Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0596430 | KEH29355.1 | 92.814 | 167 | 12 | 0 | 1 | 167 | 30 | 196 | 3.82e-101 | 299 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0596430 | sp|F4KDA6|LPA2_ARATH | 41.935 | 186 | 80 | 4 | 1 | 163 | 1 | 181 | 2.11e-37 | 129 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0596430 | 0.815296 | 9.939549e-52 | -8.615850e-47 |
| Msa0009210 | Msa0596430 | 0.821166 | 4.665431e-53 | -8.615850e-47 |
| Msa0012460 | Msa0596430 | 0.850750 | 1.387613e-60 | -8.615850e-47 |
| Msa0017120 | Msa0596430 | 0.803592 | 3.238558e-49 | -8.615850e-47 |
| Msa0028410 | Msa0596430 | 0.801537 | 8.593510e-49 | -8.615850e-47 |
| Msa0032350 | Msa0596430 | 0.812339 | 4.454969e-51 | -8.615850e-47 |
| Msa0034320 | Msa0596430 | 0.816988 | 4.163345e-52 | -8.615850e-47 |
| Msa0044380 | Msa0596430 | 0.815074 | 1.113853e-51 | -8.615850e-47 |
| Msa0050360 | Msa0596430 | 0.800433 | 1.444554e-48 | -8.615850e-47 |
| Msa0052550 | Msa0596430 | 0.810293 | 1.238716e-50 | -8.615850e-47 |
| Msa0056040 | Msa0596430 | 0.811408 | 7.104996e-51 | -8.615850e-47 |
| Msa0058970 | Msa0596430 | 0.819336 | 1.225098e-52 | -8.615850e-47 |
| Msa0061320 | Msa0596430 | 0.815522 | 8.854287e-52 | -8.615850e-47 |
| Msa0065390 | Msa0596430 | 0.803652 | 3.147444e-49 | -8.615850e-47 |
| Msa0077910 | Msa0596430 | 0.831644 | 1.485460e-55 | -8.615850e-47 |
| Msa0079530 | Msa0596430 | 0.827991 | 1.152295e-54 | -8.615850e-47 |
| Msa0081300 | Msa0596430 | 0.813390 | 2.622063e-51 | -8.615850e-47 |
| Msa0089210 | Msa0596430 | 0.809241 | 2.085646e-50 | -8.615850e-47 |
| Msa0092660 | Msa0596430 | 0.808907 | 2.458916e-50 | -8.615850e-47 |
| Msa0092730 | Msa0596430 | 0.805754 | 1.145682e-49 | -8.615850e-47 |
| Msa0092750 | Msa0596430 | 0.811273 | 7.601206e-51 | -8.615850e-47 |
| Msa0103780 | Msa0596430 | 0.810274 | 1.250523e-50 | -8.615850e-47 |
| Msa0112340 | Msa0596430 | 0.824296 | 8.715591e-54 | -8.615850e-47 |
| Msa0115010 | Msa0596430 | 0.816733 | 4.748384e-52 | -8.615850e-47 |
| Msa0122210 | Msa0596430 | 0.805854 | 1.091944e-49 | -8.615850e-47 |
| Msa0124070 | Msa0596430 | 0.800144 | 1.653736e-48 | -8.615850e-47 |
| Msa0125800 | Msa0596430 | 0.832850 | 7.472251e-56 | -8.615850e-47 |
| Msa0143490 | Msa0596430 | 0.817757 | 2.793969e-52 | -8.615850e-47 |
| Msa0144340 | Msa0596430 | 0.850746 | 1.390970e-60 | -8.615850e-47 |
| Msa0146470 | Msa0596430 | 0.806535 | 7.848190e-50 | -8.615850e-47 |
| Msa0149070 | Msa0596430 | 0.806690 | 7.278815e-50 | -8.615850e-47 |
| Msa0150210 | Msa0596430 | 0.807554 | 4.776779e-50 | -8.615850e-47 |
| Msa0152380 | Msa0596430 | 0.826564 | 2.532086e-54 | -8.615850e-47 |
| Msa0155550 | Msa0596430 | 0.845073 | 5.096143e-59 | -8.615850e-47 |
| Msa0157020 | Msa0596430 | 0.804992 | 1.655122e-49 | -8.615850e-47 |
| Msa0164540 | Msa0596430 | 0.812948 | 3.279106e-51 | -8.615850e-47 |
| Msa0168900 | Msa0596430 | 0.822638 | 2.128187e-53 | -8.615850e-47 |
| Msa0170440 | Msa0596430 | 0.830274 | 3.220684e-55 | -8.615850e-47 |
| Msa0173610 | Msa0596430 | 0.816837 | 4.501812e-52 | -8.615850e-47 |
| Msa0181010 | Msa0596430 | 0.834978 | 2.192655e-56 | -8.615850e-47 |
| Msa0183490 | Msa0596430 | 0.808898 | 2.469623e-50 | -8.615850e-47 |
| Msa0185390 | Msa0596430 | 0.830587 | 2.700007e-55 | -8.615850e-47 |
| Msa0186750 | Msa0596430 | 0.809537 | 1.801728e-50 | -8.615850e-47 |
| Msa0190000 | Msa0596430 | 0.827565 | 1.458575e-54 | -8.615850e-47 |
| Msa0192020 | Msa0596430 | 0.816765 | 4.670822e-52 | -8.615850e-47 |
| Msa0202160 | Msa0596430 | 0.805702 | 1.175126e-49 | -8.615850e-47 |
| Msa0202630 | Msa0596430 | 0.829088 | 6.258438e-55 | -8.615850e-47 |
| Msa0215980 | Msa0596430 | 0.808244 | 3.406632e-50 | -8.615850e-47 |
| Msa0216790 | Msa0596430 | 0.819864 | 9.282268e-53 | -8.615850e-47 |
| Msa0220110 | Msa0596430 | 0.818381 | 2.019065e-52 | -8.615850e-47 |
| Msa0222070 | Msa0596430 | 0.813319 | 2.717828e-51 | -8.615850e-47 |
| Msa0222120 | Msa0596430 | 0.816379 | 5.700987e-52 | -8.615850e-47 |
| Msa0223390 | Msa0596430 | 0.806066 | 9.853747e-50 | -8.615850e-47 |
| Msa0225010 | Msa0596430 | 0.816723 | 4.773375e-52 | -8.615850e-47 |
| Msa0227290 | Msa0596430 | 0.802676 | 5.011452e-49 | -8.615850e-47 |
| Msa0367370 | Msa0596430 | 0.808295 | 3.322980e-50 | -8.615850e-47 |
| Msa0371050 | Msa0596430 | 0.800801 | 1.215357e-48 | -8.615850e-47 |
| Msa0373950 | Msa0596430 | 0.805475 | 1.311508e-49 | -8.615850e-47 |
| Msa0375430 | Msa0596430 | 0.816426 | 5.563810e-52 | -8.615850e-47 |
| Msa0379090 | Msa0596430 | 0.814121 | 1.809890e-51 | -8.615850e-47 |
| Msa0379110 | Msa0596430 | 0.812302 | 4.538921e-51 | -8.615850e-47 |
| Msa0379900 | Msa0596430 | 0.812361 | 4.406523e-51 | -8.615850e-47 |
| Msa0380360 | Msa0596430 | 0.810166 | 1.319516e-50 | -8.615850e-47 |
| Msa0380520 | Msa0596430 | 0.810577 | 1.075516e-50 | -8.615850e-47 |
| Msa0382500 | Msa0596430 | 0.824446 | 8.035888e-54 | -8.615850e-47 |
| Msa0399180 | Msa0596430 | 0.828250 | 9.980719e-55 | -8.615850e-47 |
| Msa0414990 | Msa0596430 | 0.830446 | 2.924197e-55 | -8.615850e-47 |
| Msa0415460 | Msa0596430 | 0.826712 | 2.333863e-54 | -8.615850e-47 |
| Msa0415930 | Msa0596430 | 0.825585 | 4.327365e-54 | -8.615850e-47 |
