -8.615850e-47 |
Msa0667670 | Msa0864550 | -0.818388 | 2.012172e-52 | -8.615850e-47 |
Msa0676570 | Msa0864550 | -0.807275 | 5.473731e-50 | -8.615850e-47 |
Msa0683150 | Msa0864550 | -0.825347 | 4.925958e-54 | -8.615850e-47 |
Msa0684030 | Msa0864550 | -0.803650 | 3.150325e-49 | -8.615850e-47 |
Msa0684150 | Msa0864550 | 0.810975 | 8.822863e-51 | -8.615850e-47 |
Msa0690100 | Msa0864550 | -0.807447 | 5.033601e-50 | -8.615850e-47 |
Msa0695250 | Msa0864550 | -0.822899 | 1.849947e-53 | -8.615850e-47 |
Msa0701800 | Msa0864550 | -0.849777 | 2.601236e-60 | -8.615850e-47 |
Msa0702020 | Msa0864550 | -0.823930 | 1.062167e-53 | -8.615850e-47 |
Msa0702690 | Msa0864550 | -0.845454 | 4.021406e-59 | -8.615850e-47 |
Msa0703430 | Msa0864550 | -0.809574 | 1.769195e-50 | -8.615850e-47 |
Msa0704790 | Msa0864550 | -0.800024 | 1.749813e-48 | -8.615850e-47 |
Msa0707860 | Msa0864550 | -0.812619 | 3.871185e-51 | -8.615850e-47 |
Msa0713570 | Msa0864550 | -0.807775 | 4.287259e-50 | -8.615850e-47 |
Msa0717540 | Msa0864550 | -0.819076 | 1.403828e-52 | -8.615850e-47 |
Msa0720130 | Msa0864550 | -0.804135 | 2.498147e-49 | -8.615850e-47 |
Msa0738460 | Msa0864550 | -0.807949 | 3.937468e-50 | -8.615850e-47 |
Msa0744010 | Msa0864550 | -0.804217 | 2.401807e-49 | -8.615850e-47 |
Msa0745140 | Msa0864550 | 0.820092 | 8.231862e-53 | -8.615850e-47 |
Msa0750200 | Msa0864550 | -0.803659 | 3.137051e-49 | -8.615850e-47 |
Msa0753270 | Msa0864550 | 0.807038 | 6.143503e-50 | -8.615850e-47 |
Msa0754020 | Msa0864550 | -0.817701 | 2.876690e-52 | -8.615850e-47 |
Msa0755550 | Msa0864550 | -0.802280 | 6.046110e-49 | -8.615850e-47 |
Msa0758880 | Msa0864550 | -0.827816 | 1.269488e-54 | -8.615850e-47 |
Msa0769910 | Msa0864550 | -0.837767 | 4.280816e-57 | -8.615850e-47 |
Msa0770540 | Msa0864550 | -0.810029 | 1.412266e-50 | -8.615850e-47 |
Msa0776640 | Msa0864550 | 0.821918 | 3.127826e-53 | -8.615850e-47 |
Msa0787380 | Msa0864550 | -0.813583 | 2.378964e-51 | -8.615850e-47 |
Msa0788160 | Msa0864550 | -0.814645 | 1.386442e-51 | -8.615850e-47 |
Msa0790650 | Msa0864550 | -0.813435 | 2.563724e-51 | -8.615850e-47 |
Msa0793130 | Msa0864550 | -0.804230 | 2.387315e-49 | -8.615850e-47 |
Msa0794900 | Msa0864550 | -0.822336 | 2.501058e-53 | -8.615850e-47 |
Msa0795910 | Msa0864550 | -0.823327 | 1.470631e-53 | -8.615850e-47 |
Msa0797180 | Msa0864550 | -0.805647 | 1.206469e-49 | -8.615850e-47 |
Msa0801920 | Msa0864550 | -0.828436 | 9.001162e-55 | -8.615850e-47 |
Msa0802950 | Msa0864550 | -0.831717 | 1.425295e-55 | -8.615850e-47 |
Msa0805390 | Msa0864550 | 0.807941 | 3.952546e-50 | -8.615850e-47 |
Msa0807100 | Msa0864550 | -0.826800 | 2.223245e-54 | -8.615850e-47 |
Msa0807870 | Msa0864550 | -0.820349 | 7.190956e-53 | -8.615850e-47 |
Msa0825360 | Msa0864550 | -0.802448 | 5.583295e-49 | -8.615850e-47 |
Msa0825920 | Msa0864550 | 0.819488 | 1.131017e-52 | -8.615850e-47 |
Msa0829250 | Msa0864550 | -0.808482 | 3.031108e-50 | -8.615850e-47 |
Msa0833030 | Msa0864550 | -0.815111 | 1.092662e-51 | -8.615850e-47 |
Msa0833200 | Msa0864550 | -0.821179 | 4.632327e-53 | -8.615850e-47 |
Msa0833360 | Msa0864550 | -0.815944 | 7.132333e-52 | -8.615850e-47 |
Msa0835050 | Msa0864550 | -0.812551 | 4.005118e-51 | -8.615850e-47 |
Msa0838120 | Msa0864550 | -0.827989 | 1.153513e-54 | -8.615850e-47 |
Msa0127220 | Msa0864550 | -0.810059 | 1.391244e-50 | -8.615850e-47 |
Msa0127350 | Msa0864550 | -0.824158 | 9.394196e-54 | -8.615850e-47 |
Msa0127910 | Msa0864550 | -0.816661 | 4.928548e-52 | -8.615850e-47 |
