Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0705440 | XP_024629653.2 | 89.241 | 158 | 13 | 2 | 1 | 158 | 1 | 154 | 6.50e-77 | 242 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0705440 | sp|Q9LSA9|PUMPK_ARATH | 83.333 | 84 | 12 | 1 | 77 | 158 | 85 | 168 | 8.38e-42 | 145 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0705440 | A0A396GWA1 | 89.241 | 158 | 13 | 2 | 1 | 158 | 1 | 154 | 3.10e-77 | 242 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001460 | Msa0705440 | 0.805254 | 1.458840e-49 | -8.615850e-47 |
| Msa0004350 | Msa0705440 | 0.805864 | 1.086681e-49 | -8.615850e-47 |
| Msa0017120 | Msa0705440 | 0.812238 | 4.688240e-51 | -8.615850e-47 |
| Msa0017940 | Msa0705440 | 0.804762 | 1.849236e-49 | -8.615850e-47 |
| Msa0020630 | Msa0705440 | 0.809003 | 2.344829e-50 | -8.615850e-47 |
| Msa0030000 | Msa0705440 | 0.815635 | 8.357318e-52 | -8.615850e-47 |
| Msa0030400 | Msa0705440 | 0.842684 | 2.225241e-58 | -8.615850e-47 |
| Msa0030730 | Msa0705440 | 0.840537 | 8.191824e-58 | -8.615850e-47 |
| Msa0031720 | Msa0705440 | 0.805575 | 1.249352e-49 | -8.615850e-47 |
| Msa0037820 | Msa0705440 | 0.825796 | 3.854637e-54 | -8.615850e-47 |
| Msa0040410 | Msa0705440 | 0.811265 | 7.635039e-51 | -8.615850e-47 |
| Msa0044250 | Msa0705440 | 0.833883 | 4.129502e-56 | -8.615850e-47 |
| Msa0045660 | Msa0705440 | 0.813314 | 2.724639e-51 | -8.615850e-47 |
| Msa0046360 | Msa0705440 | 0.808551 | 2.929467e-50 | -8.615850e-47 |
| Msa0047470 | Msa0705440 | 0.815517 | 8.876592e-52 | -8.615850e-47 |
| Msa0051600 | Msa0705440 | 0.820692 | 5.995918e-53 | -8.615850e-47 |
| Msa0061320 | Msa0705440 | 0.804172 | 2.454065e-49 | -8.615850e-47 |
| Msa0062750 | Msa0705440 | 0.856577 | 2.927650e-62 | -8.615850e-47 |
| Msa0065390 | Msa0705440 | 0.806384 | 8.442939e-50 | -8.615850e-47 |
| Msa0073350 | Msa0705440 | 0.826706 | 2.341479e-54 | -8.615850e-47 |
| Msa0073820 | Msa0705440 | 0.804591 | 2.006696e-49 | -8.615850e-47 |
| Msa0084680 | Msa0705440 | 0.855429 | 6.346496e-62 | -8.615850e-47 |
| Msa0089210 | Msa0705440 | 0.824146 | 9.452109e-54 | -8.615850e-47 |
| Msa0089530 | Msa0705440 | 0.816206 | 6.231273e-52 | -8.615850e-47 |
| Msa0090800 | Msa0705440 | 0.806214 | 9.171857e-50 | -8.615850e-47 |
| Msa0091480 | Msa0705440 | 0.850334 | 1.816671e-60 | -8.615850e-47 |
| Msa0091550 | Msa0705440 | 0.855607 | 5.631912e-62 | -8.615850e-47 |
| Msa0091770 | Msa0705440 | 0.800723 | 1.260971e-48 | -8.615850e-47 |
| Msa0092660 | Msa0705440 | 0.816415 | 5.595184e-52 | -8.615850e-47 |
| Msa0092680 | Msa0705440 | 0.812303 | 4.537030e-51 | -8.615850e-47 |
| Msa0092730 | Msa0705440 | 0.819701 | 1.011402e-52 | -8.615850e-47 |
| Msa0094700 | Msa0705440 | 0.833053 | 6.652010e-56 | -8.615850e-47 |
| Msa0105210 | Msa0705440 | 0.805052 | 1.607627e-49 | -8.615850e-47 |
| Msa0110710 | Msa0705440 | 0.801374 | 9.281354e-49 | -8.615850e-47 |
| Msa0115010 | Msa0705440 | 0.809325 | 2.000634e-50 | -8.615850e-47 |
| Msa0120180 | Msa0705440 | 0.802115 | 6.537085e-49 | -8.615850e-47 |
| Msa0605620 | Msa0705440 | 0.852352 | 4.883397e-61 | -8.615850e-47 |
| Msa0606060 | Msa0705440 | 0.800936 | 1.140775e-48 | -8.615850e-47 |
| Msa0607300 | Msa0705440 | 0.842807 | 2.063246e-58 | -8.615850e-47 |
| Msa0607440 | Msa0705440 | 0.814669 | 1.369303e-51 | -8.615850e-47 |
| Msa0609990 | Msa0705440 | 0.852847 | 3.527345e-61 | -8.615850e-47 |
| Msa0619330 | Msa0705440 | 0.829008 | 6.546618e-55 | -8.615850e-47 |
| Msa0622390 | Msa0705440 | 0.813564 | 2.401507e-51 | -8.615850e-47 |
| Msa0622690 | Msa0705440 | 0.823636 | 1.245165e-53 | -8.615850e-47 |
| Msa0623270 | Msa0705440 | 0.830638 | 2.623300e-55 | -8.615850e-47 |
| Msa0624730 | Msa0705440 | 0.804263 | 2.349607e-49 | -8.615850e-47 |
| Msa0628060 | Msa0705440 | 0.813605 | 2.351920e-51 | -8.615850e-47 |
| Msa0629290 | Msa0705440 | 0.807353 | 5.267607e-50 | -8.615850e-47 |
| Msa0629500 | Msa0705440 | 0.828270 | 9.868752e-55 | -8.615850e-47 |
| Msa0645780 | Msa0705440 | 0.811042 | 8.530420e-51 | -8.615850e-47 |
| Msa0645820 | Msa0705440 | 0.810550 | 1.090088e-50 | -8.615850e-47 |
| Msa0647220 | Msa0705440 | 0.819679 | 1.023531e-52 | -8.615850e-47 |
| Msa0647710 | Msa0705440 | 0.803565 | 3.281185e-49 | -8.615850e-47 |
| Msa0650360 | Msa0705440 | 0.852138 | 5.617395e-61 | -8.615850e-47 |
| Msa0651400 | Msa0705440 | 0.805025 | 1.628706e-49 | -8.615850e-47 |
| Msa0651410 | Msa0705440 | 0.809366 | 1.960614e-50 | -8.615850e-47 |
| Msa0657670 | Msa0705440 | 0.800386 | 1.476683e-48 | -8.615850e-47 |
| Msa0659040 | Msa0705440 | 0.830427 | 2.955115e-55 | -8.615850e-47 |
| Msa0659070 | Msa0705440 | 0.843121 | 1.702594e-58 | -8.615850e-47 |
| Msa0667970 | Msa0705440 | 0.822891 | 1.858226e-53 | -8.615850e-47 |
| Msa0674220 | Msa0705440 | 0.819138 | 1.359169e-52 | -8.615850e-47 |
| Msa0674300 | Msa0705440 | 0.805358 | 1.387102e-49 | -8.615850e-47 |
| Msa0677840 | Msa0705440 | 0.803265 | 3.785333e-49 | -8.615850e-47 |
| Msa0681890 | Msa0705440 | 0.800563 | 1.358845e-48 | -8.615850e-47 |
| Msa0685540 | Msa0705440 | 0.816777 | 4.642841e-52 | -8.615850e-47 |
| Msa0690350 | Msa0705440 | 0.809581 | 1.763028e-50 | -8.615850e-47 |
| Msa0690530 | Msa0705440 | 0.806518 | 7.913986e-50 | -8.615850e-47 |
| Msa0691100 | Msa0705440 | 0.802643 | 5.089610e-49 | -8.615850e-47 |
| Msa0703720 | Msa0705440 | 0.820601 | 6.291875e-53 | -8.615850e-47 |
| Msa0703760 | Msa0705440 | 0.827499 | 1.512832e-54 | -8.615850e-47 |
| Msa0704570 | Msa0705440 | 0.812304 | 4.535689e-51 | -8.615850e-47 |
| Msa0704990 | Msa0705440 | 0.808811 | 2.577993e-50 | -8.615850e-47 |
| Msa0705440 | Msa0707780 | 0.825907 | 3.628889e-54 | -8.615850e-47 |
| Msa0705440 | Msa0709480 | 0.837856 | 4.059867e-57 | -8.615850e-47 |
| Msa0705440 | Msa0719340 | 0.813123 | 3.000905e-51 | -8.615850e-47 |
| Msa0705440 | Msa0720270 | 0.810104 | 1.360682e-50 | -8.615850e-47 |
| Msa0705440 | Msa0724050 | 0.819972 | 8.770613e-53 | -8.615850e-47 |
| Msa0705440 | Msa0730180 | 0.810754 | 9.851074e-51 | -8.615850e-47 |
| Msa0705440 | Msa0733000 | 0.809665 | 1.690835e-50 | -8.615850e-47 |
| Msa0705440 | Msa0748930 | 0.816595 | 5.098980e-52 | -8.615850e-47 |
| Msa0705440 | Msa0750380 | 0.815458 | 9.149977e-52 | -8.615850e-47 |
| Msa0705440 | Msa0760890 | 0.801742 | 7.801491e-49 | -8.615850e-47 |
| Msa0705440 | Msa0763880 | 0.823944 | 1.054213e-53 | -8.615850e-47 |
| Msa0705440 | Msa0763910 | 0.825879 | 3.684860e-54 | -8.615850e-47 |
| Msa0705440 | Msa0770430 | 0.841035 | 6.066369e-58 | -8.615850e-47 |
| Msa0705440 | Msa0772150 | 0.817322 | 3.501976e-52 | -8.615850e-47 |
| Msa0705440 | Msa0780140 | 0.844693 | 6.454512e-59 | -8.615850e-47 |
| Msa0705440 | Msa0789800 | 0.824876 | 6.363519e-54 | -8.615850e-47 |
| Msa0705440 | Msa0790180 | 0.800685 | 1.283268e-48 | -8.615850e-47 |
| Msa0705440 | Msa0790830 | 0.836436 | 9.370885e-57 | -8.615850e-47 |
| Msa0705440 | Msa0794460 | 0.813249 | 2.816379e-51 | -8.615850e-47 |
| Msa0705440 | Msa0811510 | 0.824218 | 9.091815e-54 | -8.615850e-47 |
| Msa0705440 | Msa0814780 | 0.801130 | 1.040829e-48 | -8.615850e-47 |
| Msa0705440 | Msa0824140 | 0.835246 | 1.875765e-56 | -8.615850e-47 |
| Msa0705440 | Msa0830120 | 0.800580 | 1.348236e-48 | -8.615850e-47 |
| Msa0705440 | Msa0830720 | 0.831242 | 1.865407e-55 | -8.615850e-47 |
| Msa0705440 | Msa0843690 | 0.823768 | 1.159469e-53 | -8.615850e-47 |
| Msa0705440 | Msa0844100 | 0.808045 | 3.755996e-50 | -8.615850e-47 |
| Msa0705440 | Msa0851740 | 0.831146 | 1.969108e-55 | -8.615850e-47 |
| Msa0705440 | Msa0853920 | 0.818439 | 1.958905e-52 | -8.615850e-47 |
| Msa0705440 | Msa0863250 | 0.840528 | 8.237228e-58 | -8.615850e-47 |
| Msa0705440 | Msa0867340 | 0.810457 | 1.141948e-50 | -8.615850e-47 |