| Msa0417630 | Msa0596430 | 0.834730 | 2.530865e-56 | -8.615850e-47 |
| Msa0424470 | Msa0596430 | 0.821717 | 3.481166e-53 | -8.615850e-47 |
| Msa0426480 | Msa0596430 | 0.800858 | 1.183387e-48 | -8.615850e-47 |
| Msa0430020 | Msa0596430 | 0.831331 | 1.773774e-55 | -8.615850e-47 |
| Msa0432680 | Msa0596430 | 0.829251 | 5.715471e-55 | -8.615850e-47 |
| Msa0444340 | Msa0596430 | 0.860588 | 1.860610e-63 | -8.615850e-47 |
| Msa0446480 | Msa0596430 | 0.804434 | 2.164216e-49 | -8.615850e-47 |
| Msa0463140 | Msa0596430 | 0.818574 | 1.825976e-52 | -8.615850e-47 |
| Msa0463540 | Msa0596430 | 0.812283 | 4.583787e-51 | -8.615850e-47 |
| Msa0466070 | Msa0596430 | 0.817866 | 2.640371e-52 | -8.615850e-47 |
| Msa0475130 | Msa0596430 | 0.809613 | 1.735625e-50 | -8.615850e-47 |
| Msa0480150 | Msa0596430 | 0.808750 | 2.656288e-50 | -8.615850e-47 |
| Msa0482020 | Msa0596430 | 0.817969 | 2.502650e-52 | -8.615850e-47 |
| Msa0247310 | Msa0596430 | 0.818124 | 2.308939e-52 | -8.615850e-47 |
| Msa0251110 | Msa0596430 | 0.806069 | 9.837561e-50 | -8.615850e-47 |
| Msa0253410 | Msa0596430 | 0.818022 | 2.434926e-52 | -8.615850e-47 |
| Msa0257130 | Msa0596430 | 0.822575 | 2.201077e-53 | -8.615850e-47 |
| Msa0261440 | Msa0596430 | 0.851013 | 1.169692e-60 | -8.615850e-47 |
| Msa0263620 | Msa0596430 | 0.813771 | 2.161828e-51 | -8.615850e-47 |
| Msa0266100 | Msa0596430 | 0.808686 | 2.741161e-50 | -8.615850e-47 |
| Msa0269830 | Msa0596430 | 0.841781 | 3.858528e-58 | -8.615850e-47 |
| Msa0280140 | Msa0596430 | 0.811601 | 6.452498e-51 | -8.615850e-47 |
| Msa0284260 | Msa0596430 | 0.819604 | 1.064469e-52 | -8.615850e-47 |
| Msa0301460 | Msa0596430 | 0.801995 | 6.919985e-49 | -8.615850e-47 |
| Msa0302660 | Msa0596430 | 0.809479 | 1.854143e-50 | -8.615850e-47 |
| Msa0311910 | Msa0596430 | 0.803792 | 2.944306e-49 | -8.615850e-47 |
| Msa0327900 | Msa0596430 | 0.802533 | 5.362241e-49 | -8.615850e-47 |
| Msa0334780 | Msa0596430 | 0.812883 | 3.388918e-51 | -8.615850e-47 |
| Msa0349450 | Msa0596430 | 0.814237 | 1.706377e-51 | -8.615850e-47 |
| Msa0485280 | Msa0596430 | 0.809850 | 1.543564e-50 | -8.615850e-47 |
| Msa0486200 | Msa0596430 | 0.803528 | 3.339750e-49 | -8.615850e-47 |
| Msa0504740 | Msa0596430 | 0.809651 | 1.702606e-50 | -8.615850e-47 |
| Msa0512130 | Msa0596430 | 0.805669 | 1.193649e-49 | -8.615850e-47 |
| Msa0519200 | Msa0596430 | 0.816055 | 6.734604e-52 | -8.615850e-47 |
| Msa0520450 | Msa0596430 | 0.832341 | 9.991962e-56 | -8.615850e-47 |
| Msa0524020 | Msa0596430 | 0.806203 | 9.221448e-50 | -8.615850e-47 |
| Msa0524090 | Msa0596430 | 0.808167 | 3.537131e-50 | -8.615850e-47 |
| Msa0524120 | Msa0596430 | 0.808838 | 2.544300e-50 | -8.615850e-47 |
| Msa0528870 | Msa0596430 | 0.816315 | 5.891674e-52 | -8.615850e-47 |
| Msa0534890 | Msa0596430 | 0.814853 | 1.246984e-51 | -8.615850e-47 |
| Msa0538570 | Msa0596430 | 0.804249 | 2.365182e-49 | -8.615850e-47 |
| Msa0542040 | Msa0596430 | 0.810553 | 1.088766e-50 | -8.615850e-47 |
| Msa0544780 | Msa0596430 | 0.824381 | 8.324656e-54 | -8.615850e-47 |
| Msa0546740 | Msa0596430 | 0.821736 | 3.445653e-53 | -8.615850e-47 |
| Msa0550720 | Msa0596430 | 0.817308 | 3.526803e-52 | -8.615850e-47 |
| Msa0552670 | Msa0596430 | 0.826697 | 2.352623e-54 | -8.615850e-47 |
| Msa0553350 | Msa0596430 | 0.809861 | 1.535197e-50 | -8.615850e-47 |
| Msa0567290 | Msa0596430 | 0.826856 | 2.156512e-54 | -8.615850e-47 |
| Msa0574450 | Msa0596430 | 0.807169 | 5.764781e-50 | -8.615850e-47 |
| Msa0576420 | Msa0596430 | 0.808160 | 3.550187e-50 | -8.615850e-47 |
| Msa0595780 | Msa0596430 | 0.809030 | 2.313930e-50 | -8.615850e-47 |
| Msa0596430 | Msa0600390 | 0.840253 | 9.721904e-58 | -8.615850e-47 |
| Msa0596430 | Msa0619060 | 0.814807 | 1.276628e-51 | -8.615850e-47 |
| Msa0596430 | Msa0619170 | 0.807235 | 5.581232e-50 | -8.615850e-47 |
| Msa0596430 | Msa0619330 | 0.800456 | 1.428956e-48 | -8.615850e-47 |
| Msa0596430 | Msa0624220 | 0.829874 | 4.032486e-55 | -8.615850e-47 |
| Msa0596430 | Msa0624240 | 0.841011 | 6.155161e-58 | -8.615850e-47 |
| Msa0596430 | Msa0638710 | 0.814579 | 1.434003e-51 | -8.615850e-47 |
| Msa0596430 | Msa0640880 | 0.837482 | 5.065371e-57 | -8.615850e-47 |
| Msa0596430 | Msa0647110 | 0.822323 | 2.518748e-53 | -8.615850e-47 |
| Msa0596430 | Msa0647460 | 0.844268 | 8.400518e-59 | -8.615850e-47 |
| Msa0596430 | Msa0647710 | 0.816679 | 4.882557e-52 | -8.615850e-47 |
| Msa0596430 | Msa0652360 | 0.838516 | 2.745167e-57 | -8.615850e-47 |
| Msa0596430 | Msa0659070 | 0.801681 | 8.029932e-49 | -8.615850e-47 |
| Msa0596430 | Msa0659130 | 0.811174 | 7.986888e-51 | -8.615850e-47 |
| Msa0596430 | Msa0660410 | 0.811297 | 7.512235e-51 | -8.615850e-47 |
| Msa0596430 | Msa0679270 | 0.813826 | 2.102931e-51 | -8.615850e-47 |
| Msa0596430 | Msa0681890 | 0.843317 | 1.509096e-58 | -8.615850e-47 |
| Msa0596430 | Msa0685520 | 0.848666 | 5.299958e-60 | -8.615850e-47 |
| Msa0596430 | Msa0690530 | 0.811709 | 6.114369e-51 | -8.615850e-47 |
| Msa0596430 | Msa0698860 | 0.800695 | 1.277478e-48 | -8.615850e-47 |
| Msa0596430 | Msa0702070 | 0.844385 | 7.809893e-59 | -8.615850e-47 |
| Msa0596430 | Msa0702120 | 0.841090 | 5.866740e-58 | -8.615850e-47 |
