Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844200 | XP_024639447.1 | 57.895 | 114 | 35 | 1 | 262 | 375 | 201 | 301 | 8.75e-25 | 114 |
| Msa0844200 | XP_024639447.1 | 90.667 | 225 | 20 | 1 | 1 | 224 | 1 | 225 | 7.21e-136 | 400 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844200 | sp|Q6NQK9|CCB4_ARATH | 62.000 | 200 | 72 | 3 | 25 | 221 | 16 | 214 | 4.32e-76 | 240 |
| Msa0844200 | sp|Q6NQK9|CCB4_ARATH | 82.222 | 45 | 8 | 0 | 323 | 367 | 241 | 285 | 8.09e-17 | 83.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844200 | A0A396HRT9 | 57.895 | 114 | 35 | 1 | 262 | 375 | 201 | 301 | 4.18e-25 | 114 |
| Msa0844200 | A0A396HRT9 | 90.667 | 225 | 20 | 1 | 1 | 224 | 1 | 225 | 3.44e-136 | 400 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa0844200 | 0.800267 | 1.561452e-48 | -8.615850e-47 |
| Msa0001040 | Msa0844200 | 0.802409 | 5.687452e-49 | -8.615850e-47 |
| Msa0021240 | Msa0844200 | 0.832012 | 1.204995e-55 | -8.615850e-47 |
| Msa0021570 | Msa0844200 | 0.815034 | 1.136646e-51 | -8.615850e-47 |
| Msa0022230 | Msa0844200 | 0.814029 | 1.896750e-51 | -8.615850e-47 |
| Msa0024070 | Msa0844200 | 0.820724 | 5.894917e-53 | -8.615850e-47 |
| Msa0028410 | Msa0844200 | 0.835821 | 1.342632e-56 | -8.615850e-47 |
| Msa0028450 | Msa0844200 | 0.852390 | 4.763028e-61 | -8.615850e-47 |
| Msa0028900 | Msa0844200 | 0.844000 | 9.913335e-59 | -8.615850e-47 |
| Msa0028940 | Msa0844200 | 0.833368 | 5.551627e-56 | -8.615850e-47 |
| Msa0032990 | Msa0844200 | 0.833411 | 5.415660e-56 | -8.615850e-47 |
| Msa0044700 | Msa0844200 | 0.818640 | 1.763903e-52 | -8.615850e-47 |
| Msa0045530 | Msa0844200 | 0.816118 | 6.519340e-52 | -8.615850e-47 |
| Msa0046090 | Msa0844200 | 0.807866 | 4.100567e-50 | -8.615850e-47 |
| Msa0058140 | Msa0844200 | 0.855935 | 4.518437e-62 | -8.615850e-47 |
| Msa0065190 | Msa0844200 | 0.805881 | 1.077571e-49 | -8.615850e-47 |
| Msa0088670 | Msa0844200 | 0.813275 | 2.780055e-51 | -8.615850e-47 |
| Msa0092750 | Msa0844200 | 0.825050 | 5.791667e-54 | -8.615850e-47 |
| Msa0093830 | Msa0844200 | 0.806028 | 1.003513e-49 | -8.615850e-47 |
| Msa0094990 | Msa0844200 | 0.805794 | 1.123775e-49 | -8.615850e-47 |
| Msa0102290 | Msa0844200 | 0.807950 | 3.935457e-50 | -8.615850e-47 |
| Msa0113910 | Msa0844200 | 0.834431 | 3.008699e-56 | -8.615850e-47 |
| Msa0118250 | Msa0844200 | 0.841004 | 6.178193e-58 | -8.615850e-47 |
| Msa0118700 | Msa0844200 | 0.823031 | 1.724270e-53 | -8.615850e-47 |
| Msa0606180 | Msa0844200 | 0.801679 | 8.034760e-49 | -8.615850e-47 |
| Msa0616000 | Msa0844200 | 0.816619 | 5.037348e-52 | -8.615850e-47 |
| Msa0619170 | Msa0844200 | 0.803681 | 3.103885e-49 | -8.615850e-47 |
| Msa0621870 | Msa0844200 | 0.808900 | 2.466831e-50 | -8.615850e-47 |
| Msa0626900 | Msa0844200 | 0.820406 | 6.975017e-53 | -8.615850e-47 |
| Msa0632040 | Msa0844200 | 0.817762 | 2.786841e-52 | -8.615850e-47 |
| Msa0636840 | Msa0844200 | 0.825136 | 5.524241e-54 | -8.615850e-47 |
| Msa0648410 | Msa0844200 | 0.819986 | 8.706666e-53 | -8.615850e-47 |
| Msa0653090 | Msa0844200 | 0.851461 | 8.744023e-61 | -8.615850e-47 |
| Msa0655080 | Msa0844200 | 0.838556 | 2.680256e-57 | -8.615850e-47 |
| Msa0655150 | Msa0844200 | 0.827779 | 1.295788e-54 | -8.615850e-47 |
| Msa0660160 | Msa0844200 | 0.813300 | 2.744602e-51 | -8.615850e-47 |
| Msa0663540 | Msa0844200 | 0.832667 | 8.292351e-56 | -8.615850e-47 |
| Msa0663630 | Msa0844200 | 0.822411 | 2.403362e-53 | -8.615850e-47 |
| Msa0663650 | Msa0844200 | 0.801381 | 9.247574e-49 | -8.615850e-47 |
| Msa0666380 | Msa0844200 | 0.825927 | 3.588288e-54 | -8.615850e-47 |
| Msa0667680 | Msa0844200 | 0.815422 | 9.320293e-52 | -8.615850e-47 |
| Msa0669160 | Msa0844200 | 0.810737 | 9.934095e-51 | -8.615850e-47 |
| Msa0687650 | Msa0844200 | 0.814808 | 1.276100e-51 | -8.615850e-47 |
| Msa0687740 | Msa0844200 | 0.802230 | 6.190765e-49 | -8.615850e-47 |
| Msa0690920 | Msa0844200 | 0.825920 | 3.603579e-54 | -8.615850e-47 |
| Msa0695470 | Msa0844200 | 0.828230 | 1.009262e-54 | -8.615850e-47 |
| Msa0703620 | Msa0844200 | 0.817942 | 2.538502e-52 | -8.615850e-47 |
| Msa0705710 | Msa0844200 | 0.802012 | 6.863721e-49 | -8.615850e-47 |
| Msa0708450 | Msa0844200 | 0.852054 | 5.937017e-61 | -8.615850e-47 |
| Msa0711510 | Msa0844200 | 0.823699 | 1.203169e-53 | -8.615850e-47 |
| Msa0716670 | Msa0844200 | 0.815504 | 8.937436e-52 | -8.615850e-47 |
| Msa0720850 | Msa0844200 | 0.821629 | 3.647925e-53 | -8.615850e-47 |
| Msa0721650 | Msa0844200 | 0.826629 | 2.442827e-54 | -8.615850e-47 |
| Msa0729120 | Msa0844200 | 0.804306 | 2.301490e-49 | -8.615850e-47 |
| Msa0749160 | Msa0844200 | 0.832542 | 8.908296e-56 | -8.615850e-47 |
| Msa0749900 | Msa0844200 | 0.811754 | 5.975260e-51 | -8.615850e-47 |
| Msa0751640 | Msa0844200 | 0.809214 | 2.113403e-50 | -8.615850e-47 |
| Msa0752290 | Msa0844200 | 0.806263 | 8.953268e-50 | -8.615850e-47 |
| Msa0757090 | Msa0844200 | 0.807792 | 4.250463e-50 | -8.615850e-47 |
| Msa0762390 | Msa0844200 | 0.823882 | 1.090407e-53 | -8.615850e-47 |
| Msa0762470 | Msa0844200 | 0.829940 | 3.886085e-55 | -8.615850e-47 |
| Msa0772400 | Msa0844200 | 0.818168 | 2.256727e-52 | -8.615850e-47 |
| Msa0772530 | Msa0844200 | 0.812320 | 4.499045e-51 | -8.615850e-47 |
| Msa0793590 | Msa0844200 | 0.824438 | 8.071080e-54 | -8.615850e-47 |
| Msa0794300 | Msa0844200 | 0.823459 | 1.369669e-53 | -8.615850e-47 |
| Msa0803220 | Msa0844200 | 0.819096 | 1.389581e-52 | -8.615850e-47 |
| Msa0803930 | Msa0844200 | 0.867391 | 1.417067e-65 | -8.615850e-47 |
| Msa0807170 | Msa0844200 | 0.818656 | 1.748879e-52 | -8.615850e-47 |
| Msa0807950 | Msa0844200 | 0.801175 | 1.019311e-48 | -8.615850e-47 |
| Msa0811710 | Msa0844200 | 0.821946 | 3.081435e-53 | -8.615850e-47 |
| Msa0829970 | Msa0844200 | 0.807800 | 4.233815e-50 | -8.615850e-47 |
| Msa0831710 | Msa0844200 | 0.819673 | 1.026602e-52 | -8.615850e-47 |
| Msa0833980 | Msa0844200 | 0.822154 | 2.757088e-53 | -8.615850e-47 |
| Msa0837040 | Msa0844200 | 0.815791 | 7.715085e-52 | -8.615850e-47 |
| Msa0840630 | Msa0844200 | 0.812640 | 3.829567e-51 | -8.615850e-47 |
| Msa0841980 | Msa0844200 | 0.808797 | 2.595543e-50 | -8.615850e-47 |
| Msa0124070 | Msa0844200 | 0.838400 | 2.941318e-57 | -8.615850e-47 |
| Msa0124460 | Msa0844200 | 0.817729 | 2.835209e-52 | -8.615850e-47 |
| Msa0127110 | Msa0844200 | 0.843319 | 1.507202e-58 | -8.615850e-47 |
| Msa0128840 | Msa0844200 | 0.803291 | 3.739594e-49 | -8.615850e-47 |
| Msa0136040 | Msa0844200 | 0.803381 | 3.582669e-49 | -8.615850e-47 |
| Msa0138340 | Msa0844200 | 0.818568 | 1.831300e-52 | -8.615850e-47 |
| Msa0145590 | Msa0844200 | 0.813237 | 2.833672e-51 | -8.615850e-47 |
| Msa0147960 | Msa0844200 | 0.817447 | 3.281698e-52 | -8.615850e-47 |
| Msa0155540 | Msa0844200 | 0.806058 | 9.891377e-50 | -8.615850e-47 |
| Msa0163170 | Msa0844200 | 0.863068 | 3.240053e-64 | -8.615850e-47 |
| Msa0168950 | Msa0844200 | 0.839329 | 1.691088e-57 | -8.615850e-47 |
| Msa0170730 | Msa0844200 | 0.813014 | 3.171950e-51 | -8.615850e-47 |
| Msa0172110 | Msa0844200 | 0.802221 | 6.216683e-49 | -8.615850e-47 |
| Msa0172310 | Msa0844200 | 0.810578 | 1.074929e-50 | -8.615850e-47 |
| Msa0180540 | Msa0844200 | 0.822181 | 2.717130e-53 | -8.615850e-47 |
| Msa0195850 | Msa0844200 | 0.805497 | 1.297155e-49 | -8.615850e-47 |
| Msa0197600 | Msa0844200 | 0.817612 | 3.012331e-52 | -8.615850e-47 |
| Msa0201910 | Msa0844200 | 0.801455 | 8.933270e-49 | -8.615850e-47 |
| Msa0216900 | Msa0844200 | 0.810646 | 1.039254e-50 | -8.615850e-47 |
| Msa0219550 | Msa0844200 | 0.821703 | 3.506437e-53 | -8.615850e-47 |
| Msa0231180 | Msa0844200 | 0.811753 | 5.979032e-51 | -8.615850e-47 |
| Msa0366120 | Msa0844200 | 0.812102 | 5.020087e-51 | -8.615850e-47 |
| Msa0370690 | Msa0844200 | 0.840918 | 6.507755e-58 | -8.615850e-47 |
| Msa0371050 | Msa0844200 | 0.805405 | 1.356030e-49 | -8.615850e-47 |
| Msa0376760 | Msa0844200 | 0.800301 | 1.536992e-48 | -8.615850e-47 |
| Msa0385400 | Msa0844200 | 0.801714 | 7.904055e-49 | -8.615850e-47 |
| Msa0386390 | Msa0844200 | 0.807686 | 4.478490e-50 | -8.615850e-47 |
| Msa0388000 | Msa0844200 | 0.839503 | 1.524009e-57 | -8.615850e-47 |
| Msa0390350 | Msa0844200 | 0.810537 | 1.097508e-50 | -8.615850e-47 |
| Msa0404330 | Msa0844200 | 0.818921 | 1.522983e-52 | -8.615850e-47 |
| Msa0404360 | Msa0844200 | 0.804893 | 1.736033e-49 | -8.615850e-47 |
| Msa0404440 | Msa0844200 | 0.804671 | 1.931322e-49 | -8.615850e-47 |
