Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646730 | XP_003606937.1 | 96.440 | 309 | 11 | 0 | 1 | 309 | 1 | 309 | 0.0 | 612 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646730 | sp|O65679|PILR3_ARATH | 64.286 | 308 | 103 | 2 | 2 | 309 | 6 | 306 | 7.79e-146 | 415 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646730 | G7JHC4 | 96.440 | 309 | 11 | 0 | 1 | 309 | 1 | 309 | 0.0 | 612 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa0646730 | 0.804284 | 2.325926e-49 | -8.615850e-47 |
| Msa0005690 | Msa0646730 | 0.802904 | 4.496028e-49 | -8.615850e-47 |
| Msa0008250 | Msa0646730 | 0.811355 | 7.297799e-51 | -8.615850e-47 |
| Msa0015220 | Msa0646730 | 0.816075 | 6.666988e-52 | -8.615850e-47 |
| Msa0017980 | Msa0646730 | 0.804449 | 2.149077e-49 | -8.615850e-47 |
| Msa0024320 | Msa0646730 | 0.800388 | 1.475668e-48 | -8.615850e-47 |
| Msa0028410 | Msa0646730 | 0.807326 | 5.339004e-50 | -8.615850e-47 |
| Msa0028450 | Msa0646730 | 0.816114 | 6.535354e-52 | -8.615850e-47 |
| Msa0030760 | Msa0646730 | 0.801617 | 8.272882e-49 | -8.615850e-47 |
| Msa0032040 | Msa0646730 | 0.805124 | 1.553357e-49 | -8.615850e-47 |
| Msa0040190 | Msa0646730 | 0.810828 | 9.494459e-51 | -8.615850e-47 |
| Msa0046090 | Msa0646730 | 0.808259 | 3.380876e-50 | -8.615850e-47 |
| Msa0054760 | Msa0646730 | 0.831642 | 1.487068e-55 | -8.615850e-47 |
| Msa0059880 | Msa0646730 | -0.803548 | 3.307803e-49 | -8.615850e-47 |
| Msa0072710 | Msa0646730 | 0.822281 | 2.576329e-53 | -8.615850e-47 |
| Msa0079550 | Msa0646730 | 0.812496 | 4.117582e-51 | -8.615850e-47 |
| Msa0091340 | Msa0646730 | 0.801062 | 1.074988e-48 | -8.615850e-47 |
| Msa0093830 | Msa0646730 | 0.803698 | 3.079591e-49 | -8.615850e-47 |
| Msa0094240 | Msa0646730 | 0.823299 | 1.492270e-53 | -8.615850e-47 |
| Msa0094670 | Msa0646730 | 0.802531 | 5.367168e-49 | -8.615850e-47 |
| Msa0096510 | Msa0646730 | 0.801740 | 7.808736e-49 | -8.615850e-47 |
| Msa0097730 | Msa0646730 | 0.801803 | 7.577188e-49 | -8.615850e-47 |
| Msa0116950 | Msa0646730 | 0.830937 | 2.216441e-55 | -8.615850e-47 |
| Msa0118250 | Msa0646730 | 0.806024 | 1.005542e-49 | -8.615850e-47 |
| Msa0606140 | Msa0646730 | 0.810212 | 1.289525e-50 | -8.615850e-47 |
| Msa0607440 | Msa0646730 | 0.810336 | 1.212772e-50 | -8.615850e-47 |
| Msa0612730 | Msa0646730 | 0.812869 | 3.412529e-51 | -8.615850e-47 |
| Msa0615530 | Msa0646730 | 0.803981 | 2.689574e-49 | -8.615850e-47 |
| Msa0618490 | Msa0646730 | 0.817050 | 4.032302e-52 | -8.615850e-47 |
| Msa0621870 | Msa0646730 | 0.811541 | 6.649373e-51 | -8.615850e-47 |
| Msa0626900 | Msa0646730 | 0.807012 | 6.221804e-50 | -8.615850e-47 |
| Msa0646730 | Msa0657300 | 0.818374 | 2.026706e-52 | -8.615850e-47 |
| Msa0646730 | Msa0663580 | 0.807034 | 6.154458e-50 | -8.615850e-47 |
| Msa0646730 | Msa0665040 | 0.802696 | 4.963735e-49 | -8.615850e-47 |
| Msa0646730 | Msa0677110 | 0.825099 | 5.637785e-54 | -8.615850e-47 |
| Msa0646730 | Msa0686300 | 0.895883 | 6.271903e-76 | -8.615850e-47 |
| Msa0646730 | Msa0688760 | 0.817815 | 2.710868e-52 | -8.615850e-47 |
| Msa0646730 | Msa0689980 | 0.802459 | 5.555151e-49 | -8.615850e-47 |
| Msa0646730 | Msa0697230 | 0.804473 | 2.124130e-49 | -8.615850e-47 |
| Msa0646730 | Msa0698580 | 0.813852 | 2.075150e-51 | -8.615850e-47 |
| Msa0646730 | Msa0705610 | 0.802518 | 5.401418e-49 | -8.615850e-47 |
| Msa0646730 | Msa0712580 | 0.800956 | 1.130129e-48 | -8.615850e-47 |
| Msa0646730 | Msa0716600 | -0.815950 | 7.107362e-52 | -8.615850e-47 |
| Msa0646730 | Msa0726640 | 0.817822 | 2.701445e-52 | -8.615850e-47 |
| Msa0646730 | Msa0744280 | 0.812942 | 3.289095e-51 | -8.615850e-47 |
| Msa0646730 | Msa0744690 | 0.836814 | 7.506384e-57 | -8.615850e-47 |
| Msa0646730 | Msa0748470 | 0.819702 | 1.010856e-52 | -8.615850e-47 |
| Msa0646730 | Msa0756440 | 0.805228 | 1.476858e-49 | -8.615850e-47 |
| Msa0646730 | Msa0758000 | -0.805282 | 1.438914e-49 | -8.615850e-47 |
| Msa0646730 | Msa0761930 | 0.809319 | 2.007232e-50 | -8.615850e-47 |
| Msa0646730 | Msa0766540 | 0.821032 | 5.008268e-53 | -8.615850e-47 |
| Msa0646730 | Msa0781030 | 0.823969 | 1.040407e-53 | -8.615850e-47 |
| Msa0646730 | Msa0791430 | 0.848940 | 4.449622e-60 | -8.615850e-47 |
| Msa0646730 | Msa0807950 | 0.809309 | 2.016687e-50 | -8.615850e-47 |
| Msa0646730 | Msa0829570 | 0.805553 | 1.262735e-49 | -8.615850e-47 |
| Msa0646730 | Msa0833910 | 0.812154 | 4.889646e-51 | -8.615850e-47 |
| Msa0646730 | Msa0834160 | 0.810781 | 9.719282e-51 | -8.615850e-47 |
| Msa0646730 | Msa0835550 | 0.800449 | 1.433869e-48 | -8.615850e-47 |
| Msa0646730 | Msa0846070 | 0.825079 | 5.699284e-54 | -8.615850e-47 |
| Msa0646730 | Msa0861400 | 0.818153 | 2.273951e-52 | -8.615850e-47 |
| Msa0646730 | Msa0872110 | 0.800213 | 1.601374e-48 | -8.615850e-47 |
| Msa0646730 | Msa0876030 | 0.852707 | 3.868614e-61 | -8.615850e-47 |
| Msa0646730 | Msa0880200 | 0.823275 | 1.511786e-53 | -8.615850e-47 |
| Msa0646730 | Msa0883640 | -0.801732 | 7.835973e-49 | -8.615850e-47 |
| Msa0646730 | Msa0895860 | 0.810895 | 9.181827e-51 | -8.615850e-47 |
| Msa0646730 | Msa0899140 | 0.801607 | 8.312551e-49 | -8.615850e-47 |
| Msa0646730 | Msa0899900 | 0.802211 | 6.248131e-49 | -8.615850e-47 |
| Msa0646730 | Msa0901140 | 0.800887 | 1.167177e-48 | -8.615850e-47 |
| Msa0646730 | Msa0907520 | 0.802295 | 6.002482e-49 | -8.615850e-47 |
| Msa0646730 | Msa0910830 | -0.818637 | 1.766501e-52 | -8.615850e-47 |
| Msa0646730 | Msa0911710 | 0.808726 | 2.688025e-50 | -8.615850e-47 |
| Msa0646730 | Msa0930150 | 0.817358 | 3.437982e-52 | -8.615850e-47 |
| Msa0646730 | Msa0932040 | 0.855075 | 8.043346e-62 | -8.615850e-47 |
| Msa0646730 | Msa0937270 | 0.825492 | 4.551789e-54 | -8.615850e-47 |
| Msa0646730 | Msa0938370 | 0.805283 | 1.438254e-49 | -8.615850e-47 |
| Msa0646730 | Msa0960090 | -0.800924 | 1.146901e-48 | -8.615850e-47 |
| Msa0646730 | Msa0968450 | 0.803257 | 3.800196e-49 | -8.615850e-47 |
| Msa0646730 | Msa0970120 | 0.820027 | 8.518496e-53 | -8.615850e-47 |
| Msa0646730 | Msa0970160 | 0.849914 | 2.381866e-60 | -8.615850e-47 |
| Msa0646730 | Msa0985700 | -0.802032 | 6.799299e-49 | -8.615850e-47 |
| Msa0646730 | Msa1014700 | 0.811964 | 5.379534e-51 | -8.615850e-47 |
| Msa0646730 | Msa1015020 | 0.802083 | 6.637788e-49 | -8.615850e-47 |
| Msa0646730 | Msa1021600 | 0.804566 | 2.031215e-49 | -8.615850e-47 |
| Msa0646730 | Msa1022590 | 0.832817 | 7.613007e-56 | -8.615850e-47 |
| Msa0646730 | Msa1022660 | 0.803795 | 2.940104e-49 | -8.615850e-47 |
| Msa0646730 | Msa1026610 | 0.819917 | 9.030041e-53 | -8.615850e-47 |
| Msa0646730 | Msa1026880 | 0.802563 | 5.287484e-49 | -8.615850e-47 |