| Msa0705440 | Msa0872660 | 0.813032 | 3.142357e-51 | -8.615850e-47 |
| Msa0705440 | Msa0874760 | 0.806442 | 8.211296e-50 | -8.615850e-47 |
| Msa0705440 | Msa0882700 | 0.818299 | 2.107072e-52 | -8.615850e-47 |
| Msa0705440 | Msa0893390 | 0.810842 | 9.425844e-51 | -8.615850e-47 |
| Msa0705440 | Msa0901100 | 0.814458 | 1.524960e-51 | -8.615850e-47 |
| Msa0705440 | Msa0901140 | 0.805473 | 1.312452e-49 | -8.615850e-47 |
| Msa0705440 | Msa0906720 | 0.816498 | 5.360607e-52 | -8.615850e-47 |
| Msa0705440 | Msa0909710 | 0.806505 | 7.961347e-50 | -8.615850e-47 |
| Msa0705440 | Msa0925160 | 0.820614 | 6.250108e-53 | -8.615850e-47 |
| Msa0705440 | Msa0934830 | 0.823671 | 1.221719e-53 | -8.615850e-47 |
| Msa0705440 | Msa0938970 | 0.816789 | 4.614757e-52 | -8.615850e-47 |
| Msa0705440 | Msa0946650 | 0.844437 | 7.563818e-59 | -8.615850e-47 |
| Msa0705440 | Msa0955260 | 0.826371 | 2.814987e-54 | -8.615850e-47 |
| Msa0705440 | Msa0971860 | 0.810823 | 9.515319e-51 | -8.615850e-47 |
| Msa0705440 | Msa0975080 | 0.814376 | 1.590415e-51 | -8.615850e-47 |
| Msa0705440 | Msa0975910 | 0.808844 | 2.537024e-50 | -8.615850e-47 |
| Msa0705440 | Msa0981740 | 0.822842 | 1.907902e-53 | -8.615850e-47 |
| Msa0705440 | Msa0985430 | 0.810606 | 1.060379e-50 | -8.615850e-47 |
| Msa0705440 | Msa0986620 | 0.802096 | 6.596443e-49 | -8.615850e-47 |
| Msa0705440 | Msa1011210 | 0.825524 | 4.473575e-54 | -8.615850e-47 |
| Msa0705440 | Msa1011240 | 0.808353 | 3.228354e-50 | -8.615850e-47 |
| Msa0705440 | Msa1026720 | 0.802953 | 4.392503e-49 | -8.615850e-47 |
| Msa0705440 | Msa1027790 | 0.805174 | 1.516516e-49 | -8.615850e-47 |
| Msa0705440 | Msa1028460 | 0.816445 | 5.508694e-52 | -8.615850e-47 |
| Msa0705440 | Msa1029320 | 0.859273 | 4.634625e-63 | -8.615850e-47 |
| Msa0705440 | Msa1029430 | 0.816793 | 4.605304e-52 | -8.615850e-47 |
| Msa0705440 | Msa1030430 | 0.816850 | 4.471327e-52 | -8.615850e-47 |
| Msa0705440 | Msa1032140 | 0.800943 | 1.136943e-48 | -8.615850e-47 |
| Msa0705440 | Msa1033790 | 0.844149 | 9.042617e-59 | -8.615850e-47 |
| Msa0705440 | Msa1038320 | 0.812614 | 3.880812e-51 | -8.615850e-47 |
| Msa0705440 | Msa1044040 | 0.816943 | 4.261973e-52 | -8.615850e-47 |
| Msa0705440 | Msa1054890 | 0.827730 | 1.331108e-54 | -8.615850e-47 |
| Msa0705440 | Msa1064210 | 0.803759 | 2.990505e-49 | -8.615850e-47 |
| Msa0705440 | Msa1067430 | 0.819995 | 8.666494e-53 | -8.615850e-47 |
| Msa0705440 | Msa1067710 | 0.802725 | 4.895446e-49 | -8.615850e-47 |
| Msa0705440 | Msa1073840 | 0.800681 | 1.285676e-48 | -8.615850e-47 |
| Msa0705440 | Msa1080460 | 0.814692 | 1.353695e-51 | -8.615850e-47 |
| Msa0705440 | Msa1080620 | 0.866894 | 2.041496e-65 | -8.615850e-47 |
| Msa0705440 | Msa1080690 | 0.864841 | 9.094837e-65 | -8.615850e-47 |
| Msa0705440 | Msa1081700 | 0.819099 | 1.387426e-52 | -8.615850e-47 |
| Msa0705440 | Msa1081850 | 0.818773 | 1.645844e-52 | -8.615850e-47 |
| Msa0705440 | Msa1084490 | 0.842418 | 2.617589e-58 | -8.615850e-47 |
| Msa0705440 | Msa1087500 | 0.805262 | 1.452914e-49 | -8.615850e-47 |
| Msa0705440 | Msa1093390 | 0.804235 | 2.381024e-49 | -8.615850e-47 |
| Msa0705440 | Msa1102540 | 0.807579 | 4.718102e-50 | -8.615850e-47 |
| Msa0705440 | Msa1112610 | 0.805056 | 1.605118e-49 | -8.615850e-47 |
| Msa0705440 | Msa1118140 | 0.811030 | 8.583385e-51 | -8.615850e-47 |
| Msa0705440 | Msa1122510 | 0.800747 | 1.246814e-48 | -8.615850e-47 |
| Msa0705440 | Msa1125780 | 0.844273 | 8.371766e-59 | -8.615850e-47 |
| Msa0705440 | Msa1125950 | 0.846677 | 1.868411e-59 | -8.615850e-47 |
| Msa0705440 | Msa1126310 | 0.820128 | 8.076563e-53 | -8.615850e-47 |
| Msa0705440 | Msa1129720 | 0.805101 | 1.570319e-49 | -8.615850e-47 |
| Msa0705440 | Msa1130730 | 0.810682 | 1.020787e-50 | -8.615850e-47 |
| Msa0705440 | Msa1132820 | 0.819075 | 1.404761e-52 | -8.615850e-47 |
| Msa0705440 | Msa1143630 | 0.999241 | 6.081878e-298 | -8.615850e-47 |
| Msa0705440 | Msa1145370 | 0.862189 | 6.043948e-64 | -8.615850e-47 |
| Msa0705440 | Msa1149760 | 0.801179 | 1.017209e-48 | -8.615850e-47 |
| Msa0705440 | Msa1151120 | 0.800108 | 1.682570e-48 | -8.615850e-47 |
| Msa0705440 | Msa1156210 | 0.824955 | 6.098304e-54 | -8.615850e-47 |
| Msa0705440 | Msa1159100 | 0.803698 | 3.079661e-49 | -8.615850e-47 |
| Msa0705440 | Msa1161160 | 0.800170 | 1.633807e-48 | -8.615850e-47 |
| Msa0705440 | Msa1161760 | 0.820332 | 7.253295e-53 | -8.615850e-47 |
| Msa0705440 | Msa1165810 | 0.806955 | 6.395751e-50 | -8.615850e-47 |
| Msa0705440 | Msa1166180 | 0.826826 | 2.192098e-54 | -8.615850e-47 |
| Msa0705440 | Msa1166280 | 0.827339 | 1.652754e-54 | -8.615850e-47 |
| Msa0705440 | Msa1166970 | 0.821953 | 3.069089e-53 | -8.615850e-47 |
| Msa0705440 | Msa1167160 | 0.843774 | 1.139412e-58 | -8.615850e-47 |
| Msa0705440 | Msa1171340 | 0.843733 | 1.168617e-58 | -8.615850e-47 |
| Msa0705440 | Msa1183730 | 0.823952 | 1.049919e-53 | -8.615850e-47 |
| Msa0705440 | Msa1184580 | 0.802799 | 4.725221e-49 | -8.615850e-47 |
| Msa0705440 | Msa1190910 | 0.812729 | 3.662473e-51 | -8.615850e-47 |
| Msa0705440 | Msa1197110 | 0.808555 | 2.924210e-50 | -8.615850e-47 |
| Msa0705440 | Msa1206560 | 0.821516 | 3.873396e-53 | -8.615850e-47 |
| Msa0705440 | Msa1210640 | 0.803405 | 3.541189e-49 | -8.615850e-47 |
| Msa0705440 | Msa1212740 | 0.805143 | 1.539183e-49 | -8.615850e-47 |
| Msa0705440 | Msa1214900 | 0.808138 | 3.588844e-50 | -8.615850e-47 |
| Msa0705440 | Msa1219250 | 0.810685 | 1.019184e-50 | -8.615850e-47 |
| Msa0705440 | Msa1222580 | 0.827344 | 1.648165e-54 | -8.615850e-47 |
| Msa0705440 | Msa1226600 | 0.828411 | 9.123761e-55 | -8.615850e-47 |
| Msa0705440 | Msa1228950 | 0.801603 | 8.330223e-49 | -8.615850e-47 |
| Msa0705440 | Msa1233770 | 0.814427 | 1.549275e-51 | -8.615850e-47 |
| Msa0705440 | Msa1238700 | 0.840774 | 7.099013e-58 | -8.615850e-47 |
| Msa0705440 | Msa1238730 | 0.827715 | 1.342285e-54 | -8.615850e-47 |
| Msa0705440 | Msa1250670 | 0.814448 | 1.532940e-51 | -8.615850e-47 |
| Msa0705440 | Msa1262310 | 0.826638 | 2.430306e-54 | -8.615850e-47 |
| Msa0705440 | Msa1264560 | 0.837890 | 3.978996e-57 | -8.615850e-47 |
| Msa0705440 | Msa1276080 | 0.813356 | 2.667813e-51 | -8.615850e-47 |
| Msa0705440 | Msa1276840 | 0.812511 | 4.086724e-51 | -8.615850e-47 |
| Msa0705440 | Msa1280120 | 0.811318 | 7.432615e-51 | -8.615850e-47 |
| Msa0705440 | Msa1283770 | 0.800979 | 1.117772e-48 | -8.615850e-47 |
| Msa0705440 | Msa1299160 | 0.813404 | 2.604130e-51 | -8.615850e-47 |
| Msa0705440 | Msa1305520 | 0.830642 | 2.617718e-55 | -8.615850e-47 |
| Msa0705440 | Msa1309100 | 0.852732 | 3.806961e-61 | -8.615850e-47 |
| Msa0705440 | Msa1310110 | 0.821629 | 3.647429e-53 | -8.615850e-47 |
| Msa0705440 | Msa1318180 | 0.801034 | 1.089127e-48 | -8.615850e-47 |
| Msa0705440 | Msa1319580 | 0.816158 | 6.386481e-52 | -8.615850e-47 |
| Msa0705440 | Msa1325980 | 0.822872 | 1.877680e-53 | -8.615850e-47 |
| Msa0705440 | Msa1326000 | 0.841410 | 4.834470e-58 | -8.615850e-47 |
| Msa0705440 | Msa1334650 | 0.801903 | 7.229892e-49 | -8.615850e-47 |
| Msa0705440 | Msa1346110 | 0.926589 | 3.810637e-91 | -8.615850e-47 |
| Msa0705440 | Msa1348240 | 0.828432 | 9.021408e-55 | -8.615850e-47 |
| Msa0705440 | Msa1352290 | 0.804582 | 2.015808e-49 | -8.615850e-47 |
| Msa0705440 | Msa1354040 | 0.809001 | 2.347153e-50 | -8.615850e-47 |
| Msa0705440 | Msa1366620 | 0.808705 | 2.716163e-50 | -8.615850e-47 |
| Msa0705440 | Msa1371840 | 0.827535 | 1.482823e-54 | -8.615850e-47 |
| Msa0705440 | Msa1380720 | 0.819243 | 1.286693e-52 | -8.615850e-47 |
| Msa0705440 | Msa1385900 | 0.801574 | 8.444137e-49 | -8.615850e-47 |
| Msa0705440 | Msa1393010 | 0.801422 | 9.070314e-49 | -8.615850e-47 |
| Msa0705440 | Msa1395640 | 0.801688 | 7.999993e-49 | -8.615850e-47 |
| Msa0705440 | Msa1397110 | 0.813029 | 3.148115e-51 | -8.615850e-47 |