| Msa0405040 | Msa0844200 | 0.801012 | 1.100287e-48 | -8.615850e-47 |
| Msa0429550 | Msa0844200 | 0.809922 | 1.489184e-50 | -8.615850e-47 |
| Msa0431310 | Msa0844200 | 0.811298 | 7.507457e-51 | -8.615850e-47 |
| Msa0436310 | Msa0844200 | 0.808070 | 3.709188e-50 | -8.615850e-47 |
| Msa0439120 | Msa0844200 | 0.803830 | 2.890144e-49 | -8.615850e-47 |
| Msa0443250 | Msa0844200 | 0.810611 | 1.057690e-50 | -8.615850e-47 |
| Msa0456940 | Msa0844200 | 0.816974 | 4.193768e-52 | -8.615850e-47 |
| Msa0463140 | Msa0844200 | 0.831374 | 1.730560e-55 | -8.615850e-47 |
| Msa0471700 | Msa0844200 | 0.801038 | 1.087239e-48 | -8.615850e-47 |
| Msa0474290 | Msa0844200 | 0.824034 | 1.004139e-53 | -8.615850e-47 |
| Msa0475080 | Msa0844200 | 0.825341 | 4.941766e-54 | -8.615850e-47 |
| Msa0476820 | Msa0844200 | 0.810230 | 1.277822e-50 | -8.615850e-47 |
| Msa0479790 | Msa0844200 | 0.806876 | 6.648021e-50 | -8.615850e-47 |
| Msa0246470 | Msa0844200 | 0.837299 | 5.642304e-57 | -8.615850e-47 |
| Msa0249670 | Msa0844200 | 0.804836 | 1.783737e-49 | -8.615850e-47 |
| Msa0269660 | Msa0844200 | 0.816722 | 4.776730e-52 | -8.615850e-47 |
| Msa0269790 | Msa0844200 | 0.804017 | 2.643381e-49 | -8.615850e-47 |
| Msa0275260 | Msa0844200 | 0.821862 | 3.222182e-53 | -8.615850e-47 |
| Msa0281310 | Msa0844200 | 0.826478 | 2.653820e-54 | -8.615850e-47 |
| Msa0282880 | Msa0844200 | 0.800209 | 1.604535e-48 | -8.615850e-47 |
| Msa0284980 | Msa0844200 | 0.816646 | 4.966350e-52 | -8.615850e-47 |
| Msa0296100 | Msa0844200 | 0.805483 | 1.306221e-49 | -8.615850e-47 |
| Msa0297860 | Msa0844200 | 0.833018 | 6.785438e-56 | -8.615850e-47 |
| Msa0298820 | Msa0844200 | 0.803598 | 3.229495e-49 | -8.615850e-47 |
| Msa0304070 | Msa0844200 | 0.837107 | 6.317144e-57 | -8.615850e-47 |
| Msa0305810 | Msa0844200 | 0.807797 | 4.241454e-50 | -8.615850e-47 |
| Msa0307750 | Msa0844200 | 0.800427 | 1.448858e-48 | -8.615850e-47 |
| Msa0313550 | Msa0844200 | 0.800729 | 1.257186e-48 | -8.615850e-47 |
| Msa0314620 | Msa0844200 | 0.802035 | 6.790551e-49 | -8.615850e-47 |
| Msa0315760 | Msa0844200 | 0.807751 | 4.338339e-50 | -8.615850e-47 |
| Msa0316330 | Msa0844200 | 0.808760 | 2.642947e-50 | -8.615850e-47 |
| Msa0317630 | Msa0844200 | 0.806133 | 9.537759e-50 | -8.615850e-47 |
| Msa0321100 | Msa0844200 | 0.814591 | 1.425235e-51 | -8.615850e-47 |
| Msa0323790 | Msa0844200 | 0.803146 | 4.006247e-49 | -8.615850e-47 |
| Msa0329050 | Msa0844200 | 0.821257 | 4.444525e-53 | -8.615850e-47 |
| Msa0334480 | Msa0844200 | 0.810826 | 9.500078e-51 | -8.615850e-47 |
| Msa0341710 | Msa0844200 | 0.812377 | 4.370673e-51 | -8.615850e-47 |
| Msa0347600 | Msa0844200 | 0.831483 | 1.627077e-55 | -8.615850e-47 |
| Msa0349450 | Msa0844200 | 0.809555 | 1.785577e-50 | -8.615850e-47 |
| Msa0358750 | Msa0844200 | 0.802795 | 4.736204e-49 | -8.615850e-47 |
| Msa0360200 | Msa0844200 | 0.800627 | 1.318895e-48 | -8.615850e-47 |
| Msa0361500 | Msa0844200 | 0.810921 | 9.064581e-51 | -8.615850e-47 |
| Msa0501920 | Msa0844200 | 0.805772 | 1.135675e-49 | -8.615850e-47 |
| Msa0508620 | Msa0844200 | 0.815833 | 7.550486e-52 | -8.615850e-47 |
| Msa0508660 | Msa0844200 | 0.812481 | 4.148382e-51 | -8.615850e-47 |
| Msa0510410 | Msa0844200 | 0.842318 | 2.782499e-58 | -8.615850e-47 |
| Msa0512430 | Msa0844200 | 0.803377 | 3.588764e-49 | -8.615850e-47 |
| Msa0515420 | Msa0844200 | 0.801939 | 7.105966e-49 | -8.615850e-47 |
| Msa0518720 | Msa0844200 | 0.831541 | 1.574330e-55 | -8.615850e-47 |
| Msa0521190 | Msa0844200 | 0.801719 | 7.885504e-49 | -8.615850e-47 |
| Msa0527210 | Msa0844200 | 0.817782 | 2.757810e-52 | -8.615850e-47 |
| Msa0527420 | Msa0844200 | 0.852923 | 3.356184e-61 | -8.615850e-47 |
| Msa0530250 | Msa0844200 | 0.815549 | 8.734416e-52 | -8.615850e-47 |
| Msa0538100 | Msa0844200 | 0.809713 | 1.651663e-50 | -8.615850e-47 |
| Msa0538140 | Msa0844200 | 0.825171 | 5.420123e-54 | -8.615850e-47 |
| Msa0539400 | Msa0844200 | 0.807045 | 6.123644e-50 | -8.615850e-47 |
| Msa0544710 | Msa0844200 | 0.854126 | 1.514863e-61 | -8.615850e-47 |
| Msa0548230 | Msa0844200 | 0.842330 | 2.762281e-58 | -8.615850e-47 |
| Msa0552920 | Msa0844200 | 0.807550 | 4.786189e-50 | -8.615850e-47 |
| Msa0557770 | Msa0844200 | 0.847842 | 8.951017e-60 | -8.615850e-47 |
| Msa0559280 | Msa0844200 | 0.859325 | 4.471603e-63 | -8.615850e-47 |
| Msa0561750 | Msa0844200 | 0.835039 | 2.115741e-56 | -8.615850e-47 |
| Msa0561760 | Msa0844200 | 0.828256 | 9.945527e-55 | -8.615850e-47 |
| Msa0562680 | Msa0844200 | 0.831514 | 1.598865e-55 | -8.615850e-47 |
| Msa0562740 | Msa0844200 | 0.841542 | 4.459914e-58 | -8.615850e-47 |
| Msa0565530 | Msa0844200 | 0.842186 | 3.016450e-58 | -8.615850e-47 |
| Msa0565930 | Msa0844200 | 0.834215 | 3.410064e-56 | -8.615850e-47 |
| Msa0567190 | Msa0844200 | 0.831171 | 1.941727e-55 | -8.615850e-47 |
| Msa0568260 | Msa0844200 | 0.826463 | 2.676305e-54 | -8.615850e-47 |
| Msa0570310 | Msa0844200 | 0.828211 | 1.019900e-54 | -8.615850e-47 |
| Msa0572820 | Msa0844200 | 0.805155 | 1.529791e-49 | -8.615850e-47 |
| Msa0578400 | Msa0844200 | 0.854188 | 1.454074e-61 | -8.615850e-47 |
| Msa0580360 | Msa0844200 | 0.804821 | 1.797042e-49 | -8.615850e-47 |
| Msa0585770 | Msa0844200 | 0.811699 | 6.143467e-51 | -8.615850e-47 |
| Msa0587070 | Msa0844200 | 0.814763 | 1.305507e-51 | -8.615850e-47 |
| Msa0595240 | Msa0844200 | 0.807608 | 4.652502e-50 | -8.615850e-47 |
| Msa0844200 | Msa0848780 | 0.826142 | 3.191075e-54 | -8.615850e-47 |
| Msa0844200 | Msa0849080 | 0.824430 | 8.106045e-54 | -8.615850e-47 |
| Msa0844200 | Msa0866310 | 0.800020 | 1.753061e-48 | -8.615850e-47 |
| Msa0844200 | Msa0866320 | 0.819193 | 1.320989e-52 | -8.615850e-47 |
| Msa0844200 | Msa0866650 | 0.803403 | 3.544857e-49 | -8.615850e-47 |
| Msa0844200 | Msa0880060 | 0.816085 | 6.633680e-52 | -8.615850e-47 |
| Msa0844200 | Msa0880170 | 0.813265 | 2.793892e-51 | -8.615850e-47 |
| Msa0844200 | Msa0906180 | 0.824322 | 8.596924e-54 | -8.615850e-47 |
| Msa0844200 | Msa0929440 | 0.825731 | 3.995689e-54 | -8.615850e-47 |
| Msa0844200 | Msa0938150 | 0.814488 | 1.502010e-51 | -8.615850e-47 |
| Msa0844200 | Msa0938190 | 0.824451 | 8.013692e-54 | -8.615850e-47 |
| Msa0844200 | Msa0946570 | 0.807277 | 5.467021e-50 | -8.615850e-47 |
| Msa0844200 | Msa0948170 | 0.803132 | 4.033170e-49 | -8.615850e-47 |
| Msa0844200 | Msa0967890 | 0.811367 | 7.255549e-51 | -8.615850e-47 |
| Msa0844200 | Msa0982230 | 0.801082 | 1.065108e-48 | -8.615850e-47 |
| Msa0844200 | Msa1014530 | 0.809119 | 2.214756e-50 | -8.615850e-47 |
| Msa0844200 | Msa1015020 | 0.830143 | 3.467502e-55 | -8.615850e-47 |
| Msa0844200 | Msa1016580 | 0.800506 | 1.395745e-48 | -8.615850e-47 |
| Msa0844200 | Msa1032760 | 0.827931 | 1.190933e-54 | -8.615850e-47 |
| Msa0844200 | Msa1033460 | 0.802374 | 5.783388e-49 | -8.615850e-47 |
| Msa0844200 | Msa1040030 | 0.834002 | 3.855232e-56 | -8.615850e-47 |
| Msa0844200 | Msa1055490 | 0.817983 | 2.484762e-52 | -8.615850e-47 |
| Msa0844200 | Msa1066930 | 0.806267 | 8.938600e-50 | -8.615850e-47 |
| Msa0844200 | Msa1066980 | 0.808434 | 3.102475e-50 | -8.615850e-47 |
| Msa0844200 | Msa1071380 | 0.815242 | 1.021921e-51 | -8.615850e-47 |
| Msa0844200 | Msa1088300 | 0.806781 | 6.963349e-50 | -8.615850e-47 |
| Msa0844200 | Msa1092770 | 0.807303 | 5.397736e-50 | -8.615850e-47 |
| Msa0844200 | Msa1100450 | 0.813977 | 1.947150e-51 | -8.615850e-47 |
| Msa0844200 | Msa1113860 | 0.810537 | 1.097043e-50 | -8.615850e-47 |
| Msa0844200 | Msa1126980 | 0.809237 | 2.089886e-50 | -8.615850e-47 |
| Msa0844200 | Msa1143820 | 0.850206 | 1.972094e-60 | -8.615850e-47 |
| Msa0844200 | Msa1144470 | 0.815040 | 1.133498e-51 | -8.615850e-47 |
| Msa0844200 | Msa1154250 | 0.810392 | 1.179480e-50 | -8.615850e-47 |
| Msa0844200 | Msa1156530 | 0.818354 | 2.047789e-52 | -8.615850e-47 |
| Msa0844200 | Msa1177300 | 0.821396 | 4.129173e-53 | -8.615850e-47 |
| Msa0844200 | Msa1185030 | 0.851480 | 8.633623e-61 | -8.615850e-47 |
| Msa0844200 | Msa1186010 | 0.823585 | 1.279840e-53 | -8.615850e-47 |
| Msa0844200 | Msa1203320 | 0.813022 | 3.159381e-51 | -8.615850e-47 |
| Msa0844200 | Msa1206440 | 0.833187 | 6.159091e-56 | -8.615850e-47 |
| Msa0844200 | Msa1212210 | 0.803971 | 2.702216e-49 | -8.615850e-47 |
| Msa0844200 | Msa1213550 | 0.836706 | 7.996112e-57 | -8.615850e-47 |
| Msa0844200 | Msa1223050 | 0.829182 | 5.939236e-55 | -8.615850e-47 |
| Msa0844200 | Msa1223520 | 0.807477 | 4.958555e-50 | -8.615850e-47 |