| Msa0596430 | Msa0703720 | 0.821464 | 3.982496e-53 | -8.615850e-47 |
| Msa0596430 | Msa0703760 | 0.829948 | 3.868303e-55 | -8.615850e-47 |
| Msa0596430 | Msa0704570 | 0.819512 | 1.117139e-52 | -8.615850e-47 |
| Msa0596430 | Msa0705030 | 0.807240 | 5.567609e-50 | -8.615850e-47 |
| Msa0596430 | Msa0705610 | 0.828479 | 8.786665e-55 | -8.615850e-47 |
| Msa0596430 | Msa0712500 | 0.818484 | 1.913904e-52 | -8.615850e-47 |
| Msa0596430 | Msa0717270 | 0.806493 | 8.010112e-50 | -8.615850e-47 |
| Msa0596430 | Msa0719340 | 0.805079 | 1.586879e-49 | -8.615850e-47 |
| Msa0596430 | Msa0720380 | 0.813733 | 2.204197e-51 | -8.615850e-47 |
| Msa0596430 | Msa0732100 | 0.838760 | 2.375270e-57 | -8.615850e-47 |
| Msa0596430 | Msa0748890 | 0.830682 | 2.559097e-55 | -8.615850e-47 |
| Msa0596430 | Msa0760730 | 0.807882 | 4.067970e-50 | -8.615850e-47 |
| Msa0596430 | Msa0773080 | 0.814734 | 1.324709e-51 | -8.615850e-47 |
| Msa0596430 | Msa0794130 | 0.801129 | 1.041750e-48 | -8.615850e-47 |
| Msa0596430 | Msa0799150 | 0.806825 | 6.815192e-50 | -8.615850e-47 |
| Msa0596430 | Msa0799710 | 0.804378 | 2.222913e-49 | -8.615850e-47 |
| Msa0596430 | Msa0804930 | 0.814714 | 1.338758e-51 | -8.615850e-47 |
| Msa0596430 | Msa0825960 | 0.806510 | 7.942133e-50 | -8.615850e-47 |
| Msa0596430 | Msa0851740 | 0.804375 | 2.226501e-49 | -8.615850e-47 |
| Msa0596430 | Msa0851870 | 0.803067 | 4.160890e-49 | -8.615850e-47 |
| Msa0596430 | Msa0880230 | 0.816029 | 6.826169e-52 | -8.615850e-47 |
| Msa0596430 | Msa0893390 | 0.804269 | 2.342894e-49 | -8.615850e-47 |
| Msa0596430 | Msa0910650 | 0.801001 | 1.106235e-48 | -8.615850e-47 |
| Msa0596430 | Msa0931480 | 0.802961 | 4.375706e-49 | -8.615850e-47 |
| Msa0596430 | Msa0931730 | 0.805036 | 1.620065e-49 | -8.615850e-47 |
| Msa0596430 | Msa0959970 | 0.815959 | 7.077350e-52 | -8.615850e-47 |
| Msa0596430 | Msa0966410 | 0.802153 | 6.421494e-49 | -8.615850e-47 |
| Msa0596430 | Msa0970090 | 0.820464 | 6.764183e-53 | -8.615850e-47 |
| Msa0596430 | Msa0972730 | 0.811164 | 8.027356e-51 | -8.615850e-47 |
| Msa0596430 | Msa0990520 | 0.813970 | 1.954512e-51 | -8.615850e-47 |
| Msa0596430 | Msa0992570 | 0.840125 | 1.049386e-57 | -8.615850e-47 |
| Msa0596430 | Msa0992590 | 0.800498 | 1.401227e-48 | -8.615850e-47 |
| Msa0596430 | Msa1001780 | 0.834336 | 3.179069e-56 | -8.615850e-47 |
| Msa0596430 | Msa1002980 | 0.818379 | 2.021467e-52 | -8.615850e-47 |
| Msa0596430 | Msa1022310 | 0.857592 | 1.469881e-62 | -8.615850e-47 |
| Msa0596430 | Msa1027150 | 0.805065 | 1.597948e-49 | -8.615850e-47 |
| Msa0596430 | Msa1029320 | 0.801353 | 9.371476e-49 | -8.615850e-47 |
| Msa0596430 | Msa1033120 | 0.818431 | 1.967714e-52 | -8.615850e-47 |
| Msa0596430 | Msa1035090 | 0.815427 | 9.295845e-52 | -8.615850e-47 |
| Msa0596430 | Msa1040770 | 0.808510 | 2.990007e-50 | -8.615850e-47 |
| Msa0596430 | Msa1045440 | 0.829955 | 3.852488e-55 | -8.615850e-47 |
| Msa0596430 | Msa1061180 | 0.856238 | 3.683025e-62 | -8.615850e-47 |
| Msa0596430 | Msa1061310 | 0.800125 | 1.668732e-48 | -8.615850e-47 |
| Msa0596430 | Msa1067430 | 0.833530 | 5.058436e-56 | -8.615850e-47 |
| Msa0596430 | Msa1074630 | 0.829597 | 4.708493e-55 | -8.615850e-47 |
| Msa0596430 | Msa1081850 | 0.800842 | 1.192395e-48 | -8.615850e-47 |
| Msa0596430 | Msa1090230 | 0.807821 | 4.191887e-50 | -8.615850e-47 |
| Msa0596430 | Msa1106560 | 0.805906 | 1.064795e-49 | -8.615850e-47 |
| Msa0596430 | Msa1111670 | 0.800818 | 1.205722e-48 | -8.615850e-47 |
| Msa0596430 | Msa1126310 | 0.816048 | 6.759309e-52 | -8.615850e-47 |
| Msa0596430 | Msa1126910 | 0.804510 | 2.086387e-49 | -8.615850e-47 |
| Msa0596430 | Msa1127510 | 0.803699 | 3.077225e-49 | -8.615850e-47 |
| Msa0596430 | Msa1128350 | 0.817830 | 2.690442e-52 | -8.615850e-47 |
| Msa0596430 | Msa1149960 | 0.816783 | 4.629208e-52 | -8.615850e-47 |
| Msa0596430 | Msa1157160 | 0.812788 | 3.554890e-51 | -8.615850e-47 |
| Msa0596430 | Msa1162470 | 0.809179 | 2.150743e-50 | -8.615850e-47 |
| Msa0596430 | Msa1166180 | 0.803595 | 3.234923e-49 | -8.615850e-47 |
| Msa0596430 | Msa1167160 | 0.806568 | 7.723529e-50 | -8.615850e-47 |
| Msa0596430 | Msa1183760 | 0.833345 | 5.626212e-56 | -8.615850e-47 |
| Msa0596430 | Msa1199210 | 0.854066 | 1.576727e-61 | -8.615850e-47 |
| Msa0596430 | Msa1208750 | 0.810840 | 9.436528e-51 | -8.615850e-47 |
| Msa0596430 | Msa1209390 | 0.818986 | 1.472021e-52 | -8.615850e-47 |
| Msa0596430 | Msa1209650 | 0.804362 | 2.240452e-49 | -8.615850e-47 |
| Msa0596430 | Msa1213540 | 0.801353 | 9.372666e-49 | -8.615850e-47 |
| Msa0596430 | Msa1220740 | 0.807279 | 5.462446e-50 | -8.615850e-47 |
| Msa0596430 | Msa1222390 | 0.820938 | 5.264254e-53 | -8.615850e-47 |
| Msa0596430 | Msa1228780 | 0.810396 | 1.176728e-50 | -8.615850e-47 |
| Msa0596430 | Msa1252730 | 0.811132 | 8.155982e-51 | -8.615850e-47 |
| Msa0596430 | Msa1254170 | 0.805094 | 1.575441e-49 | -8.615850e-47 |
| Msa0596430 | Msa1263590 | 0.807449 | 5.026585e-50 | -8.615850e-47 |
| Msa0596430 | Msa1263670 | 0.807372 | 5.221302e-50 | -8.615850e-47 |
| Msa0596430 | Msa1271600 | 0.802677 | 5.007733e-49 | -8.615850e-47 |
| Msa0596430 | Msa1284030 | 0.816902 | 4.351620e-52 | -8.615850e-47 |