| Msa0705440 | Msa1405770 | 0.803666 | 3.126660e-49 | -8.615850e-47 |
| Msa0705440 | Msa1407710 | 0.803319 | 3.689278e-49 | -8.615850e-47 |
| Msa0705440 | Msa1408190 | 0.805335 | 1.403199e-49 | -8.615850e-47 |
| Msa0705440 | Msa1408770 | 0.809800 | 1.581742e-50 | -8.615850e-47 |
| Msa0705440 | Msa1410170 | 0.822412 | 2.402575e-53 | -8.615850e-47 |
| Msa0705440 | Msa1412520 | 0.847378 | 1.201432e-59 | -8.615850e-47 |
| Msa0705440 | Msa1415250 | 0.817587 | 3.052982e-52 | -8.615850e-47 |
| Msa0705440 | Msa1418200 | 0.864635 | 1.055283e-64 | -8.615850e-47 |
| Msa0705440 | Msa1422500 | 0.815633 | 8.365924e-52 | -8.615850e-47 |
| Msa0705440 | Msa1423190 | 0.815291 | 9.965075e-52 | -8.615850e-47 |
| Msa0705440 | Msa1423230 | 0.802287 | 6.027514e-49 | -8.615850e-47 |
| Msa0705440 | Msa1426290 | 0.812298 | 4.548534e-51 | -8.615850e-47 |
| Msa0705440 | Msa1430760 | 0.825823 | 3.798187e-54 | -8.615850e-47 |
| Msa0705440 | Msa1435470 | 0.809071 | 2.267581e-50 | -8.615850e-47 |
| Msa0705440 | Msa1439800 | 0.811415 | 7.082687e-51 | -8.615850e-47 |
| Msa0705440 | Msa1440180 | 0.825174 | 5.413860e-54 | -8.615850e-47 |
| Msa0705440 | Msa1440980 | 0.829827 | 4.139273e-55 | -8.615850e-47 |
| Msa0705440 | Msa1442030 | 0.838264 | 3.188007e-57 | -8.615850e-47 |
| Msa0705440 | Msa1448990 | 0.807011 | 6.225349e-50 | -8.615850e-47 |
| Msa0705440 | Msa1449600 | 0.810512 | 1.110909e-50 | -8.615850e-47 |
| Msa0705440 | Msa1449740 | 0.825642 | 4.193706e-54 | -8.615850e-47 |
| Msa0705440 | Msa1456810 | 0.823485 | 1.350787e-53 | -8.615850e-47 |
| Msa0705440 | Msa1458330 | 0.812569 | 3.969257e-51 | -8.615850e-47 |
| Msa0705440 | Msa1458920 | 0.826792 | 2.233481e-54 | -8.615850e-47 |
| Msa0705440 | Msa1464560 | 0.813278 | 2.775421e-51 | -8.615850e-47 |
| Msa0125230 | Msa0705440 | 0.824722 | 6.920426e-54 | -8.615850e-47 |
| Msa0125440 | Msa0705440 | 0.802563 | 5.287468e-49 | -8.615850e-47 |
| Msa0130800 | Msa0705440 | 0.860361 | 2.178900e-63 | -8.615850e-47 |
| Msa0135980 | Msa0705440 | 0.805804 | 1.118683e-49 | -8.615850e-47 |
| Msa0137600 | Msa0705440 | 0.827374 | 1.620897e-54 | -8.615850e-47 |
| Msa0139050 | Msa0705440 | 0.806763 | 7.025630e-50 | -8.615850e-47 |
| Msa0146110 | Msa0705440 | 0.801340 | 9.431825e-49 | -8.615850e-47 |
| Msa0147550 | Msa0705440 | 0.820605 | 6.278512e-53 | -8.615850e-47 |
| Msa0149500 | Msa0705440 | 0.829493 | 4.990703e-55 | -8.615850e-47 |
| Msa0153640 | Msa0705440 | 0.839984 | 1.142569e-57 | -8.615850e-47 |
| Msa0157020 | Msa0705440 | 0.805280 | 1.440560e-49 | -8.615850e-47 |
| Msa0157350 | Msa0705440 | 0.810927 | 9.034407e-51 | -8.615850e-47 |
| Msa0159750 | Msa0705440 | 0.811500 | 6.787525e-51 | -8.615850e-47 |
| Msa0162030 | Msa0705440 | 0.806397 | 8.389639e-50 | -8.615850e-47 |
| Msa0162070 | Msa0705440 | 0.801183 | 1.015593e-48 | -8.615850e-47 |
| Msa0168900 | Msa0705440 | 0.802551 | 5.316710e-49 | -8.615850e-47 |
| Msa0170680 | Msa0705440 | 0.808636 | 2.809547e-50 | -8.615850e-47 |
| Msa0171780 | Msa0705440 | 0.803395 | 3.558253e-49 | -8.615850e-47 |
| Msa0171920 | Msa0705440 | 0.813545 | 2.424944e-51 | -8.615850e-47 |
| Msa0173280 | Msa0705440 | 0.812031 | 5.201329e-51 | -8.615850e-47 |
| Msa0173760 | Msa0705440 | 0.864943 | 8.446851e-65 | -8.615850e-47 |
| Msa0173850 | Msa0705440 | 0.853704 | 2.003988e-61 | -8.615850e-47 |
| Msa0175530 | Msa0705440 | 0.811118 | 8.214724e-51 | -8.615850e-47 |
| Msa0176710 | Msa0705440 | 0.808521 | 2.973320e-50 | -8.615850e-47 |
| Msa0178940 | Msa0705440 | 0.817166 | 3.795863e-52 | -8.615850e-47 |
| Msa0181020 | Msa0705440 | 0.824340 | 8.511102e-54 | -8.615850e-47 |
| Msa0183610 | Msa0705440 | 0.811151 | 8.081534e-51 | -8.615850e-47 |
| Msa0183620 | Msa0705440 | 0.802205 | 6.265966e-49 | -8.615850e-47 |
| Msa0185390 | Msa0705440 | 0.801992 | 6.930496e-49 | -8.615850e-47 |
| Msa0185950 | Msa0705440 | 0.815812 | 7.631100e-52 | -8.615850e-47 |
| Msa0194570 | Msa0705440 | 0.813940 | 1.984097e-51 | -8.615850e-47 |
| Msa0206940 | Msa0705440 | 0.876105 | 1.819234e-68 | -8.615850e-47 |
| Msa0207180 | Msa0705440 | 0.801541 | 8.575477e-49 | -8.615850e-47 |
| Msa0213080 | Msa0705440 | 0.807552 | 4.779886e-50 | -8.615850e-47 |
| Msa0217470 | Msa0705440 | 0.816893 | 4.371696e-52 | -8.615850e-47 |
| Msa0226800 | Msa0705440 | 0.806570 | 7.714645e-50 | -8.615850e-47 |
| Msa0236330 | Msa0705440 | 0.824103 | 9.675609e-54 | -8.615850e-47 |
| Msa0367370 | Msa0705440 | 0.836007 | 1.203870e-56 | -8.615850e-47 |
| Msa0373130 | Msa0705440 | 0.843486 | 1.360412e-58 | -8.615850e-47 |
| Msa0376510 | Msa0705440 | 0.808569 | 2.903606e-50 | -8.615850e-47 |
| Msa0380360 | Msa0705440 | 0.812119 | 4.976150e-51 | -8.615850e-47 |
| Msa0380650 | Msa0705440 | 0.834293 | 3.258715e-56 | -8.615850e-47 |
| Msa0382500 | Msa0705440 | 0.812954 | 3.268439e-51 | -8.615850e-47 |
| Msa0387790 | Msa0705440 | 0.859387 | 4.284420e-63 | -8.615850e-47 |
| Msa0396970 | Msa0705440 | 0.822530 | 2.255317e-53 | -8.615850e-47 |
| Msa0397000 | Msa0705440 | 0.803437 | 3.487447e-49 | -8.615850e-47 |
| Msa0400900 | Msa0705440 | 0.816172 | 6.341282e-52 | -8.615850e-47 |
| Msa0411280 | Msa0705440 | 0.801558 | 8.507906e-49 | -8.615850e-47 |
| Msa0413180 | Msa0705440 | 0.802638 | 5.102963e-49 | -8.615850e-47 |
| Msa0413740 | Msa0705440 | 0.823846 | 1.111573e-53 | -8.615850e-47 |
| Msa0415050 | Msa0705440 | 0.815915 | 7.236237e-52 | -8.615850e-47 |
| Msa0415930 | Msa0705440 | 0.814026 | 1.899991e-51 | -8.615850e-47 |
| Msa0423110 | Msa0705440 | 0.819706 | 1.008726e-52 | -8.615850e-47 |
| Msa0425050 | Msa0705440 | 0.812180 | 4.826220e-51 | -8.615850e-47 |
| Msa0427090 | Msa0705440 | 0.805436 | 1.335986e-49 | -8.615850e-47 |
| Msa0430290 | Msa0705440 | 0.834038 | 3.776808e-56 | -8.615850e-47 |
| Msa0432680 | Msa0705440 | 0.828961 | 6.720158e-55 | -8.615850e-47 |
| Msa0458790 | Msa0705440 | 0.813856 | 2.070955e-51 | -8.615850e-47 |
| Msa0467080 | Msa0705440 | 0.813386 | 2.627781e-51 | -8.615850e-47 |
| Msa0470030 | Msa0705440 | 0.834144 | 3.551891e-56 | -8.615850e-47 |
| Msa0471890 | Msa0705440 | 0.815716 | 8.015401e-52 | -8.615850e-47 |
| Msa0473490 | Msa0705440 | 0.801652 | 8.139144e-49 | -8.615850e-47 |
| Msa0476180 | Msa0705440 | 0.818532 | 1.865897e-52 | -8.615850e-47 |
| Msa0480150 | Msa0705440 | 0.824553 | 7.585273e-54 | -8.615850e-47 |
| Msa0242290 | Msa0705440 | 0.830164 | 3.426385e-55 | -8.615850e-47 |
| Msa0250520 | Msa0705440 | 0.854875 | 9.194886e-62 | -8.615850e-47 |
| Msa0255990 | Msa0705440 | 0.806236 | 9.071574e-50 | -8.615850e-47 |
| Msa0258380 | Msa0705440 | 0.801735 | 7.825776e-49 | -8.615850e-47 |
| Msa0280140 | Msa0705440 | 0.824736 | 6.865382e-54 | -8.615850e-47 |
| Msa0285740 | Msa0705440 | 0.817721 | 2.847256e-52 | -8.615850e-47 |
| Msa0296610 | Msa0705440 | 0.832933 | 7.124757e-56 | -8.615850e-47 |
| Msa0298940 | Msa0705440 | 0.817788 | 2.750139e-52 | -8.615850e-47 |
| Msa0298970 | Msa0705440 | 0.824852 | 6.446774e-54 | -8.615850e-47 |
| Msa0311570 | Msa0705440 | 0.812416 | 4.285653e-51 | -8.615850e-47 |
| Msa0313800 | Msa0705440 | 0.818178 | 2.244110e-52 | -8.615850e-47 |
| Msa0315480 | Msa0705440 | 0.804486 | 2.111466e-49 | -8.615850e-47 |
| Msa0317260 | Msa0705440 | 0.800319 | 1.524161e-48 | -8.615850e-47 |
| Msa0323990 | Msa0705440 | 0.800799 | 1.216352e-48 | -8.615850e-47 |
| Msa0334980 | Msa0705440 | 0.822273 | 2.586689e-53 | -8.615850e-47 |
| Msa0350020 | Msa0705440 | 0.815049 | 1.127853e-51 | -8.615850e-47 |
| Msa0352510 | Msa0705440 | 0.834892 | 2.304155e-56 | -8.615850e-47 |
| Msa0482960 | Msa0705440 | 0.832550 | 8.866746e-56 | -8.615850e-47 |
| Msa0485280 | Msa0705440 | 0.821687 | 3.535962e-53 | -8.615850e-47 |
| Msa0505390 | Msa0705440 | 0.823194 | 1.579065e-53 | -8.615850e-47 |