Msa0132080 | Msa0864550 | -0.828177 | 1.039247e-54 | -8.615850e-47 |
Msa0141410 | Msa0864550 | 0.800810 | 1.209994e-48 | -8.615850e-47 |
Msa0159240 | Msa0864550 | -0.811816 | 5.795046e-51 | -8.615850e-47 |
Msa0167150 | Msa0864550 | -0.819235 | 1.291987e-52 | -8.615850e-47 |
Msa0167160 | Msa0864550 | -0.815283 | 1.001053e-51 | -8.615850e-47 |
Msa0168770 | Msa0864550 | -0.833031 | 6.733375e-56 | -8.615850e-47 |
Msa0174060 | Msa0864550 | -0.809833 | 1.555976e-50 | -8.615850e-47 |
Msa0177320 | Msa0864550 | 0.834220 | 3.400452e-56 | -8.615850e-47 |
Msa0186400 | Msa0864550 | -0.811346 | 7.332165e-51 | -8.615850e-47 |
Msa0189150 | Msa0864550 | -0.810150 | 1.330152e-50 | -8.615850e-47 |
Msa0198990 | Msa0864550 | 0.803395 | 3.558544e-49 | -8.615850e-47 |
Msa0208040 | Msa0864550 | -0.810277 | 1.248697e-50 | -8.615850e-47 |
Msa0209370 | Msa0864550 | -0.809587 | 1.757930e-50 | -8.615850e-47 |
Msa0211460 | Msa0864550 | 0.815312 | 9.859652e-52 | -8.615850e-47 |
Msa0212950 | Msa0864550 | -0.812431 | 4.254318e-51 | -8.615850e-47 |
Msa0216150 | Msa0864550 | -0.836697 | 8.040623e-57 | -8.615850e-47 |
Msa0216340 | Msa0864550 | 0.830771 | 2.434484e-55 | -8.615850e-47 |
Msa0225070 | Msa0864550 | -0.849892 | 2.415821e-60 | -8.615850e-47 |
Msa0225080 | Msa0864550 | -0.815169 | 1.060975e-51 | -8.615850e-47 |
Msa0225280 | Msa0864550 | -0.806280 | 8.881734e-50 | -8.615850e-47 |
Msa0229350 | Msa0864550 | -0.844108 | 9.270381e-59 | -8.615850e-47 |
Msa0364910 | Msa0864550 | -0.828188 | 1.032759e-54 | -8.615850e-47 |
Msa0382020 | Msa0864550 | -0.837863 | 4.044005e-57 | -8.615850e-47 |
Msa0386880 | Msa0864550 | 0.818892 | 1.546057e-52 | -8.615850e-47 |
Msa0387630 | Msa0864550 | -0.828306 | 9.675514e-55 | -8.615850e-47 |
Msa0390590 | Msa0864550 | -0.814052 | 1.875227e-51 | -8.615850e-47 |
Msa0403740 | Msa0864550 | -0.862364 | 5.339174e-64 | -8.615850e-47 |
Msa0412580 | Msa0864550 | -0.845476 | 3.967216e-59 | -8.615850e-47 |
Msa0419150 | Msa0864550 | -0.819393 | 1.189303e-52 | -8.615850e-47 |
Msa0427600 | Msa0864550 | -0.806407 | 8.350219e-50 | -8.615850e-47 |
Msa0428300 | Msa0864550 | -0.827149 | 1.834622e-54 | -8.615850e-47 |
Msa0431270 | Msa0864550 | -0.813485 | 2.499017e-51 | -8.615850e-47 |
Msa0436660 | Msa0864550 | -0.801739 | 7.810480e-49 | -8.615850e-47 |
Msa0437820 | Msa0864550 | -0.809290 | 2.035200e-50 | -8.615850e-47 |
Msa0450890 | Msa0864550 | -0.827592 | 1.436667e-54 | -8.615850e-47 |
Msa0456450 | Msa0864550 | -0.862052 | 6.655886e-64 | -8.615850e-47 |
Msa0457070 | Msa0864550 | -0.854364 | 1.293076e-61 | -8.615850e-47 |
Msa0464980 | Msa0864550 | -0.823915 | 1.071257e-53 | -8.615850e-47 |
Msa0469770 | Msa0864550 | -0.802294 | 6.005356e-49 | -8.615850e-47 |
Msa0474660 | Msa0864550 | -0.801008 | 1.102858e-48 | -8.615850e-47 |
Msa0476600 | Msa0864550 | -0.801511 | 8.699033e-49 | -8.615850e-47 |
Msa0241750 | Msa0864550 | 0.833791 | 4.353518e-56 | -8.615850e-47 |
Msa0253230 | Msa0864550 | -0.812903 | 3.353650e-51 | -8.615850e-47 |
Msa0256540 | Msa0864550 | 0.825457 | 4.639047e-54 | -8.615850e-47 |
Msa0258910 | Msa0864550 | 0.824168 | 9.341143e-54 | -8.615850e-47 |
Msa0259450 | Msa0864550 | -0.828924 | 6.860069e-55 | -8.615850e-47 |
Msa0259570 | Msa0864550 | -0.813534 | 2.438260e-51 | -8.615850e-47 |
Msa0261350 | Msa0864550 | -0.838770 | 2.359968e-57 | -8.615850e-47 |
Msa0266140 | Msa0864550 | -0.827094 | 1.891656e-54 | -8.615850e-47 |
Msa0266150 | Msa0864550 | -0.817583 | 3.058771e-52 | -8.615850e-47 |