| Msa0646730 | Msa1028720 | 0.805041 | 1.616870e-49 | -8.615850e-47 |
| Msa0646730 | Msa1028780 | 0.822356 | 2.475524e-53 | -8.615850e-47 |
| Msa0646730 | Msa1029010 | 0.801888 | 7.280830e-49 | -8.615850e-47 |
| Msa0646730 | Msa1029430 | 0.815368 | 9.582299e-52 | -8.615850e-47 |
| Msa0646730 | Msa1030440 | 0.801860 | 7.377402e-49 | -8.615850e-47 |
| Msa0646730 | Msa1031650 | 0.800710 | 1.268536e-48 | -8.615850e-47 |
| Msa0646730 | Msa1038230 | 0.800354 | 1.498952e-48 | -8.615850e-47 |
| Msa0646730 | Msa1039860 | 0.803402 | 3.545960e-49 | -8.615850e-47 |
| Msa0646730 | Msa1040030 | 0.817794 | 2.740844e-52 | -8.615850e-47 |
| Msa0646730 | Msa1061130 | 0.839500 | 1.526727e-57 | -8.615850e-47 |
| Msa0646730 | Msa1061420 | 0.811522 | 6.712999e-51 | -8.615850e-47 |
| Msa0646730 | Msa1068290 | 0.828507 | 8.651886e-55 | -8.615850e-47 |
| Msa0646730 | Msa1073140 | 0.824019 | 1.012361e-53 | -8.615850e-47 |
| Msa0646730 | Msa1081850 | 0.818665 | 1.740813e-52 | -8.615850e-47 |
| Msa0646730 | Msa1084210 | 0.811690 | 6.170730e-51 | -8.615850e-47 |
| Msa0646730 | Msa1088690 | 0.821842 | 3.255637e-53 | -8.615850e-47 |
| Msa0646730 | Msa1096280 | 0.815086 | 1.106875e-51 | -8.615850e-47 |
| Msa0646730 | Msa1098470 | 0.801090 | 1.060951e-48 | -8.615850e-47 |
| Msa0646730 | Msa1105680 | 0.803007 | 4.281621e-49 | -8.615850e-47 |
| Msa0646730 | Msa1109890 | -0.817247 | 3.640114e-52 | -8.615850e-47 |
| Msa0646730 | Msa1116010 | 0.813165 | 2.938840e-51 | -8.615850e-47 |
| Msa0646730 | Msa1118870 | 0.811211 | 7.841786e-51 | -8.615850e-47 |
| Msa0646730 | Msa1118890 | 0.807043 | 6.129603e-50 | -8.615850e-47 |
| Msa0646730 | Msa1126910 | 0.809360 | 1.966354e-50 | -8.615850e-47 |
| Msa0646730 | Msa1126980 | 0.804790 | 1.823763e-49 | -8.615850e-47 |
| Msa0646730 | Msa1130070 | 0.821766 | 3.390852e-53 | -8.615850e-47 |
| Msa0646730 | Msa1150170 | 0.809934 | 1.480634e-50 | -8.615850e-47 |
| Msa0646730 | Msa1151970 | 0.807612 | 4.643421e-50 | -8.615850e-47 |
| Msa0646730 | Msa1154130 | 0.823116 | 1.646918e-53 | -8.615850e-47 |
| Msa0646730 | Msa1162470 | 0.826289 | 2.944333e-54 | -8.615850e-47 |
| Msa0646730 | Msa1166020 | 0.802980 | 4.336318e-49 | -8.615850e-47 |
| Msa0646730 | Msa1181730 | 0.806808 | 6.871958e-50 | -8.615850e-47 |
| Msa0646730 | Msa1190320 | 0.807413 | 5.116042e-50 | -8.615850e-47 |
| Msa0646730 | Msa1203840 | 0.807883 | 4.066507e-50 | -8.615850e-47 |
| Msa0646730 | Msa1203860 | 0.803358 | 3.620853e-49 | -8.615850e-47 |
| Msa0646730 | Msa1205520 | 0.825104 | 5.621963e-54 | -8.615850e-47 |
| Msa0646730 | Msa1209650 | 0.800007 | 1.763738e-48 | -8.615850e-47 |
| Msa0646730 | Msa1223600 | 0.824639 | 7.237130e-54 | -8.615850e-47 |
| Msa0646730 | Msa1224310 | 0.835360 | 1.755828e-56 | -8.615850e-47 |
| Msa0646730 | Msa1229880 | 0.837583 | 4.772710e-57 | -8.615850e-47 |
| Msa0646730 | Msa1233770 | 0.814368 | 1.596747e-51 | -8.615850e-47 |
| Msa0646730 | Msa1235880 | 0.802328 | 5.910462e-49 | -8.615850e-47 |
| Msa0646730 | Msa1244180 | 0.820535 | 6.517743e-53 | -8.615850e-47 |
| Msa0646730 | Msa1252220 | 0.804123 | 2.512970e-49 | -8.615850e-47 |
| Msa0646730 | Msa1258770 | 0.824466 | 7.948148e-54 | -8.615850e-47 |
| Msa0646730 | Msa1265990 | 0.814047 | 1.879876e-51 | -8.615850e-47 |
| Msa0646730 | Msa1267800 | 0.809628 | 1.722908e-50 | -8.615850e-47 |
| Msa0646730 | Msa1269370 | 0.812426 | 4.266181e-51 | -8.615850e-47 |
| Msa0646730 | Msa1276080 | 0.815579 | 8.600571e-52 | -8.615850e-47 |
| Msa0646730 | Msa1279240 | 0.817061 | 4.008017e-52 | -8.615850e-47 |
| Msa0646730 | Msa1280020 | 0.800693 | 1.278496e-48 | -8.615850e-47 |
| Msa0646730 | Msa1298740 | 0.835845 | 1.323343e-56 | -8.615850e-47 |
| Msa0646730 | Msa1310620 | 0.829222 | 5.808781e-55 | -8.615850e-47 |
| Msa0646730 | Msa1327690 | 0.818337 | 2.065801e-52 | -8.615850e-47 |
| Msa0646730 | Msa1330280 | 0.808197 | 3.485411e-50 | -8.615850e-47 |
| Msa0646730 | Msa1330910 | 0.807701 | 4.445882e-50 | -8.615850e-47 |
| Msa0646730 | Msa1338600 | 0.811421 | 7.062128e-51 | -8.615850e-47 |
| Msa0646730 | Msa1342080 | 0.807650 | 4.557856e-50 | -8.615850e-47 |
| Msa0646730 | Msa1344940 | 0.824195 | 9.204797e-54 | -8.615850e-47 |
| Msa0646730 | Msa1345470 | 0.816623 | 5.027153e-52 | -8.615850e-47 |
| Msa0646730 | Msa1349490 | 0.815956 | 7.086520e-52 | -8.615850e-47 |
| Msa0646730 | Msa1350350 | 0.850739 | 1.397288e-60 | -8.615850e-47 |
| Msa0646730 | Msa1353270 | 0.836778 | 7.663429e-57 | -8.615850e-47 |
| Msa0646730 | Msa1356500 | 0.851981 | 6.226089e-61 | -8.615850e-47 |
| Msa0646730 | Msa1356680 | 0.826833 | 2.183178e-54 | -8.615850e-47 |
| Msa0646730 | Msa1356730 | 0.811214 | 7.830889e-51 | -8.615850e-47 |
| Msa0646730 | Msa1361090 | 0.837567 | 4.815709e-57 | -8.615850e-47 |
| Msa0646730 | Msa1364650 | 0.807644 | 4.569552e-50 | -8.615850e-47 |
| Msa0646730 | Msa1368800 | 0.823544 | 1.307911e-53 | -8.615850e-47 |
| Msa0646730 | Msa1369900 | 0.811251 | 7.686330e-51 | -8.615850e-47 |
| Msa0646730 | Msa1372570 | 0.837210 | 5.943932e-57 | -8.615850e-47 |
| Msa0646730 | Msa1373340 | 0.807164 | 5.778810e-50 | -8.615850e-47 |
| Msa0646730 | Msa1374610 | 0.803124 | 4.048353e-49 | -8.615850e-47 |
| Msa0646730 | Msa1376230 | 0.811851 | 5.692622e-51 | -8.615850e-47 |
| Msa0646730 | Msa1378840 | 0.850859 | 1.293145e-60 | -8.615850e-47 |
| Msa0646730 | Msa1386020 | 0.814101 | 1.829150e-51 | -8.615850e-47 |
| Msa0646730 | Msa1388070 | 0.809785 | 1.594092e-50 | -8.615850e-47 |
| Msa0646730 | Msa1393550 | 0.801010 | 1.101595e-48 | -8.615850e-47 |
| Msa0646730 | Msa1396310 | 0.802266 | 6.088004e-49 | -8.615850e-47 |
| Msa0646730 | Msa1403900 | 0.816313 | 5.897917e-52 | -8.615850e-47 |
| Msa0646730 | Msa1418010 | 0.835851 | 1.319178e-56 | -8.615850e-47 |
| Msa0646730 | Msa1420130 | 0.811764 | 5.947177e-51 | -8.615850e-47 |
| Msa0646730 | Msa1420600 | 0.813174 | 2.924878e-51 | -8.615850e-47 |
| Msa0646730 | Msa1423660 | -0.805099 | 1.572003e-49 | -8.615850e-47 |
| Msa0646730 | Msa1425540 | 0.824040 | 1.001307e-53 | -8.615850e-47 |
| Msa0646730 | Msa1426310 | 0.801180 | 1.017078e-48 | -8.615850e-47 |
| Msa0646730 | Msa1427020 | 0.817739 | 2.820844e-52 | -8.615850e-47 |
| Msa0646730 | Msa1428990 | 0.825984 | 3.478890e-54 | -8.615850e-47 |
| Msa0646730 | Msa1431240 | 0.804103 | 2.536741e-49 | -8.615850e-47 |
| Msa0646730 | Msa1432350 | 0.816732 | 4.751851e-52 | -8.615850e-47 |
| Msa0646730 | Msa1435820 | 0.823709 | 1.196929e-53 | -8.615850e-47 |
| Msa0646730 | Msa1438780 | 0.813619 | 2.335009e-51 | -8.615850e-47 |
| Msa0646730 | Msa1449510 | 0.821689 | 3.532639e-53 | -8.615850e-47 |