| Msa0512310 | Msa0705440 | 0.862012 | 6.847482e-64 | -8.615850e-47 |
| Msa0516450 | Msa0705440 | 0.827520 | 1.495437e-54 | -8.615850e-47 |
| Msa0524050 | Msa0705440 | 0.816900 | 4.356417e-52 | -8.615850e-47 |
| Msa0524090 | Msa0705440 | 0.804045 | 2.608175e-49 | -8.615850e-47 |
| Msa0524120 | Msa0705440 | 0.803885 | 2.815696e-49 | -8.615850e-47 |
| Msa0528740 | Msa0705440 | 0.861009 | 1.386214e-63 | -8.615850e-47 |
| Msa0530930 | Msa0705440 | 0.810435 | 1.154303e-50 | -8.615850e-47 |
| Msa0532840 | Msa0705440 | 0.812457 | 4.198362e-51 | -8.615850e-47 |
| Msa0533010 | Msa0705440 | 0.806396 | 8.396142e-50 | -8.615850e-47 |
| Msa0539320 | Msa0705440 | 0.801636 | 8.201716e-49 | -8.615850e-47 |
| Msa0540320 | Msa0705440 | 0.805563 | 1.256977e-49 | -8.615850e-47 |
| Msa0542040 | Msa0705440 | 0.805714 | 1.168436e-49 | -8.615850e-47 |
| Msa0546380 | Msa0705440 | 0.803079 | 4.135684e-49 | -8.615850e-47 |
| Msa0546740 | Msa0705440 | 0.805528 | 1.278298e-49 | -8.615850e-47 |
| Msa0550110 | Msa0705440 | 0.850492 | 1.639372e-60 | -8.615850e-47 |
| Msa0553350 | Msa0705440 | 0.803290 | 3.741629e-49 | -8.615850e-47 |
| Msa0563530 | Msa0705440 | 0.808166 | 3.539798e-50 | -8.615850e-47 |
| Msa0576420 | Msa0705440 | 0.824306 | 8.670019e-54 | -8.615850e-47 |
| Msa0577230 | Msa0705440 | 0.829925 | 3.917322e-55 | -8.615850e-47 |
| Msa0579610 | Msa0705440 | 0.844060 | 9.548761e-59 | -8.615850e-47 |
| Msa0581460 | Msa0705440 | 0.802348 | 5.853705e-49 | -8.615850e-47 |
| Msa0582110 | Msa0705440 | 0.813903 | 2.022518e-51 | -8.615850e-47 |
| Msa0587900 | Msa0705440 | 0.833480 | 5.206872e-56 | -8.615850e-47 |
| Msa0589150 | Msa0705440 | 0.807856 | 4.120195e-50 | -8.615850e-47 |
| Msa0589290 | Msa0705440 | 0.829954 | 3.855465e-55 | -8.615850e-47 |
| Msa0589600 | Msa0705440 | 0.808350 | 3.234349e-50 | -8.615850e-47 |
| Msa0589640 | Msa0705440 | 0.812051 | 5.148545e-51 | -8.615850e-47 |
| Msa0596100 | Msa0705440 | 0.821283 | 4.383998e-53 | -8.615850e-47 |
| Msa0598250 | Msa0705440 | 0.814041 | 1.885357e-51 | -8.615850e-47 |
| Msa0600390 | Msa0705440 | 0.804796 | 1.818519e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0705440 | MtrunA17_Chr8g0384081 | 89.241 | 158 | 13 | 2 | 1 | 158 | 1 | 154 | 5.98e-81 | 242 |
| Msa0705440 | MtrunA17_Chr1g0179531 | 51.948 | 77 | 37 | 0 | 82 | 158 | 269 | 345 | 4.38e-21 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0705440 | AT3G18680.1 | 83.333 | 84 | 12 | 1 | 77 | 158 | 85 | 168 | 8.52e-43 | 145 |
| Msa0705440 | AT3G18680.2 | 83.333 | 84 | 12 | 1 | 77 | 158 | 85 | 168 | 1.01e-42 | 145 |
| Msa0705440 | AT3G10030.2 | 55.844 | 77 | 34 | 0 | 81 | 157 | 297 | 373 | 7.82e-22 | 91.3 |
| Msa0705440 | AT3G10030.1 | 55.844 | 77 | 34 | 0 | 81 | 157 | 297 | 373 | 8.33e-22 | 91.3 |
Find 116 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAAAACCCTTCTCCATTT+TGG | 0.146176 | 4_4:-78098093 | None:intergenic |
| CCCCTGATGCCTTCAATTCC+AGG | 0.190673 | 4_4:+78097916 | Msa0705440:CDS |
| TTTAGGCAACAGAGGATATT+TGG | 0.193820 | 4_4:-78099818 | None:intergenic |
| AAAATAATGCACCTCCATTT+TGG | 0.219123 | 4_4:-78100812 | None:intergenic |
| GCCAACTCTCTCACCTTTAA+TGG | 0.225362 | 4_4:-78100674 | None:intergenic |
| GAGCAGTATATATACAAATT+TGG | 0.230836 | 4_4:+78099634 | Msa0705440:three_prime_UTR |
| TTCTTGGCTAAAAGAGATTA+AGG | 0.242093 | 4_4:-78099549 | None:intergenic |
| ATGAAGATTAAAGGTATTCT+TGG | 0.280442 | 4_4:-78099565 | None:intergenic |
| GAGAGAGTTGGCACTTTGAT+TGG | 0.297652 | 4_4:+78100685 | Msa0705440:three_prime_UTR |
| CGCTCTTCTTATTCCGGAAA+TGG | 0.304042 | 4_4:+78097888 | Msa0705440:CDS |
| CAAGATGGCAAGATAAAATT+AGG | 0.307993 | 4_4:-78100948 | None:intergenic |
| TACACTTAGACAAAAGTTTA+CGG | 0.318941 | 4_4:-78099766 | None:intergenic |
| AGGAAGGGAAGAAGAGAAAG+AGG | 0.328454 | 4_4:+78097708 | Msa0705440:five_prime_UTR |
| CGCTCATCTGCTGATTATAT+TGG | 0.329732 | 4_4:+78099516 | Msa0705440:CDS |
| ATGAATCTAGTAAGCCAAAA+TGG | 0.334137 | 4_4:+78098079 | Msa0705440:CDS |
| TCCAGCTGAGGATGCCAAAA+TGG | 0.336098 | 4_4:+78100798 | Msa0705440:three_prime_UTR |
| AACATAGAGAAGGCCATTAA+AGG | 0.337991 | 4_4:+78100661 | Msa0705440:three_prime_UTR |
| AGTAGAAGTGAAAGCGTAAT+AGG | 0.341402 | 4_4:+78097688 | Msa0705440:five_prime_UTR |
| TTCCGTGGAGCCTCGTGGGC+TGG | 0.355160 | 4_4:+78099477 | Msa0705440:CDS |
| TACTAAATGCAGGAAATTGC+AGG | 0.356000 | 4_4:-78099676 | None:intergenic |
| TGTCAAGAAAATAATATTCC+TGG | 0.362510 | 4_4:+78100488 | Msa0705440:three_prime_UTR |
| CGCGCTTGAGGGTTACGCTT+TGG | 0.368748 | 4_4:-78100389 | None:intergenic |
| AGAGAGTTGGCACTTTGATT+GGG | 0.369637 | 4_4:+78100686 | Msa0705440:three_prime_UTR |
| GAGAAAGAATCACTTGTAAT+TGG | 0.370269 | 4_4:-78100755 | None:intergenic |
| ACTATTCGCTCTTCTTATTC+CGG | 0.373416 | 4_4:+78097882 | Msa0705440:CDS |
| AACCTGGAATTGAAGGCATC+AGG | 0.382214 | 4_4:-78097918 | None:intergenic |
| CAGAAGGGCTGTGAGGCATT+TGG | 0.389622 | 4_4:+78100021 | Msa0705440:three_prime_UTR |
| CTCAAAGCTACAAATGTTGA+TGG | 0.395632 | 4_4:+78100350 | Msa0705440:three_prime_UTR |
| TATTTGCCATCCACGTGGTT+TGG | 0.399529 | 4_4:+78100925 | Msa0705440:three_prime_UTR |
| TCTTGATACACTAACCTATC+AGG | 0.400311 | 4_4:+78100415 | Msa0705440:three_prime_UTR |
| ATCAGGGGAAGAACCATTTC+CGG | 0.405657 | 4_4:-78097901 | None:intergenic |
| AGGTTGCACTAGTTGTTGGT+GGG | 0.406958 | 4_4:+78099445 | Msa0705440:intron |
| GGAAGAAGAGAAAGAGGGTT+TGG | 0.414374 | 4_4:+78097714 | Msa0705440:five_prime_UTR |
| TGACAGTGCAAACGGAGATA+TGG | 0.416468 | 4_4:-78098052 | None:intergenic |
| ACAGCCCTTCTGCGTATATA+CGG | 0.417983 | 4_4:-78100010 | None:intergenic |
| AATGCAGTTTGTACTCTAGT+TGG | 0.432080 | 4_4:-78099965 | None:intergenic |
| GTTTGGCGGCAGCAGCATAA+TGG | 0.438289 | 4_4:+78097731 | Msa0705440:exon |
| TGACTTCTCAACCCTGGTAG+TGG | 0.439432 | 4_4:+78101004 | Msa0705440:three_prime_UTR |
| GCTCATCTGCTGATTATATT+GGG | 0.440239 | 4_4:+78099517 | Msa0705440:CDS |
| TGATTTATCGTGTAGGATGC+TGG | 0.449284 | 4_4:+78099889 | Msa0705440:three_prime_UTR |
| GAAATAATGAAGTGCGAGAA+GGG | 0.451481 | 4_4:-78097839 | None:intergenic |
| CAGGTTGCACTAGTTGTTGG+TGG | 0.453785 | 4_4:+78099444 | Msa0705440:intron |
| GAAGTGAAAGCGTAATAGGA+AGG | 0.456433 | 4_4:+78097692 | Msa0705440:five_prime_UTR |
| TTTCAGGTTGCACTAGTTGT+TGG | 0.459501 | 4_4:+78099441 | Msa0705440:intron |
| GATAAGGTGGAGGAGAATAG+AGG | 0.465090 | 4_4:-78097765 | None:intergenic |
| ATGGCCTTCTCTATGTTACC+TGG | 0.476740 | 4_4:-78100655 | None:intergenic |
| AATGTAATGGAGCCACTACC+AGG | 0.477038 | 4_4:-78101016 | None:intergenic |
| TCTTGGCTAAAAGAGATTAA+GGG | 0.483300 | 4_4:-78099548 | None:intergenic |
| GTTAGCGGAGAAGCACTTGC+TGG | 0.485759 | 4_4:+78098120 | Msa0705440:CDS |
| GGTTGCACTAGTTGTTGGTG+GGG | 0.491388 | 4_4:+78099446 | Msa0705440:intron |
| CGAAATAATGAAGTGCGAGA+AGG | 0.493787 | 4_4:-78097840 | None:intergenic |
| TCATTCATTGACAGTGCAAA+CGG | 0.494942 | 4_4:-78098060 | None:intergenic |
| CAAAATCTGTAAATATAACT+AGG | 0.499278 | 4_4:+78100878 | Msa0705440:three_prime_UTR |
| GTCACGAGAGACAAAACGTT+GGG | 0.509202 | 4_4:+78099707 | Msa0705440:three_prime_UTR |
| GACACAAAGTTATGGCAGTA+AGG | 0.512526 | 4_4:-78100469 | None:intergenic |
| GCTGTGAGGCATTTGGAGAA+AGG | 0.516252 | 4_4:+78100028 | Msa0705440:three_prime_UTR |
| TATCAAGAAGCCGCGCTTGA+GGG | 0.517581 | 4_4:-78100400 | None:intergenic |
| ACCTGGAATTGAAGGCATCA+GGG | 0.520382 | 4_4:-78097917 | None:intergenic |
| AGCTCAGAATATTGACCCTA+AGG | 0.522546 | 4_4:+78098149 | Msa0705440:CDS |
| CATCTTCCGTGGAGCCTCGT+GGG | 0.524475 | 4_4:+78099473 | Msa0705440:CDS |
| TGAGGCATTTGGAGAAAGGA+AGG | 0.528380 | 4_4:+78100032 | Msa0705440:three_prime_UTR |
| CAAGCAACAATGGAGAGTAT+TGG | 0.530508 | 4_4:+78099938 | Msa0705440:three_prime_UTR |