Msa0267450 | Msa0864550 | -0.822035 | 2.937430e-53 | -8.615850e-47 |
Msa0267510 | Msa0864550 | -0.824445 | 8.041597e-54 | -8.615850e-47 |
Msa0269220 | Msa0864550 | -0.808404 | 3.149948e-50 | -8.615850e-47 |
Msa0270730 | Msa0864550 | -0.826808 | 2.214160e-54 | -8.615850e-47 |
Msa0279810 | Msa0864550 | 0.825661 | 4.149821e-54 | -8.615850e-47 |
Msa0290800 | Msa0864550 | 0.803558 | 3.292207e-49 | -8.615850e-47 |
Msa0292060 | Msa0864550 | -0.804997 | 1.650984e-49 | -8.615850e-47 |
Msa0298400 | Msa0864550 | 0.825328 | 4.975920e-54 | -8.615850e-47 |
Msa0299130 | Msa0864550 | -0.834234 | 3.372067e-56 | -8.615850e-47 |
Msa0304060 | Msa0864550 | -0.818161 | 2.265225e-52 | -8.615850e-47 |
Msa0305630 | Msa0864550 | -0.823256 | 1.527961e-53 | -8.615850e-47 |
Msa0318280 | Msa0864550 | -0.802254 | 6.120740e-49 | -8.615850e-47 |
Msa0319220 | Msa0864550 | 0.825642 | 4.193071e-54 | -8.615850e-47 |
Msa0326170 | Msa0864550 | -0.818611 | 1.790631e-52 | -8.615850e-47 |
Msa0328870 | Msa0864550 | 0.801917 | 7.182140e-49 | -8.615850e-47 |
Msa0331070 | Msa0864550 | -0.827709 | 1.347161e-54 | -8.615850e-47 |
Msa0334320 | Msa0864550 | 0.820130 | 8.069691e-53 | -8.615850e-47 |
Msa0334450 | Msa0864550 | -0.807354 | 5.266934e-50 | -8.615850e-47 |
Msa0336120 | Msa0864550 | 0.804774 | 1.837922e-49 | -8.615850e-47 |
Msa0340700 | Msa0864550 | -0.836081 | 1.153530e-56 | -8.615850e-47 |
Msa0364030 | Msa0864550 | -0.862087 | 6.493865e-64 | -8.615850e-47 |
Msa0492330 | Msa0864550 | -0.808193 | 3.493436e-50 | -8.615850e-47 |
Msa0497140 | Msa0864550 | -0.808803 | 2.588789e-50 | -8.615850e-47 |
Msa0518150 | Msa0864550 | -0.803346 | 3.641669e-49 | -8.615850e-47 |
Msa0519070 | Msa0864550 | -0.827757 | 1.311873e-54 | -8.615850e-47 |
Msa0521260 | Msa0864550 | -0.802882 | 4.544035e-49 | -8.615850e-47 |
Msa0523420 | Msa0864550 | -0.804550 | 2.046843e-49 | -8.615850e-47 |
Msa0525180 | Msa0864550 | -0.819443 | 1.158195e-52 | -8.615850e-47 |
Msa0531270 | Msa0864550 | -0.804386 | 2.214634e-49 | -8.615850e-47 |
Msa0532870 | Msa0864550 | -0.800181 | 1.625567e-48 | -8.615850e-47 |
Msa0538050 | Msa0864550 | -0.807101 | 5.959173e-50 | -8.615850e-47 |
Msa0550980 | Msa0864550 | -0.803409 | 3.534736e-49 | -8.615850e-47 |
Msa0557440 | Msa0864550 | -0.827404 | 1.593848e-54 | -8.615850e-47 |
Msa0559690 | Msa0864550 | -0.804266 | 2.346200e-49 | -8.615850e-47 |
Msa0568300 | Msa0864550 | -0.809415 | 1.914264e-50 | -8.615850e-47 |
Msa0572730 | Msa0864550 | -0.837192 | 6.008270e-57 | -8.615850e-47 |
Msa0580410 | Msa0864550 | -0.821515 | 3.875089e-53 | -8.615850e-47 |
Msa0580890 | Msa0864550 | -0.828903 | 6.939057e-55 | -8.615850e-47 |
Msa0581350 | Msa0864550 | 0.829023 | 6.489189e-55 | -8.615850e-47 |
Msa0582270 | Msa0864550 | -0.849918 | 2.374515e-60 | -8.615850e-47 |
Msa0583270 | Msa0864550 | -0.811535 | 6.670103e-51 | -8.615850e-47 |
Msa0588110 | Msa0864550 | -0.821488 | 3.931691e-53 | -8.615850e-47 |
Msa0848670 | Msa0864550 | -0.808128 | 3.606644e-50 | -8.615850e-47 |
Msa0864550 | Msa0865420 | 0.812619 | 3.870880e-51 | -8.615850e-47 |
Msa0864550 | Msa0868050 | -0.808607 | 2.849583e-50 | -8.615850e-47 |
Msa0864550 | Msa0869320 | -0.806210 | 9.188773e-50 | -8.615850e-47 |
Msa0864550 | Msa0898830 | -0.801735 | 7.824469e-49 | -8.615850e-47 |
Msa0864550 | Msa0906680 | 0.808899 | 2.468969e-50 | -8.615850e-47 |
Msa0864550 | Msa0934290 | -0.807280 | 5.458577e-50 | -8.615850e-47 |
Msa0864550 | Msa0941150 | -0.821527 | 3.851771e-53 | -8.615850e-47 |