| Msa0646730 | Msa1450420 | 0.811341 | 7.349765e-51 | -8.615850e-47 |
| Msa0646730 | Msa1451780 | 0.823134 | 1.631521e-53 | -8.615850e-47 |
| Msa0646730 | Msa1463500 | 0.802970 | 4.356273e-49 | -8.615850e-47 |
| Msa0646730 | Msa1465380 | 0.839618 | 1.422757e-57 | -8.615850e-47 |
| Msa0646730 | Msa1465950 | 0.809022 | 2.323887e-50 | -8.615850e-47 |
| Msa0646730 | Msa1466170 | 0.813434 | 2.565056e-51 | -8.615850e-47 |
| Msa0120980 | Msa0646730 | 0.816236 | 6.137935e-52 | -8.615850e-47 |
| Msa0121080 | Msa0646730 | 0.816990 | 4.158074e-52 | -8.615850e-47 |
| Msa0124070 | Msa0646730 | 0.813185 | 2.908966e-51 | -8.615850e-47 |
| Msa0126760 | Msa0646730 | 0.835759 | 1.391687e-56 | -8.615850e-47 |
| Msa0128840 | Msa0646730 | 0.803160 | 3.979484e-49 | -8.615850e-47 |
| Msa0132920 | Msa0646730 | 0.822784 | 1.967926e-53 | -8.615850e-47 |
| Msa0134550 | Msa0646730 | 0.811347 | 7.327094e-51 | -8.615850e-47 |
| Msa0135330 | Msa0646730 | -0.806018 | 1.008515e-49 | -8.615850e-47 |
| Msa0147960 | Msa0646730 | 0.801392 | 9.199343e-49 | -8.615850e-47 |
| Msa0155540 | Msa0646730 | 0.806065 | 9.855141e-50 | -8.615850e-47 |
| Msa0160080 | Msa0646730 | 0.804099 | 2.541629e-49 | -8.615850e-47 |
| Msa0160470 | Msa0646730 | 0.815056 | 1.124204e-51 | -8.615850e-47 |
| Msa0164580 | Msa0646730 | 0.829061 | 6.355406e-55 | -8.615850e-47 |
| Msa0170550 | Msa0646730 | 0.823359 | 1.445300e-53 | -8.615850e-47 |
| Msa0170690 | Msa0646730 | 0.813574 | 2.389676e-51 | -8.615850e-47 |
| Msa0177570 | Msa0646730 | 0.832753 | 7.895254e-56 | -8.615850e-47 |
| Msa0182310 | Msa0646730 | -0.804953 | 1.686552e-49 | -8.615850e-47 |
| Msa0186380 | Msa0646730 | 0.816217 | 6.196393e-52 | -8.615850e-47 |
| Msa0190400 | Msa0646730 | 0.809862 | 1.534338e-50 | -8.615850e-47 |
| Msa0191470 | Msa0646730 | -0.807187 | 5.713814e-50 | -8.615850e-47 |
| Msa0195670 | Msa0646730 | 0.800298 | 1.538688e-48 | -8.615850e-47 |
| Msa0196620 | Msa0646730 | 0.800537 | 1.375699e-48 | -8.615850e-47 |
| Msa0197600 | Msa0646730 | 0.808063 | 3.723693e-50 | -8.615850e-47 |
| Msa0203330 | Msa0646730 | 0.821184 | 4.621682e-53 | -8.615850e-47 |
| Msa0206600 | Msa0646730 | 0.809230 | 2.097142e-50 | -8.615850e-47 |
| Msa0213020 | Msa0646730 | 0.810280 | 1.246865e-50 | -8.615850e-47 |
| Msa0224980 | Msa0646730 | 0.807556 | 4.770971e-50 | -8.615850e-47 |
| Msa0225030 | Msa0646730 | 0.806832 | 6.792310e-50 | -8.615850e-47 |
| Msa0227960 | Msa0646730 | 0.815543 | 8.761861e-52 | -8.615850e-47 |
| Msa0227970 | Msa0646730 | 0.807885 | 4.061981e-50 | -8.615850e-47 |
| Msa0237440 | Msa0646730 | 0.818344 | 2.058962e-52 | -8.615850e-47 |
| Msa0365350 | Msa0646730 | 0.818377 | 2.023051e-52 | -8.615850e-47 |
| Msa0368620 | Msa0646730 | -0.801516 | 8.680058e-49 | -8.615850e-47 |
| Msa0370180 | Msa0646730 | 0.816105 | 6.563981e-52 | -8.615850e-47 |
| Msa0370510 | Msa0646730 | 0.811282 | 7.568853e-51 | -8.615850e-47 |
| Msa0372250 | Msa0646730 | 0.824305 | 8.672711e-54 | -8.615850e-47 |
| Msa0373640 | Msa0646730 | 0.824550 | 7.598240e-54 | -8.615850e-47 |
| Msa0375570 | Msa0646730 | 0.806788 | 6.937575e-50 | -8.615850e-47 |
| Msa0376900 | Msa0646730 | 0.813383 | 2.631667e-51 | -8.615850e-47 |
| Msa0379090 | Msa0646730 | 0.825441 | 4.680352e-54 | -8.615850e-47 |
| Msa0381990 | Msa0646730 | 0.801840 | 7.445401e-49 | -8.615850e-47 |
| Msa0383570 | Msa0646730 | 0.804250 | 2.364062e-49 | -8.615850e-47 |
| Msa0385870 | Msa0646730 | 0.813428 | 2.572308e-51 | -8.615850e-47 |
| Msa0386390 | Msa0646730 | 0.837041 | 6.566553e-57 | -8.615850e-47 |
| Msa0390350 | Msa0646730 | 0.805293 | 1.431883e-49 | -8.615850e-47 |
| Msa0394330 | Msa0646730 | 0.803165 | 3.969885e-49 | -8.615850e-47 |
| Msa0397000 | Msa0646730 | 0.800409 | 1.460887e-48 | -8.615850e-47 |
| Msa0400900 | Msa0646730 | 0.804310 | 2.297358e-49 | -8.615850e-47 |
| Msa0403670 | Msa0646730 | 0.808776 | 2.622171e-50 | -8.615850e-47 |
| Msa0405040 | Msa0646730 | 0.804650 | 1.950939e-49 | -8.615850e-47 |
| Msa0416040 | Msa0646730 | -0.815905 | 7.273928e-52 | -8.615850e-47 |
| Msa0423590 | Msa0646730 | 0.803997 | 2.668358e-49 | -8.615850e-47 |
| Msa0424220 | Msa0646730 | 0.807563 | 4.755671e-50 | -8.615850e-47 |
| Msa0424930 | Msa0646730 | 0.803051 | 4.192015e-49 | -8.615850e-47 |
| Msa0431310 | Msa0646730 | 0.825078 | 5.703603e-54 | -8.615850e-47 |
| Msa0432390 | Msa0646730 | 0.802106 | 6.565516e-49 | -8.615850e-47 |
| Msa0449030 | Msa0646730 | 0.806399 | 8.384149e-50 | -8.615850e-47 |
| Msa0459920 | Msa0646730 | 0.821322 | 4.293570e-53 | -8.615850e-47 |
| Msa0471890 | Msa0646730 | 0.802767 | 4.798030e-49 | -8.615850e-47 |
| Msa0475080 | Msa0646730 | 0.822525 | 2.260844e-53 | -8.615850e-47 |
| Msa0475740 | Msa0646730 | 0.818025 | 2.430554e-52 | -8.615850e-47 |
| Msa0478730 | Msa0646730 | 0.802461 | 5.550180e-49 | -8.615850e-47 |
| Msa0479790 | Msa0646730 | 0.837434 | 5.209733e-57 | -8.615850e-47 |
| Msa0480260 | Msa0646730 | -0.800843 | 1.191483e-48 | -8.615850e-47 |
| Msa0481580 | Msa0646730 | 0.804613 | 1.985879e-49 | -8.615850e-47 |
| Msa0239980 | Msa0646730 | 0.858732 | 6.731340e-63 | -8.615850e-47 |
| Msa0240290 | Msa0646730 | 0.808656 | 2.782573e-50 | -8.615850e-47 |
| Msa0267130 | Msa0646730 | 0.822605 | 2.166233e-53 | -8.615850e-47 |
| Msa0269430 | Msa0646730 | 0.801357 | 9.354908e-49 | -8.615850e-47 |
| Msa0272420 | Msa0646730 | 0.815618 | 8.431414e-52 | -8.615850e-47 |
| Msa0282860 | Msa0646730 | 0.816663 | 4.923526e-52 | -8.615850e-47 |
| Msa0283680 | Msa0646730 | 0.822066 | 2.889707e-53 | -8.615850e-47 |
| Msa0285510 | Msa0646730 | 0.802795 | 4.734475e-49 | -8.615850e-47 |
| Msa0305810 | Msa0646730 | 0.819885 | 9.181477e-53 | -8.615850e-47 |
| Msa0312570 | Msa0646730 | 0.821400 | 4.119148e-53 | -8.615850e-47 |
| Msa0312780 | Msa0646730 | 0.828115 | 1.075388e-54 | -8.615850e-47 |
| Msa0314980 | Msa0646730 | 0.814638 | 1.391538e-51 | -8.615850e-47 |
| Msa0317630 | Msa0646730 | 0.818485 | 1.912790e-52 | -8.615850e-47 |
| Msa0321230 | Msa0646730 | 0.832381 | 9.766768e-56 | -8.615850e-47 |
| Msa0335860 | Msa0646730 | 0.804976 | 1.667587e-49 | -8.615850e-47 |
| Msa0341710 | Msa0646730 | 0.809320 | 2.005397e-50 | -8.615850e-47 |
| Msa0355590 | Msa0646730 | 0.805618 | 1.223754e-49 | -8.615850e-47 |
| Msa0358720 | Msa0646730 | 0.818687 | 1.720868e-52 | -8.615850e-47 |
| Msa0484890 | Msa0646730 | 0.843262 | 1.561103e-58 | -8.615850e-47 |
| Msa0497060 | Msa0646730 | 0.826645 | 2.421747e-54 | -8.615850e-47 |
| Msa0498320 | Msa0646730 | 0.835574 | 1.550219e-56 | -8.615850e-47 |
| Msa0500490 | Msa0646730 | 0.800357 | 1.497140e-48 | -8.615850e-47 |
| Msa0508770 | Msa0646730 | 0.827768 | 1.303822e-54 | -8.615850e-47 |