| AGCTGCCACTTCCCTTGCAA+TGG | 0.532682 | 4_4:-78099076 | None:intergenic |
| GTTGCACTAGTTGTTGGTGG+GGG | 0.534947 | 4_4:+78099447 | Msa0705440:CDS |
| GCCTCGTGGGCTGGAAGTAG+TGG | 0.535611 | 4_4:+78099486 | Msa0705440:CDS |
| AGAAGAAGAAGATAAGGTGG+AGG | 0.535808 | 4_4:-78097775 | None:intergenic |
| GGAAGGGAAGAAGAGAAAGA+GGG | 0.536077 | 4_4:+78097709 | Msa0705440:five_prime_UTR |
| TATGTCCATTGCAAGGGAAG+TGG | 0.540950 | 4_4:+78099071 | Msa0705440:CDS |
| CTAGTAAGCCAAAATGGAGA+AGG | 0.541861 | 4_4:+78098085 | Msa0705440:CDS |
| GGAGTTGAGTGCTAATGTAA+TGG | 0.544063 | 4_4:-78101029 | None:intergenic |
| AACAAAAGATCTGTCAGTGA+TGG | 0.552161 | 4_4:+78100445 | Msa0705440:three_prime_UTR |
| TTGTATTTGATTTATCGTGT+AGG | 0.555193 | 4_4:+78099882 | Msa0705440:three_prime_UTR |
| AGTCACCTCAATGCCATGGC+GGG | 0.556629 | 4_4:-78099103 | None:intergenic |
| ATATATAAAACCACACAAGA+TGG | 0.556692 | 4_4:-78100963 | None:intergenic |
| AGAAGAGAAAGAGGGTTTGG+CGG | 0.557746 | 4_4:+78097717 | Msa0705440:five_prime_UTR |
| CAAAACGTTGGGTGTGTATG+TGG | 0.561975 | 4_4:+78099718 | Msa0705440:three_prime_UTR |
| ACATCTTCCGTGGAGCCTCG+TGG | 0.568791 | 4_4:+78099472 | Msa0705440:CDS |
| GTTATGCAATCTTCCAGCTG+AGG | 0.573018 | 4_4:+78100786 | Msa0705440:three_prime_UTR |
| TTCCAGCCCACGAGGCTCCA+CGG | 0.573341 | 4_4:-78099479 | None:intergenic |
| AAGTGAAAGCGTAATAGGAA+GGG | 0.573559 | 4_4:+78097693 | Msa0705440:five_prime_UTR |
| GAGAGTTGGCACTTTGATTG+GGG | 0.578321 | 4_4:+78100687 | Msa0705440:three_prime_UTR |
| AACTGCATTTCGCATGTCTG+AGG | 0.580501 | 4_4:+78099979 | Msa0705440:three_prime_UTR |
| GCCATTAAAGGTGAGAGAGT+TGG | 0.582841 | 4_4:+78100673 | Msa0705440:three_prime_UTR |
| GCAGTGTCTGTGGTAAAGAA+TGG | 0.584543 | 4_4:-78100085 | None:intergenic |
| GTATCAAGAAGCCGCGCTTG+AGG | 0.587429 | 4_4:-78100401 | None:intergenic |
| ATTAGGCCAAACCACGTGGA+TGG | 0.587448 | 4_4:-78100931 | None:intergenic |
| CAGAACCGTATATACGCAGA+AGG | 0.587562 | 4_4:+78100005 | Msa0705440:three_prime_UTR |
| CCTGGAATTGAAGGCATCAG+GGG | 0.588255 | 4_4:-78097916 | None:intergenic |
| AGGTAACTATGTCCATTGCA+AGG | 0.590385 | 4_4:+78099064 | Msa0705440:intron |
| GTGGCAGCTGTAACCCGCCA+TGG | 0.592749 | 4_4:+78099090 | Msa0705440:CDS |
| TTACAAGTGATTCTTTCTCG+TGG | 0.599326 | 4_4:+78100759 | Msa0705440:three_prime_UTR |
| ATAAGAAGAGCGAATAGTGA+AGG | 0.604127 | 4_4:-78097877 | None:intergenic |
| TATATTTCTTCAAGCAACAA+TGG | 0.604226 | 4_4:+78099928 | Msa0705440:three_prime_UTR |
| AAGTGCTGCGGCAGTGTCTG+TGG | 0.607764 | 4_4:-78100095 | None:intergenic |
| TAGTAAGCCAAAATGGAGAA+GGG | 0.608078 | 4_4:+78098086 | Msa0705440:CDS |
| GGTAACTATGTCCATTGCAA+GGG | 0.611344 | 4_4:+78099065 | Msa0705440:intron |
| ATTACATTAGCACTCAACTC+CGG | 0.611534 | 4_4:+78101031 | Msa0705440:three_prime_UTR |
| CAAACCAGGTAACATAGAGA+AGG | 0.618925 | 4_4:+78100651 | Msa0705440:three_prime_UTR |
| TGTAACCCGCCATGGCATTG+AGG | 0.619412 | 4_4:+78099098 | Msa0705440:CDS |
| GTGTAGTCACCTCAATGCCA+TGG | 0.622683 | 4_4:-78099107 | None:intergenic |
| AAATAATGAAGTGCGAGAAG+GGG | 0.626409 | 4_4:-78097838 | None:intergenic |
| GAGGCATTTGGAGAAAGGAA+GGG | 0.627211 | 4_4:+78100033 | Msa0705440:three_prime_UTR |
| TTCTGCACATCTAAGTGCTG+CGG | 0.632064 | 4_4:-78100107 | None:intergenic |
| AGTGCAAACGGAGATATGGA+TGG | 0.633359 | 4_4:-78098048 | None:intergenic |
| AGCTGAGGATGCCAAAATGG+AGG | 0.651978 | 4_4:+78100801 | Msa0705440:three_prime_UTR |
| GCACTTTGATTGGGGCAACG+TGG | 0.653598 | 4_4:+78100695 | Msa0705440:three_prime_UTR |
| GTCTTCAATCTAAACAAACC+AGG | 0.655408 | 4_4:+78100637 | Msa0705440:three_prime_UTR |
| CAATATAATCAGCAGATGAG+CGG | 0.655659 | 4_4:-78099515 | None:intergenic |
| TAAAATTAGGCCAAACCACG+TGG | 0.657171 | 4_4:-78100935 | None:intergenic |
| ACCACTACTTCCAGCCCACG+AGG | 0.679613 | 4_4:-78099487 | None:intergenic |
| ATGTAATGGAGCCACTACCA+GGG | 0.690330 | 4_4:-78101015 | None:intergenic |
| TAGTCACCTCAATGCCATGG+CGG | 0.694102 | 4_4:-78099104 | None:intergenic |
| AGAACCGTATATACGCAGAA+GGG | 0.702130 | 4_4:+78100006 | Msa0705440:three_prime_UTR |
| CAAAGCGTAACCCTCAAGCG+CGG | 0.708280 | 4_4:+78100390 | Msa0705440:three_prime_UTR |
| TGTCACGAGAGACAAAACGT+TGG | 0.721287 | 4_4:+78099706 | Msa0705440:three_prime_UTR |
| ATATACGCAGAAGGGCTGTG+AGG | 0.766075 | 4_4:+78100014 | Msa0705440:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAGATATAAATTGC+AGG | - | chr4_4:78098182-78098201 | None:intergenic | 15.0% |
| !!! | AGACAATTTTTTATTAATAC+AGG | - | chr4_4:78098385-78098404 | None:intergenic | 15.0% |
| !! | AGAAAATATAAAGATAAAAC+TGG | + | chr4_4:78098922-78098941 | Msa0705440:intron | 15.0% |
| !!! | AAAATGCTAAATTTTTACTT+TGG | + | chr4_4:78099790-78099809 | Msa0705440:three_prime_UTR | 15.0% |
| !!! | AAATGCTAAATTTTTACTTT+GGG | + | chr4_4:78099791-78099810 | Msa0705440:three_prime_UTR | 15.0% |
| !!! | ACATTGTATTAAACATTTTT+AGG | - | chr4_4:78099838-78099857 | None:intergenic | 15.0% |
| !!! | TGATTACACAGTTAATTTTT+CGG | + | chr4_4:78098413-78098432 | Msa0705440:intron | 20.0% |
| !!! | AAACTGGTAATAAACAATTT+TGG | + | chr4_4:78098938-78098957 | Msa0705440:intron | 20.0% |
| !!! | AACTGGTAATAAACAATTTT+GGG | + | chr4_4:78098939-78098958 | Msa0705440:intron | 20.0% |
| !!! | AGATTTTGATTTTGTTTTTG+TGG | + | chr4_4:78099031-78099050 | Msa0705440:intron | 20.0% |
| !!! | GATTTTGATTTTGTTTTTGT+GGG | + | chr4_4:78099032-78099051 | Msa0705440:intron | 20.0% |
| !! | TACTTTGCAATATAATCTTT+AGG | + | chr4_4:78099269-78099288 | Msa0705440:intron | 20.0% |
| !! | ACTTTGCAATATAATCTTTA+GGG | + | chr4_4:78099270-78099289 | Msa0705440:intron | 20.0% |
| !!! | AAGTTTTGAATGAAGATTAA+AGG | - | chr4_4:78099577-78099596 | None:intergenic | 20.0% |
| !!! | AATGCTAAATTTTTACTTTG+GGG | + | chr4_4:78099792-78099811 | Msa0705440:three_prime_UTR | 20.0% |
| !! | AAATACAATTACAAAAAAGC+AGG | - | chr4_4:78099870-78099889 | None:intergenic | 20.0% |
| !! | AAAACTATAAACTAATGAAC+AGG | - | chr4_4:78100243-78100262 | None:intergenic | 20.0% |
| !! | AAGTAAATAGCAATAAATAC+CGG | - | chr4_4:78100300-78100319 | None:intergenic | 20.0% |
| !! | CAAAATCTGTAAATATAACT+AGG | + | chr4_4:78100878-78100897 | Msa0705440:three_prime_UTR | 20.0% |
| !!! | CTTTTTTTCAATGTATGTTA+TGG | + | chr4_4:78101056-78101075 | Msa0705440:three_prime_UTR | 20.0% |
| ! | TGAAAATTAGATGAAAAACC+TGG | - | chr4_4:78097937-78097956 | None:intergenic | 25.0% |
| ! | CTAAACCATAGTAAATTAAC+AGG | - | chr4_4:78097989-78098008 | None:intergenic | 25.0% |
| ! | TGATTAATTGAATTGTTGAC+AGG | + | chr4_4:78098010-78098029 | Msa0705440:intron | 25.0% |
| !!! | TACTTTCAGCATTAGTTTTT+TGG | + | chr4_4:78098359-78098378 | Msa0705440:intron | 25.0% |
| ! | ACTTTGCTCTAACTTTAAAT+AGG | + | chr4_4:78098553-78098572 | Msa0705440:intron | 25.0% |
| ! | CTTTGCTCTAACTTTAAATA+GGG | + | chr4_4:78098554-78098573 | Msa0705440:intron | 25.0% |
| ! | TAAAAAGTGAGATGAAATCT+GGG | - | chr4_4:78098889-78098908 | None:intergenic | 25.0% |
| ! | ATAAAAAGTGAGATGAAATC+TGG | - | chr4_4:78098890-78098909 | None:intergenic | 25.0% |
| ! | ATATGGCAAGATATTTCATT+TGG | - | chr4_4:78098986-78099005 | None:intergenic | 25.0% |
| !!! | ATTTTTTCACTAGTTTCCTT+CGG | + | chr4_4:78099141-78099160 | Msa0705440:intron | 25.0% |
| ! | ACTACAAAAAATAAAACCGA+AGG | - | chr4_4:78099160-78099179 | None:intergenic | 25.0% |
| ! | CTTTGCAATATAATCTTTAG+GGG | + | chr4_4:78099271-78099290 | Msa0705440:intron | 25.0% |
| !! | TTGAATCATTTCAAGTCAAA+GGG | - | chr4_4:78099373-78099392 | None:intergenic | 25.0% |
| !! | ATTGAATCATTTCAAGTCAA+AGG | - | chr4_4:78099374-78099393 | None:intergenic | 25.0% |
| !!! | AATGATTCAATGCTTTTTAC+TGG | + | chr4_4:78099383-78099402 | Msa0705440:intron | 25.0% |
| !! | ACAGTTTGGTTTATAATGAT+TGG | + | chr4_4:78099411-78099430 | Msa0705440:intron | 25.0% |