| Msa0844200 | Msa1225240 | 0.807753 | 4.332996e-50 | -8.615850e-47 |
| Msa0844200 | Msa1225280 | 0.826960 | 2.036286e-54 | -8.615850e-47 |
| Msa0844200 | Msa1229880 | 0.810920 | 9.066348e-51 | -8.615850e-47 |
| Msa0844200 | Msa1235880 | 0.800515 | 1.389830e-48 | -8.615850e-47 |
| Msa0844200 | Msa1236090 | 0.815573 | 8.624601e-52 | -8.615850e-47 |
| Msa0844200 | Msa1239000 | 0.830354 | 3.079496e-55 | -8.615850e-47 |
| Msa0844200 | Msa1250490 | 0.828671 | 7.899376e-55 | -8.615850e-47 |
| Msa0844200 | Msa1258200 | 0.804092 | 2.549905e-49 | -8.615850e-47 |
| Msa0844200 | Msa1263600 | 0.807544 | 4.799435e-50 | -8.615850e-47 |
| Msa0844200 | Msa1265990 | 0.816795 | 4.599886e-52 | -8.615850e-47 |
| Msa0844200 | Msa1269550 | 0.803000 | 4.295535e-49 | -8.615850e-47 |
| Msa0844200 | Msa1301560 | 0.804559 | 2.038487e-49 | -8.615850e-47 |
| Msa0844200 | Msa1302750 | 0.830295 | 3.182373e-55 | -8.615850e-47 |
| Msa0844200 | Msa1303040 | 0.825726 | 4.006838e-54 | -8.615850e-47 |
| Msa0844200 | Msa1317090 | 0.836263 | 1.036949e-56 | -8.615850e-47 |
| Msa0844200 | Msa1317340 | 0.804688 | 1.915891e-49 | -8.615850e-47 |
| Msa0844200 | Msa1325270 | 0.830209 | 3.341268e-55 | -8.615850e-47 |
| Msa0844200 | Msa1331400 | 0.837119 | 6.272060e-57 | -8.615850e-47 |
| Msa0844200 | Msa1336350 | 0.822012 | 2.974681e-53 | -8.615850e-47 |
| Msa0844200 | Msa1349490 | 0.805709 | 1.171086e-49 | -8.615850e-47 |
| Msa0844200 | Msa1350130 | 0.800006 | 1.764463e-48 | -8.615850e-47 |
| Msa0844200 | Msa1352530 | -0.820095 | 8.220037e-53 | -8.615850e-47 |
| Msa0844200 | Msa1357760 | 0.832250 | 1.052142e-55 | -8.615850e-47 |
| Msa0844200 | Msa1361090 | 0.803481 | 3.414414e-49 | -8.615850e-47 |
| Msa0844200 | Msa1364420 | 0.806748 | 7.075446e-50 | -8.615850e-47 |
| Msa0844200 | Msa1366700 | 0.801922 | 7.163461e-49 | -8.615850e-47 |
| Msa0844200 | Msa1368800 | 0.804018 | 2.642554e-49 | -8.615850e-47 |
| Msa0844200 | Msa1369220 | 0.816547 | 5.228358e-52 | -8.615850e-47 |
| Msa0844200 | Msa1371060 | 0.807317 | 5.361363e-50 | -8.615850e-47 |
| Msa0844200 | Msa1371540 | 0.809797 | 1.584077e-50 | -8.615850e-47 |
| Msa0844200 | Msa1371690 | 0.814088 | 1.841021e-51 | -8.615850e-47 |
| Msa0844200 | Msa1372570 | 0.817533 | 3.139465e-52 | -8.615850e-47 |
| Msa0844200 | Msa1373340 | 0.810427 | 1.159024e-50 | -8.615850e-47 |
| Msa0844200 | Msa1374610 | 0.806256 | 8.983667e-50 | -8.615850e-47 |
| Msa0844200 | Msa1376230 | 0.825126 | 5.556416e-54 | -8.615850e-47 |
| Msa0844200 | Msa1376590 | 0.800895 | 1.162680e-48 | -8.615850e-47 |
| Msa0844200 | Msa1381830 | 0.825220 | 5.279875e-54 | -8.615850e-47 |
| Msa0844200 | Msa1382100 | 0.815078 | 1.111323e-51 | -8.615850e-47 |
| Msa0844200 | Msa1388010 | 0.805931 | 1.051992e-49 | -8.615850e-47 |
| Msa0844200 | Msa1405990 | 0.803421 | 3.514437e-49 | -8.615850e-47 |
| Msa0844200 | Msa1414280 | 0.828353 | 9.424171e-55 | -8.615850e-47 |
| Msa0844200 | Msa1425510 | 0.843537 | 1.318069e-58 | -8.615850e-47 |
| Msa0844200 | Msa1429180 | 0.804466 | 2.131466e-49 | -8.615850e-47 |
| Msa0844200 | Msa1435990 | 0.838578 | 2.646459e-57 | -8.615850e-47 |
| Msa0844200 | Msa1437650 | 0.812995 | 3.201434e-51 | -8.615850e-47 |
| Msa0844200 | Msa1444750 | 0.821057 | 4.943951e-53 | -8.615850e-47 |
| Msa0844200 | Msa1453900 | 0.817191 | 3.747993e-52 | -8.615850e-47 |
| Msa0844200 | Msa1455120 | 0.807583 | 4.709256e-50 | -8.615850e-47 |
| Msa0844200 | Msa1465950 | 0.824366 | 8.391083e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844200 | MtrunA17_Chr5g0415171 | 90.667 | 225 | 20 | 1 | 1 | 224 | 1 | 225 | 6.63e-140 | 400 |
| Msa0844200 | MtrunA17_Chr5g0415171 | 57.895 | 114 | 35 | 1 | 262 | 375 | 201 | 301 | 8.05e-29 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0844200 | AT1G59840.3 | 58.447 | 219 | 85 | 4 | 25 | 240 | 16 | 231 | 4.31e-78 | 242 |
| Msa0844200 | AT1G59840.3 | 82.222 | 45 | 8 | 0 | 323 | 367 | 227 | 271 | 8.01e-18 | 83.2 |
| Msa0844200 | AT1G59840.2 | 62.000 | 200 | 72 | 3 | 25 | 221 | 16 | 214 | 4.39e-77 | 240 |
| Msa0844200 | AT1G59840.2 | 82.222 | 45 | 8 | 0 | 323 | 367 | 241 | 285 | 8.22e-18 | 83.6 |
| Msa0844200 | AT1G59840.1 | 62.000 | 200 | 72 | 3 | 25 | 221 | 16 | 214 | 4.39e-77 | 240 |
| Msa0844200 | AT1G59840.1 | 82.222 | 45 | 8 | 0 | 323 | 367 | 241 | 285 | 8.22e-18 | 83.6 |
Find 80 sgRNAs with CRISPR-Local
Find 471 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATCGCGTTTGGGGTTT+GGG | 0.157929 | 5_4:+22510786 | None:intergenic |
| ACTTGATTTCAGTGCTAATT+TGG | 0.169618 | 5_4:-22504424 | Msa0844200:three_prime_UTR |
| ATTGGCTGTCACTAATATTT+TGG | 0.169732 | 5_4:-22509594 | Msa0844200:CDS |
| GATAAAGGAATTGCAATTAT+TGG | 0.221692 | 5_4:-22504888 | Msa0844200:CDS |
| CGCGTTTGGGGTTTGGGGTT+CGG | 0.244937 | 5_4:+22510792 | None:intergenic |
| AGCAATTGCGTTCTTCAATT+TGG | 0.245662 | 5_4:-22508269 | Msa0844200:CDS |
| CGAGCAGACCTCTTAACTTT+AGG | 0.254418 | 5_4:-22509617 | Msa0844200:CDS |
| GCTTACCACACTTATAGATT+TGG | 0.289785 | 5_4:+22509544 | None:intergenic |
| TTACAACCACTTGGAGATAA+AGG | 0.298640 | 5_4:-22504903 | Msa0844200:CDS |
| AGAAAATCGCGTTTGGGGTT+TGG | 0.300727 | 5_4:+22510785 | None:intergenic |
| TGATCCTTGCATCAATTTAT+CGG | 0.323093 | 5_4:+22508196 | None:intergenic |
| CTTACCACACTTATAGATTT+GGG | 0.327187 | 5_4:+22509545 | None:intergenic |
| GATGCAAGGATCAGTATATC+AGG | 0.330105 | 5_4:-22508186 | Msa0844200:CDS |
| TTTGCTGCAGAATCTTCTCC+TGG | 0.331987 | 5_4:-22508245 | Msa0844200:CDS |
| AGCTCCGTACGCGCAACGTC+AGG | 0.341746 | 5_4:+22508761 | None:intergenic |
| TCAGGTAGAAAATCGCGTTT+GGG | 0.371139 | 5_4:+22510779 | None:intergenic |
| CTCTTCAATCGAACCATCTC+CGG | 0.387017 | 5_4:-22510683 | Msa0844200:CDS |
| CTCATAAAATTCATCTGATC+TGG | 0.390605 | 5_4:+22505223 | None:intergenic |
| TATCAGGGTGTTATGAAATC+TGG | 0.393157 | 5_4:-22508170 | Msa0844200:CDS |
| GTTGTTAAACTGTTTGCATT+TGG | 0.396115 | 5_4:+22510975 | None:intergenic |
| ATCAGGTAGAAAATCGCGTT+TGG | 0.417803 | 5_4:+22510778 | None:intergenic |
| ATTGCTCCCGTCGCCGATGC+CGG | 0.425718 | 5_4:-22510659 | Msa0844200:CDS |
| GTAGCCTTCTATTCCTTCCT+CGG | 0.428522 | 5_4:-22505067 | Msa0844200:intron |
| AGGTTTCACTACTTCTGATC+AGG | 0.430529 | 5_4:-22504850 | Msa0844200:intron |
| AGAACCGAGGAAGGAATAGA+AGG | 0.447519 | 5_4:+22505063 | None:intergenic |
| CTCCCGTCGCCGATGCCGGC+AGG | 0.447988 | 5_4:-22510655 | Msa0844200:intron |
| TACCTATATCGGAGAGAAGC+TGG | 0.448013 | 5_4:-22504535 | Msa0844200:CDS |
| ATCGGCGACGGGAGCAATGC+CGG | 0.450747 | 5_4:+22510664 | None:intergenic |
| CAGGCATGGATTACCTATAT+CGG | 0.454266 | 5_4:-22504546 | Msa0844200:CDS |
| ATCCAGCTTCTCTCCGATAT+AGG | 0.459920 | 5_4:+22504533 | None:intergenic |
| GAAACGGCACCAACGTAGAT+CGG | 0.460412 | 5_4:+22510719 | None:intergenic |
| AACCTGCCGGCATCGGCGAC+GGG | 0.462272 | 5_4:+22510653 | None:intergenic |
| TTGCGCGTACGGAGCTGCTC+TGG | 0.470920 | 5_4:-22508754 | Msa0844200:intron |
| AGACCTCTTAACTTTAGGAT+TGG | 0.481817 | 5_4:-22509612 | Msa0844200:CDS |
| GAGCGCAGTTCCCGCTTCCA+TGG | 0.482634 | 5_4:+22510946 | None:intergenic |
| TCTCCCTGACGTTGCGCGTA+CGG | 0.489245 | 5_4:-22508765 | Msa0844200:CDS |
| CAGTATTTAAATTTAAATTG+AGG | 0.493327 | 5_4:-22504348 | Msa0844200:three_prime_UTR |
| AAACGGCACCAACGTAGATC+GGG | 0.493794 | 5_4:+22510720 | None:intergenic |
| AAACATCGCAGCTATGTCAT+TGG | 0.495973 | 5_4:+22506937 | None:intergenic |
| ACAACAAATTTCCATGGAAG+CGG | 0.499618 | 5_4:-22510957 | Msa0844200:exon |
| TTGCTGCAGAATCTTCTCCT+GGG | 0.513330 | 5_4:-22508244 | Msa0844200:CDS |
| AAATGAGAACCTGCCGGCAT+CGG | 0.513828 | 5_4:+22510646 | None:intergenic |
| GACGGGAGCAATGCCGGAGA+TGG | 0.516836 | 5_4:+22510670 | None:intergenic |
| AAAATCGCGTTTGGGGTTTG+GGG | 0.521649 | 5_4:+22510787 | None:intergenic |
| AGAAAGTGAGTTTGAGTGTG+GGG | 0.523508 | 5_4:+22510905 | None:intergenic |
| AAAGGAATTGCAATTATTGG+TGG | 0.524269 | 5_4:-22504885 | Msa0844200:CDS |
| AACAAGCAGTTTCTGATGGC+AGG | 0.526997 | 5_4:-22506850 | Msa0844200:intron |
| GAACCTGCCGGCATCGGCGA+CGG | 0.533884 | 5_4:+22510652 | None:intergenic |
| CAGCCAATCCTAAAGTTAAG+AGG | 0.537186 | 5_4:+22509609 | None:intergenic |
| CAACAAATTTCCATGGAAGC+GGG | 0.541995 | 5_4:-22510956 | Msa0844200:exon |
| GAAAGTGAGTTTGAGTGTGG+GGG | 0.546419 | 5_4:+22510906 | None:intergenic |
| ATTGGTGGTGACACAATTCG+AGG | 0.546724 | 5_4:-22504870 | Msa0844200:CDS |
| GCAGAATCTTCTCCTGGGAA+TGG | 0.549364 | 5_4:-22508239 | Msa0844200:CDS |
| AATAACAAGTGATCGGCAGC+AGG | 0.550991 | 5_4:+22508301 | None:intergenic |