Msa0864550 | Msa0945160 | -0.823592 | 1.274848e-53 | -8.615850e-47 |
Msa0864550 | Msa0947550 | -0.827272 | 1.714823e-54 | -8.615850e-47 |
Msa0864550 | Msa0964400 | -0.834805 | 2.423099e-56 | -8.615850e-47 |
Msa0864550 | Msa0967900 | -0.838455 | 2.846794e-57 | -8.615850e-47 |
Msa0864550 | Msa0968060 | -0.828706 | 7.743960e-55 | -8.615850e-47 |
Msa0864550 | Msa0971690 | -0.801180 | 1.016605e-48 | -8.615850e-47 |
Msa0864550 | Msa0971780 | -0.812386 | 4.351321e-51 | -8.615850e-47 |
Msa0864550 | Msa0975960 | 0.812559 | 3.989740e-51 | -8.615850e-47 |
Msa0864550 | Msa0998660 | -0.840035 | 1.108084e-57 | -8.615850e-47 |
Msa0864550 | Msa1002550 | -0.818154 | 2.273433e-52 | -8.615850e-47 |
Msa0864550 | Msa1014550 | -0.821326 | 4.284176e-53 | -8.615850e-47 |
Msa0864550 | Msa1016580 | -0.806152 | 9.449689e-50 | -8.615850e-47 |
Msa0864550 | Msa1023210 | 0.809370 | 1.956733e-50 | -8.615850e-47 |
Msa0864550 | Msa1028890 | -0.816175 | 6.333629e-52 | -8.615850e-47 |
Msa0864550 | Msa1029030 | -0.806990 | 6.288758e-50 | -8.615850e-47 |
Msa0864550 | Msa1031190 | -0.806210 | 9.188773e-50 | -8.615850e-47 |
Msa0864550 | Msa1036260 | -0.814319 | 1.636781e-51 | -8.615850e-47 |
Msa0864550 | Msa1039440 | -0.805037 | 1.619665e-49 | -8.615850e-47 |
Msa0864550 | Msa1055520 | -0.802375 | 5.779963e-49 | -8.615850e-47 |
Msa0864550 | Msa1066770 | 0.823811 | 1.132823e-53 | -8.615850e-47 |
Msa0864550 | Msa1067000 | 0.812364 | 4.399941e-51 | -8.615850e-47 |
Msa0864550 | Msa1068010 | -0.807671 | 4.509997e-50 | -8.615850e-47 |
Msa0864550 | Msa1070370 | -0.805324 | 1.410253e-49 | -8.615850e-47 |
Msa0864550 | Msa1070630 | -0.819580 | 1.077911e-52 | -8.615850e-47 |
Msa0864550 | Msa1078590 | -0.822595 | 2.177633e-53 | -8.615850e-47 |
Msa0864550 | Msa1078760 | -0.827870 | 1.232329e-54 | -8.615850e-47 |
Msa0864550 | Msa1078770 | -0.803105 | 4.086599e-49 | -8.615850e-47 |
Msa0864550 | Msa1088000 | -0.817250 | 3.634299e-52 | -8.615850e-47 |
Msa0864550 | Msa1088400 | -0.825550 | 4.410714e-54 | -8.615850e-47 |
Msa0864550 | Msa1088740 | -0.800040 | 1.736830e-48 | -8.615850e-47 |
Msa0864550 | Msa1093190 | -0.805916 | 1.059438e-49 | -8.615850e-47 |
Msa0864550 | Msa1106730 | -0.811454 | 6.945618e-51 | -8.615850e-47 |
Msa0864550 | Msa1112190 | 0.803948 | 2.731978e-49 | -8.615850e-47 |
Msa0864550 | Msa1117770 | -0.828153 | 1.053171e-54 | -8.615850e-47 |
Msa0864550 | Msa1119420 | -0.808457 | 3.068951e-50 | -8.615850e-47 |
Msa0864550 | Msa1121720 | -0.836533 | 8.850075e-57 | -8.615850e-47 |
Msa0864550 | Msa1121920 | -0.805771 | 1.136410e-49 | -8.615850e-47 |
Msa0864550 | Msa1122710 | -0.802462 | 5.546619e-49 | -8.615850e-47 |
Msa0864550 | Msa1129120 | -0.816029 | 6.826783e-52 | -8.615850e-47 |
Msa0864550 | Msa1129880 | -0.804003 | 2.661094e-49 | -8.615850e-47 |
Msa0864550 | Msa1130150 | -0.822876 | 1.873272e-53 | -8.615850e-47 |
Msa0864550 | Msa1132250 | -0.802393 | 5.732391e-49 | -8.615850e-47 |
Msa0864550 | Msa1132880 | -0.825932 | 3.578668e-54 | -8.615850e-47 |
Msa0864550 | Msa1143860 | -0.805772 | 1.135954e-49 | -8.615850e-47 |
Msa0864550 | Msa1156120 | -0.841180 | 5.555780e-58 | -8.615850e-47 |
Msa0864550 | Msa1156430 | -0.818525 | 1.873465e-52 | -8.615850e-47 |
Msa0864550 | Msa1158180 | -0.806409 | 8.341093e-50 | -8.615850e-47 |
Msa0864550 | Msa1158450 | -0.803123 | 4.050266e-49 | -8.615850e-47 |
Msa0864550 | Msa1165460 | 0.809353 | 1.972955e-50 | -8.615850e-47 |
Msa0864550 | Msa1169590 | -0.813821 | 2.108592e-51 | -8.615850e-47 |