| Msa0515400 | Msa0646730 | 0.808864 | 2.512071e-50 | -8.615850e-47 |
| Msa0515830 | Msa0646730 | 0.816814 | 4.555231e-52 | -8.615850e-47 |
| Msa0523400 | Msa0646730 | 0.812267 | 4.620676e-51 | -8.615850e-47 |
| Msa0525800 | Msa0646730 | 0.856306 | 3.518106e-62 | -8.615850e-47 |
| Msa0527210 | Msa0646730 | 0.802844 | 4.625915e-49 | -8.615850e-47 |
| Msa0528170 | Msa0646730 | 0.813422 | 2.580289e-51 | -8.615850e-47 |
| Msa0532880 | Msa0646730 | 0.812070 | 5.100889e-51 | -8.615850e-47 |
| Msa0533140 | Msa0646730 | 0.849986 | 2.273875e-60 | -8.615850e-47 |
| Msa0540520 | Msa0646730 | 0.853691 | 2.021318e-61 | -8.615850e-47 |
| Msa0552660 | Msa0646730 | 0.802593 | 5.211862e-49 | -8.615850e-47 |
| Msa0565930 | Msa0646730 | 0.811231 | 7.763486e-51 | -8.615850e-47 |
| Msa0568810 | Msa0646730 | 0.829375 | 5.331018e-55 | -8.615850e-47 |
| Msa0569930 | Msa0646730 | 0.822547 | 2.234151e-53 | -8.615850e-47 |
| Msa0581190 | Msa0646730 | 0.804661 | 1.940951e-49 | -8.615850e-47 |
| Msa0587060 | Msa0646730 | 0.801049 | 1.081562e-48 | -8.615850e-47 |
| Msa0589540 | Msa0646730 | 0.842677 | 2.234816e-58 | -8.615850e-47 |
| Msa0595780 | Msa0646730 | 0.827438 | 1.564394e-54 | -8.615850e-47 |
| Msa0598610 | Msa0646730 | 0.807490 | 4.927879e-50 | -8.615850e-47 |
| Msa0598680 | Msa0646730 | 0.815733 | 7.947448e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646730 | MtrunA17_Chr4g0035121 | 96.440 | 309 | 11 | 0 | 1 | 309 | 1 | 309 | 0.0 | 612 |
| Msa0646730 | MtrunA17_Chr3g0141691 | 50.329 | 304 | 149 | 1 | 3 | 306 | 4 | 305 | 2.07e-109 | 320 |
| Msa0646730 | MtrunA17_Chr3g0141681 | 50.489 | 307 | 148 | 2 | 2 | 306 | 3 | 307 | 4.30e-107 | 314 |
| Msa0646730 | MtrunA17_Chr5g0404471 | 49.673 | 306 | 152 | 1 | 2 | 307 | 4 | 307 | 9.10e-106 | 311 |
| Msa0646730 | MtrunA17_Chr3g0144701 | 48.845 | 303 | 153 | 1 | 4 | 306 | 9 | 309 | 1.87e-104 | 307 |
| Msa0646730 | MtrunA17_Chr4g0035131 | 45.338 | 311 | 164 | 3 | 1 | 309 | 42 | 348 | 1.95e-94 | 284 |
| Msa0646730 | MtrunA17_Chr4g0035111 | 41.584 | 303 | 175 | 1 | 4 | 306 | 7 | 307 | 2.59e-86 | 262 |
| Msa0646730 | MtrunA17_Chr5g0404481 | 40.317 | 315 | 174 | 4 | 3 | 306 | 4 | 315 | 2.15e-81 | 249 |
| Msa0646730 | MtrunA17_Chr5g0404511 | 40.317 | 315 | 174 | 4 | 3 | 306 | 4 | 315 | 2.17e-81 | 249 |
| Msa0646730 | MtrunA17_Chr5g0409651 | 40.575 | 313 | 178 | 3 | 1 | 308 | 1 | 310 | 1.22e-75 | 234 |
| Msa0646730 | MtrunA17_Chr5g0409641 | 40.645 | 310 | 176 | 3 | 1 | 305 | 1 | 307 | 3.46e-75 | 233 |
| Msa0646730 | MtrunA17_Chr8g0369391 | 38.854 | 314 | 185 | 3 | 1 | 309 | 1 | 312 | 3.97e-72 | 225 |
| Msa0646730 | MtrunA17_Chr3g0078901 | 34.416 | 308 | 194 | 5 | 3 | 309 | 5 | 305 | 6.90e-59 | 191 |
| Msa0646730 | MtrunA17_Chr3g0078831 | 34.091 | 308 | 195 | 5 | 3 | 309 | 5 | 305 | 6.77e-57 | 186 |
| Msa0646730 | MtrunA17_Chr1g0198771 | 32.686 | 309 | 203 | 3 | 1 | 307 | 11 | 316 | 5.00e-56 | 185 |
| Msa0646730 | MtrunA17_Chr3g0078941 | 33.175 | 211 | 134 | 4 | 99 | 309 | 8 | 211 | 3.13e-36 | 129 |
| Msa0646730 | MtrunA17_Chr3g0078951 | 37.383 | 107 | 59 | 4 | 2 | 105 | 4 | 105 | 1.79e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646730 | AT4G34540.1 | 64.286 | 308 | 103 | 2 | 2 | 309 | 6 | 306 | 7.92e-147 | 415 |
| Msa0646730 | AT1G75290.1 | 49.673 | 306 | 150 | 2 | 2 | 305 | 4 | 307 | 2.75e-107 | 315 |
| Msa0646730 | AT1G75290.2 | 49.673 | 306 | 150 | 2 | 2 | 305 | 31 | 334 | 1.26e-106 | 315 |
| Msa0646730 | AT4G39230.1 | 48.534 | 307 | 156 | 1 | 3 | 309 | 4 | 308 | 2.19e-106 | 312 |
| Msa0646730 | AT1G75280.1 | 50.327 | 306 | 147 | 3 | 2 | 305 | 4 | 306 | 2.22e-106 | 313 |
| Msa0646730 | AT1G75300.1 | 45.625 | 320 | 153 | 4 | 2 | 305 | 4 | 318 | 3.57e-96 | 287 |
| Msa0646730 | AT1G19540.1 | 46.906 | 307 | 157 | 3 | 4 | 306 | 3 | 307 | 8.93e-94 | 280 |
| Msa0646730 | AT1G19540.2 | 48.828 | 256 | 125 | 3 | 4 | 255 | 3 | 256 | 3.48e-77 | 236 |
| Msa0646730 | AT1G32100.1 | 36.392 | 316 | 187 | 4 | 2 | 309 | 8 | 317 | 1.01e-63 | 204 |
| Msa0646730 | AT4G13660.1 | 35.897 | 312 | 186 | 4 | 2 | 305 | 8 | 313 | 1.41e-60 | 196 |
| Msa0646730 | AT4G13660.2 | 35.897 | 312 | 186 | 4 | 2 | 305 | 8 | 313 | 1.41e-60 | 196 |
Find 88 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAAAGGCATTGAAGTTTA+TGG | 0.188596 | 4_3:+52590133 | None:intergenic |
| TTGCAATATAGTAATATAAT+AGG | 0.221482 | 4_3:-52587020 | Msa0646730:three_prime_UTR |
| GAGATATGGGAAACTAAAAT+AGG | 0.244528 | 4_3:-52588279 | Msa0646730:CDS |
| TAATACTTGATTCTGCTAAA+TGG | 0.246479 | 4_3:+52590217 | None:intergenic |
| ACCTGCCAAACATTAATCTA+TGG | 0.246485 | 4_3:+52590322 | None:intergenic |
| AATTAACAACGCTTGTTCTT+TGG | 0.246796 | 4_3:-52587077 | Msa0646730:three_prime_UTR |
| AGGGACAAAGTCACTATATT+TGG | 0.279239 | 4_3:-52588522 | Msa0646730:CDS |
| AGGTTCATCCCATCTGAATT+TGG | 0.279876 | 4_3:-52588726 | Msa0646730:CDS |
| AAGCACGTTTGCACATTCTT+AGG | 0.294342 | 4_3:+52587108 | None:intergenic |
| TTCAAAGAACAAACATTTCC+TGG | 0.311587 | 4_3:+52588312 | None:intergenic |
| TATATATTCTGCTTTCATAA+AGG | 0.325754 | 4_3:-52587343 | Msa0646730:CDS |
| ATATATTCTGCTTTCATAAA+GGG | 0.332310 | 4_3:-52587342 | Msa0646730:CDS |
| GGAAAGGCATTGAAGTTTAT+GGG | 0.335646 | 4_3:+52590134 | None:intergenic |
| TTGTAGACTTTGATTTGTTT+AGG | 0.345490 | 4_3:-52587216 | Msa0646730:exon |
| TTGCAGGAGATGAAAGTATA+TGG | 0.349566 | 4_3:+52588603 | None:intergenic |
| TTGAAGTTTATGGGATTTGA+TGG | 0.363989 | 4_3:+52590143 | None:intergenic |
| TGAATGAGCTGGTTGAGATA+TGG | 0.375861 | 4_3:-52588293 | Msa0646730:CDS |
| TTTAATATTGAGTCATCATA+TGG | 0.387179 | 4_3:-52587306 | Msa0646730:CDS |
| TTGCTGGTGTATGGTGTTTG+TGG | 0.388829 | 4_3:+52586762 | None:intergenic |
| GATTTGTTTAGGAATATGTT+TGG | 0.403304 | 4_3:-52587205 | Msa0646730:three_prime_UTR |
| TTGATGAACGTTGGATTGAA+TGG | 0.410849 | 4_3:-52590286 | Msa0646730:exon |
| TACAACAAAAGCTACTCATC+AGG | 0.411527 | 4_3:-52589914 | Msa0646730:CDS |
| TGCAATATAGTAATATAATA+GGG | 0.420739 | 4_3:-52587019 | Msa0646730:three_prime_UTR |
| GAATGAGCTGGTTGAGATAT+GGG | 0.421530 | 4_3:-52588292 | Msa0646730:CDS |
| CTTCCTTCTCTTGTCCAACC+AGG | 0.425019 | 4_3:-52588561 | Msa0646730:CDS |
| CTTCAATGCCTTTCCCATGC+TGG | 0.428488 | 4_3:-52590126 | Msa0646730:CDS |
| CAAACAACTTGGTTCTATCA+AGG | 0.437457 | 4_3:-52589886 | Msa0646730:intron |
| AATATAAAATAAACAGTGTC+AGG | 0.439379 | 4_3:+52586902 | None:intergenic |
| CCATCCCATAGATTAATGTT+TGG | 0.446339 | 4_3:-52590327 | Msa0646730:five_prime_UTR |
| CCCATAGATTAATGTTTGGC+AGG | 0.460309 | 4_3:-52590323 | Msa0646730:five_prime_UTR |
| CAGGATTAAAAGCTCCTCCT+AGG | 0.463730 | 4_3:-52588542 | Msa0646730:CDS |