| Msa0596430 | Msa1293530 | 0.857202 | 1.917048e-62 | -8.615850e-47 |
| Msa0596430 | Msa1298740 | 0.812338 | 4.458631e-51 | -8.615850e-47 |
| Msa0596430 | Msa1300880 | 0.808701 | 2.722037e-50 | -8.615850e-47 |
| Msa0596430 | Msa1306590 | 0.817797 | 2.736959e-52 | -8.615850e-47 |
| Msa0596430 | Msa1309100 | 0.826651 | 2.413274e-54 | -8.615850e-47 |
| Msa0596430 | Msa1325980 | 0.806812 | 6.859597e-50 | -8.615850e-47 |
| Msa0596430 | Msa1331900 | 0.823571 | 1.289184e-53 | -8.615850e-47 |
| Msa0596430 | Msa1334650 | 0.803268 | 3.780001e-49 | -8.615850e-47 |
| Msa0596430 | Msa1336320 | 0.816333 | 5.836584e-52 | -8.615850e-47 |
| Msa0596430 | Msa1339250 | 0.830472 | 2.880217e-55 | -8.615850e-47 |
| Msa0596430 | Msa1341790 | 0.800662 | 1.297140e-48 | -8.615850e-47 |
| Msa0596430 | Msa1342080 | 0.821223 | 4.524966e-53 | -8.615850e-47 |
| Msa0596430 | Msa1344430 | 0.816930 | 4.290800e-52 | -8.615850e-47 |
| Msa0596430 | Msa1348770 | 0.809524 | 1.813015e-50 | -8.615850e-47 |
| Msa0596430 | Msa1355860 | 0.843581 | 1.283223e-58 | -8.615850e-47 |
| Msa0596430 | Msa1356200 | 0.819881 | 9.201239e-53 | -8.615850e-47 |
| Msa0596430 | Msa1367810 | 0.827599 | 1.431118e-54 | -8.615850e-47 |
| Msa0596430 | Msa1368730 | 0.816735 | 4.744379e-52 | -8.615850e-47 |
| Msa0596430 | Msa1373340 | 0.800746 | 1.246902e-48 | -8.615850e-47 |
| Msa0596430 | Msa1374810 | 0.815743 | 7.905349e-52 | -8.615850e-47 |
| Msa0596430 | Msa1374850 | 0.807211 | 5.646937e-50 | -8.615850e-47 |
| Msa0596430 | Msa1375330 | 0.817889 | 2.609100e-52 | -8.615850e-47 |
| Msa0596430 | Msa1376590 | 0.801837 | 7.458329e-49 | -8.615850e-47 |
| Msa0596430 | Msa1381130 | 0.827752 | 1.315382e-54 | -8.615850e-47 |
| Msa0596430 | Msa1393200 | 0.827323 | 1.667301e-54 | -8.615850e-47 |
| Msa0596430 | Msa1398740 | 0.807293 | 5.425625e-50 | -8.615850e-47 |
| Msa0596430 | Msa1398840 | 0.809133 | 2.200054e-50 | -8.615850e-47 |
| Msa0596430 | Msa1405770 | 0.812751 | 3.620560e-51 | -8.615850e-47 |
| Msa0596430 | Msa1406230 | 0.837707 | 4.433786e-57 | -8.615850e-47 |
| Msa0596430 | Msa1406550 | 0.807907 | 4.019500e-50 | -8.615850e-47 |
| Msa0596430 | Msa1407710 | 0.805827 | 1.106017e-49 | -8.615850e-47 |
| Msa0596430 | Msa1410170 | 0.800952 | 1.131941e-48 | -8.615850e-47 |
| Msa0596430 | Msa1415250 | 0.829731 | 4.368943e-55 | -8.615850e-47 |
| Msa0596430 | Msa1416460 | 0.828415 | 9.103759e-55 | -8.615850e-47 |
| Msa0596430 | Msa1422490 | 0.835352 | 1.764500e-56 | -8.615850e-47 |
| Msa0596430 | Msa1423190 | 0.814229 | 1.713628e-51 | -8.615850e-47 |
| Msa0596430 | Msa1424240 | 0.808344 | 3.243788e-50 | -8.615850e-47 |
| Msa0596430 | Msa1426870 | 0.821012 | 5.062783e-53 | -8.615850e-47 |
| Msa0596430 | Msa1427020 | 0.824655 | 7.174966e-54 | -8.615850e-47 |
| Msa0596430 | Msa1428990 | 0.820560 | 6.431505e-53 | -8.615850e-47 |
| Msa0596430 | Msa1432470 | 0.822484 | 2.311367e-53 | -8.615850e-47 |
| Msa0596430 | Msa1439800 | 0.821639 | 3.628317e-53 | -8.615850e-47 |
| Msa0596430 | Msa1444750 | 0.802734 | 4.874697e-49 | -8.615850e-47 |
| Msa0596430 | Msa1449320 | 0.811357 | 7.291776e-51 | -8.615850e-47 |
| Msa0596430 | Msa1449680 | 0.815708 | 8.051101e-52 | -8.615850e-47 |
| Msa0596430 | Msa1451840 | 0.808691 | 2.735035e-50 | -8.615850e-47 |
| Msa0596430 | Msa1458330 | 0.862973 | 3.467589e-64 | -8.615850e-47 |
| Msa0596430 | Msa1458920 | 0.821131 | 4.752700e-53 | -8.615850e-47 |
| Msa0596430 | Msa1464800 | 0.807185 | 5.717786e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0596430 | MtrunA17_Chr4g0018191 | 92.814 | 167 | 12 | 0 | 1 | 167 | 30 | 196 | 3.51e-105 | 299 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0596430 | AT5G51545.1 | 41.935 | 186 | 80 | 4 | 1 | 163 | 1 | 181 | 2.15e-38 | 129 |
Find 39 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCGGATTACGCCGAATTA+TGG | 0.208770 | 4_2:+26704630 | None:intergenic |
| AGGAAATTGTCCCACTCTTC+TGG | 0.220374 | 4_2:+26702073 | None:intergenic |
| GAAGAGAGTGCTGTTGAAAA+AGG | 0.238655 | 4_2:-26704556 | Msa0596430:CDS |
| ATTCTTGCTTGGCTTGGTTT+TGG | 0.260061 | 4_2:-26704529 | Msa0596430:CDS |
| GGTATTGCTCTTGCTGCTTC+AGG | 0.275480 | 4_2:-26704487 | Msa0596430:intron |
| AACAAAACTGGTGTGGGTTT+TGG | 0.286345 | 4_2:-26704709 | Msa0596430:CDS |
| ACAGTATTATTGTTTCTTGC+TGG | 0.296795 | 4_2:-26702019 | Msa0596430:CDS |
| CTTGCTGGAGCAGTAGCATT+TGG | 0.343726 | 4_2:-26702004 | Msa0596430:CDS |
| GAGAAAGAGCTTCCATAATT+CGG | 0.373166 | 4_2:-26704642 | Msa0596430:CDS |
| TCGGACTTGATTGTGAAGAT+AGG | 0.376155 | 4_2:+26704763 | None:intergenic |
| TTCCATAATTCGGCGTAATC+CGG | 0.391053 | 4_2:-26704632 | Msa0596430:CDS |
| GGTTCGGTTATTCTTGTTGA+GGG | 0.408372 | 4_2:-26704508 | Msa0596430:CDS |
| GATTCAGTTCCCAACAAAAC+TGG | 0.426754 | 4_2:-26704721 | Msa0596430:CDS |
| AGAGAATGAGTGATGTAGTT+TGG | 0.434413 | 4_2:+26704786 | None:intergenic |
| CAATAATACTGTAGGGGTAA+AGG | 0.457025 | 4_2:+26702030 | None:intergenic |
| CGAATGGCAACAACACTAAA+CGG | 0.483957 | 4_2:-26704681 | Msa0596430:CDS |
| GCAAGAAACAATAATACTGT+AGG | 0.502406 | 4_2:+26702022 | None:intergenic |
| AACACTAAACGGAAACAGAA+AGG | 0.503067 | 4_2:-26704670 | Msa0596430:CDS |