Msa0864550 | Msa1169600 | -0.808782 | 2.615476e-50 | -8.615850e-47 |
Msa0864550 | Msa1190350 | -0.803947 | 2.733630e-49 | -8.615850e-47 |
Msa0864550 | Msa1191530 | -0.837035 | 6.589945e-57 | -8.615850e-47 |
Msa0864550 | Msa1191960 | -0.801381 | 9.247218e-49 | -8.615850e-47 |
Msa0864550 | Msa1194480 | -0.814255 | 1.690600e-51 | -8.615850e-47 |
Msa0864550 | Msa1199540 | -0.832079 | 1.159544e-55 | -8.615850e-47 |
Msa0864550 | Msa1204870 | -0.831281 | 1.824582e-55 | -8.615850e-47 |
Msa0864550 | Msa1204900 | -0.838476 | 2.811166e-57 | -8.615850e-47 |
Msa0864550 | Msa1205270 | -0.842355 | 2.720618e-58 | -8.615850e-47 |
Msa0864550 | Msa1209990 | -0.847213 | 1.332727e-59 | -8.615850e-47 |
Msa0864550 | Msa1212150 | -0.820767 | 5.763561e-53 | -8.615850e-47 |
Msa0864550 | Msa1212210 | -0.811203 | 7.874869e-51 | -8.615850e-47 |
Msa0864550 | Msa1221270 | 0.806393 | 8.409287e-50 | -8.615850e-47 |
Msa0864550 | Msa1225140 | -0.806711 | 7.205122e-50 | -8.615850e-47 |
Msa0864550 | Msa1228260 | -0.807815 | 4.204615e-50 | -8.615850e-47 |
Msa0864550 | Msa1228600 | -0.807375 | 5.213641e-50 | -8.615850e-47 |
Msa0864550 | Msa1254910 | 0.809859 | 1.536153e-50 | -8.615850e-47 |
Msa0864550 | Msa1255030 | -0.805669 | 1.194017e-49 | -8.615850e-47 |
Msa0864550 | Msa1256490 | -0.838964 | 2.102650e-57 | -8.615850e-47 |
Msa0864550 | Msa1266120 | -0.827195 | 1.788602e-54 | -8.615850e-47 |
Msa0864550 | Msa1266750 | -0.806195 | 9.254802e-50 | -8.615850e-47 |
Msa0864550 | Msa1271220 | -0.808670 | 2.763320e-50 | -8.615850e-47 |
Msa0864550 | Msa1279200 | -0.825513 | 4.499058e-54 | -8.615850e-47 |
Msa0864550 | Msa1291070 | -0.811135 | 8.144982e-51 | -8.615850e-47 |
Msa0864550 | Msa1295210 | -0.810210 | 1.290976e-50 | -8.615850e-47 |
Msa0864550 | Msa1295480 | -0.804701 | 1.903715e-49 | -8.615850e-47 |
Msa0864550 | Msa1296810 | -0.835632 | 1.499001e-56 | -8.615850e-47 |
Msa0864550 | Msa1297220 | -0.819347 | 1.218415e-52 | -8.615850e-47 |
Msa0864550 | Msa1298480 | -0.846720 | 1.819632e-59 | -8.615850e-47 |
Msa0864550 | Msa1303690 | -0.802510 | 5.421084e-49 | -8.615850e-47 |
Msa0864550 | Msa1308430 | -0.807426 | 5.084445e-50 | -8.615850e-47 |
Msa0864550 | Msa1315880 | -0.830136 | 3.480869e-55 | -8.615850e-47 |
Msa0864550 | Msa1323260 | -0.813996 | 1.928892e-51 | -8.615850e-47 |
Msa0864550 | Msa1326780 | -0.805862 | 1.087515e-49 | -8.615850e-47 |
Msa0864550 | Msa1328680 | -0.825971 | 3.503871e-54 | -8.615850e-47 |
Msa0864550 | Msa1341710 | -0.821796 | 3.336980e-53 | -8.615850e-47 |
Msa0864550 | Msa1342110 | -0.825944 | 3.555563e-54 | -8.615850e-47 |
Msa0864550 | Msa1342360 | -0.861888 | 7.476640e-64 | -8.615850e-47 |
Msa0864550 | Msa1348860 | -0.803102 | 4.092404e-49 | -8.615850e-47 |
Msa0864550 | Msa1350580 | -0.824987 | 5.991989e-54 | -8.615850e-47 |
Msa0864550 | Msa1350590 | -0.818507 | 1.890720e-52 | -8.615850e-47 |
Msa0864550 | Msa1352600 | -0.808850 | 2.529134e-50 | -8.615850e-47 |
Msa0864550 | Msa1356100 | -0.837031 | 6.607889e-57 | -8.615850e-47 |
Msa0864550 | Msa1361580 | -0.814404 | 1.567677e-51 | -8.615850e-47 |
Msa0864550 | Msa1363170 | -0.800199 | 1.611996e-48 | -8.615850e-47 |
Msa0864550 | Msa1366140 | -0.804951 | 1.688022e-49 | -8.615850e-47 |
Msa0864550 | Msa1368390 | 0.808099 | 3.657234e-50 | -8.615850e-47 |
Msa0864550 | Msa1373310 | -0.822280 | 2.576946e-53 | -8.615850e-47 |
Msa0864550 | Msa1373420 | -0.801278 | 9.707983e-49 | -8.615850e-47 |