| AAAGCATCTCAAAGTTCGTT+GGG | 0.466321 | 4_3:+52587367 | None:intergenic |
| AATTGTAGGTGTATTTATGC+AGG | 0.470701 | 4_3:-52588412 | Msa0646730:intron |
| CTCTAACAAGAGCAAATGTT+GGG | 0.483286 | 4_3:+52590184 | None:intergenic |
| ATTGGTGCAACGGGAAGTCT+TGG | 0.488303 | 4_3:-52590243 | Msa0646730:CDS |
| AGATATGGGAAACTAAAATA+GGG | 0.489971 | 4_3:-52588278 | Msa0646730:CDS |
| TTAATGTTTGGCAGGTAGCT+AGG | 0.492990 | 4_3:-52590315 | Msa0646730:five_prime_UTR |
| AAAAGCATCTCAAAGTTCGT+TGG | 0.496084 | 4_3:+52587366 | None:intergenic |
| TCTCTAACAAGAGCAAATGT+TGG | 0.501646 | 4_3:+52590183 | None:intergenic |
| TTTGGTGACGGCAATACAAA+AGG | 0.514372 | 4_3:-52588504 | Msa0646730:intron |
| GAGAAAATCATACTTTGAGA+AGG | 0.521010 | 4_3:+52590097 | None:intergenic |
| CCAAACATTAATCTATGGGA+TGG | 0.525921 | 4_3:+52590327 | None:intergenic |
| ACAACGCTTGTTCTTTGGCA+AGG | 0.534396 | 4_3:-52587072 | Msa0646730:three_prime_UTR |
| AATCCTGGTTGGACAAGAGA+AGG | 0.534523 | 4_3:+52588558 | None:intergenic |
| CAAAACTTTATTCAACGTGC+GGG | 0.536330 | 4_3:+52588347 | None:intergenic |
| CCTGCCAAACATTAATCTAT+GGG | 0.537918 | 4_3:+52590323 | None:intergenic |
| AATTGAAATTAGGCAACTTG+TGG | 0.541470 | 4_3:-52588640 | Msa0646730:CDS |
| GTTACATCATTACATTACAT+AGG | 0.541535 | 4_3:-52590380 | Msa0646730:five_prime_UTR |
| AAGTTCACATACTTTAGCCT+TGG | 0.542851 | 4_3:+52588692 | None:intergenic |
| ATCAGGGTTATCAAACAACT+TGG | 0.542961 | 4_3:-52589897 | Msa0646730:CDS |
| TGAAGTTTATGGGATTTGAT+GGG | 0.544984 | 4_3:+52590144 | None:intergenic |
| TGTTTGTTCTTTGAATGAGC+TGG | 0.551475 | 4_3:-52588304 | Msa0646730:CDS |
| GGATCTGAGCCAAATTCAGA+TGG | 0.556972 | 4_3:+52588717 | None:intergenic |
| GGTAGAGGAAATGAAATTGT+TGG | 0.557605 | 4_3:+52586838 | None:intergenic |
| GGCTAAAGTATGTGAACTTG+AGG | 0.561289 | 4_3:-52588688 | Msa0646730:CDS |
| GCTTGTTCTTTGGCAAGGAG+TGG | 0.562355 | 4_3:-52587067 | Msa0646730:three_prime_UTR |
| GAGTCATCATATGGTGTGAA+TGG | 0.563850 | 4_3:-52587297 | Msa0646730:CDS |
| GGGTAACTCCAGCATGGGAA+AGG | 0.565218 | 4_3:+52590118 | None:intergenic |
| TCACATACTTTAGCCTTGGT+AGG | 0.568317 | 4_3:+52588696 | None:intergenic |
| AGGATTAAAAGCTCCTCCTA+GGG | 0.569921 | 4_3:-52588541 | Msa0646730:CDS |
| TATGTAATGTAATGATGTAA+CGG | 0.573101 | 4_3:+52590382 | None:intergenic |
| GAGCTGCTTGAGAAAATCAA+AGG | 0.590625 | 4_3:-52588222 | Msa0646730:intron |
| AGGAAATGAAATTGTTGGTG+TGG | 0.592290 | 4_3:+52586843 | None:intergenic |
| CAAACATTAATCTATGGGAT+GGG | 0.593363 | 4_3:+52590328 | None:intergenic |
| ATATAATAGGGAATTCTGCT+AGG | 0.596697 | 4_3:-52587007 | Msa0646730:three_prime_UTR |
| AAAGTATGTGAACTTGAGGA+TGG | 0.599062 | 4_3:-52588684 | Msa0646730:CDS |
| GAGAAGGGTAACTCCAGCAT+GGG | 0.599164 | 4_3:+52590113 | None:intergenic |
| GTGTACATTCGCATGAGAGA+AGG | 0.600246 | 4_3:-52590420 | None:intergenic |
| AGAAAATCATACTTTGAGAA+GGG | 0.600453 | 4_3:+52590098 | None:intergenic |
| AGGCAACTTGTGGAAGCTGA+AGG | 0.602341 | 4_3:-52588630 | Msa0646730:CDS |
| TGAGAAGGGTAACTCCAGCA+TGG | 0.605275 | 4_3:+52590112 | None:intergenic |
| ACAAAACTTTATTCAACGTG+CGG | 0.614674 | 4_3:+52588346 | None:intergenic |
| AATATAGTGACTTTGTCCCT+AGG | 0.615843 | 4_3:+52588525 | None:intergenic |
| ACAACAAAAGCTACTCATCA+GGG | 0.618980 | 4_3:-52589913 | Msa0646730:CDS |
| AGATGAAGCAAGCCTTGTTG+AGG | 0.626473 | 4_3:-52589988 | Msa0646730:CDS |
| AAATATAAAGATAATAACAT+CGG | 0.630368 | 4_3:+52587141 | None:intergenic |
| AGGTTGTTGTTGATGAACGT+TGG | 0.630790 | 4_3:-52590295 | Msa0646730:five_prime_UTR |
| ATTGTGGAATATCTCAGCTG+TGG | 0.632032 | 4_3:+52587261 | None:intergenic |
| CTAACTTCACAGCCTCAACA+AGG | 0.643328 | 4_3:+52589976 | None:intergenic |
| AAAGTCACTATATTTGGTGA+CGG | 0.648569 | 4_3:-52588516 | Msa0646730:CDS |
| ATAGTGACTTTGTCCCTAGG+AGG | 0.649958 | 4_3:+52588528 | None:intergenic |
| GATCTGAGCCAAATTCAGAT+GGG | 0.661245 | 4_3:+52588718 | None:intergenic |
| AAATAGGGAAGAAACTTGAG+AGG | 0.666892 | 4_3:-52588263 | Msa0646730:CDS |
| AAAACTTTATTCAACGTGCG+GGG | 0.672201 | 4_3:+52588348 | None:intergenic |
| GTGTCAGGAAACAAAGACAG+TGG | 0.674358 | 4_3:+52586917 | None:intergenic |
| TGCTGCTTTCACTATCAATG+CGG | 0.675047 | 4_3:-52588379 | Msa0646730:CDS |
| AAAGAACAAACATTTCCTGG+AGG | 0.691831 | 4_3:+52588315 | None:intergenic |
| ATTTGGCTCAGATCCTACCA+AGG | 0.716779 | 4_3:-52588709 | Msa0646730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATCATATTTTTATAGTTT+AGG | + | chr4_3:52588056-52588075 | None:intergenic | 10.0% |
| !!! | TTATCATATTTTTATAGTTT+AGG | + | chr4_3:52588056-52588075 | None:intergenic | 10.0% |
| !! | TCAATTTATAGAAATATAAT+AGG | + | chr4_3:52588249-52588268 | None:intergenic | 10.0% |
| !!! | TTAATAAGAATTGAATTTTT+AGG | - | chr4_3:52589300-52589319 | Msa0646730:intron | 10.0% |
| !! | AAATATAAAGATAATAACAT+CGG | + | chr4_3:52590051-52590070 | None:intergenic | 10.0% |
| !!! | AAAAGCAAGATTTTAATAAT+TGG | - | chr4_3:52586928-52586947 | Msa0646730:three_prime_UTR | 15.0% |
| !! | ACTAGAATATTAAGTAATTT+AGG | - | chr4_3:52588187-52588206 | Msa0646730:intron | 15.0% |
| !! | CTAGAATATTAAGTAATTTA+GGG | - | chr4_3:52588188-52588207 | Msa0646730:intron | 15.0% |
| !! | TATAGTATATACTATCAATT+TGG | + | chr4_3:52588289-52588308 | None:intergenic | 15.0% |
| !!! | CTTTTGTTTATAATAAATTG+AGG | - | chr4_3:52588322-52588341 | Msa0646730:CDS | 15.0% |
| !! | TATCTATAAGCTTATATATA+AGG | - | chr4_3:52589581-52589600 | Msa0646730:intron | 15.0% |
| !! | ATCTATAAGCTTATATATAA+GGG | - | chr4_3:52589582-52589601 | Msa0646730:intron | 15.0% |
| !! | TTGCAATATAGTAATATAAT+AGG | - | chr4_3:52590169-52590188 | Msa0646730:CDS | 15.0% |
| !! | TGCAATATAGTAATATAATA+GGG | - | chr4_3:52590170-52590189 | Msa0646730:CDS | 15.0% |
| !!! | AAATATTGAGATTTTTAAAG+TGG | + | chr4_3:52590375-52590394 | None:intergenic | 15.0% |
| !! | TATGTAATGTAATGATGTAA+CGG | + | chr4_3:52586810-52586829 | None:intergenic | 20.0% |
| !!! | TCCAAATTTTTACTTTAGTT+CGG | - | chr4_3:52587514-52587533 | Msa0646730:intron | 20.0% |
| !! | AATAAAAAATTCAGCTCAAA+AGG | - | chr4_3:52587701-52587720 | Msa0646730:intron | 20.0% |
| !! | ATAAAAAATTCAGCTCAAAA+GGG | - | chr4_3:52587702-52587721 | Msa0646730:intron | 20.0% |
| !! | CTATAAAAATATGATAAGTC+AGG | - | chr4_3:52588059-52588078 | Msa0646730:intron | 20.0% |
| !! | CTATAAAAATATGATAAGTC+AGG | - | chr4_3:52588059-52588078 | Msa0646730:intron | 20.0% |
| !!! | ATTCTAGTTCTTATCTTTAA+AGG | + | chr4_3:52588175-52588194 | None:intergenic | 20.0% |
| !!! | ATTTGTTTGTTAACATTTGT+TGG | - | chr4_3:52588434-52588453 | Msa0646730:intron | 20.0% |
| !!! | AACAACTTTAGTTTTTAAGA+AGG | - | chr4_3:52589095-52589114 | Msa0646730:intron | 20.0% |