| CAAGAAACAATAATACTGTA+GGG | 0.504164 | 4_2:+26702023 | None:intergenic |
| TGTTAGAAATCTCTAATGTC+CGG | 0.506879 | 4_2:-26701918 | Msa0596430:three_prime_UTR |
| TGGTTCGGTTATTCTTGTTG+AGG | 0.511249 | 4_2:-26704509 | Msa0596430:CDS |
| TTAGTGTTGTTGCCATTCGA+CGG | 0.524904 | 4_2:+26704685 | None:intergenic |
| AATTGTTCCGAAACGAAAGC+CGG | 0.532646 | 4_2:+26704601 | None:intergenic |
| ACACTAAACGGAAACAGAAA+GGG | 0.536364 | 4_2:-26704669 | Msa0596430:CDS |
| AATGAGTGATGTAGTTTGGT+GGG | 0.564862 | 4_2:+26704790 | None:intergenic |
| GTGATGTAGTTTGGTGGGGA+AGG | 0.567049 | 4_2:+26704795 | None:intergenic |
| GTTCCCAACAAAACTGGTGT+GGG | 0.575858 | 4_2:-26704715 | Msa0596430:CDS |
| AGTTCCCAACAAAACTGGTG+TGG | 0.579102 | 4_2:-26704716 | Msa0596430:CDS |
| ACTGAATCGGACGGTTCAGA+AGG | 0.586590 | 4_2:+26704736 | None:intergenic |
| AATACTGTAGGGGTAAAGGA+TGG | 0.613012 | 4_2:+26702034 | None:intergenic |
| TGGAGCTTAGTTTCACCACA+TGG | 0.617051 | 4_2:+26704863 | None:intergenic |
| GAATGAGTGATGTAGTTTGG+TGG | 0.628646 | 4_2:+26704789 | None:intergenic |
| TAAGCAGAATGAGAAACTCA+CGG | 0.646278 | 4_2:-26701969 | Msa0596430:CDS |
| AAGAAACAATAATACTGTAG+GGG | 0.647405 | 4_2:+26702024 | None:intergenic |
| TTCTTATGCAAACATAGACA+AGG | 0.661701 | 4_2:+26701805 | None:intergenic |
| ATGAGTGATGTAGTTTGGTG+GGG | 0.673147 | 4_2:+26704791 | None:intergenic |
| TTGTTGGGAACTGAATCGGA+CGG | 0.702263 | 4_2:+26704727 | None:intergenic |
| ATGGATAGAGATACTTGACA+AGG | 0.707055 | 4_2:+26702053 | None:intergenic |
| TGGAGCAGTAGCATTTGGAG+TGG | 0.720186 | 4_2:-26701999 | Msa0596430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAGATAAATAATGAT+AGG | - | chr4_2:26702621-26702640 | Msa0596430:intron | 10.0% |
| !! | AATTAAGATAAATAATGATA+GGG | - | chr4_2:26702622-26702641 | Msa0596430:intron | 10.0% |
| !! | TTAATACTATTTATTATTCA+AGG | - | chr4_2:26704255-26704274 | Msa0596430:intron | 10.0% |
| !! | CATATATATATATATGAAAA+TGG | - | chr4_2:26704892-26704911 | Msa0596430:five_prime_UTR | 10.0% |
| !!! | TATAATGAGTTTTCAAAATT+AGG | + | chr4_2:26702226-26702245 | None:intergenic | 15.0% |
| !!! | TTATTTTCAATTAAGGTTAT+AGG | - | chr4_2:26702594-26702613 | Msa0596430:intron | 15.0% |
| !!! | TTAGTTTAAATCTTTTGTTT+TGG | - | chr4_2:26702989-26703008 | Msa0596430:intron | 15.0% |
| !!! | TATTTTGTCATTTTTTACAT+AGG | + | chr4_2:26703489-26703508 | None:intergenic | 15.0% |
| !!! | ATGTTCATTTAAAAATTTTG+AGG | - | chr4_2:26704300-26704319 | Msa0596430:intron | 15.0% |
| !! | TTGAAGTAGTTTATCAAAAA+TGG | - | chr4_2:26702669-26702688 | Msa0596430:intron | 20.0% |
| !! | TAATTATAAGCTCAAAAAAC+AGG | - | chr4_2:26702767-26702786 | Msa0596430:intron | 20.0% |
| !! | GATCTTTACTCTAAATTTAA+AGG | + | chr4_2:26703350-26703369 | None:intergenic | 20.0% |
| !!! | ATTAGAATTTAGGATCTAAA+TGG | - | chr4_2:26703885-26703904 | Msa0596430:intron | 20.0% |
| !!! | TTAGAATTTAGGATCTAAAT+GGG | - | chr4_2:26703886-26703905 | Msa0596430:intron | 20.0% |
| !! | TTTGTTGAAATTAATGATTG+AGG | - | chr4_2:26703931-26703950 | Msa0596430:intron | 20.0% |
| !! | AGAAATGAAAAACATTAGTT+TGG | + | chr4_2:26704327-26704346 | None:intergenic | 20.0% |
| !!! | TTCATGATTTTGTTTTCTTA+TGG | - | chr4_2:26704800-26704819 | Msa0596430:CDS | 20.0% |
| !!! | AAAAAGGTTTTATTCTTGCT+TGG | - | chr4_2:26702112-26702131 | Msa0596430:intron | 25.0% |
| ! | TTGCAGTTAGAGTAAATTAA+GGG | - | chr4_2:26702280-26702299 | Msa0596430:intron | 25.0% |
| !! | TTTTCAATTAAGGTTATAGG+AGG | - | chr4_2:26702597-26702616 | Msa0596430:intron | 25.0% |
| ! | TTTCAATTAAGGTTATAGGA+GGG | - | chr4_2:26702598-26702617 | Msa0596430:intron | 25.0% |
| !!! | CTAATAAGCTGTTTTCTTAA+GGG | + | chr4_2:26702807-26702826 | None:intergenic | 25.0% |
| !!! | TCTAATAAGCTGTTTTCTTA+AGG | + | chr4_2:26702808-26702827 | None:intergenic | 25.0% |
| ! | ATAAGAGATTATGCTATAAG+CGG | - | chr4_2:26703048-26703067 | Msa0596430:intron | 25.0% |
| !! | GGAAGTATATATGTTAGAAT+AGG | - | chr4_2:26703233-26703252 | Msa0596430:intron | 25.0% |
| !! | TAGTGTTGAAAGTTTGAATA+TGG | - | chr4_2:26703550-26703569 | Msa0596430:intron | 25.0% |
| !! | TGTATTTGAATGCTATGTTT+TGG | - | chr4_2:26703827-26703846 | Msa0596430:intron | 25.0% |
| !! | GTATTTGAATGCTATGTTTT+GGG | - | chr4_2:26703828-26703847 | Msa0596430:intron | 25.0% |
| !!! | GGATTTATTTTTATTCTCTC+TGG | - | chr4_2:26704064-26704083 | Msa0596430:intron | 25.0% |
| !!! | TAACTCGTTCTTTAGAATAA+AGG | + | chr4_2:26704402-26704421 | None:intergenic | 25.0% |
| ! | GTAAAATGACACTAATTCTT+AGG | + | chr4_2:26704513-26704532 | None:intergenic | 25.0% |
| ! | AAGAAACAATAATACTGTAG+GGG | + | chr4_2:26704631-26704650 | None:intergenic | 25.0% |
| ! | CAAGAAACAATAATACTGTA+GGG | + | chr4_2:26704632-26704651 | None:intergenic | 25.0% |
| ATCAGAAAAAAGAAACCATG+TGG | - | chr4_2:26701774-26701793 | Msa0596430:three_prime_UTR | 30.0% | |
| !!! | CATTTTTGTTTTGTTGGAGT+TGG | + | chr4_2:26701812-26701831 | None:intergenic | 30.0% |
| CAACTCCAACAAAACAAAAA+TGG | - | chr4_2:26701810-26701829 | Msa0596430:three_prime_UTR | 30.0% | |
| GTTGCAGTTAGAGTAAATTA+AGG | - | chr4_2:26702279-26702298 | Msa0596430:intron | 30.0% | |
| ! | GAGTAAATTAAGGGTATGTT+TGG | - | chr4_2:26702289-26702308 | Msa0596430:intron | 30.0% |