Msa0864550 | Msa1375980 | -0.804289 | 2.320352e-49 | -8.615850e-47 |
Msa0864550 | Msa1376010 | -0.807680 | 4.491456e-50 | -8.615850e-47 |
Msa0864550 | Msa1377980 | -0.829432 | 5.165080e-55 | -8.615850e-47 |
Msa0864550 | Msa1384410 | -0.835326 | 1.791489e-56 | -8.615850e-47 |
Msa0864550 | Msa1384970 | -0.806534 | 7.852232e-50 | -8.615850e-47 |
Msa0864550 | Msa1386910 | -0.819859 | 9.306775e-53 | -8.615850e-47 |
Msa0864550 | Msa1388720 | -0.817040 | 4.051616e-52 | -8.615850e-47 |
Msa0864550 | Msa1395380 | -0.815980 | 6.999697e-52 | -8.615850e-47 |
Msa0864550 | Msa1405830 | 0.803733 | 3.028270e-49 | -8.615850e-47 |
Msa0864550 | Msa1408230 | -0.829813 | 4.173157e-55 | -8.615850e-47 |
Msa0864550 | Msa1408280 | -0.830744 | 2.471881e-55 | -8.615850e-47 |
Msa0864550 | Msa1408860 | -0.823626 | 1.251862e-53 | -8.615850e-47 |
Msa0864550 | Msa1410480 | -0.810791 | 9.669447e-51 | -8.615850e-47 |
Msa0864550 | Msa1410500 | -0.819034 | 1.435274e-52 | -8.615850e-47 |
Msa0864550 | Msa1412330 | -0.822151 | 2.760841e-53 | -8.615850e-47 |
Msa0864550 | Msa1414780 | -0.836479 | 9.132890e-57 | -8.615850e-47 |
Msa0864550 | Msa1415510 | -0.824654 | 7.177929e-54 | -8.615850e-47 |
Msa0864550 | Msa1418840 | -0.808029 | 3.785210e-50 | -8.615850e-47 |
Msa0864550 | Msa1423560 | -0.819422 | 1.171487e-52 | -8.615850e-47 |
Msa0864550 | Msa1436660 | -0.805717 | 1.166371e-49 | -8.615850e-47 |
Msa0864550 | Msa1444130 | -0.834673 | 2.615564e-56 | -8.615850e-47 |
Msa0864550 | Msa1444690 | -0.826385 | 2.793160e-54 | -8.615850e-47 |
Msa0864550 | Msa1449270 | -0.816048 | 6.761011e-52 | -8.615850e-47 |
Msa0864550 | Msa1451200 | -0.808204 | 3.474016e-50 | -8.615850e-47 |
Msa0864550 | Msa1452800 | -0.803564 | 3.283057e-49 | -8.615850e-47 |
Msa0864550 | Msa1454300 | -0.817298 | 3.546583e-52 | -8.615850e-47 |
Msa0864550 | Msa1459130 | -0.843401 | 1.433623e-58 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0864550 | MtrunA17_Chr5g0447101 | 94.118 | 238 | 14 | 0 | 1 | 238 | 1 | 238 | 1.94e-169 | 466 |
Msa0864550 | MtrunA17_Chr8g0381351 | 30.918 | 207 | 142 | 1 | 33 | 238 | 188 | 394 | 1.31e-33 | 124 |
Msa0864550 | MtrunA17_Chr8g0369721 | 24.615 | 195 | 139 | 6 | 44 | 234 | 8 | 198 | 3.47e-13 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0864550 | AT4G26490.1 | 44.175 | 206 | 115 | 0 | 33 | 238 | 63 | 268 | 4.29e-65 | 203 |
Msa0864550 | AT5G56050.1 | 42.060 | 233 | 124 | 4 | 6 | 238 | 61 | 282 | 3.14e-62 | 196 |
Msa0864550 | AT1G13050.1 | 32.632 | 190 | 127 | 1 | 50 | 238 | 128 | 317 | 4.20e-28 | 108 |
Msa0864550 | AT1G13050.3 | 32.704 | 159 | 106 | 1 | 81 | 238 | 27 | 185 | 1.71e-27 | 104 |
Msa0864550 | AT1G13050.2 | 32.704 | 159 | 106 | 1 | 81 | 238 | 27 | 185 | 1.71e-27 | 104 |
Msa0864550 | AT3G26350.2 | 31.579 | 190 | 129 | 1 | 50 | 238 | 152 | 341 | 8.15e-27 | 106 |
Msa0864550 | AT3G26350.1 | 31.579 | 190 | 129 | 1 | 50 | 238 | 167 | 356 | 1.08e-26 | 105 |
Find 38 sgRNAs with CRISPR-Local
Find 47 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCTTTGGCTTCTGAGTAAA+AGG | 0.201329 | 5_4:+64955519 | None:intergenic |
AGCTTTACACTTATCTTCTT+TGG | 0.214240 | 5_4:-64955771 | Msa0864550:CDS |
CTATGCAAAGGGAACATTTA+AGG | 0.223322 | 5_4:-64955394 | Msa0864550:CDS |
AGTCAAAATTTACAACATTT+AGG | 0.299761 | 5_4:+64955679 | None:intergenic |
GCATTAGAAATATCAAATAA+AGG | 0.310217 | 5_4:+64955705 | None:intergenic |
GGTTGCTTGGTTTGAGTGTA+AGG | 0.338313 | 5_4:+64955727 | None:intergenic |
AAGAAAGTTGGCAATACTTA+AGG | 0.339972 | 5_4:-64955856 | Msa0864550:CDS |