| CTCACAGCCTCGCCATTCCC+AGG | 0.562199 | 5_4:+22508227 | None:intergenic |
| CGTAAACAATAACAAGTGAT+CGG | 0.569368 | 5_4:+22508294 | None:intergenic |
| ATCTGGTCTCTCTGGCACAA+TGG | 0.572123 | 5_4:+22506892 | None:intergenic |
| AGTTTAACAACAAATTTCCA+TGG | 0.572234 | 5_4:-22510963 | Msa0844200:exon |
| TAAGAAAGTGAGTTTGAGTG+TGG | 0.579150 | 5_4:+22510903 | None:intergenic |
| GCTCCGTACGCGCAACGTCA+GGG | 0.581790 | 5_4:+22508762 | None:intergenic |
| AGTATCAACAAACATCAGAC+AGG | 0.587067 | 5_4:+22504444 | None:intergenic |
| GATGGTTCGATTGAAGAGTA+CGG | 0.587779 | 5_4:+22510688 | None:intergenic |
| GCACCAACGTAGATCGGGAG+GGG | 0.588306 | 5_4:+22510725 | None:intergenic |
| GCTATGTCATTGGCAATGAA+AGG | 0.593075 | 5_4:+22506947 | None:intergenic |
| GAGTACGGCGAAGAGAGAAA+CGG | 0.595812 | 5_4:+22510703 | None:intergenic |
| TTTGTCCAGGTAAATCCTCA+GGG | 0.596877 | 5_4:-22508815 | Msa0844200:intron |
| ATGGAACAAGCAGTTTCTGA+TGG | 0.609356 | 5_4:-22506854 | Msa0844200:CDS |
| CATTGGCAATGAAAGGATGA+TGG | 0.609450 | 5_4:+22506954 | None:intergenic |
| CGGCACCAACGTAGATCGGG+AGG | 0.610101 | 5_4:+22510723 | None:intergenic |
| AAGAAAGTGAGTTTGAGTGT+GGG | 0.616503 | 5_4:+22510904 | None:intergenic |
| GCAATTCCTTTATCTCCAAG+TGG | 0.617458 | 5_4:+22504897 | None:intergenic |
| ATGCAAGGATCAGTATATCA+GGG | 0.627292 | 5_4:-22508185 | Msa0844200:CDS |
| AAAACCCAAATCTATAAGTG+TGG | 0.629385 | 5_4:-22509549 | Msa0844200:intron |
| ATCTTCTCCTGGGAATGGCG+AGG | 0.633157 | 5_4:-22508234 | Msa0844200:CDS |
| TTCTTGCATTCAACTCCCTG+AGG | 0.634438 | 5_4:+22508800 | None:intergenic |
| GACACCGATAAATTGATGCA+AGG | 0.639272 | 5_4:-22508200 | Msa0844200:CDS |
| GAATGGCGAGGCTGTGAGTG+TGG | 0.647858 | 5_4:-22508222 | Msa0844200:CDS |
| GGCACCAACGTAGATCGGGA+GGG | 0.654842 | 5_4:+22510724 | None:intergenic |
| CGACCCCTCCCGATCTACGT+TGG | 0.669497 | 5_4:-22510728 | Msa0844200:CDS |
| CAGGTAGAAAATCGCGTTTG+GGG | 0.684893 | 5_4:+22510780 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTATTTGAGAAAATTAT+TGG | + | chr5_4:22505393-22505412 | None:intergenic | 10.0% |
| !!! | ATATATTTTTGCAAATATTT+TGG | + | chr5_4:22506358-22506377 | None:intergenic | 10.0% |
| !! | AAAATTATTGGAGATATAAT+AGG | + | chr5_4:22505381-22505400 | None:intergenic | 15.0% |
| !!! | AATTTTAAACAAATCTACAA+AGG | + | chr5_4:22506113-22506132 | None:intergenic | 15.0% |
| !! | ATGATTGAAATTTCAAAATT+TGG | - | chr5_4:22506806-22506825 | Msa0844200:intron | 15.0% |
| !!! | ATCTTTTATTAACTTTTATC+AGG | - | chr5_4:22507102-22507121 | Msa0844200:intron | 15.0% |
| !!! | TCTTTTATTAACTTTTATCA+GGG | - | chr5_4:22507103-22507122 | Msa0844200:intron | 15.0% |
| !! | TTTGAAAAATACTATAAATC+AGG | - | chr5_4:22507976-22507995 | Msa0844200:intron | 15.0% |
| !! | TTGAAAAATACTATAAATCA+GGG | - | chr5_4:22507977-22507996 | Msa0844200:intron | 15.0% |
| !!! | TTTTTTAGCAAAACAATAAA+TGG | - | chr5_4:22510021-22510040 | Msa0844200:intron | 15.0% |
| !!! | TTTTTACTAACAAATGTTAT+TGG | - | chr5_4:22510497-22510516 | Msa0844200:intron | 15.0% |
| !! | CAGTATTTAAATTTAAATTG+AGG | - | chr5_4:22511103-22511122 | Msa0844200:five_prime_UTR | 15.0% |
| !! | AAAAACTTAATTGATTAGAT+TGG | + | chr5_4:22511129-22511148 | None:intergenic | 15.0% |
| !!! | TCTGATTTTTACAGTTTTAA+CGG | - | chr5_4:22504409-22504428 | Msa0844200:three_prime_UTR | 20.0% |
| !! | TCATAACAAAAATTACATGT+CGG | + | chr5_4:22505201-22505220 | None:intergenic | 20.0% |
| !!! | GTAATTTTTGTTATGAAACA+TGG | - | chr5_4:22505205-22505224 | Msa0844200:CDS | 20.0% |
| !!! | ATAATAGGTTAGTTATTAGT+TGG | + | chr5_4:22505366-22505385 | None:intergenic | 20.0% |
| !! | TTTCATTCTATCTAATTTAC+TGG | - | chr5_4:22505713-22505732 | Msa0844200:intron | 20.0% |
| !! | TGAGTTAATGATTGTTAATT+AGG | - | chr5_4:22505786-22505805 | Msa0844200:intron | 20.0% |
| !! | GAGTTAATGATTGTTAATTA+GGG | - | chr5_4:22505787-22505806 | Msa0844200:intron | 20.0% |
| !! | GAAAACAATTAAGTAGAAAT+AGG | - | chr5_4:22506175-22506194 | Msa0844200:intron | 20.0% |
| !! | TATTTGCAAAAATATATGCA+CGG | - | chr5_4:22506361-22506380 | Msa0844200:intron | 20.0% |
| !!! | TCTAGAAAAGTATTAGATTA+GGG | + | chr5_4:22506550-22506569 | None:intergenic | 20.0% |
| !!! | TTCTAGAAAAGTATTAGATT+AGG | + | chr5_4:22506551-22506570 | None:intergenic | 20.0% |
| !! | ATTAATATGACTTTCTTTCA+TGG | - | chr5_4:22506832-22506851 | Msa0844200:intron | 20.0% |
| !!! | TTTCATACACTAACTATTTT+GGG | + | chr5_4:22507802-22507821 | None:intergenic | 20.0% |
| !!! | TTTTCATACACTAACTATTT+TGG | + | chr5_4:22507803-22507822 | None:intergenic | 20.0% |
| !!! | TATAATTTCACTATTTTTGG+CGG | + | chr5_4:22507856-22507875 | None:intergenic | 20.0% |
| !!! | GGATATAATTTCACTATTTT+TGG | + | chr5_4:22507859-22507878 | None:intergenic | 20.0% |
| !! | ACGATACTATAGAATTATAT+TGG | - | chr5_4:22508102-22508121 | Msa0844200:intron | 20.0% |
| !! | ACTTGAAAAATCTGATTAAA+TGG | - | chr5_4:22509657-22509676 | Msa0844200:intron | 20.0% |
| !!! | ATGCTATGTTTCTATATTTA+TGG | + | chr5_4:22509981-22510000 | None:intergenic | 20.0% |
| !! | AAATATAGAAACATAGCATT+TGG | - | chr5_4:22509982-22510001 | Msa0844200:intron | 20.0% |
| !! | AATAAATGGTAACTATAAGT+TGG | - | chr5_4:22510035-22510054 | Msa0844200:intron | 20.0% |
| !! | GATATATTAGTATAACATGT+AGG | + | chr5_4:22510690-22510709 | None:intergenic | 20.0% |
| !! | AGTAATACAATTCATTATGT+TGG | - | chr5_4:22510803-22510822 | Msa0844200:CDS | 20.0% |
| !!! | TTGTTTCACATATTTTGAAA+GGG | + | chr5_4:22510948-22510967 | None:intergenic | 20.0% |
| !!! | ATTTTTACAGTTTTAACGGT+TGG | - | chr5_4:22504413-22504432 | Msa0844200:three_prime_UTR | 25.0% |
| ! | AGTTTAACAACAAATTTCCA+TGG | - | chr5_4:22504488-22504507 | Msa0844200:CDS | 25.0% |
| !!! | TGTTGTTGAATTTTGAGTAA+AGG | - | chr5_4:22504923-22504942 | Msa0844200:intron | 25.0% |
| !!! | ACTTATAGATTTGGGTTTTA+TGG | + | chr5_4:22505901-22505920 | None:intergenic | 25.0% |
| ! | AGAAGTAAATAACAGTGAAA+AGG | + | chr5_4:22505939-22505958 | None:intergenic | 25.0% |
| ! | AGATTCATGATAAAGGAAAA+TGG | + | chr5_4:22505964-22505983 | None:intergenic | 25.0% |
| ! | AACAAACAGATTCATGATAA+AGG | + | chr5_4:22505971-22505990 | None:intergenic | 25.0% |
| !! | ATACTTTTACTGTCAACAAA+CGG | + | chr5_4:22507084-22507103 | None:intergenic | 25.0% |
| ! | TGATGAACAGCATATAAATA+TGG | + | chr5_4:22507563-22507582 | None:intergenic | 25.0% |
| !!! | AAAGAACTTGTTAAAGTACA+AGG | + | chr5_4:22507589-22507608 | None:intergenic | 25.0% |
| !! | TTCATACACTAACTATTTTG+GGG | + | chr5_4:22507801-22507820 | None:intergenic | 25.0% |
| ! | TTATAAAACCAACTTACTCA+TGG | + | chr5_4:22508141-22508160 | None:intergenic | 25.0% |
| !!! | TTGGTTTTATAAATTGCTTC+AGG | - | chr5_4:22508149-22508168 | Msa0844200:intron | 25.0% |
| !!! | TGGTTTTATAAATTGCTTCA+GGG | - | chr5_4:22508150-22508169 | Msa0844200:intron | 25.0% |
| ! | GGTATTTCAAAATCATATCA+GGG | - | chr5_4:22508235-22508254 | Msa0844200:CDS | 25.0% |
| ! | GTATTTCAAAATCATATCAG+GGG | - | chr5_4:22508236-22508255 | Msa0844200:CDS | 25.0% |
| !! | AAGGGACATCTATAAATTTT+AGG | - | chr5_4:22508280-22508299 | Msa0844200:CDS | 25.0% |
| ! | ATCAAGATAACATATCAGAT+CGG | + | chr5_4:22508382-22508401 | None:intergenic | 25.0% |
| !!! | TGTTATCTTGATGGATTTAT+TGG | - | chr5_4:22508390-22508409 | Msa0844200:intron | 25.0% |
| ! | ATGATTTCCCAAAAAAAATC+TGG | + | chr5_4:22508579-22508598 | None:intergenic | 25.0% |
| !!! | AGATTTTTTTTGGGAAATCA+TGG | - | chr5_4:22508578-22508597 | Msa0844200:intron | 25.0% |
| ! | TTGGGTACTTATAATAATAG+TGG | + | chr5_4:22508714-22508733 | None:intergenic | 25.0% |
| ! | TTATAAGTACCCAATTACTT+TGG | - | chr5_4:22508720-22508739 | Msa0844200:intron | 25.0% |
| ! | TATAAGTACCCAATTACTTT+GGG | - | chr5_4:22508721-22508740 | Msa0844200:intron | 25.0% |
| !!! | CCTTAATATCTAGCTTTAAA+GGG | + | chr5_4:22508753-22508772 | None:intergenic | 25.0% |
| !!! | CCTTTAAAGCTAGATATTAA+GGG | - | chr5_4:22508751-22508770 | Msa0844200:intron | 25.0% |
| !!! | CTTTAAAGCTAGATATTAAG+GGG | - | chr5_4:22508752-22508771 | Msa0844200:intron | 25.0% |
| !!! | AGATTTTTCAAGTTTCCATA+TGG | + | chr5_4:22509650-22509669 | None:intergenic | 25.0% |
| ! | AAAAAAATGAGACTATATCC+AGG | + | chr5_4:22509851-22509870 | None:intergenic | 25.0% |
| ! | TATGTTTCAGTCCAAAAAAA+AGG | - | chr5_4:22510172-22510191 | Msa0844200:intron | 25.0% |
| !!! | AAACTGTTTCTCCTTTTTTT+TGG | + | chr5_4:22510186-22510205 | None:intergenic | 25.0% |
| !! | AAAAAAGGAGAAACAGTTTT+TGG | - | chr5_4:22510187-22510206 | Msa0844200:intron | 25.0% |