| !! | TTCAATAAAAATAAGGGAAA+AGG | + | chr4_3:52589337-52589356 | None:intergenic | 20.0% |
| !!! | TTTTGAAAATATTGAATTGC+AGG | + | chr4_3:52589536-52589555 | None:intergenic | 20.0% |
| !! | ATATGTTCAGAATAATTCAT+AGG | + | chr4_3:52589675-52589694 | None:intergenic | 20.0% |
| !! | TATATATTCTGCTTTCATAA+AGG | - | chr4_3:52589846-52589865 | Msa0646730:intron | 20.0% |
| !! | ATATATTCTGCTTTCATAAA+GGG | - | chr4_3:52589847-52589866 | Msa0646730:intron | 20.0% |
| !! | TTTAATATTGAGTCATCATA+TGG | - | chr4_3:52589883-52589902 | Msa0646730:intron | 20.0% |
| !! | AATATAAAATAAACAGTGTC+AGG | + | chr4_3:52590290-52590309 | None:intergenic | 20.0% |
| ! | GTTACATCATTACATTACAT+AGG | - | chr4_3:52586809-52586828 | Msa0646730:three_prime_UTR | 25.0% |
| !!! | GATTTTAATAATTGGTGCAA+CGG | - | chr4_3:52586936-52586955 | Msa0646730:three_prime_UTR | 25.0% |
| !!! | ATTTTAATAATTGGTGCAAC+GGG | - | chr4_3:52586937-52586956 | Msa0646730:three_prime_UTR | 25.0% |
| ! | TAATACTTGATTCTGCTAAA+TGG | + | chr4_3:52586975-52586994 | None:intergenic | 25.0% |
| !! | AGAAAATCATACTTTGAGAA+GGG | + | chr4_3:52587094-52587113 | None:intergenic | 25.0% |
| !!! | TGGTTGATATTTTATGTACA+GGG | - | chr4_3:52587169-52587188 | Msa0646730:three_prime_UTR | 25.0% |
| ! | ATGAACTCTTCAAATTCTTA+TGG | - | chr4_3:52587348-52587367 | Msa0646730:CDS | 25.0% |
| !!! | ATATACTTTTTCAGCTAACA+AGG | + | chr4_3:52587413-52587432 | None:intergenic | 25.0% |
| ! | AAAATAACAAGTATCAGCTA+TGG | + | chr4_3:52587486-52587505 | None:intergenic | 25.0% |
| !!! | GCTGATACTTGTTATTTTTT+AGG | - | chr4_3:52587488-52587507 | Msa0646730:intron | 25.0% |
| !!! | CCAAATTTTTACTTTAGTTC+GGG | - | chr4_3:52587515-52587534 | Msa0646730:intron | 25.0% |
| ! | GTCATTGAAAAATATAAGCA+TGG | + | chr4_3:52587628-52587647 | None:intergenic | 25.0% |
| ! | ATATATGCGATATATCCTAA+TGG | + | chr4_3:52587978-52587997 | None:intergenic | 25.0% |
| !! | CTTATCTTTAAAGGAATTGA+TGG | + | chr4_3:52588166-52588185 | None:intergenic | 25.0% |
| ! | TAATTTAGGGACTAAGTTTA+TGG | - | chr4_3:52588201-52588220 | Msa0646730:intron | 25.0% |
| !! | TTATGGACTGAAAATAGTTT+AGG | - | chr4_3:52588218-52588237 | Msa0646730:intron | 25.0% |
| !! | TATGGACTGAAAATAGTTTA+GGG | - | chr4_3:52588219-52588238 | Msa0646730:intron | 25.0% |
| ! | TCTATAAATTGAAGAGTGAT+AGG | - | chr4_3:52588257-52588276 | Msa0646730:CDS | 25.0% |
| ! | GGATTATTAAATGTTCATGT+AGG | + | chr4_3:52588363-52588382 | None:intergenic | 25.0% |
| !! | TGTGATTTGTGTATTCAAAT+AGG | + | chr4_3:52588384-52588403 | None:intergenic | 25.0% |
| ! | ATGCACCAAAAATTGAAATT+AGG | - | chr4_3:52588539-52588558 | Msa0646730:CDS | 25.0% |
| !! | AGTTGCCTAATTTCAATTTT+TGG | + | chr4_3:52588547-52588566 | None:intergenic | 25.0% |
| !! | AATTTTCATGAAGAAATTGC+AGG | + | chr4_3:52588605-52588624 | None:intergenic | 25.0% |
| ! | AGATATGGGAAACTAAAATA+GGG | - | chr4_3:52588911-52588930 | Msa0646730:intron | 25.0% |
| !!! | AACTTTAGTTTTTAAGAAGG+CGG | - | chr4_3:52589098-52589117 | Msa0646730:intron | 25.0% |
| !!! | ATTTTTTAAGTGTCAAACCA+AGG | + | chr4_3:52589161-52589180 | None:intergenic | 25.0% |
| !!! | TTCCCTTATTTTTATTGAAC+TGG | - | chr4_3:52589338-52589357 | Msa0646730:intron | 25.0% |
| ! | TGCCAGTTCAATAAAAATAA+GGG | + | chr4_3:52589343-52589362 | None:intergenic | 25.0% |
| !!! | AAATTTTAAGTACCAATCCA+AGG | - | chr4_3:52589455-52589474 | Msa0646730:intron | 25.0% |
| ! | TTAAAAGGCAAATTATACAG+TGG | + | chr4_3:52589502-52589521 | None:intergenic | 25.0% |
| ! | TTAAATCAGAATGACTTTAC+AGG | + | chr4_3:52589619-52589638 | None:intergenic | 25.0% |
| !! | TTGGATTGATTTCTACATAA+TGG | + | chr4_3:52589646-52589665 | None:intergenic | 25.0% |
| !!! | AATAATTCATAGGCTTTGTT+TGG | + | chr4_3:52589665-52589684 | None:intergenic | 25.0% |
| ! | TTATCTGTTAAGACTTTAAG+AGG | - | chr4_3:52589706-52589725 | Msa0646730:intron | 25.0% |
| !!! | ACATACTGTCTGTATTTTTT+TGG | - | chr4_3:52589779-52589798 | Msa0646730:intron | 25.0% |
| !!! | CATACTGTCTGTATTTTTTT+GGG | - | chr4_3:52589780-52589799 | Msa0646730:intron | 25.0% |
| !!! | ATACTGTCTGTATTTTTTTG+GGG | - | chr4_3:52589781-52589800 | Msa0646730:intron | 25.0% |
| !!! | TTGTAGACTTTGATTTGTTT+AGG | - | chr4_3:52589973-52589992 | Msa0646730:CDS | 25.0% |
| !! | GATTTGTTTAGGAATATGTT+TGG | - | chr4_3:52589984-52590003 | Msa0646730:CDS | 25.0% |
| ! | AGATAATAACATCGGAAAAA+TGG | + | chr4_3:52590043-52590062 | None:intergenic | 25.0% |
| CAAACATTAATCTATGGGAT+GGG | + | chr4_3:52586864-52586883 | None:intergenic | 30.0% | |
| TGAAGTTTATGGGATTTGAT+GGG | + | chr4_3:52587048-52587067 | None:intergenic | 30.0% | |
| TTGAAGTTTATGGGATTTGA+TGG | + | chr4_3:52587049-52587068 | None:intergenic | 30.0% | |
| ! | GAGAAAATCATACTTTGAGA+AGG | + | chr4_3:52587095-52587114 | None:intergenic | 30.0% |
| !! | GTGGTTGATATTTTATGTAC+AGG | - | chr4_3:52587168-52587187 | Msa0646730:three_prime_UTR | 30.0% |
| ! | TAATGGACAACATATTCTAG+CGG | + | chr4_3:52587439-52587458 | None:intergenic | 30.0% |
| CCCGAACTAAAGTAAAAATT+TGG | + | chr4_3:52587518-52587537 | None:intergenic | 30.0% | |
| CTATACGAATGCTATATTGT+TGG | + | chr4_3:52587652-52587671 | None:intergenic | 30.0% | |
| GAAGATTAATCACTACCAAA+CGG | + | chr4_3:52587779-52587798 | None:intergenic | 30.0% | |
| AAACCATTACCACTTGTTTA+AGG | - | chr4_3:52587876-52587895 | Msa0646730:intron | 30.0% | |
| AGAGAAAGAACGATAGTTTA+AGG | + | chr4_3:52588024-52588043 | None:intergenic | 30.0% | |
| TATGATAAGTCAGGACTAAT+CGG | - | chr4_3:52588068-52588087 | Msa0646730:intron | 30.0% | |
| TATGATAAGTCAGGACTAAT+CGG | - | chr4_3:52588068-52588087 | Msa0646730:intron | 30.0% | |
| ! | TATAAACAAAAGCACACATG+TGG | + | chr4_3:52588314-52588333 | None:intergenic | 30.0% |
| AATTGAAATTAGGCAACTTG+TGG | - | chr4_3:52588549-52588568 | Msa0646730:CDS | 30.0% | |
| ! | AAAGTCACTATATTTGGTGA+CGG | - | chr4_3:52588673-52588692 | Msa0646730:CDS | 30.0% |
| !! | AAGCTCTGGAAAAATGAAAA+TGG | + | chr4_3:52588736-52588755 | None:intergenic | 30.0% |
| AATCATGAATAAGTAAGCTC+TGG | + | chr4_3:52588750-52588769 | None:intergenic | 30.0% | |
| AGAGCTTACTTATTCATGAT+TGG | - | chr4_3:52588749-52588768 | Msa0646730:intron | 30.0% | |
| !!! | CATGATTGGTTTTCAATTGT+AGG | - | chr4_3:52588763-52588782 | Msa0646730:intron | 30.0% |
| AATTGTAGGTGTATTTATGC+AGG | - | chr4_3:52588777-52588796 | Msa0646730:intron | 30.0% | |
| ACAAAACTTTATTCAACGTG+CGG | + | chr4_3:52588846-52588865 | None:intergenic | 30.0% | |
| TTCAAAGAACAAACATTTCC+TGG | + | chr4_3:52588880-52588899 | None:intergenic | 30.0% | |
| GAGATATGGGAAACTAAAAT+AGG | - | chr4_3:52588910-52588929 | Msa0646730:intron | 30.0% | |
| !! | TCATAATGCACTGATTCATA+AGG | + | chr4_3:52589009-52589028 | None:intergenic | 30.0% |