TTTGATATGATAGGTTGTTC+AGG | 0.370467 | 5_4:+64955918 | None:intergenic |
GTTTGATATCTAGTTTCCTT+TGG | 0.377149 | 5_4:+64955504 | None:intergenic |
AAAGGGAGTTGCAAAACAAT+AGG | 0.383249 | 5_4:-64955425 | Msa0864550:CDS |
CATTAGAAATATCAAATAAA+GGG | 0.385546 | 5_4:+64955706 | None:intergenic |
CTTGATGATCTTGTTCTAAG+AGG | 0.391536 | 5_4:+64955876 | None:intergenic |
AAAAGACCAAACCAATTGTA+TGG | 0.403433 | 5_4:-64955821 | Msa0864550:CDS |
TTCTGAGGGTGGAGATGTGT+TGG | 0.412326 | 5_4:+64955962 | None:intergenic |
AGCAAACCATACAATTGGTT+TGG | 0.414083 | 5_4:+64955815 | None:intergenic |
GACTCAAAGCAATACTTCAA+TGG | 0.427271 | 5_4:-64955660 | Msa0864550:CDS |
ATTGCAGCAAACCATACAAT+TGG | 0.442844 | 5_4:+64955810 | None:intergenic |
ATATCAAATAAAGGGTTGCT+TGG | 0.463721 | 5_4:+64955714 | None:intergenic |
AACAAGATCATCAAGAAAGT+TGG | 0.467969 | 5_4:-64955868 | Msa0864550:CDS |
TTAAGGTGAAGGTTAATATG+TGG | 0.477400 | 5_4:-64955377 | Msa0864550:CDS |
TTCAATATTAGTTTGTTCTG+AGG | 0.495171 | 5_4:+64955947 | None:intergenic |
TCAATATTAGTTTGTTCTGA+GGG | 0.505732 | 5_4:+64955948 | None:intergenic |
TCTGAGGGTGGAGATGTGTT+GGG | 0.505757 | 5_4:+64955963 | None:intergenic |
GTGGACCAGTCATCTCAATC+TGG | 0.507976 | 5_4:+64955319 | None:intergenic |
CTAGCTACAAGAGAACCATT+TGG | 0.518577 | 5_4:+64955297 | None:intergenic |
GAGATGACTGGTCCACCAAA+TGG | 0.523109 | 5_4:-64955312 | Msa0864550:CDS |
AAAGGAAACTAGATATCAAA+CGG | 0.532877 | 5_4:-64955502 | Msa0864550:CDS |
AAACTAGATATCAAACGGTA+AGG | 0.546166 | 5_4:-64955497 | Msa0864550:CDS |
AAAGGGAACATTTAAGGTGA+AGG | 0.548043 | 5_4:-64955388 | Msa0864550:CDS |
TAGGTTGAGTTGCTATGCAA+AGG | 0.548893 | 5_4:-64955406 | Msa0864550:CDS |
AGGTTGAGTTGCTATGCAAA+GGG | 0.552779 | 5_4:-64955405 | Msa0864550:CDS |
AAGTTGGTGTGAAACTTCAA+AGG | 0.555056 | 5_4:-64955443 | Msa0864550:CDS |
ATATTAGTTTGTTCTGAGGG+TGG | 0.577316 | 5_4:+64955951 | None:intergenic |
GCTACAAGAGAACCATTTGG+TGG | 0.579822 | 5_4:+64955300 | None:intergenic |
AGTTTCACACCAACTTCTTG+AGG | 0.595238 | 5_4:+64955450 | None:intergenic |
AGTTGGTGTGAAACTTCAAA+GGG | 0.596723 | 5_4:-64955442 | Msa0864550:CDS |
CCAATAGAAAAGTTCATGTG+AGG | 0.604027 | 5_4:-64955605 | Msa0864550:CDS |
GTGTGCCAGATTGAGATGAC+TGG | 0.624651 | 5_4:-64955324 | Msa0864550:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CATTAGAAATATCAAATAAA+GGG | + | chr5_4:64955541-64955560 | None:intergenic | 15.0% |
!! | GCATTAGAAATATCAAATAA+AGG | + | chr5_4:64955542-64955561 | None:intergenic | 20.0% |
!! | AGTCAAAATTTACAACATTT+AGG | + | chr5_4:64955568-64955587 | None:intergenic | 20.0% |
!!! | TCAATATTAGTTTGTTCTGA+GGG | + | chr5_4:64955299-64955318 | None:intergenic | 25.0% |
!!! | TTCAATATTAGTTTGTTCTG+AGG | + | chr5_4:64955300-64955319 | None:intergenic | 25.0% |
!!! | TTGGTTTGTTTTGATATGAT+AGG | + | chr5_4:64955338-64955357 | None:intergenic | 25.0% |
!! | TTCAACTTTTCTACTCAAAT+AGG | - | chr5_4:64955678-64955697 | Msa0864550:CDS | 25.0% |
! | AAAGGAAACTAGATATCAAA+CGG | - | chr5_4:64955742-64955761 | Msa0864550:CDS | 25.0% |
!! | GGATTATACATTCATCTTTT+TGG | - | chr5_4:64955888-64955907 | Msa0864550:CDS | 25.0% |
TTTGATATGATAGGTTGTTC+AGG | + | chr5_4:64955329-64955348 | None:intergenic | 30.0% | |
!!! | TCTAAGAGGATGTTGATTTT+TGG | + | chr5_4:64955357-64955376 | None:intergenic | 30.0% |
AACAAGATCATCAAGAAAGT+TGG | - | chr5_4:64955376-64955395 | Msa0864550:CDS | 30.0% | |
AAGAAAGTTGGCAATACTTA+AGG | - | chr5_4:64955388-64955407 | Msa0864550:CDS | 30.0% | |