| !! | AAAAAGGAGAAACAGTTTTT+GGG | - | chr5_4:22510188-22510207 | Msa0844200:intron | 25.0% |
| ! | GATAAAGGAATTGCAATTAT+TGG | - | chr5_4:22510563-22510582 | Msa0844200:intron | 25.0% |
| !!! | GTTGTTTCACATATTTTGAA+AGG | + | chr5_4:22510949-22510968 | None:intergenic | 25.0% |
| GTTGTTAAACTGTTTGCATT+TGG | + | chr5_4:22504479-22504498 | None:intergenic | 30.0% | |
| CTACTTAAAACTGTTTGCAT+TGG | + | chr5_4:22505107-22505126 | None:intergenic | 30.0% | |
| !!! | CAATGCAAACAGTTTTAAGT+AGG | - | chr5_4:22505105-22505124 | Msa0844200:intron | 30.0% |
| GTAGGTTCTACATATATTCT+TGG | - | chr5_4:22505123-22505142 | Msa0844200:intron | 30.0% | |
| AGTGTCTATAAATAGAGTTG+AGG | + | chr5_4:22505324-22505343 | None:intergenic | 30.0% | |
| ATGTAATCAATCACATGTGT+AGG | + | chr5_4:22505462-22505481 | None:intergenic | 30.0% | |
| ! | ATTGGCTGTCACTAATATTT+TGG | - | chr5_4:22505857-22505876 | Msa0844200:intron | 30.0% |
| AAAACCCAAATCTATAAGTG+TGG | - | chr5_4:22505902-22505921 | Msa0844200:intron | 30.0% | |
| CTTACCACACTTATAGATTT+GGG | + | chr5_4:22505909-22505928 | None:intergenic | 30.0% | |
| AATAACAGTGAAAAGGAATG+AGG | + | chr5_4:22505932-22505951 | None:intergenic | 30.0% | |
| AGATCCAATCACATCTAATT+AGG | - | chr5_4:22506309-22506328 | Msa0844200:intron | 30.0% | |
| ACATCCTAATTAGATGTGAT+TGG | + | chr5_4:22506316-22506335 | None:intergenic | 30.0% | |
| ! | AGATTTCCTGTTTTCACTTT+TGG | + | chr5_4:22506525-22506544 | None:intergenic | 30.0% |
| ! | ATCGTTAAGTCAGCTTATTT+TGG | + | chr5_4:22506598-22506617 | None:intergenic | 30.0% |
| GACAAAAACAAGCCTATTAT+CGG | + | chr5_4:22506622-22506641 | None:intergenic | 30.0% | |
| ! | TACTTTTACTGTCAACAAAC+GGG | + | chr5_4:22507083-22507102 | None:intergenic | 30.0% |
| CGTAAACAATAACAAGTGAT+CGG | + | chr5_4:22507160-22507179 | None:intergenic | 30.0% | |
| TGATCCTTGCATCAATTTAT+CGG | + | chr5_4:22507258-22507277 | None:intergenic | 30.0% | |
| TTGTGATGAATGACTCATAT+TGG | + | chr5_4:22507335-22507354 | None:intergenic | 30.0% | |
| !! | TCATGTGGTACTTTTTATTG+AGG | - | chr5_4:22507375-22507394 | Msa0844200:intron | 30.0% |
| TACATGTTTAGAGAGTTACT+TGG | - | chr5_4:22507436-22507455 | Msa0844200:intron | 30.0% | |
| CCAATTTATCTCTTTATCCT+GGG | - | chr5_4:22507459-22507478 | Msa0844200:intron | 30.0% | |
| !!! | GTTTGACTCTGAAATGTTTT+TGG | + | chr5_4:22507765-22507784 | None:intergenic | 30.0% |
| AGAGTCAAACATTATCACAA+TGG | - | chr5_4:22507775-22507794 | Msa0844200:intron | 30.0% | |
| GAGTGAAGAACAATTTAGAT+AGG | - | chr5_4:22507929-22507948 | Msa0844200:intron | 30.0% | |
| ATAAATCAGGGAATGAAAAC+AGG | - | chr5_4:22507989-22508008 | Msa0844200:intron | 30.0% | |
| TAAATCAGGGAATGAAAACA+GGG | - | chr5_4:22507990-22508009 | Msa0844200:intron | 30.0% | |
| TGGAATTCTACATATGTGAT+TGG | + | chr5_4:22508188-22508207 | None:intergenic | 30.0% | |
| !! | TCGATTTGGAAATCATACAA+GGG | - | chr5_4:22508214-22508233 | Msa0844200:CDS | 30.0% |
| GGGTATTTCAAAATCATATC+AGG | - | chr5_4:22508234-22508253 | Msa0844200:CDS | 30.0% | |
| ! | TGTATTAGGAAGGTATGAAA+AGG | - | chr5_4:22508261-22508280 | Msa0844200:CDS | 30.0% |
| ! | GTATTAGGAAGGTATGAAAA+GGG | - | chr5_4:22508262-22508281 | Msa0844200:CDS | 30.0% |
| CAAATATAAGATACTATCCC+CGG | - | chr5_4:22508324-22508343 | Msa0844200:CDS | 30.0% | |
| GATCTGATATGTTATCTTGA+TGG | - | chr5_4:22508381-22508400 | Msa0844200:intron | 30.0% | |
| !! | ATCTTGATGGATTTATTGGA+CGG | - | chr5_4:22508394-22508413 | Msa0844200:intron | 30.0% |
| !!! | AGAGGGTCTATATACTTTTT+TGG | - | chr5_4:22508428-22508447 | Msa0844200:intron | 30.0% |
| !!! | TCTATATACTTTTTTGGTGG+TGG | - | chr5_4:22508434-22508453 | Msa0844200:intron | 30.0% |
| !!! | AGAGAGACCAGATTTTTTTT+GGG | - | chr5_4:22508569-22508588 | Msa0844200:intron | 30.0% |
| !! | CCCTTTAAAGCTAGATATTA+AGG | - | chr5_4:22508750-22508769 | Msa0844200:intron | 30.0% |
| !! | CCCTTAATATCTAGCTTTAA+AGG | + | chr5_4:22508754-22508773 | None:intergenic | 30.0% |
| TAGATAGATATGGTATCAAG+TGG | + | chr5_4:22509037-22509056 | None:intergenic | 30.0% | |
| AGTGGGATTCTGTTATATAT+GGG | + | chr5_4:22509067-22509086 | None:intergenic | 30.0% | |
| TAGTGGGATTCTGTTATATA+TGG | + | chr5_4:22509068-22509087 | None:intergenic | 30.0% | |
| CAAAGAGGAAAATTAGAGAA+GGG | + | chr5_4:22509132-22509151 | None:intergenic | 30.0% | |
| AAGGCATAAAGATCATATCA+GGG | - | chr5_4:22509292-22509311 | Msa0844200:intron | 30.0% | |
| ! | ACTATCATGTTTGTTAGCTT+GGG | + | chr5_4:22509319-22509338 | None:intergenic | 30.0% |
| ! | TAACAAACATGATAGTGCAT+TGG | - | chr5_4:22509323-22509342 | Msa0844200:intron | 30.0% |
| TAGTGCATTGGAATTTGAAT+TGG | - | chr5_4:22509335-22509354 | Msa0844200:intron | 30.0% | |
| AGTGCATTGGAATTTGAATT+GGG | - | chr5_4:22509336-22509355 | Msa0844200:intron | 30.0% | |
| TTATGGAAGTTTCAATCAGT+AGG | + | chr5_4:22509480-22509499 | None:intergenic | 30.0% | |
| GGATTATTGTTGCTATGTTA+TGG | + | chr5_4:22509497-22509516 | None:intergenic | 30.0% | |
| AAAAAGAGACCAACTATAGT+CGG | + | chr5_4:22509723-22509742 | None:intergenic | 30.0% | |
| TGTAGTTGAGAAAATCCAAT+TGG | - | chr5_4:22509795-22509814 | Msa0844200:intron | 30.0% | |
| TATAGATACGAGATCACATA+AGG | + | chr5_4:22510071-22510090 | None:intergenic | 30.0% | |
| ! | AAAAGGAGAAACAGTTTTTG+GGG | - | chr5_4:22510189-22510208 | Msa0844200:intron | 30.0% |
| CTCATAAAATTCATCTGATC+TGG | + | chr5_4:22510231-22510250 | None:intergenic | 30.0% | |
| ! | CAGATCAGATGAATTTTATG+AGG | - | chr5_4:22510229-22510248 | Msa0844200:intron | 30.0% |
| ATGAGGAAAAAGAATAGAGA+TGG | - | chr5_4:22510246-22510265 | Msa0844200:intron | 30.0% | |
| TGAGGAAAAAGAATAGAGAT+GGG | - | chr5_4:22510247-22510266 | Msa0844200:intron | 30.0% | |
| ! | GCAAAAGTTGTTGATTACAA+TGG | + | chr5_4:22510465-22510484 | None:intergenic | 30.0% |
| !! | TGGTACAATTGTTATTTCCT+AGG | - | chr5_4:22510517-22510536 | Msa0844200:intron | 30.0% |
| AAAGGAATTGCAATTATTGG+TGG | - | chr5_4:22510566-22510585 | Msa0844200:intron | 30.0% | |
| TGTTAAACTGAAACTTGACA+TGG | + | chr5_4:22510784-22510803 | None:intergenic | 30.0% | |
| TTAAACAAGGAACAATTTGC+AGG | + | chr5_4:22510830-22510849 | None:intergenic | 30.0% | |
| ATAACCATTGAAATGCATAC+AGG | - | chr5_4:22510886-22510905 | Msa0844200:CDS | 30.0% | |
| ACTTGATTTCAGTGCTAATT+TGG | - | chr5_4:22511027-22511046 | Msa0844200:five_prime_UTR | 30.0% | |
| !! | TTGCATTTGGTTTCCGTTTT+TGG | + | chr5_4:22504466-22504485 | None:intergenic | 35.0% |
| ACAACAAATTTCCATGGAAG+CGG | - | chr5_4:22504494-22504513 | Msa0844200:CDS | 35.0% | |
| AAGAAAGTGAGTTTGAGTGT+GGG | + | chr5_4:22504550-22504569 | None:intergenic | 35.0% | |
| TAAGAAAGTGAGTTTGAGTG+TGG | + | chr5_4:22504551-22504570 | None:intergenic | 35.0% | |
| !! | AAAAGTGTGAACGCTGTTTT+TGG | + | chr5_4:22504600-22504619 | None:intergenic | 35.0% |
| TTGTTATAAGCCGCGAATTA+AGG | + | chr5_4:22504949-22504968 | None:intergenic | 35.0% | |
| CTTTCTCTCAACTTTATCCA+TGG | + | chr5_4:22505234-22505253 | None:intergenic | 35.0% | |
| ! | GGTTAGTTATTAGTTGGTGT+TGG | + | chr5_4:22505360-22505379 | None:intergenic | 35.0% |
| TACACTTCATATGAGACAGA+GGG | + | chr5_4:22505514-22505533 | None:intergenic | 35.0% | |
| TTACACTTCATATGAGACAG+AGG | + | chr5_4:22505515-22505534 | None:intergenic | 35.0% | |
| TTAGTCTCAAATTGAAGCTG+TGG | - | chr5_4:22505548-22505567 | Msa0844200:intron | 35.0% | |
| ACATCTTCGATCTCAAGTAT+CGG | + | chr5_4:22505616-22505635 | None:intergenic | 35.0% | |
| ACTTGAGATCGAAGATGTAT+TGG | - | chr5_4:22505618-22505637 | Msa0844200:intron | 35.0% | |
| CTTGAGATCGAAGATGTATT+GGG | - | chr5_4:22505619-22505638 | Msa0844200:intron | 35.0% | |
| TGTTGTAACAATGTCTGACA+CGG | + | chr5_4:22505659-22505678 | None:intergenic | 35.0% | |
| CAATGTCTTATCATCTAGTG+TGG | - | chr5_4:22505753-22505772 | Msa0844200:intron | 35.0% | |
| !! | AGACCTCTTAACTTTAGGAT+TGG | - | chr5_4:22505839-22505858 | Msa0844200:intron | 35.0% |
| GCTTACCACACTTATAGATT+TGG | + | chr5_4:22505910-22505929 | None:intergenic | 35.0% | |
| GTGTAACCAAAAGTGAAAAC+AGG | - | chr5_4:22506516-22506535 | Msa0844200:intron | 35.0% | |
| !!! | TAATAGGCTTGTTTTTGTCC+AGG | - | chr5_4:22506623-22506642 | Msa0844200:intron | 35.0% |
| ! | GTACAGAACAAGAAAGTACA+TGG | + | chr5_4:22506778-22506797 | None:intergenic | 35.0% |
| ACATTATGCGCAGTAAAAAG+AGG | - | chr5_4:22506881-22506900 | Msa0844200:CDS | 35.0% | |
| CATTATGCGCAGTAAAAAGA+GGG | - | chr5_4:22506882-22506901 | Msa0844200:CDS | 35.0% | |
| GTAAAAAGAGGGATAAGTTG+TGG | - | chr5_4:22506893-22506912 | Msa0844200:CDS | 35.0% | |