| !! | CAGTTTGGTTTATAATGATT+GGG | + | chr4_4:78099412-78099431 | Msa0705440:intron | 25.0% |
| !!! | ATGAAGATTAAAGGTATTCT+TGG | - | chr4_4:78099568-78099587 | None:intergenic | 25.0% |
| ! | GAGCAGTATATATACAAATT+TGG | + | chr4_4:78099634-78099653 | Msa0705440:three_prime_UTR | 25.0% |
| !! | ACAAACTTTTTACTAAATGC+AGG | - | chr4_4:78099689-78099708 | None:intergenic | 25.0% |
| ! | TACACTTAGACAAAAGTTTA+CGG | - | chr4_4:78099769-78099788 | None:intergenic | 25.0% |
| !! | TTGTATTTGATTTATCGTGT+AGG | + | chr4_4:78099882-78099901 | Msa0705440:three_prime_UTR | 25.0% |
| ! | TATATTTCTTCAAGCAACAA+TGG | + | chr4_4:78099928-78099947 | Msa0705440:three_prime_UTR | 25.0% |
| !!! | TTTTGTTATTACATCCTGAT+AGG | - | chr4_4:78100432-78100451 | None:intergenic | 25.0% |
| !! | ATTTTCTTGACACAAAGTTA+TGG | - | chr4_4:78100480-78100499 | None:intergenic | 25.0% |
| ! | TGTCAAGAAAATAATATTCC+TGG | + | chr4_4:78100488-78100507 | Msa0705440:three_prime_UTR | 25.0% |
| ! | ATCAGGACAATAAATACAAT+AGG | - | chr4_4:78100583-78100602 | None:intergenic | 25.0% |
| !! | ATATTTTCACGTTCTTGATA+TGG | - | chr4_4:78100728-78100747 | None:intergenic | 25.0% |
| ! | ATATATAAAACCACACAAGA+TGG | - | chr4_4:78100966-78100985 | None:intergenic | 25.0% |
| ! | CATACATTGAAAAAAAGAAC+CGG | - | chr4_4:78101053-78101072 | None:intergenic | 25.0% |
| AGAAGAAGAAGAAGAAGATA+AGG | - | chr4_4:78097784-78097803 | None:intergenic | 30.0% | |
| GGCATGAAGGATAAATAAAA+AGG | - | chr4_4:78097960-78097979 | None:intergenic | 30.0% | |
| TAGTAAATTAACAGGAACGA+AGG | - | chr4_4:78097981-78098000 | None:intergenic | 30.0% | |
| TCGTTCCTGTTAATTTACTA+TGG | + | chr4_4:78097981-78098000 | Msa0705440:intron | 30.0% | |
| ATGAATCTAGTAAGCCAAAA+TGG | + | chr4_4:78098079-78098098 | Msa0705440:CDS | 30.0% | |
| CAATATTGTAACTGAAAGCT+CGG | - | chr4_4:78098260-78098279 | None:intergenic | 30.0% | |
| AAAAAGTGAGATGAAATCTG+GGG | - | chr4_4:78098888-78098907 | None:intergenic | 30.0% | |
| !!! | TGATTTTGTTTTTGTGGGTT+TGG | + | chr4_4:78099037-78099056 | Msa0705440:intron | 30.0% |
| TGTAGTCACCAGTATTATTT+GGG | + | chr4_4:78099322-78099341 | Msa0705440:intron | 30.0% | |
| ATAAACTCCCCAAATAATAC+TGG | - | chr4_4:78099333-78099352 | None:intergenic | 30.0% | |
| !!! | TTTTACTGGTTTTCACAGTT+TGG | + | chr4_4:78099397-78099416 | Msa0705440:intron | 30.0% |
| TCTTGGCTAAAAGAGATTAA+GGG | - | chr4_4:78099551-78099570 | None:intergenic | 30.0% | |
| TTCTTGGCTAAAAGAGATTA+AGG | - | chr4_4:78099552-78099571 | None:intergenic | 30.0% | |
| !! | TAAACATTTTTAGGCAACAG+AGG | - | chr4_4:78099829-78099848 | None:intergenic | 30.0% |
| ATTAATCATGTGCTTCAAAC+CGG | + | chr4_4:78100278-78100297 | Msa0705440:intron | 30.0% | |
| ! | ATTCTTTTCAGTTAATGCAG+AGG | + | chr4_4:78100322-78100341 | Msa0705440:intron | 30.0% |
| TGATTGAAATCAACTCAGAT+TGG | + | chr4_4:78100556-78100575 | Msa0705440:intron | 30.0% | |
| GAGAAAGAATCACTTGTAAT+TGG | - | chr4_4:78100758-78100777 | None:intergenic | 30.0% | |
| ! | AAAATAATGCACCTCCATTT+TGG | - | chr4_4:78100815-78100834 | None:intergenic | 30.0% |
| CAAGATGGCAAGATAAAATT+AGG | - | chr4_4:78100951-78100970 | None:intergenic | 30.0% | |
| ! | AGTAGAAGTGAAAGCGTAAT+AGG | + | chr4_4:78097688-78097707 | Msa0705440:five_prime_UTR | 35.0% |
| ! | AAGTGAAAGCGTAATAGGAA+GGG | + | chr4_4:78097693-78097712 | Msa0705440:five_prime_UTR | 35.0% |
| AGAAGAAGAAGAAGATAAGG+TGG | - | chr4_4:78097781-78097800 | None:intergenic | 35.0% | |
| AAATAATGAAGTGCGAGAAG+GGG | - | chr4_4:78097841-78097860 | None:intergenic | 35.0% | |
| GAAATAATGAAGTGCGAGAA+GGG | - | chr4_4:78097842-78097861 | None:intergenic | 35.0% | |
| ATAAGAAGAGCGAATAGTGA+AGG | - | chr4_4:78097880-78097899 | None:intergenic | 35.0% | |
| ACTATTCGCTCTTCTTATTC+CGG | + | chr4_4:78097882-78097901 | Msa0705440:CDS | 35.0% | |
| GATGAAAAACCTGGAATTGA+AGG | - | chr4_4:78097928-78097947 | None:intergenic | 35.0% | |
| TCATTCATTGACAGTGCAAA+CGG | - | chr4_4:78098063-78098082 | None:intergenic | 35.0% | |
| TAGTAAGCCAAAATGGAGAA+GGG | + | chr4_4:78098086-78098105 | Msa0705440:CDS | 35.0% | |
| ACGAAGTAGCCAACAAAAAT+TGG | - | chr4_4:78098528-78098547 | None:intergenic | 35.0% | |
| !! | ATAGAAGTACCAACAGAAGT+TGG | + | chr4_4:78098715-78098734 | Msa0705440:intron | 35.0% |
| AAAAGTGAGATGAAATCTGG+GGG | - | chr4_4:78098887-78098906 | None:intergenic | 35.0% | |
| AAGTCAAGAGCAACATCATA+TGG | - | chr4_4:78099003-78099022 | None:intergenic | 35.0% | |
| CATGCATTCAATTAACCAAG+GGG | - | chr4_4:78099213-78099232 | None:intergenic | 35.0% | |
| CCATGCATTCAATTAACCAA+GGG | - | chr4_4:78099214-78099233 | None:intergenic | 35.0% | |
| ACCATGCATTCAATTAACCA+AGG | - | chr4_4:78099215-78099234 | None:intergenic | 35.0% | |
| ! | TTGAATGCATGGTTTGAAGT+AGG | + | chr4_4:78099222-78099241 | Msa0705440:intron | 35.0% |
| ACAGATTACAAAACAGGTAC+CGG | - | chr4_4:78099305-78099324 | None:intergenic | 35.0% | |
| GTGACTACAGATTACAAAAC+AGG | - | chr4_4:78099311-78099330 | None:intergenic | 35.0% | |
| CTGTAGTCACCAGTATTATT+TGG | + | chr4_4:78099321-78099340 | Msa0705440:intron | 35.0% | |
| GTAGTCACCAGTATTATTTG+GGG | + | chr4_4:78099323-78099342 | Msa0705440:intron | 35.0% | |
| CAATATAATCAGCAGATGAG+CGG | - | chr4_4:78099518-78099537 | None:intergenic | 35.0% | |
| ! | GCTCATCTGCTGATTATATT+GGG | + | chr4_4:78099517-78099536 | Msa0705440:CDS | 35.0% |
| TACTAAATGCAGGAAATTGC+AGG | - | chr4_4:78099679-78099698 | None:intergenic | 35.0% | |
| TTTAGGCAACAGAGGATATT+TGG | - | chr4_4:78099821-78099840 | None:intergenic | 35.0% | |
| AATGCAGTTTGTACTCTAGT+TGG | - | chr4_4:78099968-78099987 | None:intergenic | 35.0% | |
| TCATTCTCGCATCTTCATAA+AGG | + | chr4_4:78100194-78100213 | Msa0705440:intron | 35.0% | |
| CATTCTCGCATCTTCATAAA+GGG | + | chr4_4:78100195-78100214 | Msa0705440:intron | 35.0% | |
| CTCAAAGCTACAAATGTTGA+TGG | + | chr4_4:78100350-78100369 | Msa0705440:three_prime_UTR | 35.0% | |
| TCTTGATACACTAACCTATC+AGG | + | chr4_4:78100415-78100434 | Msa0705440:three_prime_UTR | 35.0% | |
| AACAAAAGATCTGTCAGTGA+TGG | + | chr4_4:78100445-78100464 | Msa0705440:three_prime_UTR | 35.0% | |
| GTCTTCAATCTAAACAAACC+AGG | + | chr4_4:78100637-78100656 | Msa0705440:three_prime_UTR | 35.0% | |
| AACATAGAGAAGGCCATTAA+AGG | + | chr4_4:78100661-78100680 | Msa0705440:three_prime_UTR | 35.0% | |
| TTACAAGTGATTCTTTCTCG+TGG | + | chr4_4:78100759-78100778 | Msa0705440:three_prime_UTR | 35.0% | |
| !!! | TTTTTTATTTGCCATCCACG+TGG | + | chr4_4:78100920-78100939 | Msa0705440:three_prime_UTR | 35.0% |
| ! | TTTTATCTTGCCATCTTGTG+TGG | + | chr4_4:78100953-78100972 | Msa0705440:three_prime_UTR | 35.0% |
| !!! | ATTTTTTGACTTCTCAACCC+TGG | + | chr4_4:78100998-78101017 | Msa0705440:three_prime_UTR | 35.0% |
| ATTACATTAGCACTCAACTC+CGG | + | chr4_4:78101031-78101050 | Msa0705440:three_prime_UTR | 35.0% | |
| ! | GAAGTGAAAGCGTAATAGGA+AGG | + | chr4_4:78097692-78097711 | Msa0705440:five_prime_UTR | 40.0% |
| AGAAGAAGAAGATAAGGTGG+AGG | - | chr4_4:78097778-78097797 | None:intergenic | 40.0% | |
| CGAAATAATGAAGTGCGAGA+AGG | - | chr4_4:78097843-78097862 | None:intergenic | 40.0% | |
| CTAGTAAGCCAAAATGGAGA+AGG | + | chr4_4:78098085-78098104 | Msa0705440:CDS | 40.0% | |
| ! | AGCAAAACCCTTCTCCATTT+TGG | - | chr4_4:78098096-78098115 | None:intergenic | 40.0% |
| ! | AGGGTTTTGCTCAAAGTTAG+CGG | + | chr4_4:78098105-78098124 | Msa0705440:CDS | 40.0% |
| AGCTCAGAATATTGACCCTA+AGG | + | chr4_4:78098149-78098168 | Msa0705440:CDS | 40.0% | |
| !! | AGTTAATTTTTCGGCCCACA+TGG | + | chr4_4:78098422-78098441 | Msa0705440:intron | 40.0% |
| !! | GTTAATTTTTCGGCCCACAT+GGG | + | chr4_4:78098423-78098442 | Msa0705440:intron | 40.0% |
| CAACAAAAATTGGCATCAGG+AGG | - | chr4_4:78098518-78098537 | None:intergenic | 40.0% | |
| ! | CTCCTGATGCCAATTTTTGT+TGG | + | chr4_4:78098516-78098535 | Msa0705440:intron | 40.0% |