AAAAGACCAAACCAATTGTA+TGG | - | chr5_4:64955423-64955442 | Msa0864550:CDS | 30.0% | |
AGCTTTACACTTATCTTCTT+TGG | - | chr5_4:64955473-64955492 | Msa0864550:CDS | 30.0% | |
ATATCAAATAAAGGGTTGCT+TGG | + | chr5_4:64955533-64955552 | None:intergenic | 30.0% | |
! | CTCACATGAACTTTTCTATT+GGG | + | chr5_4:64955641-64955660 | None:intergenic | 30.0% |
! | GTTTGATATCTAGTTTCCTT+TGG | + | chr5_4:64955743-64955762 | None:intergenic | 30.0% |
AAACTAGATATCAAACGGTA+AGG | - | chr5_4:64955747-64955766 | Msa0864550:CDS | 30.0% | |
! | ATTTTTATGCCTCAAGAAGT+TGG | - | chr5_4:64955785-64955804 | Msa0864550:CDS | 30.0% |
TTAAGGTGAAGGTTAATATG+TGG | - | chr5_4:64955867-64955886 | Msa0864550:CDS | 30.0% | |
!! | ATATTAGTTTGTTCTGAGGG+TGG | + | chr5_4:64955296-64955315 | None:intergenic | 35.0% |
! | CTTGATGATCTTGTTCTAAG+AGG | + | chr5_4:64955371-64955390 | None:intergenic | 35.0% |
!!! | CAATTGGTTTGGTCTTTTGT+TGG | + | chr5_4:64955421-64955440 | None:intergenic | 35.0% |
AGCAAACCATACAATTGGTT+TGG | + | chr5_4:64955432-64955451 | None:intergenic | 35.0% | |
ATTGCAGCAAACCATACAAT+TGG | + | chr5_4:64955437-64955456 | None:intergenic | 35.0% | |
GACTCAAAGCAATACTTCAA+TGG | - | chr5_4:64955584-64955603 | Msa0864550:CDS | 35.0% | |
! | CCTCACATGAACTTTTCTAT+TGG | + | chr5_4:64955642-64955661 | None:intergenic | 35.0% |
CCAATAGAAAAGTTCATGTG+AGG | - | chr5_4:64955639-64955658 | Msa0864550:CDS | 35.0% | |
!! | AAGTTGGTGTGAAACTTCAA+AGG | - | chr5_4:64955801-64955820 | Msa0864550:CDS | 35.0% |
! | AGTTGGTGTGAAACTTCAAA+GGG | - | chr5_4:64955802-64955821 | Msa0864550:CDS | 35.0% |
AAAGGGAGTTGCAAAACAAT+AGG | - | chr5_4:64955819-64955838 | Msa0864550:CDS | 35.0% | |
CTATGCAAAGGGAACATTTA+AGG | - | chr5_4:64955850-64955869 | Msa0864550:CDS | 35.0% | |
! | AAAGGGAACATTTAAGGTGA+AGG | - | chr5_4:64955856-64955875 | Msa0864550:CDS | 35.0% |
! | TCCTTTGGCTTCTGAGTAAA+AGG | + | chr5_4:64955728-64955747 | None:intergenic | 40.0% |
AGTTTCACACCAACTTCTTG+AGG | + | chr5_4:64955797-64955816 | None:intergenic | 40.0% | |
! | TAGGTTGAGTTGCTATGCAA+AGG | - | chr5_4:64955838-64955857 | Msa0864550:CDS | 40.0% |
! | AGGTTGAGTTGCTATGCAAA+GGG | - | chr5_4:64955839-64955858 | Msa0864550:CDS | 40.0% |
CTAGCTACAAGAGAACCATT+TGG | + | chr5_4:64955950-64955969 | None:intergenic | 40.0% | |
! | GGTTGCTTGGTTTGAGTGTA+AGG | + | chr5_4:64955520-64955539 | None:intergenic | 45.0% |
! | GCCTTTTACTCAGAAGCCAA+AGG | - | chr5_4:64955724-64955743 | Msa0864550:CDS | 45.0% |
GCTACAAGAGAACCATTTGG+TGG | + | chr5_4:64955947-64955966 | None:intergenic | 45.0% | |
TCTGAGGGTGGAGATGTGTT+GGG | + | chr5_4:64955284-64955303 | None:intergenic | 50.0% | |
! | TTCTGAGGGTGGAGATGTGT+TGG | + | chr5_4:64955285-64955304 | None:intergenic | 50.0% |
GTGTGCCAGATTGAGATGAC+TGG | - | chr5_4:64955920-64955939 | Msa0864550:CDS | 50.0% | |
GTGGACCAGTCATCTCAATC+TGG | + | chr5_4:64955928-64955947 | None:intergenic | 50.0% | |
! | GAGATGACTGGTCCACCAAA+TGG | - | chr5_4:64955932-64955951 | Msa0864550:CDS | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 64955275 | 64955991 | 64955275 | ID=Msa0864550;Name=Msa0864550 |
chr5_4 | mRNA | 64955275 | 64955991 | 64955275 | ID=Msa0864550-mRNA-1;Parent=Msa0864550;Name=Msa0864550-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|-1|0|1|-1|1|1|0|238 |
chr5_4 | exon | 64955275 | 64955991 | 64955275 | ID=Msa0864550-mRNA-1:exon:20456;Parent=Msa0864550-mRNA-1 |
chr5_4 | CDS | 64955275 | 64955991 | 64955275 | ID=Msa0864550-mRNA-1:cds;Parent=Msa0864550-mRNA-1 |
Gene Sequence |
Protein sequence |