| ! | GTCATGATTAGCCAGTAATA+TGG | - | chr5_4:22507029-22507048 | Msa0844200:intron | 35.0% |
| AGCAATAGCTTCCATATTAC+TGG | + | chr5_4:22507043-22507062 | None:intergenic | 35.0% | |
| ! | TATTAACTTTTATCAGGGCG+TGG | - | chr5_4:22507108-22507127 | Msa0844200:intron | 35.0% |
| ! | ATTAACTTTTATCAGGGCGT+GGG | - | chr5_4:22507109-22507128 | Msa0844200:intron | 35.0% |
| AGCAATTGCGTTCTTCAATT+TGG | - | chr5_4:22507182-22507201 | Msa0844200:intron | 35.0% | |
| ATGCAAGGATCAGTATATCA+GGG | - | chr5_4:22507266-22507285 | Msa0844200:intron | 35.0% | |
| ! | TATCAGGGTGTTATGAAATC+TGG | - | chr5_4:22507281-22507300 | Msa0844200:intron | 35.0% |
| GCCAATTTATCTCTTTATCC+TGG | - | chr5_4:22507458-22507477 | Msa0844200:intron | 35.0% | |
| CCCAGGATAAAGAGATAAAT+TGG | + | chr5_4:22507462-22507481 | None:intergenic | 35.0% | |
| TGAGTATTTGAAGGCAGAAA+TGG | + | chr5_4:22507497-22507516 | None:intergenic | 35.0% | |
| ATTTCTGCCTTCAAATACTC+AGG | - | chr5_4:22507496-22507515 | Msa0844200:intron | 35.0% | |
| TGTCACAATGCTTCTAATCT+TGG | - | chr5_4:22507660-22507679 | Msa0844200:intron | 35.0% | |
| CAAAATGTTGAGAGAAATCC+AGG | + | chr5_4:22507690-22507709 | None:intergenic | 35.0% | |
| ! | GGATTTCTCTCAACATTTTG+TGG | - | chr5_4:22507690-22507709 | Msa0844200:intron | 35.0% |
| CAGTACAATGATAGCTGTAA+AGG | + | chr5_4:22508043-22508062 | None:intergenic | 35.0% | |
| ATCATTGTACTGAAGTACGA+AGG | - | chr5_4:22508051-22508070 | Msa0844200:intron | 35.0% | |
| ACATATGTGATTGGAATTCG+TGG | + | chr5_4:22508179-22508198 | None:intergenic | 35.0% | |
| !! | CTCGATTTGGAAATCATACA+AGG | - | chr5_4:22508213-22508232 | Msa0844200:CDS | 35.0% |
| ATTTATTGGACGGTTAGAGA+AGG | - | chr5_4:22508404-22508423 | Msa0844200:intron | 35.0% | |
| !!! | GGGTCTATATACTTTTTTGG+TGG | - | chr5_4:22508431-22508450 | Msa0844200:intron | 35.0% |
| GCCAAATATTCCTATTTCGT+AGG | - | chr5_4:22508468-22508487 | Msa0844200:intron | 35.0% | |
| GCCTACGAAATAGGAATATT+TGG | + | chr5_4:22508472-22508491 | None:intergenic | 35.0% | |
| CAAAAAAAATCTGGTCTCTC+TGG | + | chr5_4:22508570-22508589 | None:intergenic | 35.0% | |
| !!! | CAGAGAGACCAGATTTTTTT+TGG | - | chr5_4:22508568-22508587 | Msa0844200:intron | 35.0% |
| TATGGTTGTCAGTTTGTAAG+TGG | + | chr5_4:22508654-22508673 | None:intergenic | 35.0% | |
| GTCAATACGAACATAACTGA+AGG | - | chr5_4:22508686-22508705 | Msa0844200:intron | 35.0% | |
| GGAGATTTCCCAAAGTAATT+GGG | + | chr5_4:22508732-22508751 | None:intergenic | 35.0% | |
| CATTCCATACTTCTCGAAAT+GGG | - | chr5_4:22508807-22508826 | Msa0844200:CDS | 35.0% | |
| GTTCACATCAGAACATGATA+GGG | + | chr5_4:22508859-22508878 | None:intergenic | 35.0% | |
| TTTCTGCACTTTATGATGCT+CGG | + | chr5_4:22508881-22508900 | None:intergenic | 35.0% | |
| !! | GGAATCATCTAGTTTGTTAG+AGG | + | chr5_4:22509016-22509035 | None:intergenic | 35.0% |
| GGGTGATTAGTAGATAGATA+TGG | + | chr5_4:22509047-22509066 | None:intergenic | 35.0% | |
| CCAAAGAGGAAAATTAGAGA+AGG | + | chr5_4:22509133-22509152 | None:intergenic | 35.0% | |
| ! | CCTTCTCTAATTTTCCTCTT+TGG | - | chr5_4:22509130-22509149 | Msa0844200:intron | 35.0% |
| TGGGCTTACACATACATATA+TGG | - | chr5_4:22509179-22509198 | Msa0844200:intron | 35.0% | |
| ! | GAACAGGTTGACAGAATATA+GGG | - | chr5_4:22509235-22509254 | Msa0844200:intron | 35.0% |
| AGAATATAGGGATGCTCAAT+TGG | - | chr5_4:22509247-22509266 | Msa0844200:intron | 35.0% | |
| AACGAAGGAGAATCTATTCA+AGG | - | chr5_4:22509273-22509292 | Msa0844200:intron | 35.0% | |
| CAAGGCATAAAGATCATATC+AGG | - | chr5_4:22509291-22509310 | Msa0844200:intron | 35.0% | |
| AGGCATAAAGATCATATCAG+GGG | - | chr5_4:22509293-22509312 | Msa0844200:intron | 35.0% | |
| ! | CACTATCATGTTTGTTAGCT+TGG | + | chr5_4:22509320-22509339 | None:intergenic | 35.0% |
| GCTAAAGACTTCAGTTTGTA+GGG | + | chr5_4:22509384-22509403 | None:intergenic | 35.0% | |
| AGCTAAAGACTTCAGTTTGT+AGG | + | chr5_4:22509385-22509404 | None:intergenic | 35.0% | |
| AACTGAAGTCTTTAGCTAAG+CGG | - | chr5_4:22509388-22509407 | Msa0844200:intron | 35.0% | |
| !!! | GAACCTGAGTCTCTTTTTTA+TGG | - | chr5_4:22509419-22509438 | Msa0844200:intron | 35.0% |
| ! | TTTTTATGGCTGGCATTAAG+TGG | - | chr5_4:22509433-22509452 | Msa0844200:intron | 35.0% |
| CAACAATAATCCTGTCTTTC+AGG | - | chr5_4:22509505-22509524 | Msa0844200:intron | 35.0% | |
| AGCTAAATCTTTCTTCAGCA+AGG | + | chr5_4:22509534-22509553 | None:intergenic | 35.0% | |
| !!! | TAGTTGGTCTCTTTTTCAGT+TGG | - | chr5_4:22509727-22509746 | Msa0844200:intron | 35.0% |
| !! | TCAGTTGGTGAAATGAAAAG+TGG | - | chr5_4:22509742-22509761 | Msa0844200:intron | 35.0% |
| AAAAGTGGAGAGGTTATAGA+GGG | - | chr5_4:22509757-22509776 | Msa0844200:intron | 35.0% | |
| AGTTGAGAAAATCCAATTGG+AGG | - | chr5_4:22509798-22509817 | Msa0844200:intron | 35.0% | |
| AAATCCAATTGGAGGAGATT+AGG | - | chr5_4:22509806-22509825 | Msa0844200:intron | 35.0% | |
| TTCTGTTTGTTCGCTCAAAT+TGG | - | chr5_4:22509875-22509894 | Msa0844200:intron | 35.0% | |
| TCAAATTGGCACGAGAATTA+TGG | - | chr5_4:22509889-22509908 | Msa0844200:intron | 35.0% | |
| !! | CGAGAATTATGGATTAGAGT+CGG | - | chr5_4:22509900-22509919 | Msa0844200:intron | 35.0% |
| ! | AGTGATGCAATTTTCGTCTT+TGG | - | chr5_4:22510100-22510119 | Msa0844200:intron | 35.0% |
| TGGAAGAGAGTTACTAGATT+TGG | - | chr5_4:22510120-22510139 | Msa0844200:intron | 35.0% | |
| GGAAGAGAGTTACTAGATTT+GGG | - | chr5_4:22510121-22510140 | Msa0844200:intron | 35.0% | |
| ATTCAGTCAGAACTCAGAAT+GGG | + | chr5_4:22510150-22510169 | None:intergenic | 35.0% | |
| ! | GGAAACTGTTTAGAGTAATC+AGG | - | chr5_4:22510268-22510287 | Msa0844200:intron | 35.0% |
| TGGTTGTAAAATTACTGCCT+AGG | + | chr5_4:22510537-22510556 | None:intergenic | 35.0% | |
| ! | GCAGTAATTTTACAACCACT+TGG | - | chr5_4:22510539-22510558 | Msa0844200:intron | 35.0% |
| TTACAACCACTTGGAGATAA+AGG | - | chr5_4:22510548-22510567 | Msa0844200:intron | 35.0% | |
| ! | GTTCCTTGTTTAAAACTCAG+TGG | - | chr5_4:22510837-22510856 | Msa0844200:CDS | 35.0% |
| !!! | ATGCCACTGAGTTTTAAACA+AGG | + | chr5_4:22510843-22510862 | None:intergenic | 35.0% |
| AGTATCAACAAACATCAGAC+AGG | + | chr5_4:22511010-22511029 | None:intergenic | 35.0% | |
| ATCAGCCTCATCTCCAAAAA+CGG | - | chr5_4:22504450-22504469 | Msa0844200:three_prime_UTR | 40.0% | |
| CAACAAATTTCCATGGAAGC+GGG | - | chr5_4:22504495-22504514 | Msa0844200:CDS | 40.0% | |
| AGAAAGTGAGTTTGAGTGTG+GGG | + | chr5_4:22504549-22504568 | None:intergenic | 40.0% | |
| !!! | GTTTTGAAGTGCGATTCGAA+AGG | + | chr5_4:22504578-22504597 | None:intergenic | 40.0% |
| TCAGGTAGAAAATCGCGTTT+GGG | + | chr5_4:22504675-22504694 | None:intergenic | 40.0% | |
| ATCAGGTAGAAAATCGCGTT+TGG | + | chr5_4:22504676-22504695 | None:intergenic | 40.0% | |
| ! | AACGCGATTTTCTACCTGAT+TGG | - | chr5_4:22504676-22504695 | Msa0844200:intron | 40.0% |
| ! | ACGCGATTTTCTACCTGATT+GGG | - | chr5_4:22504677-22504696 | Msa0844200:intron | 40.0% |
| GATGGTTCGATTGAAGAGTA+CGG | + | chr5_4:22504766-22504785 | None:intergenic | 40.0% | |
| TGAGTAAAGGCCTTAATTCG+CGG | - | chr5_4:22504936-22504955 | Msa0844200:intron | 40.0% | |
| ATTACATGTCGGAGTCATGT+CGG | + | chr5_4:22505190-22505209 | None:intergenic | 40.0% | |
| GTTATGAAACATGGCATCCA+TGG | - | chr5_4:22505214-22505233 | Msa0844200:CDS | 40.0% | |
| ACCAGTGTCAGTATTTGTGT+CGG | - | chr5_4:22505412-22505431 | Msa0844200:intron | 40.0% | |
| CTCAAATTGAAGCTGTGGTT+AGG | - | chr5_4:22505553-22505572 | Msa0844200:intron | 40.0% | |
| TTGAAGCTGTGGTTAGGTAT+TGG | - | chr5_4:22505559-22505578 | Msa0844200:intron | 40.0% | |
| TGAAGCTGTGGTTAGGTATT+GGG | - | chr5_4:22505560-22505579 | Msa0844200:intron | 40.0% | |
| CAGCCAATCCTAAAGTTAAG+AGG | + | chr5_4:22505845-22505864 | None:intergenic | 40.0% | |
| !!! | GCTGTCACTAATATTTTGGC+TGG | - | chr5_4:22505861-22505880 | Msa0844200:intron | 40.0% |
| ! | GTTTTATGGAAAGCCAAACG+AGG | + | chr5_4:22505887-22505906 | None:intergenic | 40.0% |
| TATGCACGGCGAGATATAAT+TGG | - | chr5_4:22506375-22506394 | Msa0844200:intron | 40.0% | |
| GACTTAACGATGCCGATAAT+AGG | - | chr5_4:22506607-22506626 | Msa0844200:intron | 40.0% | |
| ! | TTTTGTCCAGGTAAATCCTC+AGG | - | chr5_4:22506635-22506654 | Msa0844200:intron | 40.0% |
| TTTGTCCAGGTAAATCCTCA+GGG | - | chr5_4:22506636-22506655 | Msa0844200:intron | 40.0% | |
| ! | TGTCCACTTGTTAGCTTACT+TGG | - | chr5_4:22506732-22506751 | Msa0844200:intron | 40.0% |
| ATGCCAAGTAAGCTAACAAG+TGG | + | chr5_4:22506738-22506757 | None:intergenic | 40.0% | |