| AAACTTCTCAAAAGATTCTC+AGG | - | chr4_3:52589046-52589065 | Msa0646730:intron | 30.0% | |
| AACTTCTCAAAAGATTCTCA+GGG | - | chr4_3:52589047-52589066 | Msa0646730:intron | 30.0% | |
| !!! | ACTTTAGTTTTTAAGAAGGC+GGG | - | chr4_3:52589099-52589118 | Msa0646730:intron | 30.0% |
| CATTTAGAAGTAGAAGTTCA+TGG | - | chr4_3:52589212-52589231 | Msa0646730:intron | 30.0% | |
| GTGCCAGTTCAATAAAAATA+AGG | + | chr4_3:52589344-52589363 | None:intergenic | 30.0% | |
| CTTATAGAAGTAGAAACTCA+CGG | + | chr4_3:52589405-52589424 | None:intergenic | 30.0% | |
| CAGGAACAAAACTACTTAAA+AGG | + | chr4_3:52589517-52589536 | None:intergenic | 30.0% | |
| TTACTTAAGAGCTAAATGAG+AGG | + | chr4_3:52589560-52589579 | None:intergenic | 30.0% | |
| AATTAACAACGCTTGTTCTT+TGG | - | chr4_3:52590112-52590131 | Msa0646730:CDS | 30.0% | |
| ATATAATAGGGAATTCTGCT+AGG | - | chr4_3:52590182-52590201 | Msa0646730:CDS | 30.0% | |
| !!! | TGAGATTTTTAAAGTGGTAG+AGG | + | chr4_3:52590369-52590388 | None:intergenic | 30.0% |
| CCAAACATTAATCTATGGGA+TGG | + | chr4_3:52586865-52586884 | None:intergenic | 35.0% | |
| CCATCCCATAGATTAATGTT+TGG | - | chr4_3:52586862-52586881 | Msa0646730:three_prime_UTR | 35.0% | |
| CCTGCCAAACATTAATCTAT+GGG | + | chr4_3:52586869-52586888 | None:intergenic | 35.0% | |
| ACCTGCCAAACATTAATCTA+TGG | + | chr4_3:52586870-52586889 | None:intergenic | 35.0% | |
| TTGATGAACGTTGGATTGAA+TGG | - | chr4_3:52586903-52586922 | Msa0646730:three_prime_UTR | 35.0% | |
| CTCTAACAAGAGCAAATGTT+GGG | + | chr4_3:52587008-52587027 | None:intergenic | 35.0% | |
| TCTCTAACAAGAGCAAATGT+TGG | + | chr4_3:52587009-52587028 | None:intergenic | 35.0% | |
| !! | GGAAAGGCATTGAAGTTTAT+GGG | + | chr4_3:52587058-52587077 | None:intergenic | 35.0% |
| ! | TGAGTCTTATCTGATTCTTG+TGG | - | chr4_3:52587149-52587168 | Msa0646730:three_prime_UTR | 35.0% |
| TACAACAAAAGCTACTCATC+AGG | - | chr4_3:52587275-52587294 | Msa0646730:CDS | 35.0% | |
| ACAACAAAAGCTACTCATCA+GGG | - | chr4_3:52587276-52587295 | Msa0646730:CDS | 35.0% | |
| ATCAGGGTTATCAAACAACT+TGG | - | chr4_3:52587292-52587311 | Msa0646730:CDS | 35.0% | |
| !! | CAAACAACTTGGTTCTATCA+AGG | - | chr4_3:52587303-52587322 | Msa0646730:CDS | 35.0% |
| GCTAGAATATGTTGTCCATT+AGG | - | chr4_3:52587438-52587457 | Msa0646730:intron | 35.0% | |
| TAATCACTACCAAACGGTAT+CGG | + | chr4_3:52587773-52587792 | None:intergenic | 35.0% | |
| ATGTGTACCCAATAAGTACT+CGG | + | chr4_3:52587804-52587823 | None:intergenic | 35.0% | |
| GGAGAAAACTTTGTTGAGAT+TGG | + | chr4_3:52587837-52587856 | None:intergenic | 35.0% | |
| AGACCTTAAACAAGTGGTAA+TGG | + | chr4_3:52587882-52587901 | None:intergenic | 35.0% | |
| GAAAAGAGACCTTAAACAAG+TGG | + | chr4_3:52587888-52587907 | None:intergenic | 35.0% | |
| ! | CTTACATTTTCCCTTCCATT+AGG | - | chr4_3:52587960-52587979 | Msa0646730:intron | 35.0% |
| TGCGATATATCCTAATGGAA+GGG | + | chr4_3:52587973-52587992 | None:intergenic | 35.0% | |
| ATGCGATATATCCTAATGGA+AGG | + | chr4_3:52587974-52587993 | None:intergenic | 35.0% | |
| TAAATTGAAGAGTGATAGGC+AGG | - | chr4_3:52588261-52588280 | Msa0646730:CDS | 35.0% | |
| AAATTGAAGAGTGATAGGCA+GGG | - | chr4_3:52588262-52588281 | Msa0646730:CDS | 35.0% | |
| ! | TTCATGTAGGTTGAGTTTCA+AGG | + | chr4_3:52588350-52588369 | None:intergenic | 35.0% |
| ! | TTAACATTTGTTGGCTACAG+AGG | - | chr4_3:52588443-52588462 | Msa0646730:intron | 35.0% |
| AAGTTCACATACTTTAGCCT+TGG | + | chr4_3:52588500-52588519 | None:intergenic | 35.0% | |
| AAAGTATGTGAACTTGAGGA+TGG | - | chr4_3:52588505-52588524 | Msa0646730:CDS | 35.0% | |
| ! | TTGCAGGAGATGAAAGTATA+TGG | + | chr4_3:52588589-52588608 | None:intergenic | 35.0% |
| AATATAGTGACTTTGTCCCT+AGG | + | chr4_3:52588667-52588686 | None:intergenic | 35.0% | |
| AGGGACAAAGTCACTATATT+TGG | - | chr4_3:52588667-52588686 | Msa0646730:CDS | 35.0% | |
| AAAACTTTATTCAACGTGCG+GGG | + | chr4_3:52588844-52588863 | None:intergenic | 35.0% | |
| CAAAACTTTATTCAACGTGC+GGG | + | chr4_3:52588845-52588864 | None:intergenic | 35.0% | |
| AAAGAACAAACATTTCCTGG+AGG | + | chr4_3:52588877-52588896 | None:intergenic | 35.0% | |
| TGTTTGTTCTTTGAATGAGC+TGG | - | chr4_3:52588885-52588904 | Msa0646730:intron | 35.0% | |
| AAATAGGGAAGAAACTTGAG+AGG | - | chr4_3:52588926-52588945 | Msa0646730:intron | 35.0% | |
| ! | TCTGAAACTCTAACGATGTT+TGG | - | chr4_3:52589183-52589202 | Msa0646730:intron | 35.0% |
| !!! | CTTGTTTTTGTCAACTTGCA+CGG | + | chr4_3:52589274-52589293 | None:intergenic | 35.0% |
| CGTGAGTTTCTACTTCTATA+AGG | - | chr4_3:52589403-52589422 | Msa0646730:intron | 35.0% | |
| !! | TTTTAAGTACCAATCCAAGG+TGG | - | chr4_3:52589458-52589477 | Msa0646730:intron | 35.0% |
| !! | ATACAGTGGACTACTTTGAT+AGG | + | chr4_3:52589488-52589507 | None:intergenic | 35.0% |
| ! | TGTTAAGACTTTAAGAGGCA+TGG | - | chr4_3:52589711-52589730 | Msa0646730:intron | 35.0% |
| ! | AAAGCATCTCAAAGTTCGTT+GGG | + | chr4_3:52589825-52589844 | None:intergenic | 35.0% |
| !! | AAAAGCATCTCAAAGTTCGT+TGG | + | chr4_3:52589826-52589845 | None:intergenic | 35.0% |
| ! | TTCCACAATCAGCGAATTTT+TGG | - | chr4_3:52589942-52589961 | Msa0646730:CDS | 35.0% |
| TCGGAAAAATGGAATGTTCA+AGG | + | chr4_3:52590032-52590051 | None:intergenic | 35.0% | |
| AGGAAATGAAATTGTTGGTG+TGG | + | chr4_3:52590349-52590368 | None:intergenic | 35.0% | |
| GGTAGAGGAAATGAAATTGT+TGG | + | chr4_3:52590354-52590373 | None:intergenic | 35.0% | |
| CCCATAGATTAATGTTTGGC+AGG | - | chr4_3:52586866-52586885 | Msa0646730:three_prime_UTR | 40.0% | |
| TTAATGTTTGGCAGGTAGCT+AGG | - | chr4_3:52586874-52586893 | Msa0646730:three_prime_UTR | 40.0% | |
| ! | AGGTTGTTGTTGATGAACGT+TGG | - | chr4_3:52586894-52586913 | Msa0646730:three_prime_UTR | 40.0% |
| !! | GGGAAAGGCATTGAAGTTTA+TGG | + | chr4_3:52587059-52587078 | None:intergenic | 40.0% |
| GAGATAAAGGATCAGCCTAA+TGG | + | chr4_3:52587456-52587475 | None:intergenic | 40.0% | |
| GCTGATCCTTTATCTCTTGA+AGG | - | chr4_3:52587460-52587479 | Msa0646730:intron | 40.0% | |
| CTATGGCCTTCAAGAGATAA+AGG | + | chr4_3:52587469-52587488 | None:intergenic | 40.0% | |
| ! | ATGAAGTATCCGATACCGTT+TGG | - | chr4_3:52587761-52587780 | Msa0646730:intron | 40.0% |
| ATCTTCCACCGAGTACTTAT+TGG | - | chr4_3:52587793-52587812 | Msa0646730:intron | 40.0% | |
| TCTTCCACCGAGTACTTATT+GGG | - | chr4_3:52587794-52587813 | Msa0646730:intron | 40.0% | |
| AGGTTCATCCCATCTGAATT+TGG | - | chr4_3:52588463-52588482 | Msa0646730:intron | 40.0% | |
| GATCTGAGCCAAATTCAGAT+GGG | + | chr4_3:52588474-52588493 | None:intergenic | 40.0% | |
| !! | TCACATACTTTAGCCTTGGT+AGG | + | chr4_3:52588496-52588515 | None:intergenic | 40.0% |