| AGCCAACAAAAATTGGCATC+AGG | - | chr4_4:78098521-78098540 | None:intergenic | 40.0% | |
| CCAATCCTACAGTCTACTTA+GGG | - | chr4_4:78098580-78098599 | None:intergenic | 40.0% | |
| ACCAATCCTACAGTCTACTT+AGG | - | chr4_4:78098581-78098600 | None:intergenic | 40.0% | |
| AGTTGACACGTAAACCACAA+GGG | + | chr4_4:78098752-78098771 | Msa0705440:intron | 40.0% | |
| ! | GGGGTGATTTGTAAATACGT+AGG | + | chr4_4:78098818-78098837 | Msa0705440:intron | 40.0% |
| TCAATACAGTCTCCAAGTCT+CGG | - | chr4_4:78098854-78098873 | None:intergenic | 40.0% | |
| ! | TTGGAGACTGTATTGACCTT+TGG | + | chr4_4:78098858-78098877 | Msa0705440:intron | 40.0% |
| ! | TGGAGACTGTATTGACCTTT+GGG | + | chr4_4:78098859-78098878 | Msa0705440:intron | 40.0% |
| AGGTAACTATGTCCATTGCA+AGG | + | chr4_4:78099064-78099083 | Msa0705440:intron | 40.0% | |
| GGTAACTATGTCCATTGCAA+GGG | + | chr4_4:78099065-78099084 | Msa0705440:intron | 40.0% | |
| CCCTTGGTTAATTGAATGCA+TGG | + | chr4_4:78099211-78099230 | Msa0705440:intron | 40.0% | |
| ! | TGCATGGTTTGAAGTAGGTT+TGG | + | chr4_4:78099227-78099246 | Msa0705440:intron | 40.0% |
| ! | GCATGGTTTGAAGTAGGTTT+GGG | + | chr4_4:78099228-78099247 | Msa0705440:intron | 40.0% |
| ! | CATGGTTTGAAGTAGGTTTG+GGG | + | chr4_4:78099229-78099248 | Msa0705440:intron | 40.0% |
| ACTAGTGCAACCTGAAACAT+CGG | - | chr4_4:78099438-78099457 | None:intergenic | 40.0% | |
| !! | TTTCAGGTTGCACTAGTTGT+TGG | + | chr4_4:78099441-78099460 | Msa0705440:intron | 40.0% |
| ! | CGCTCATCTGCTGATTATAT+TGG | + | chr4_4:78099516-78099535 | Msa0705440:CDS | 40.0% |
| TGATTTATCGTGTAGGATGC+TGG | + | chr4_4:78099889-78099908 | Msa0705440:three_prime_UTR | 40.0% | |
| ! | CAAGCAACAATGGAGAGTAT+TGG | + | chr4_4:78099938-78099957 | Msa0705440:three_prime_UTR | 40.0% |
| AGAACCGTATATACGCAGAA+GGG | + | chr4_4:78100006-78100025 | Msa0705440:three_prime_UTR | 40.0% | |
| GACACAAAGTTATGGCAGTA+AGG | - | chr4_4:78100472-78100491 | None:intergenic | 40.0% | |
| GTTTGTCTGCTTTACTTACC+AGG | - | chr4_4:78100509-78100528 | None:intergenic | 40.0% | |
| AAGGACAGATACAGTTCATC+AGG | - | chr4_4:78100600-78100619 | None:intergenic | 40.0% | |
| TGAAGACTACAACTGTTCCA+AGG | - | chr4_4:78100624-78100643 | None:intergenic | 40.0% | |
| CAAACCAGGTAACATAGAGA+AGG | + | chr4_4:78100651-78100670 | Msa0705440:three_prime_UTR | 40.0% | |
| AGAGAGTTGGCACTTTGATT+GGG | + | chr4_4:78100686-78100705 | Msa0705440:three_prime_UTR | 40.0% | |
| !! | GAGGTGCATTATTTTGCAGT+TGG | + | chr4_4:78100820-78100839 | Msa0705440:three_prime_UTR | 40.0% |
| TAAAATTAGGCCAAACCACG+TGG | - | chr4_4:78100938-78100957 | None:intergenic | 40.0% | |
| GGAGTTGAGTGCTAATGTAA+TGG | - | chr4_4:78101032-78101051 | None:intergenic | 40.0% | |
| AGGAAGGGAAGAAGAGAAAG+AGG | + | chr4_4:78097708-78097727 | Msa0705440:five_prime_UTR | 45.0% | |
| GGAAGGGAAGAAGAGAAAGA+GGG | + | chr4_4:78097709-78097728 | Msa0705440:five_prime_UTR | 45.0% | |
| GGAAGAAGAGAAAGAGGGTT+TGG | + | chr4_4:78097714-78097733 | Msa0705440:five_prime_UTR | 45.0% | |
| AGAAGAGAAAGAGGGTTTGG+CGG | + | chr4_4:78097717-78097736 | Msa0705440:five_prime_UTR | 45.0% | |
| GATAAGGTGGAGGAGAATAG+AGG | - | chr4_4:78097768-78097787 | None:intergenic | 45.0% | |
| CGCTCTTCTTATTCCGGAAA+TGG | + | chr4_4:78097888-78097907 | Msa0705440:CDS | 45.0% | |
| ATCAGGGGAAGAACCATTTC+CGG | - | chr4_4:78097904-78097923 | None:intergenic | 45.0% | |
| !! | ACCTGGAATTGAAGGCATCA+GGG | - | chr4_4:78097920-78097939 | None:intergenic | 45.0% |
| !! | AACCTGGAATTGAAGGCATC+AGG | - | chr4_4:78097921-78097940 | None:intergenic | 45.0% |
| ! | TAACAGGAACGAAGGCATGA+AGG | - | chr4_4:78097973-78097992 | None:intergenic | 45.0% |
| AGTGCAAACGGAGATATGGA+TGG | - | chr4_4:78098051-78098070 | None:intergenic | 45.0% | |
| TGACAGTGCAAACGGAGATA+TGG | - | chr4_4:78098055-78098074 | None:intergenic | 45.0% | |
| ATTGCAGGTAGACGACCTTA+GGG | - | chr4_4:78098167-78098186 | None:intergenic | 45.0% | |
| AATTGCAGGTAGACGACCTT+AGG | - | chr4_4:78098168-78098187 | None:intergenic | 45.0% | |
| AACACCAGACTAACCCATGT+GGG | - | chr4_4:78098439-78098458 | None:intergenic | 45.0% | |
| !! | TTAGTCTGGTGTTGTAGCCT+TGG | + | chr4_4:78098446-78098465 | Msa0705440:intron | 45.0% |
| !! | TAGTCTGGTGTTGTAGCCTT+GGG | + | chr4_4:78098447-78098466 | Msa0705440:intron | 45.0% |
| CTTGAACTTGAGACCTTGAG+AGG | - | chr4_4:78098488-78098507 | None:intergenic | 45.0% | |
| CCCTAAGTAGACTGTAGGAT+TGG | + | chr4_4:78098577-78098596 | Msa0705440:intron | 45.0% | |
| AAAACACGGTATCCGACCTA+GGG | - | chr4_4:78098622-78098641 | None:intergenic | 45.0% | |
| TAAAACACGGTATCCGACCT+AGG | - | chr4_4:78098623-78098642 | None:intergenic | 45.0% | |
| CCAACTGAACCAACTTCTGT+TGG | - | chr4_4:78098727-78098746 | None:intergenic | 45.0% | |
| ! | CCAACAGAAGTTGGTTCAGT+TGG | + | chr4_4:78098724-78098743 | Msa0705440:intron | 45.0% |
| ! | AGAAGTTGGTTCAGTTGGTC+AGG | + | chr4_4:78098729-78098748 | Msa0705440:intron | 45.0% |
| GAGTTGACACGTAAACCACA+AGG | + | chr4_4:78098751-78098770 | Msa0705440:intron | 45.0% | |
| AGTTGAATTTCGCACCCTTG+TGG | - | chr4_4:78098769-78098788 | None:intergenic | 45.0% | |
| ! | AAGGGTGCGAAATTCAACTC+CGG | + | chr4_4:78098770-78098789 | Msa0705440:intron | 45.0% |
| ! | GTTTTTGTGGGTTTGGATGC+AGG | + | chr4_4:78099044-78099063 | Msa0705440:intron | 45.0% |
| TATGTCCATTGCAAGGGAAG+TGG | + | chr4_4:78099071-78099090 | Msa0705440:CDS | 45.0% | |
| ! | TCAAGTTGTTTGAGACCCCT+TGG | + | chr4_4:78099195-78099214 | Msa0705440:intron | 45.0% |
| AATGATTGGGCCGATGTTTC+AGG | + | chr4_4:78099425-78099444 | Msa0705440:intron | 45.0% | |
| AGGTTGCACTAGTTGTTGGT+GGG | + | chr4_4:78099445-78099464 | Msa0705440:intron | 45.0% | |
| TGTCACGAGAGACAAAACGT+TGG | + | chr4_4:78099706-78099725 | Msa0705440:three_prime_UTR | 45.0% | |
| GTCACGAGAGACAAAACGTT+GGG | + | chr4_4:78099707-78099726 | Msa0705440:three_prime_UTR | 45.0% | |
| CAAAACGTTGGGTGTGTATG+TGG | + | chr4_4:78099718-78099737 | Msa0705440:three_prime_UTR | 45.0% | |
| AACTGCATTTCGCATGTCTG+AGG | + | chr4_4:78099979-78099998 | Msa0705440:three_prime_UTR | 45.0% | |
| CAGAACCGTATATACGCAGA+AGG | + | chr4_4:78100005-78100024 | Msa0705440:three_prime_UTR | 45.0% | |
| ACAGCCCTTCTGCGTATATA+CGG | - | chr4_4:78100013-78100032 | None:intergenic | 45.0% | |
| ! | TGAGGCATTTGGAGAAAGGA+AGG | + | chr4_4:78100032-78100051 | Msa0705440:three_prime_UTR | 45.0% |
| ! | GAGGCATTTGGAGAAAGGAA+GGG | + | chr4_4:78100033-78100052 | Msa0705440:three_prime_UTR | 45.0% |
| !!! | AGGGTTGTCATTTTTGCTGC+TGG | + | chr4_4:78100052-78100071 | Msa0705440:three_prime_UTR | 45.0% |
| GCAGTGTCTGTGGTAAAGAA+TGG | - | chr4_4:78100088-78100107 | None:intergenic | 45.0% | |
| ! | TTCTGCACATCTAAGTGCTG+CGG | - | chr4_4:78100110-78100129 | None:intergenic | 45.0% |
| AACTGTATCTGTCCTTGCCT+TGG | + | chr4_4:78100604-78100623 | Msa0705440:intron | 45.0% | |
| ACTACAACTGTTCCAAGGCA+AGG | - | chr4_4:78100619-78100638 | None:intergenic | 45.0% | |
| ATGGCCTTCTCTATGTTACC+TGG | - | chr4_4:78100658-78100677 | None:intergenic | 45.0% | |
| GCCATTAAAGGTGAGAGAGT+TGG | + | chr4_4:78100673-78100692 | Msa0705440:three_prime_UTR | 45.0% | |
| GCCAACTCTCTCACCTTTAA+TGG | - | chr4_4:78100677-78100696 | None:intergenic | 45.0% | |
| GAGAGAGTTGGCACTTTGAT+TGG | + | chr4_4:78100685-78100704 | Msa0705440:three_prime_UTR | 45.0% | |
| GAGAGTTGGCACTTTGATTG+GGG | + | chr4_4:78100687-78100706 | Msa0705440:three_prime_UTR | 45.0% | |
| GTTATGCAATCTTCCAGCTG+AGG | + | chr4_4:78100786-78100805 | Msa0705440:three_prime_UTR | 45.0% | |
| TATTTGCCATCCACGTGGTT+TGG | + | chr4_4:78100925-78100944 | Msa0705440:three_prime_UTR | 45.0% | |
| ! | ATGTAATGGAGCCACTACCA+GGG | - | chr4_4:78101018-78101037 | None:intergenic | 45.0% |
| ! | AATGTAATGGAGCCACTACC+AGG | - | chr4_4:78101019-78101038 | None:intergenic | 45.0% |