| ! | ACAAGAAAGTACATGGCCAA+GGG | + | chr5_4:22506771-22506790 | None:intergenic | 40.0% |
| ! | AACAAGAAAGTACATGGCCA+AGG | + | chr5_4:22506772-22506791 | None:intergenic | 40.0% |
| GACACCGATAAATTGATGCA+AGG | - | chr5_4:22507251-22507270 | Msa0844200:intron | 40.0% | |
| GATGCAAGGATCAGTATATC+AGG | - | chr5_4:22507265-22507284 | Msa0844200:intron | 40.0% | |
| CGCAATACCTGAGTATTTGA+AGG | + | chr5_4:22507506-22507525 | None:intergenic | 40.0% | |
| TTGAGACAGATCCTTCTAGA+CGG | - | chr5_4:22507713-22507732 | Msa0844200:intron | 40.0% | |
| !! | CTCGCAAAGTTGTTTTGCAT+TGG | + | chr5_4:22507880-22507899 | None:intergenic | 40.0% |
| ! | AGCTGTAAAGGTCATCCTTT+TGG | + | chr5_4:22508031-22508050 | None:intergenic | 40.0% |
| GAAGTAGACCATGAGTAAGT+TGG | - | chr5_4:22508130-22508149 | Msa0844200:intron | 40.0% | |
| GAATTCCATAGCTCTCGATT+TGG | - | chr5_4:22508200-22508219 | Msa0844200:CDS | 40.0% | |
| GATTTCCAAATCGAGAGCTA+TGG | + | chr5_4:22508208-22508227 | None:intergenic | 40.0% | |
| ! | TCATATCAGGGGTGTGTATT+AGG | - | chr5_4:22508247-22508266 | Msa0844200:CDS | 40.0% |
| TATAAGATACTATCCCCGGA+TGG | - | chr5_4:22508328-22508347 | Msa0844200:CDS | 40.0% | |
| ATAACATATCAGATCGGCCA+TGG | + | chr5_4:22508376-22508395 | None:intergenic | 40.0% | |
| ATGGCTAATGCCTACGAAAT+AGG | + | chr5_4:22508481-22508500 | None:intergenic | 40.0% | |
| CATTGGCAATGAAAGGATGA+TGG | + | chr5_4:22508500-22508519 | None:intergenic | 40.0% | |
| GCTATGTCATTGGCAATGAA+AGG | + | chr5_4:22508507-22508526 | None:intergenic | 40.0% | |
| AAACATCGCAGCTATGTCAT+TGG | + | chr5_4:22508517-22508536 | None:intergenic | 40.0% | |
| ATGGAACAAGCAGTTTCTGA+TGG | - | chr5_4:22508597-22508616 | Msa0844200:intron | 40.0% | |
| AGGCAATAATGAACGCCAAT+CGG | + | chr5_4:22508630-22508649 | None:intergenic | 40.0% | |
| GTTGTCAGTTTGTAAGTGGT+AGG | + | chr5_4:22508650-22508669 | None:intergenic | 40.0% | |
| ACAAACTGACAACCATACAG+AGG | - | chr5_4:22508657-22508676 | Msa0844200:intron | 40.0% | |
| GGGAGATTTCCCAAAGTAAT+TGG | + | chr5_4:22508733-22508752 | None:intergenic | 40.0% | |
| ! | TTCGAGAAGTATGGAATGGT+CGG | + | chr5_4:22508805-22508824 | None:intergenic | 40.0% |
| ! | CCATTTCGAGAAGTATGGAA+TGG | + | chr5_4:22508809-22508828 | None:intergenic | 40.0% |
| CCATTCCATACTTCTCGAAA+TGG | - | chr5_4:22508806-22508825 | Msa0844200:CDS | 40.0% | |
| AAGTCCCATTTCGAGAAGTA+TGG | + | chr5_4:22508814-22508833 | None:intergenic | 40.0% | |
| TACTTCTCGAAATGGGACTT+AGG | - | chr5_4:22508814-22508833 | Msa0844200:intron | 40.0% | |
| TCAGAACATGATAGGGACTT+GGG | + | chr5_4:22508852-22508871 | None:intergenic | 40.0% | |
| ATCAGAACATGATAGGGACT+TGG | + | chr5_4:22508853-22508872 | None:intergenic | 40.0% | |
| GGTTCACATCAGAACATGAT+AGG | + | chr5_4:22508860-22508879 | None:intergenic | 40.0% | |
| ! | TTGTTAGAGGCAGAAAGCAT+TGG | + | chr5_4:22509003-22509022 | None:intergenic | 40.0% |
| ! | AGAAAGGCACAAATGGTAGT+GGG | + | chr5_4:22509084-22509103 | None:intergenic | 40.0% |
| GGATAGTTAGTTACAGGAGA+GGG | + | chr5_4:22509111-22509130 | None:intergenic | 40.0% | |
| GAGAAGGGATAGTTAGTTAC+AGG | + | chr5_4:22509117-22509136 | None:intergenic | 40.0% | |
| TACCTAACATGTTCCCTCTA+AGG | - | chr5_4:22509202-22509221 | Msa0844200:intron | 40.0% | |
| TACCTTAGAGGGAACATGTT+AGG | + | chr5_4:22509207-22509226 | None:intergenic | 40.0% | |
| !! | TGTTCCCTCTAAGGTAGAAT+AGG | - | chr5_4:22509211-22509230 | Msa0844200:intron | 40.0% |
| TTCGCCTATTCTACCTTAGA+GGG | + | chr5_4:22509218-22509237 | None:intergenic | 40.0% | |
| ! | CGAACAGGTTGACAGAATAT+AGG | - | chr5_4:22509234-22509253 | Msa0844200:intron | 40.0% |
| ATGCTCAATTGGACAAACGA+AGG | - | chr5_4:22509258-22509277 | Msa0844200:intron | 40.0% | |
| CAGCCATAAAAAAGAGACTC+AGG | + | chr5_4:22509425-22509444 | None:intergenic | 40.0% | |
| !!! | CTGAGTCTCTTTTTTATGGC+TGG | - | chr5_4:22509423-22509442 | Msa0844200:intron | 40.0% |
| CATTAAGTGGTTGAGAGACT+AGG | - | chr5_4:22509446-22509465 | Msa0844200:intron | 40.0% | |
| TTTCCATATGGTCCTACTAG+GGG | + | chr5_4:22509638-22509657 | None:intergenic | 40.0% | |
| GTTTCCATATGGTCCTACTA+GGG | + | chr5_4:22509639-22509658 | None:intergenic | 40.0% | |
| AGTTTCCATATGGTCCTACT+AGG | + | chr5_4:22509640-22509659 | None:intergenic | 40.0% | |
| ! | AACAGAATGCCGACTATAGT+TGG | - | chr5_4:22509711-22509730 | Msa0844200:intron | 40.0% |
| TGGTGAAATGAAAAGTGGAG+AGG | - | chr5_4:22509747-22509766 | Msa0844200:intron | 40.0% | |
| GAAAAGTGGAGAGGTTATAG+AGG | - | chr5_4:22509756-22509775 | Msa0844200:intron | 40.0% | |
| AAAGTGGAGAGGTTATAGAG+GGG | - | chr5_4:22509758-22509777 | Msa0844200:intron | 40.0% | |
| GATTCAGTCAGAACTCAGAA+TGG | + | chr5_4:22510151-22510170 | None:intergenic | 40.0% | |
| GAAAACAGAGCAGTTTCAAG+AGG | + | chr5_4:22510318-22510337 | None:intergenic | 40.0% | |
| !!! | CTTCCTCGGTTCTTTTTTCT+GGG | - | chr5_4:22510398-22510417 | Msa0844200:intron | 40.0% |
| !!! | TTCCTCGGTTCTTTTTTCTG+GGG | - | chr5_4:22510399-22510418 | Msa0844200:intron | 40.0% |
| GCAATTCCTTTATCTCCAAG+TGG | + | chr5_4:22510557-22510576 | None:intergenic | 40.0% | |
| AGGTTTCACTACTTCTGATC+AGG | - | chr5_4:22510601-22510620 | Msa0844200:intron | 40.0% | |
| GTATAACATGTAGGCTCGAA+AGG | + | chr5_4:22510681-22510700 | None:intergenic | 40.0% | |
| CAGTGGCATTCGTATATTTG+TGG | - | chr5_4:22510854-22510873 | Msa0844200:CDS | 40.0% | |
| CATGCCTGTATGCATTTCAA+TGG | + | chr5_4:22510893-22510912 | None:intergenic | 40.0% | |
| CATTGAAATGCATACAGGCA+TGG | - | chr5_4:22510891-22510910 | Msa0844200:CDS | 40.0% | |
| ! | CAGGCATGGATTACCTATAT+CGG | - | chr5_4:22510905-22510924 | Msa0844200:CDS | 40.0% |
| !! | GGTTTCCGTTTTTGGAGATG+AGG | + | chr5_4:22504458-22504477 | None:intergenic | 45.0% |
| GAAAGTGAGTTTGAGTGTGG+GGG | + | chr5_4:22504548-22504567 | None:intergenic | 45.0% | |
| ! | AAAATCGCGTTTGGGGTTTG+GGG | + | chr5_4:22504667-22504686 | None:intergenic | 45.0% |
| ! | GAAAATCGCGTTTGGGGTTT+GGG | + | chr5_4:22504668-22504687 | None:intergenic | 45.0% |
| ! | AGAAAATCGCGTTTGGGGTT+TGG | + | chr5_4:22504669-22504688 | None:intergenic | 45.0% |
| CAGGTAGAAAATCGCGTTTG+GGG | + | chr5_4:22504674-22504693 | None:intergenic | 45.0% | |
| !!! | TCGTTTTGAGAGACCCAATC+AGG | + | chr5_4:22504693-22504712 | None:intergenic | 45.0% |
| CTCTTCAATCGAACCATCTC+CGG | - | chr5_4:22504768-22504787 | Msa0844200:intron | 45.0% | |
| GAGAGAAAATGAGAACCTGC+CGG | + | chr5_4:22504814-22504833 | None:intergenic | 45.0% | |
| TGTCAGTCTCACGAATGCTT+TGG | - | chr5_4:22505059-22505078 | Msa0844200:CDS | 45.0% | |
| ACCGACACAAATACTGACAC+TGG | + | chr5_4:22505416-22505435 | None:intergenic | 45.0% | |
| !! | CACATGTGTAGGTGTTGAGT+CGG | + | chr5_4:22505451-22505470 | None:intergenic | 45.0% |
| CGAGCAGACCTCTTAACTTT+AGG | - | chr5_4:22505834-22505853 | Msa0844200:intron | 45.0% | |
| !!! | ATATTTTGGCTGGCCTCGTT+TGG | - | chr5_4:22505871-22505890 | Msa0844200:intron | 45.0% |
| ! | TCTTAGTTGTGTCGATGCCT+TGG | - | chr5_4:22506011-22506030 | Msa0844200:intron | 45.0% |
| TTCTTGCATTCAACTCCCTG+AGG | + | chr5_4:22506654-22506673 | None:intergenic | 45.0% | |
| AAAGTACATGGCCAAGGGAT+GGG | + | chr5_4:22506766-22506785 | None:intergenic | 45.0% | |
| AAGAGGGATAAGTTGTGGCT+TGG | - | chr5_4:22506898-22506917 | Msa0844200:CDS | 45.0% | |
| AATAACAAGTGATCGGCAGC+AGG | + | chr5_4:22507153-22507172 | None:intergenic | 45.0% | |
| TTTGCTGCAGAATCTTCTCC+TGG | - | chr5_4:22507206-22507225 | Msa0844200:intron | 45.0% | |
| TTGCTGCAGAATCTTCTCCT+GGG | - | chr5_4:22507207-22507226 | Msa0844200:intron | 45.0% | |
| GCTACTATAGTGCACTCATG+TGG | - | chr5_4:22507360-22507379 | Msa0844200:intron | 45.0% | |
| GCTTCTAATCTTGGAAGTCC+TGG | - | chr5_4:22507669-22507688 | Msa0844200:intron | 45.0% | |
| TGAGACAGATCCTTCTAGAC+GGG | - | chr5_4:22507714-22507733 | Msa0844200:intron | 45.0% | |
| TGTACTGAAGTACGAAGGAC+TGG | - | chr5_4:22508056-22508075 | Msa0844200:intron | 45.0% | |
| CTGGAGCGAGGAAATTGTTA+AGG | - | chr5_4:22508075-22508094 | Msa0844200:intron | 45.0% | |
| ! | ATCAGGGGTGTGTATTAGGA+AGG | - | chr5_4:22508251-22508270 | Msa0844200:CDS | 45.0% |
| AAAGGCTGAAGCTTACCATC+CGG | + | chr5_4:22508346-22508365 | None:intergenic | 45.0% | |
| TTCAGCCTTTGCGTATTCCA+TGG | - | chr5_4:22508356-22508375 | Msa0844200:intron | 45.0% | |
| AACAAGCAGTTTCTGATGGC+AGG | - | chr5_4:22508601-22508620 | Msa0844200:intron | 45.0% | |
| GGCAATAATGAACGCCAATC+GGG | + | chr5_4:22508629-22508648 | None:intergenic | 45.0% | |
| AACTGACAACCATACAGAGG+TGG | - | chr5_4:22508660-22508679 | Msa0844200:intron | 45.0% | |