| ! | AATTAAGGGTATGTTTGGAT+TGG | - | chr4_2:26702294-26702313 | Msa0596430:intron | 30.0% |
| ! | ATTTGAGCTAACTTGTAAGA+CGG | - | chr4_2:26702320-26702339 | Msa0596430:intron | 30.0% |
| AAACATTACTAAACCCACTT+GGG | + | chr4_2:26702499-26702518 | None:intergenic | 30.0% | |
| AACTACTTCAAGTAGCTAAT+AGG | + | chr4_2:26702660-26702679 | None:intergenic | 30.0% | |
| ATCAAAAATGGCAATAAGCT+TGG | - | chr4_2:26702681-26702700 | Msa0596430:intron | 30.0% | |
| TCAAAAATGGCAATAAGCTT+GGG | - | chr4_2:26702682-26702701 | Msa0596430:intron | 30.0% | |
| ! | TGTTTTCTTAAGGGTCTTTT+TGG | + | chr4_2:26702798-26702817 | None:intergenic | 30.0% |
| AAGTTATCCTAGAAAGCTTA+TGG | + | chr4_2:26702958-26702977 | None:intergenic | 30.0% | |
| ! | TCGTACTTCTCTTTCTTTTA+GGG | + | chr4_2:26703123-26703142 | None:intergenic | 30.0% |
| ! | TTCGTACTTCTCTTTCTTTT+AGG | + | chr4_2:26703124-26703143 | None:intergenic | 30.0% |
| GTTCTATTGAAGTTTAGAGA+TGG | - | chr4_2:26703517-26703536 | Msa0596430:intron | 30.0% | |
| TTTGAATATGGCTGAAGAAT+TGG | - | chr4_2:26703562-26703581 | Msa0596430:intron | 30.0% | |
| ACAGAAATTATCAGATTACC+CGG | + | chr4_2:26703721-26703740 | None:intergenic | 30.0% | |
| TGGGAGGAAAAATAAAGTAT+CGG | - | chr4_2:26704151-26704170 | Msa0596430:intron | 30.0% | |
| ! | ACTCTGATACTTTCATTTTC+GGG | + | chr4_2:26704207-26704226 | None:intergenic | 30.0% |
| ! | CACTCTGATACTTTCATTTT+CGG | + | chr4_2:26704208-26704227 | None:intergenic | 30.0% |
| CTGATTAAGATACAATAGCT+TGG | + | chr4_2:26704463-26704482 | None:intergenic | 30.0% | |
| ! | CTTAATCAGTTAGTTGACTT+AGG | - | chr4_2:26704474-26704493 | Msa0596430:intron | 30.0% |
| GCAAGAAACAATAATACTGT+AGG | + | chr4_2:26704633-26704652 | None:intergenic | 30.0% | |
| ! | ACAGTATTATTGTTTCTTGC+TGG | - | chr4_2:26704633-26704652 | Msa0596430:CDS | 30.0% |
| TGTTAGAAATCTCTAATGTC+CGG | - | chr4_2:26704734-26704753 | Msa0596430:CDS | 30.0% | |
| TTCTTATGCAAACATAGACA+AGG | + | chr4_2:26704850-26704869 | None:intergenic | 30.0% | |
| !!! | TAGCGCCATTTTTGTTTTGT+TGG | + | chr4_2:26701818-26701837 | None:intergenic | 35.0% |
| AATGAGTGATGTAGTTTGGT+GGG | + | chr4_2:26701865-26701884 | None:intergenic | 35.0% | |
| AGAGAATGAGTGATGTAGTT+TGG | + | chr4_2:26701869-26701888 | None:intergenic | 35.0% | |
| !!! | AGTTTTGTTGGGAACTGAAT+CGG | + | chr4_2:26701932-26701951 | None:intergenic | 35.0% |
| AACACTAAACGGAAACAGAA+AGG | - | chr4_2:26701982-26702001 | Msa0596430:CDS | 35.0% | |
| ACACTAAACGGAAACAGAAA+GGG | - | chr4_2:26701983-26702002 | Msa0596430:CDS | 35.0% | |
| GAGAAAGAGCTTCCATAATT+CGG | - | chr4_2:26702010-26702029 | Msa0596430:CDS | 35.0% | |
| ! | TCGGTTATAAGCTAGCTTAT+CGG | + | chr4_2:26702392-26702411 | None:intergenic | 35.0% |
| ! | AGCTAGCTTATAACCGATAA+CGG | - | chr4_2:26702395-26702414 | Msa0596430:intron | 35.0% |
| !!! | AGCTAGCTTTTATCCGTTAT+CGG | + | chr4_2:26702411-26702430 | None:intergenic | 35.0% |
| CAAACATTACTAAACCCACT+TGG | + | chr4_2:26702500-26702519 | None:intergenic | 35.0% | |
| ! | CAAGTGGGTTTAGTAATGTT+TGG | - | chr4_2:26702498-26702517 | Msa0596430:intron | 35.0% |
| CGTATTTCCATAAGCTTTCT+AGG | - | chr4_2:26702948-26702967 | Msa0596430:intron | 35.0% | |
| GTACGAATTTGCAATCAACA+TGG | - | chr4_2:26703137-26703156 | Msa0596430:intron | 35.0% | |
| GATTTGATTAGCAGTGTGTA+TGG | - | chr4_2:26703212-26703231 | Msa0596430:intron | 35.0% | |
| !! | GAAACTAGTCTCTGATTTTC+TGG | - | chr4_2:26703289-26703308 | Msa0596430:intron | 35.0% |
| CGTCACTTCTTAAAGAGTTT+AGG | - | chr4_2:26703444-26703463 | Msa0596430:intron | 35.0% | |
| ATTACCAATTTGGACCAACA+GGG | + | chr4_2:26703689-26703708 | None:intergenic | 35.0% | |
| TATTACCAATTTGGACCAAC+AGG | + | chr4_2:26703690-26703709 | None:intergenic | 35.0% | |
| ! | GGTCCAAATTGGTAATAGAA+AGG | - | chr4_2:26703693-26703712 | Msa0596430:intron | 35.0% |
| GGTCCTTTCTATTACCAATT+TGG | + | chr4_2:26703699-26703718 | None:intergenic | 35.0% | |
| ! | AATTGGTAATAGAAAGGACC+CGG | - | chr4_2:26703699-26703718 | Msa0596430:intron | 35.0% |
| CAGAAATTATCAGATTACCC+GGG | + | chr4_2:26703720-26703739 | None:intergenic | 35.0% | |
| TGGTTGTGTTAATGCTCTAA+GGG | + | chr4_2:26703862-26703881 | None:intergenic | 35.0% | |
| ! | TTAGAGCATTAACACAACCA+GGG | - | chr4_2:26703862-26703881 | Msa0596430:intron | 35.0% |
| ACAACCAGGGATTAGAATTT+AGG | - | chr4_2:26703875-26703894 | Msa0596430:intron | 35.0% | |
| AGATCCTAAATTCTAATCCC+TGG | + | chr4_2:26703882-26703901 | None:intergenic | 35.0% | |
| AGGATCTAAATGGGAAAAGT+AGG | - | chr4_2:26703895-26703914 | Msa0596430:intron | 35.0% | |
| GGATCTAAATGGGAAAAGTA+GGG | - | chr4_2:26703896-26703915 | Msa0596430:intron | 35.0% | |
| ACTCTTCTTCTTCTTCTTCA+TGG | + | chr4_2:26704000-26704019 | None:intergenic | 35.0% | |
| TGAAGAAGAAGAAGAAGAGT+TGG | - | chr4_2:26704000-26704019 | Msa0596430:intron | 35.0% | |
| ACTCTCGATATGTTGTCAAT+AGG | + | chr4_2:26704038-26704057 | None:intergenic | 35.0% | |
| AGAGACTATCACGTACAATA+TGG | - | chr4_2:26704131-26704150 | Msa0596430:intron | 35.0% | |
| GAGACTATCACGTACAATAT+GGG | - | chr4_2:26704132-26704151 | Msa0596430:intron | 35.0% | |
| GACACTAATTCTTAGGTTCT+AGG | + | chr4_2:26704506-26704525 | None:intergenic | 35.0% | |