| !!! | TTTTTTATATTTTTAAAACA+CGG | - | chr4_4:78098636-78098655 | None:intergenic | 5.0% |
| !! | CCTGGAATTGAAGGCATCAG+GGG | - | chr4_4:78097919-78097938 | None:intergenic | 50.0% |
| CAACACCAGACTAACCCATG+TGG | - | chr4_4:78098440-78098459 | None:intergenic | 50.0% | |
| ! | CTTGAGAGGAGCACAATCCA+AGG | - | chr4_4:78098474-78098493 | None:intergenic | 50.0% |
| CTTGGATTGTGCTCCTCTCA+AGG | + | chr4_4:78098472-78098491 | Msa0705440:intron | 50.0% | |
| TAGGGCCCTAAGTAGACTGT+AGG | + | chr4_4:78098572-78098591 | Msa0705440:intron | 50.0% | |
| !! | ATTGGTCCTCCCGGATTAGT+CGG | + | chr4_4:78098595-78098614 | Msa0705440:intron | 50.0% |
| CGAAATTCAACTCCGGCTGT+TGG | + | chr4_4:78098777-78098796 | Msa0705440:intron | 50.0% | |
| TGTTGGCATGAGGACCTTGT+TGG | + | chr4_4:78098794-78098813 | Msa0705440:intron | 50.0% | |
| GTTGGCATGAGGACCTTGTT+GGG | + | chr4_4:78098795-78098814 | Msa0705440:intron | 50.0% | |
| TTGGCATGAGGACCTTGTTG+GGG | + | chr4_4:78098796-78098815 | Msa0705440:intron | 50.0% | |
| TACAAATCACCCCCCCAACA+AGG | - | chr4_4:78098811-78098830 | None:intergenic | 50.0% | |
| TGAAATCTGGGGGATCCCAA+AGG | - | chr4_4:78098877-78098896 | None:intergenic | 50.0% | |
| TAGTCACCTCAATGCCATGG+CGG | - | chr4_4:78099107-78099126 | None:intergenic | 50.0% | |
| GTGTAGTCACCTCAATGCCA+TGG | - | chr4_4:78099110-78099129 | None:intergenic | 50.0% | |
| ! | ATCTTTAGGGGAAGCTCTGC+CGG | + | chr4_4:78099283-78099302 | Msa0705440:intron | 50.0% |
| CAGGTTGCACTAGTTGTTGG+TGG | + | chr4_4:78099444-78099463 | Msa0705440:intron | 50.0% | |
| GGTTGCACTAGTTGTTGGTG+GGG | + | chr4_4:78099446-78099465 | Msa0705440:intron | 50.0% | |
| ! | GTTGCACTAGTTGTTGGTGG+GGG | + | chr4_4:78099447-78099466 | Msa0705440:CDS | 50.0% |
| ATATACGCAGAAGGGCTGTG+AGG | + | chr4_4:78100014-78100033 | Msa0705440:three_prime_UTR | 50.0% | |
| ! | GCTGTGAGGCATTTGGAGAA+AGG | + | chr4_4:78100028-78100047 | Msa0705440:three_prime_UTR | 50.0% |
| !!! | GTCATTTTTGCTGCTGGCAC+TGG | + | chr4_4:78100058-78100077 | Msa0705440:three_prime_UTR | 50.0% |
| TATCAAGAAGCCGCGCTTGA+GGG | - | chr4_4:78100403-78100422 | None:intergenic | 50.0% | |
| TCCAGCTGAGGATGCCAAAA+TGG | + | chr4_4:78100798-78100817 | Msa0705440:three_prime_UTR | 50.0% | |
| !! | TCCATTTTGGCATCCTCAGC+TGG | - | chr4_4:78100802-78100821 | None:intergenic | 50.0% |
| AGCTGAGGATGCCAAAATGG+AGG | + | chr4_4:78100801-78100820 | Msa0705440:three_prime_UTR | 50.0% | |
| ATTAGGCCAAACCACGTGGA+TGG | - | chr4_4:78100934-78100953 | None:intergenic | 50.0% | |
| TGACTTCTCAACCCTGGTAG+TGG | + | chr4_4:78101004-78101023 | Msa0705440:three_prime_UTR | 50.0% | |
| GTTTGGCGGCAGCAGCATAA+TGG | + | chr4_4:78097731-78097750 | Msa0705440:exon | 55.0% | |
| CCCCTGATGCCTTCAATTCC+AGG | + | chr4_4:78097916-78097935 | Msa0705440:CDS | 55.0% | |
| !! | GTTAGCGGAGAAGCACTTGC+TGG | + | chr4_4:78098120-78098139 | Msa0705440:CDS | 55.0% |
| ! | GTGTTGTAGCCTTGGGACCT+TGG | + | chr4_4:78098454-78098473 | Msa0705440:intron | 55.0% |
| GAGCACAATCCAAGGTCCCA+AGG | - | chr4_4:78098466-78098485 | None:intergenic | 55.0% | |
| !! | GACTGTAGGATTGGTCCTCC+CGG | + | chr4_4:78098586-78098605 | Msa0705440:intron | 55.0% |
| ACCTAGGGACCGACTAATCC+GGG | - | chr4_4:78098607-78098626 | None:intergenic | 55.0% | |
| GACCTAGGGACCGACTAATC+CGG | - | chr4_4:78098608-78098627 | None:intergenic | 55.0% | |
| !! | GGATTAGTCGGTCCCTAGGT+CGG | + | chr4_4:78098607-78098626 | Msa0705440:intron | 55.0% |
| AAGGTCCTCATGCCAACAGC+CGG | - | chr4_4:78098792-78098811 | None:intergenic | 55.0% | |
| TGGCATGAGGACCTTGTTGG+GGG | + | chr4_4:78098797-78098816 | Msa0705440:intron | 55.0% | |
| GGTTAGTGCTCTCCGAGACT+TGG | + | chr4_4:78098839-78098858 | Msa0705440:intron | 55.0% | |
| ! | AGCTGCCACTTCCCTTGCAA+TGG | - | chr4_4:78099079-78099098 | None:intergenic | 55.0% |
| TGTAACCCGCCATGGCATTG+AGG | + | chr4_4:78099098-78099117 | Msa0705440:CDS | 55.0% | |
| AGTCACCTCAATGCCATGGC+GGG | - | chr4_4:78099106-78099125 | None:intergenic | 55.0% | |
| ! | CAGAAGGGCTGTGAGGCATT+TGG | + | chr4_4:78100021-78100040 | Msa0705440:three_prime_UTR | 55.0% |
| CAAAGCGTAACCCTCAAGCG+CGG | + | chr4_4:78100390-78100409 | Msa0705440:three_prime_UTR | 55.0% | |
| GTATCAAGAAGCCGCGCTTG+AGG | - | chr4_4:78100404-78100423 | None:intergenic | 55.0% | |
| GCACTTTGATTGGGGCAACG+TGG | + | chr4_4:78100695-78100714 | Msa0705440:three_prime_UTR | 55.0% | |
| !! | TCGGCCCACATGGGTTAGTC+TGG | + | chr4_4:78098432-78098451 | Msa0705440:intron | 60.0% |
| TAGGGACCGACTAATCCGGG+AGG | - | chr4_4:78098604-78098623 | None:intergenic | 60.0% | |
| !! | TCCCGGATTAGTCGGTCCCT+AGG | + | chr4_4:78098603-78098622 | Msa0705440:intron | 60.0% |
| CAACTCCGGCTGTTGGCATG+AGG | + | chr4_4:78098784-78098803 | Msa0705440:intron | 60.0% | |
| GGCATGAGGACCTTGTTGGG+GGG | + | chr4_4:78098798-78098817 | Msa0705440:intron | 60.0% | |
| GCATGAGGACCTTGTTGGGG+GGG | + | chr4_4:78098799-78098818 | Msa0705440:intron | 60.0% | |
| GGTGGGGGTAACATCTTCCG+TGG | + | chr4_4:78099462-78099481 | Msa0705440:CDS | 60.0% | |
| ACATCTTCCGTGGAGCCTCG+TGG | + | chr4_4:78099472-78099491 | Msa0705440:CDS | 60.0% | |
| CATCTTCCGTGGAGCCTCGT+GGG | + | chr4_4:78099473-78099492 | Msa0705440:CDS | 60.0% | |
| ACCACTACTTCCAGCCCACG+AGG | - | chr4_4:78099490-78099509 | None:intergenic | 60.0% | |
| ! | AAGTGCTGCGGCAGTGTCTG+TGG | - | chr4_4:78100098-78100117 | None:intergenic | 60.0% |
| CGCGCTTGAGGGTTACGCTT+TGG | - | chr4_4:78100392-78100411 | None:intergenic | 60.0% | |
| GTGGCAGCTGTAACCCGCCA+TGG | + | chr4_4:78099090-78099109 | Msa0705440:CDS | 65.0% | |
| TTCCAGCCCACGAGGCTCCA+CGG | - | chr4_4:78099482-78099501 | None:intergenic | 65.0% | |
| !! | GCCTCGTGGGCTGGAAGTAG+TGG | + | chr4_4:78099486-78099505 | Msa0705440:CDS | 65.0% |
| TTCCGTGGAGCCTCGTGGGC+TGG | + | chr4_4:78099477-78099496 | Msa0705440:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 78097676 | 78101091 | 78097676 | ID=Msa0705440;Name=Msa0705440 |
| chr4_4 | mRNA | 78097676 | 78101091 | 78097676 | ID=Msa0705440-mRNA-1;Parent=Msa0705440;Name=Msa0705440-mRNA-1;_AED=0.01;_eAED=0.01;_QI=74|1|1|1|1|0.83|6|1225|158 |
| chr4_4 | exon | 78097676 | 78097937 | 78097676 | ID=Msa0705440-mRNA-1:exon:24882;Parent=Msa0705440-mRNA-1 |
| chr4_4 | exon | 78098032 | 78098170 | 78098032 | ID=Msa0705440-mRNA-1:exon:24883;Parent=Msa0705440-mRNA-1 |
| chr4_4 | exon | 78099066 | 78099119 | 78099066 | ID=Msa0705440-mRNA-1:exon:24884;Parent=Msa0705440-mRNA-1 |
| chr4_4 | exon | 78099447 | 78100130 | 78099447 | ID=Msa0705440-mRNA-1:exon:24885;Parent=Msa0705440-mRNA-1 |
| chr4_4 | exon | 78100333 | 78100509 | 78100333 | ID=Msa0705440-mRNA-1:exon:24886;Parent=Msa0705440-mRNA-1 |
| chr4_4 | exon | 78100632 | 78101091 | 78100632 | ID=Msa0705440-mRNA-1:exon:24887;Parent=Msa0705440-mRNA-1 |
| chr4_4 | five_prime_UTR | 78097676 | 78097749 | 78097676 | ID=Msa0705440-mRNA-1:five_prime_utr;Parent=Msa0705440-mRNA-1 |
| chr4_4 | CDS | 78097750 | 78097937 | 78097750 | ID=Msa0705440-mRNA-1:cds;Parent=Msa0705440-mRNA-1 |
| chr4_4 | CDS | 78098032 | 78098170 | 78098032 | ID=Msa0705440-mRNA-1:cds;Parent=Msa0705440-mRNA-1 |
| chr4_4 | CDS | 78099066 | 78099119 | 78099066 | ID=Msa0705440-mRNA-1:cds;Parent=Msa0705440-mRNA-1 |
| chr4_4 | CDS | 78099447 | 78099542 | 78099447 | ID=Msa0705440-mRNA-1:cds;Parent=Msa0705440-mRNA-1 |
| chr4_4 | three_prime_UTR | 78099543 | 78100130 | 78099543 | ID=Msa0705440-mRNA-1:three_prime_utr;Parent=Msa0705440-mRNA-1 |
| chr4_4 | three_prime_UTR | 78100333 | 78100509 | 78100333 | ID=Msa0705440-mRNA-1:three_prime_utr;Parent=Msa0705440-mRNA-1 |
| chr4_4 | three_prime_UTR | 78100632 | 78101091 | 78100632 | ID=Msa0705440-mRNA-1:three_prime_utr;Parent=Msa0705440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