| GGCTAAAGTATGTGAACTTG+AGG | - | chr4_3:52588501-52588520 | Msa0646730:intron | 40.0% | |
| AGGATTAAAAGCTCCTCCTA+GGG | - | chr4_3:52588648-52588667 | Msa0646730:CDS | 40.0% | |
| !! | TTTGGTGACGGCAATACAAA+AGG | - | chr4_3:52588685-52588704 | Msa0646730:CDS | 40.0% |
| !! | TGCTGCTTTCACTATCAATG+CGG | - | chr4_3:52588810-52588829 | Msa0646730:intron | 40.0% |
| TGAATGAGCTGGTTGAGATA+TGG | - | chr4_3:52588896-52588915 | Msa0646730:intron | 40.0% | |
| GAATGAGCTGGTTGAGATAT+GGG | - | chr4_3:52588897-52588916 | Msa0646730:intron | 40.0% | |
| GAGCTGCTTGAGAAAATCAA+AGG | - | chr4_3:52588967-52588986 | Msa0646730:intron | 40.0% | |
| !! | TGCACTGATTCATAAGGTAG+TGG | + | chr4_3:52589003-52589022 | None:intergenic | 40.0% |
| GGATCACCTTGATAGAAAGA+TGG | - | chr4_3:52589131-52589150 | Msa0646730:intron | 40.0% | |
| GGTGAACCATCTTTCTATCA+AGG | + | chr4_3:52589140-52589159 | None:intergenic | 40.0% | |
| GATAGAAAGATGGTTCACCT+TGG | - | chr4_3:52589141-52589160 | Msa0646730:intron | 40.0% | |
| CTATCTCAAAGGTAAAGACG+AGG | + | chr4_3:52589242-52589261 | None:intergenic | 40.0% | |
| GAGTCATCATATGGTGTGAA+TGG | - | chr4_3:52589892-52589911 | Msa0646730:CDS | 40.0% | |
| ATTGTGGAATATCTCAGCTG+TGG | + | chr4_3:52589931-52589950 | None:intergenic | 40.0% | |
| ! | GTCCAAAAATTCGCTGATTG+TGG | + | chr4_3:52589947-52589966 | None:intergenic | 40.0% |
| AAGCACGTTTGCACATTCTT+AGG | + | chr4_3:52590084-52590103 | None:intergenic | 40.0% | |
| !! | AGATGAAGCAAGCCTTGTTG+AGG | - | chr4_3:52587201-52587220 | Msa0646730:three_prime_UTR | 45.0% |
| CTAACTTCACAGCCTCAACA+AGG | + | chr4_3:52587216-52587235 | None:intergenic | 45.0% | |
| TGTACCCAATAAGTACTCGG+TGG | + | chr4_3:52587801-52587820 | None:intergenic | 45.0% | |
| !! | AGTGGTAATGGTTTGATCCC+CGG | + | chr4_3:52587870-52587889 | None:intergenic | 45.0% |
| TAACCTAACCAGCATGTGGT+TGG | + | chr4_3:52587918-52587937 | None:intergenic | 45.0% | |
| TGCATAACCTAACCAGCATG+TGG | + | chr4_3:52587922-52587941 | None:intergenic | 45.0% | |
| GGATCTGAGCCAAATTCAGA+TGG | + | chr4_3:52588475-52588494 | None:intergenic | 45.0% | |
| ! | ATTTGGCTCAGATCCTACCA+AGG | - | chr4_3:52588480-52588499 | Msa0646730:intron | 45.0% |
| AATCCTGGTTGGACAAGAGA+AGG | + | chr4_3:52588634-52588653 | None:intergenic | 45.0% | |
| ! | GAGGAGCTTTTAATCCTGGT+TGG | + | chr4_3:52588645-52588664 | None:intergenic | 45.0% |
| ! | CTAGGAGGAGCTTTTAATCC+TGG | + | chr4_3:52588649-52588668 | None:intergenic | 45.0% |
| CAGGATTAAAAGCTCCTCCT+AGG | - | chr4_3:52588647-52588666 | Msa0646730:CDS | 45.0% | |
| ATAGTGACTTTGTCCCTAGG+AGG | + | chr4_3:52588664-52588683 | None:intergenic | 45.0% | |
| ! | GTTTTGTACTTGAGACCTCC+AGG | - | chr4_3:52588859-52588878 | Msa0646730:intron | 45.0% |
| !! | TTTTAAGAAGGCGGGTTCTG+AGG | - | chr4_3:52589107-52589126 | Msa0646730:intron | 45.0% |
| GGATCACGACACTATCTCAA+AGG | + | chr4_3:52589253-52589272 | None:intergenic | 45.0% | |
| !! | AAGGCGACGTTTGTTGTCAT+TGG | - | chr4_3:52589422-52589441 | Msa0646730:intron | 45.0% |
| ATAGGTGATCCACCTTGGAT+TGG | + | chr4_3:52589470-52589489 | None:intergenic | 45.0% | |
| CTTTGATAGGTGATCCACCT+TGG | + | chr4_3:52589475-52589494 | None:intergenic | 45.0% | |
| ACAACGCTTGTTCTTTGGCA+AGG | - | chr4_3:52590117-52590136 | Msa0646730:CDS | 45.0% | |
| GTGTCAGGAAACAAAGACAG+TGG | + | chr4_3:52590275-52590294 | None:intergenic | 45.0% | |
| !! | TATTTATAACAATATATAAA+AGG | + | chr4_3:52587733-52587752 | None:intergenic | 5.0% |
| !! | ATATATTGTTATAAATATTA+TGG | - | chr4_3:52587736-52587755 | Msa0646730:intron | 5.0% |
| ATTGGTGCAACGGGAAGTCT+TGG | - | chr4_3:52586946-52586965 | Msa0646730:three_prime_UTR | 50.0% | |
| CTTCAATGCCTTTCCCATGC+TGG | - | chr4_3:52587063-52587082 | Msa0646730:three_prime_UTR | 50.0% | |
| GAGAAGGGTAACTCCAGCAT+GGG | + | chr4_3:52587079-52587098 | None:intergenic | 50.0% | |
| TGAGAAGGGTAACTCCAGCA+TGG | + | chr4_3:52587080-52587099 | None:intergenic | 50.0% | |
| ! | GTTTTCTCCATCGAGAGAGC+CGG | - | chr4_3:52587848-52587867 | Msa0646730:intron | 50.0% |
| ! | TTTTCTCCATCGAGAGAGCC+GGG | - | chr4_3:52587849-52587868 | Msa0646730:intron | 50.0% |
| CACTTGAACCAACCACATGC+TGG | - | chr4_3:52587907-52587926 | Msa0646730:intron | 50.0% | |
| ! | GAACCAACCACATGCTGGTT+AGG | - | chr4_3:52587912-52587931 | Msa0646730:intron | 50.0% |
| AGGCAACTTGTGGAAGCTGA+AGG | - | chr4_3:52588559-52588578 | Msa0646730:CDS | 50.0% | |
| CTTCCTTCTCTTGTCCAACC+AGG | - | chr4_3:52588628-52588647 | Msa0646730:CDS | 50.0% | |
| CACGGTGCTTCTCATTCTCA+CGG | + | chr4_3:52589387-52589406 | None:intergenic | 50.0% | |
| GCTTGTTCTTTGGCAAGGAG+TGG | - | chr4_3:52590122-52590141 | Msa0646730:CDS | 50.0% | |
| GGGTAACTCCAGCATGGGAA+AGG | + | chr4_3:52587074-52587093 | None:intergenic | 55.0% | |
| TTTCTCCATCGAGAGAGCCG+GGG | - | chr4_3:52587850-52587869 | Msa0646730:intron | 55.0% | |
| !! | TAAGAAGGCGGGTTCTGAGG+TGG | - | chr4_3:52589110-52589129 | Msa0646730:intron | 55.0% |
| TTGATCCCCGGCTCTCTCGA+TGG | + | chr4_3:52587858-52587877 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 52586777 | 52590434 | 52586777 | ID=Msa0646730;Name=Msa0646730 |
| chr4_3 | mRNA | 52586777 | 52590434 | 52586777 | ID=Msa0646730-mRNA-1;Parent=Msa0646730;Name=Msa0646730-mRNA-1;_AED=0.04;_eAED=0.04;_QI=145|1|1|1|1|1|5|456|309 |
| chr4_3 | exon | 52586777 | 52587399 | 52586777 | ID=Msa0646730-mRNA-1:exon:12941;Parent=Msa0646730-mRNA-1 |
| chr4_3 | exon | 52588223 | 52588426 | 52588223 | ID=Msa0646730-mRNA-1:exon:12940;Parent=Msa0646730-mRNA-1 |
| chr4_3 | exon | 52588505 | 52588748 | 52588505 | ID=Msa0646730-mRNA-1:exon:12939;Parent=Msa0646730-mRNA-1 |
| chr4_3 | exon | 52589887 | 52590021 | 52589887 | ID=Msa0646730-mRNA-1:exon:12938;Parent=Msa0646730-mRNA-1 |
| chr4_3 | exon | 52590110 | 52590434 | 52590110 | ID=Msa0646730-mRNA-1:exon:12937;Parent=Msa0646730-mRNA-1 |
| chr4_3 | five_prime_UTR | 52590290 | 52590434 | 52590290 | ID=Msa0646730-mRNA-1:five_prime_utr;Parent=Msa0646730-mRNA-1 |
| chr4_3 | CDS | 52590110 | 52590289 | 52590110 | ID=Msa0646730-mRNA-1:cds;Parent=Msa0646730-mRNA-1 |
| chr4_3 | CDS | 52589887 | 52590021 | 52589887 | ID=Msa0646730-mRNA-1:cds;Parent=Msa0646730-mRNA-1 |
| chr4_3 | CDS | 52588505 | 52588748 | 52588505 | ID=Msa0646730-mRNA-1:cds;Parent=Msa0646730-mRNA-1 |
| chr4_3 | CDS | 52588223 | 52588426 | 52588223 | ID=Msa0646730-mRNA-1:cds;Parent=Msa0646730-mRNA-1 |
| chr4_3 | CDS | 52587233 | 52587399 | 52587233 | ID=Msa0646730-mRNA-1:cds;Parent=Msa0646730-mRNA-1 |
| chr4_3 | three_prime_UTR | 52586777 | 52587232 | 52586777 | ID=Msa0646730-mRNA-1:three_prime_utr;Parent=Msa0646730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