| !! | GTCATTTTACATCGATACTG+TGG | - | chr4_2:26704523-26704542 | Msa0596430:CDS | 35.0% |
| CGATACTGTGGTTAATACTT+TGG | - | chr4_2:26704535-26704554 | Msa0596430:CDS | 35.0% | |
| ! | ATACTTTGGTGTGTTATTGC+AGG | - | chr4_2:26704549-26704568 | Msa0596430:CDS | 35.0% |
| ATGGATAGAGATACTTGACA+AGG | + | chr4_2:26704602-26704621 | None:intergenic | 35.0% | |
| CAATAATACTGTAGGGGTAA+AGG | + | chr4_2:26704625-26704644 | None:intergenic | 35.0% | |
| TAAGCAGAATGAGAAACTCA+CGG | - | chr4_2:26704683-26704702 | Msa0596430:CDS | 35.0% | |
| !!! | GTCACTCATAGTACTTTTTC+CGG | + | chr4_2:26704756-26704775 | None:intergenic | 35.0% |
| ! | ATGAGTGATGTAGTTTGGTG+GGG | + | chr4_2:26701864-26701883 | None:intergenic | 40.0% |
| GAATGAGTGATGTAGTTTGG+TGG | + | chr4_2:26701866-26701885 | None:intergenic | 40.0% | |
| TCGGACTTGATTGTGAAGAT+AGG | + | chr4_2:26701892-26701911 | None:intergenic | 40.0% | |
| GATTCAGTTCCCAACAAAAC+TGG | - | chr4_2:26701931-26701950 | Msa0596430:three_prime_UTR | 40.0% | |
| !!! | AAACCCACACCAGTTTTGTT+GGG | + | chr4_2:26701943-26701962 | None:intergenic | 40.0% |
| !! | AAAACCCACACCAGTTTTGT+TGG | + | chr4_2:26701944-26701963 | None:intergenic | 40.0% |
| ! | AACAAAACTGGTGTGGGTTT+TGG | - | chr4_2:26701943-26701962 | Msa0596430:exon | 40.0% |
| ! | TTAGTGTTGTTGCCATTCGA+CGG | + | chr4_2:26701970-26701989 | None:intergenic | 40.0% |
| CGAATGGCAACAACACTAAA+CGG | - | chr4_2:26701971-26701990 | Msa0596430:CDS | 40.0% | |
| TTCCATAATTCGGCGTAATC+CGG | - | chr4_2:26702020-26702039 | Msa0596430:CDS | 40.0% | |
| ! | TGAAAAACCGGCTTTCGTTT+CGG | - | chr4_2:26702044-26702063 | Msa0596430:CDS | 40.0% |
| AATTGTTCCGAAACGAAAGC+CGG | + | chr4_2:26702054-26702073 | None:intergenic | 40.0% | |
| !! | GAAGAGAGTGCTGTTGAAAA+AGG | - | chr4_2:26702096-26702115 | Msa0596430:intron | 40.0% |
| !!! | GGTTTTATTCTTGCTTGGCT+TGG | - | chr4_2:26702117-26702136 | Msa0596430:intron | 40.0% |
| !!! | ATTCTTGCTTGGCTTGGTTT+TGG | - | chr4_2:26702123-26702142 | Msa0596430:intron | 40.0% |
| !! | TGGTTCGGTTATTCTTGTTG+AGG | - | chr4_2:26702143-26702162 | Msa0596430:intron | 40.0% |
| ! | GGTTCGGTTATTCTTGTTGA+GGG | - | chr4_2:26702144-26702163 | Msa0596430:intron | 40.0% |
| ! | AGCTAACTTGTAAGACGGTT+TGG | - | chr4_2:26702325-26702344 | Msa0596430:intron | 40.0% |
| ATAAGCTTGGGAGAAAGTGA+TGG | - | chr4_2:26702694-26702713 | Msa0596430:intron | 40.0% | |
| GTCTCTTAAGCATGTGGTTT+GGG | - | chr4_2:26703190-26703209 | Msa0596430:intron | 40.0% | |
| ! | GAATAGGTCAGCCTCTTTTA+TGG | - | chr4_2:26703249-26703268 | Msa0596430:intron | 40.0% |
| GGTACGGAAATCCATAAAAG+AGG | + | chr4_2:26703263-26703282 | None:intergenic | 40.0% | |
| !! | CTAGTCTCTGATTTTCTGGT+TGG | - | chr4_2:26703293-26703312 | Msa0596430:intron | 40.0% |
| !! | TTTCTGGTTGGAGGATAACT+TGG | - | chr4_2:26703305-26703324 | Msa0596430:intron | 40.0% |
| ! | TTCTGGTTGGAGGATAACTT+GGG | - | chr4_2:26703306-26703325 | Msa0596430:intron | 40.0% |
| GTGTCATGTTTGTGCATCAT+AGG | + | chr4_2:26703377-26703396 | None:intergenic | 40.0% | |
| GTGACAAAATAACCCAAGTC+CGG | - | chr4_2:26703627-26703646 | Msa0596430:intron | 40.0% | |
| ! | ATTGGTAATAGAAAGGACCC+GGG | - | chr4_2:26703700-26703719 | Msa0596430:intron | 40.0% |
| !! | GAATGCTATGTTTTGGGCTT+AGG | - | chr4_2:26703834-26703853 | Msa0596430:intron | 40.0% |
| !! | GTTGTGTTAATGCTCTAAGG+GGG | + | chr4_2:26703860-26703879 | None:intergenic | 40.0% |
| ! | GGTTGTGTTAATGCTCTAAG+GGG | + | chr4_2:26703861-26703880 | None:intergenic | 40.0% |
| CTGGTTGTGTTAATGCTCTA+AGG | + | chr4_2:26703863-26703882 | None:intergenic | 40.0% | |
| ! | CTTAGAGCATTAACACAACC+AGG | - | chr4_2:26703861-26703880 | Msa0596430:intron | 40.0% |
| ! | CAACATATCGAGAGTGTGTA+AGG | - | chr4_2:26704043-26704062 | Msa0596430:intron | 40.0% |
| ACTATCACGTACAATATGGG+AGG | - | chr4_2:26704135-26704154 | Msa0596430:intron | 40.0% | |
| ACTATGACCCAAACCTAAGA+TGG | - | chr4_2:26704434-26704453 | Msa0596430:intron | 40.0% | |
| TTGGAGACCATCTTAGGTTT+GGG | + | chr4_2:26704444-26704463 | None:intergenic | 40.0% | |
| AATAGCTTGGAGACCATCTT+AGG | + | chr4_2:26704450-26704469 | None:intergenic | 40.0% | |
| !!! | AGGCTTTTTTCCAGAAGAGT+GGG | - | chr4_2:26704569-26704588 | Msa0596430:CDS | 40.0% |
| AATACTGTAGGGGTAAAGGA+TGG | + | chr4_2:26704621-26704640 | None:intergenic | 40.0% | |
| TGGAGCTTAGTTTCACCACA+TGG | + | chr4_2:26701792-26701811 | None:intergenic | 45.0% | |
| ! | GGACGGTTCAGAAGGTTTTT+CGG | + | chr4_2:26701911-26701930 | None:intergenic | 45.0% |
| TTGTTGGGAACTGAATCGGA+CGG | + | chr4_2:26701928-26701947 | None:intergenic | 45.0% | |
| AGTTCCCAACAAAACTGGTG+TGG | - | chr4_2:26701936-26701955 | Msa0596430:three_prime_UTR | 45.0% | |
| GTTCCCAACAAAACTGGTGT+GGG | - | chr4_2:26701937-26701956 | Msa0596430:three_prime_UTR | 45.0% | |
| AACCGGATTACGCCGAATTA+TGG | + | chr4_2:26702025-26702044 | None:intergenic | 45.0% | |
| GCGTAATCCGGTTGAAAAAC+CGG | - | chr4_2:26702032-26702051 | Msa0596430:CDS | 45.0% | |
| !! | ACGAAAGCCGGTTTTTCAAC+CGG | + | chr4_2:26702042-26702061 | None:intergenic | 45.0% |
| !!! | TGCTTGGCTTGGTTTTGGTT+CGG | - | chr4_2:26702128-26702147 | Msa0596430:intron | 45.0% |
| AGCTAGCTGATGAGACCTAT+AGG | - | chr4_2:26702423-26702442 | Msa0596430:intron | 45.0% | |
| TAGCTGATGAGACCTATAGG+AGG | - | chr4_2:26702426-26702445 | Msa0596430:intron | 45.0% | |
| TTGGAGTATGCTCCTCCTAT+AGG | + | chr4_2:26702441-26702460 | None:intergenic | 45.0% | |
| ! | TATAGGAGGAGCATACTCCA+AGG | - | chr4_2:26702440-26702459 | Msa0596430:intron | 45.0% |
| GCAATCAACATGGTGTGACA+TGG | - | chr4_2:26703147-26703166 | Msa0596430:intron | 45.0% | |
| !! | GGTTGACTTGAGAGATAACC+AGG | - | chr4_2:26703168-26703187 | Msa0596430:intron | 45.0% |
| AACCAGGTCTCTTAAGCATG+TGG | - | chr4_2:26703184-26703203 | Msa0596430:intron | 45.0% | |
| AACCACATGCTTAAGAGACC+TGG | + | chr4_2:26703189-26703208 | None:intergenic | 45.0% | |
| GGTCTCTTAAGCATGTGGTT+TGG | - | chr4_2:26703189-26703208 | Msa0596430:intron | 45.0% | |
| !! | GACTAGTTTCTCTCGAGGTA+CGG | + | chr4_2:26703279-26703298 | None:intergenic | 45.0% |
| !! | TCAGAGACTAGTTTCTCTCG+AGG | + | chr4_2:26703284-26703303 | None:intergenic | 45.0% |
| !!! | GTCTCTGATTTTCTGGTTGG+AGG | - | chr4_2:26703296-26703315 | Msa0596430:intron | 45.0% |
| CTTGGAGACCATCTTAGGTT+TGG | + | chr4_2:26704445-26704464 | None:intergenic | 45.0% | |
| !!! | CAGGCTTTTTTCCAGAAGAG+TGG | - | chr4_2:26704568-26704587 | Msa0596430:CDS | 45.0% |
| AGGAAATTGTCCCACTCTTC+TGG | + | chr4_2:26704582-26704601 | None:intergenic | 45.0% | |
| !!! | TTTTATTTTATTTTCAATTA+AGG | - | chr4_2:26702587-26702606 | Msa0596430:intron | 5.0% |
| ! | GTGATGTAGTTTGGTGGGGA+AGG | + | chr4_2:26701860-26701879 | None:intergenic | 50.0% |
| ACTGAATCGGACGGTTCAGA+AGG | + | chr4_2:26701919-26701938 | None:intergenic | 50.0% | |
| ! | GGTATTGCTCTTGCTGCTTC+AGG | - | chr4_2:26702165-26702184 | Msa0596430:intron | 50.0% |
| GCTTATCGGTCATGCGCTAA+AGG | + | chr4_2:26702378-26702397 | None:intergenic | 50.0% | |
| !! | TAAACCCACTTGGGTTAGCC+TGG | + | chr4_2:26702490-26702509 | None:intergenic | 50.0% |
| TTTGGACCAACAGGGACTGT+GGG | + | chr4_2:26703681-26703700 | None:intergenic | 50.0% | |
| ATTTGGACCAACAGGGACTG+TGG | + | chr4_2:26703682-26703701 | None:intergenic | 50.0% | |
| CAGTCCCTGTTGGTCCAAAT+TGG | - | chr4_2:26703682-26703701 | Msa0596430:intron | 50.0% | |
| CTTGCTGGAGCAGTAGCATT+TGG | - | chr4_2:26704648-26704667 | Msa0596430:CDS | 50.0% | |
| TGGAGCAGTAGCATTTGGAG+TGG | - | chr4_2:26704653-26704672 | Msa0596430:CDS | 50.0% | |
| !! | GTGGGTTTTGGTCCGTCGAA+TGG | - | chr4_2:26701955-26701974 | Msa0596430:exon | 55.0% |
| ! | TGCTCTTGCTGCTTCAGGTC+AGG | - | chr4_2:26702170-26702189 | Msa0596430:intron | 55.0% |
| !! | TGGACCAGTAGTGCTGGCTT+GGG | + | chr4_2:26702467-26702486 | None:intergenic | 55.0% |
| TCCACCAGGCTAACCCAAGT+GGG | - | chr4_2:26702483-26702502 | Msa0596430:intron | 55.0% | |
| TTGGGTTTGGCTGTGTAGGC+CGG | + | chr4_2:26703649-26703668 | None:intergenic | 55.0% | |
| GACGTTGGGTTTGGCTGTGT+AGG | + | chr4_2:26703653-26703672 | None:intergenic | 55.0% | |
| ACAGCCAAACCCAACGTCCA+AGG | - | chr4_2:26703655-26703674 | Msa0596430:intron | 55.0% | |
| !! | GTAGTGCTGGCTTGGGACCT+TGG | + | chr4_2:26702460-26702479 | None:intergenic | 60.0% |
| AGGTCCCAAGCCAGCACTAC+TGG | - | chr4_2:26702460-26702479 | Msa0596430:intron | 60.0% | |
| !! | GTGGACCAGTAGTGCTGGCT+TGG | + | chr4_2:26702468-26702487 | None:intergenic | 60.0% |
| GTCCACCAGGCTAACCCAAG+TGG | - | chr4_2:26702482-26702501 | Msa0596430:intron | 60.0% | |
| !! | ACCCACTTGGGTTAGCCTGG+TGG | + | chr4_2:26702487-26702506 | None:intergenic | 60.0% |
| TGGCTGTGTAGGCCGGACTT+GGG | + | chr4_2:26703642-26703661 | None:intergenic | 60.0% | |
| TTGGCTGTGTAGGCCGGACT+TGG | + | chr4_2:26703643-26703662 | None:intergenic | 60.0% | |
| TGGGCCTTGGACGTTGGGTT+TGG | + | chr4_2:26703662-26703681 | None:intergenic | 60.0% | |
| GACTGTGGGCCTTGGACGTT+GGG | + | chr4_2:26703667-26703686 | None:intergenic | 60.0% | |
| GCCAGCACTACTGGTCCACC+AGG | - | chr4_2:26702469-26702488 | Msa0596430:intron | 65.0% | |
| ! | GCCTGGTGGACCAGTAGTGC+TGG | + | chr4_2:26702473-26702492 | None:intergenic | 65.0% |
| GGACTGTGGGCCTTGGACGT+TGG | + | chr4_2:26703668-26703687 | None:intergenic | 65.0% | |
| CCAACAGGGACTGTGGGCCT+TGG | + | chr4_2:26703675-26703694 | None:intergenic | 65.0% | |
| CCAAGGCCCACAGTCCCTGT+TGG | - | chr4_2:26703672-26703691 | Msa0596430:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 26701749 | 26704925 | 26701749 | ID=Msa0596430;Name=Msa0596430 |
| chr4_2 | mRNA | 26701749 | 26704925 | 26701749 | ID=Msa0596430-mRNA-1;Parent=Msa0596430;Name=Msa0596430-mRNA-1;_AED=0.02;_eAED=0.02;_QI=80|1|1|1|1|1|2|209|167 |
| chr4_2 | exon | 26701749 | 26702103 | 26701749 | ID=Msa0596430-mRNA-1:exon:7108;Parent=Msa0596430-mRNA-1 |
| chr4_2 | exon | 26704488 | 26704925 | 26704488 | ID=Msa0596430-mRNA-1:exon:7107;Parent=Msa0596430-mRNA-1 |
| chr4_2 | five_prime_UTR | 26704846 | 26704925 | 26704846 | ID=Msa0596430-mRNA-1:five_prime_utr;Parent=Msa0596430-mRNA-1 |
| chr4_2 | CDS | 26704488 | 26704845 | 26704488 | ID=Msa0596430-mRNA-1:cds;Parent=Msa0596430-mRNA-1 |
| chr4_2 | CDS | 26701958 | 26702103 | 26701958 | ID=Msa0596430-mRNA-1:cds;Parent=Msa0596430-mRNA-1 |
| chr4_2 | three_prime_UTR | 26701749 | 26701957 | 26701749 | ID=Msa0596430-mRNA-1:three_prime_utr;Parent=Msa0596430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