| ATTGACTGACCACCTCTGTA+TGG | + | chr5_4:22508672-22508691 | None:intergenic | 45.0% | |
| ATAGGGACTTGGGTATCATG+AGG | + | chr5_4:22508842-22508861 | None:intergenic | 45.0% | |
| CTGAGGAGCTTAGCTCAAAT+GGG | + | chr5_4:22508976-22508995 | None:intergenic | 45.0% | |
| TCTGAGGAGCTTAGCTCAAA+TGG | + | chr5_4:22508977-22508996 | None:intergenic | 45.0% | |
| !! | CAGAAAGCATTGGTTCTCTG+AGG | + | chr5_4:22508993-22509012 | None:intergenic | 45.0% |
| ! | GAGAAAGGCACAAATGGTAG+TGG | + | chr5_4:22509085-22509104 | None:intergenic | 45.0% |
| GGGATAGTTAGTTACAGGAG+AGG | + | chr5_4:22509112-22509131 | None:intergenic | 45.0% | |
| TGTGTAAGCCCAATTGTCCT+AGG | + | chr5_4:22509171-22509190 | None:intergenic | 45.0% | |
| GTTCGCCTATTCTACCTTAG+AGG | + | chr5_4:22509219-22509238 | None:intergenic | 45.0% | |
| CTAAGGTAGAATAGGCGAAC+AGG | - | chr5_4:22509219-22509238 | Msa0844200:intron | 45.0% | |
| AGCAAGGATACCTGAAAGAC+AGG | + | chr5_4:22509518-22509537 | None:intergenic | 45.0% | |
| TACATAGGAGGGAATCGTTG+GGG | + | chr5_4:22509569-22509588 | None:intergenic | 45.0% | |
| CTACATAGGAGGGAATCGTT+GGG | + | chr5_4:22509570-22509589 | None:intergenic | 45.0% | |
| ACTCATCAGGCTACATAGGA+GGG | + | chr5_4:22509580-22509599 | None:intergenic | 45.0% | |
| AATCCCCTAGTAGGACCATA+TGG | - | chr5_4:22509632-22509651 | Msa0844200:intron | 45.0% | |
| TGCCAGACTGCAAGAATACT+TGG | - | chr5_4:22509687-22509706 | Msa0844200:intron | 45.0% | |
| GCCAGACTGCAAGAATACTT+GGG | - | chr5_4:22509688-22509707 | Msa0844200:intron | 45.0% | |
| TCCCAAGTATTCTTGCAGTC+TGG | + | chr5_4:22509692-22509711 | None:intergenic | 45.0% | |
| AAGTGGAGAGGTTATAGAGG+GGG | - | chr5_4:22509759-22509778 | Msa0844200:intron | 45.0% | |
| CCAGGTGTACAAGATTACGA+GGG | + | chr5_4:22509833-22509852 | None:intergenic | 45.0% | |
| TCCAGGTGTACAAGATTACG+AGG | + | chr5_4:22509834-22509853 | None:intergenic | 45.0% | |
| !! | AGGAGAAACAGTTTTTGGGG+TGG | - | chr5_4:22510192-22510211 | Msa0844200:intron | 45.0% |
| !!! | GGAGAAACAGTTTTTGGGGT+GGG | - | chr5_4:22510193-22510212 | Msa0844200:intron | 45.0% |
| !!! | GAGAAACAGTTTTTGGGGTG+GGG | - | chr5_4:22510194-22510213 | Msa0844200:intron | 45.0% |
| ! | TTTCAAGAGGTCTGGGACAA+GGG | + | chr5_4:22510305-22510324 | None:intergenic | 45.0% |
| AGAGCAGTTTCAAGAGGTCT+GGG | + | chr5_4:22510312-22510331 | None:intergenic | 45.0% | |
| GTAGCCTTCTATTCCTTCCT+CGG | - | chr5_4:22510384-22510403 | Msa0844200:intron | 45.0% | |
| AGAACCGAGGAAGGAATAGA+AGG | + | chr5_4:22510391-22510410 | None:intergenic | 45.0% | |
| CCAGAAAAAAGAACCGAGGA+AGG | + | chr5_4:22510400-22510419 | None:intergenic | 45.0% | |
| !!! | CCTTCCTCGGTTCTTTTTTC+TGG | - | chr5_4:22510397-22510416 | Msa0844200:intron | 45.0% |
| !!! | TTCTTTTTTCTGGGGTGAGG+CGG | - | chr5_4:22510407-22510426 | Msa0844200:intron | 45.0% |
| !! | ATTGGTGGTGACACAATTCG+AGG | - | chr5_4:22510581-22510600 | Msa0844200:intron | 45.0% |
| TACCTATATCGGAGAGAAGC+TGG | - | chr5_4:22510916-22510935 | Msa0844200:CDS | 45.0% | |
| ATCCAGCTTCTCTCCGATAT+AGG | + | chr5_4:22510921-22510940 | None:intergenic | 45.0% | |
| AAACGGCACCAACGTAGATC+GGG | + | chr5_4:22504734-22504753 | None:intergenic | 50.0% | |
| GAAACGGCACCAACGTAGAT+CGG | + | chr5_4:22504735-22504754 | None:intergenic | 50.0% | |
| GAGTACGGCGAAGAGAGAAA+CGG | + | chr5_4:22504751-22504770 | None:intergenic | 50.0% | |
| AAATGAGAACCTGCCGGCAT+CGG | + | chr5_4:22504808-22504827 | None:intergenic | 50.0% | |
| !! | CAGAAGTGTCGATGCTACAG+AGG | + | chr5_4:22505152-22505171 | None:intergenic | 50.0% |
| CAATGTCTGACACGGATACG+TGG | + | chr5_4:22505651-22505670 | None:intergenic | 50.0% | |
| ACCAAACACAGAGCAAGCCA+AGG | + | chr5_4:22506031-22506050 | None:intergenic | 50.0% | |
| CAACTCCCTGAGGATTTACC+TGG | + | chr5_4:22506644-22506663 | None:intergenic | 50.0% | |
| ! | TGGCATTTTTCCCCATCCCT+TGG | - | chr5_4:22506752-22506771 | Msa0844200:intron | 50.0% |
| AAGTACATGGCCAAGGGATG+GGG | + | chr5_4:22506765-22506784 | None:intergenic | 50.0% | |
| ! | GAAAGTACATGGCCAAGGGA+TGG | + | chr5_4:22506767-22506786 | None:intergenic | 50.0% |
| ! | AGGGATAAGTTGTGGCTTGG+AGG | - | chr5_4:22506901-22506920 | Msa0844200:CDS | 50.0% |
| GCAGAATCTTCTCCTGGGAA+TGG | - | chr5_4:22507212-22507231 | Msa0844200:intron | 50.0% | |
| AGATCCTTCTAGACGGGTCA+GGG | - | chr5_4:22507720-22507739 | Msa0844200:intron | 50.0% | |
| TCAGGGAATGAAAACAGGGC+TGG | - | chr5_4:22507994-22508013 | Msa0844200:intron | 50.0% | |
| ! | CTGGTGATGCTCTCTCCAAA+AGG | - | chr5_4:22508013-22508032 | Msa0844200:intron | 50.0% |
| AAGGCTGAAGCTTACCATCC+GGG | + | chr5_4:22508345-22508364 | None:intergenic | 50.0% | |
| ATCGGCCATGGAATACGCAA+AGG | + | chr5_4:22508364-22508383 | None:intergenic | 50.0% | |
| ATCTGGTCTCTCTGGCACAA+TGG | + | chr5_4:22508562-22508581 | None:intergenic | 50.0% | |
| ! | GAGAAGTATGGAATGGTCGG+TGG | + | chr5_4:22508802-22508821 | None:intergenic | 50.0% |
| ! | GGGTGAGAGAAAGGCACAAA+TGG | + | chr5_4:22509091-22509110 | None:intergenic | 50.0% |
| TACAGGAGAGGGTGAGAGAA+AGG | + | chr5_4:22509100-22509119 | None:intergenic | 50.0% | |
| CTCTTTGGACGACTCCAAGT+GGG | - | chr5_4:22509145-22509164 | Msa0844200:intron | 50.0% | |
| CAAGTGGGCCTAGGACAATT+GGG | - | chr5_4:22509160-22509179 | Msa0844200:intron | 50.0% | |
| AATCGTTGGGGACATGCTTG+AGG | + | chr5_4:22509557-22509576 | None:intergenic | 50.0% | |
| GCTACATAGGAGGGAATCGT+TGG | + | chr5_4:22509571-22509590 | None:intergenic | 50.0% | |
| CACTCATCAGGCTACATAGG+AGG | + | chr5_4:22509581-22509600 | None:intergenic | 50.0% | |
| TCGCACTCATCAGGCTACAT+AGG | + | chr5_4:22509584-22509603 | None:intergenic | 50.0% | |
| GGGACCTAATCTCCTCCAAT+TGG | + | chr5_4:22509813-22509832 | None:intergenic | 50.0% | |
| CCCTCGTAATCTTGTACACC+TGG | - | chr5_4:22509830-22509849 | Msa0844200:intron | 50.0% | |
| !!! | AACAGTTTTTGGGGTGGGGT+TGG | - | chr5_4:22510198-22510217 | Msa0844200:intron | 50.0% |
| !!! | ACAGTTTTTGGGGTGGGGTT+GGG | - | chr5_4:22510199-22510218 | Msa0844200:intron | 50.0% |
| ! | GTTTCAAGAGGTCTGGGACA+AGG | + | chr5_4:22510306-22510325 | None:intergenic | 50.0% |
| CAGAGCAGTTTCAAGAGGTC+TGG | + | chr5_4:22510313-22510332 | None:intergenic | 50.0% | |
| CACCCCAGAAAAAAGAACCG+AGG | + | chr5_4:22510404-22510423 | None:intergenic | 50.0% | |
| !!! | CGGTTCTTTTTTCTGGGGTG+AGG | - | chr5_4:22510404-22510423 | Msa0844200:intron | 50.0% |
| !!! | TCTTTTTTCTGGGGTGAGGC+GGG | - | chr5_4:22510408-22510427 | Msa0844200:intron | 50.0% |
| !!! | TGAGGCGGGTTGGTTCTTTT+TGG | - | chr5_4:22510422-22510441 | Msa0844200:intron | 50.0% |
| !!! | GAGGCGGGTTGGTTCTTTTT+GGG | - | chr5_4:22510423-22510442 | Msa0844200:intron | 50.0% |
| !! | GCCTTGGCTTGCTCTGTGTT+TGG | - | chr5_4:22506027-22506046 | Msa0844200:intron | 55.0% |
| ATCTTCTCCTGGGAATGGCG+AGG | - | chr5_4:22507217-22507236 | Msa0844200:intron | 55.0% | |
| AATGGCAGCTCAGACTTCCC+AGG | + | chr5_4:22507479-22507498 | None:intergenic | 55.0% | |
| CAGATCCTTCTAGACGGGTC+AGG | - | chr5_4:22507719-22507738 | Msa0844200:intron | 55.0% | |
| AAAGCCCTGACCCGTCTAGA+AGG | + | chr5_4:22507727-22507746 | None:intergenic | 55.0% | |
| AAGTACGAAGGACTGGAGCG+AGG | - | chr5_4:22508063-22508082 | Msa0844200:intron | 55.0% | |
| AGGCTGAAGCTTACCATCCG+GGG | + | chr5_4:22508344-22508363 | None:intergenic | 55.0% | |
| TGGACGGTTAGAGAAGGCAG+AGG | - | chr5_4:22508410-22508429 | Msa0844200:intron | 55.0% | |
| GGACGGTTAGAGAAGGCAGA+GGG | - | chr5_4:22508411-22508430 | Msa0844200:intron | 55.0% | |
| TCTGATGGCAGGTACCCGAT+TGG | - | chr5_4:22508612-22508631 | Msa0844200:intron | 55.0% | |
| CCACTTGGAGTCGTCCAAAG+AGG | + | chr5_4:22509147-22509166 | None:intergenic | 55.0% | |
| CCTCTTTGGACGACTCCAAG+TGG | - | chr5_4:22509144-22509163 | Msa0844200:intron | 55.0% | |
| CCAATTGTCCTAGGCCCACT+TGG | + | chr5_4:22509162-22509181 | None:intergenic | 55.0% | |
| CCAAGTGGGCCTAGGACAAT+TGG | - | chr5_4:22509159-22509178 | Msa0844200:intron | 55.0% | |
| ACCACTAGCTCGCACTCATC+AGG | + | chr5_4:22509593-22509612 | None:intergenic | 55.0% | |
| ! | CTGGTGTCGAATCCCCTAGT+AGG | - | chr5_4:22509623-22509642 | Msa0844200:CDS | 55.0% |
| TGGAGAGGTTATAGAGGGGG+TGG | - | chr5_4:22509762-22509781 | Msa0844200:intron | 55.0% | |
| GGAGAGGTTATAGAGGGGGT+GGG | - | chr5_4:22509763-22509782 | Msa0844200:intron | 55.0% | |
| GAGAGGTTATAGAGGGGGTG+GGG | - | chr5_4:22509764-22509783 | Msa0844200:intron | 55.0% | |
| AGAGGTTATAGAGGGGGTGG+GGG | - | chr5_4:22509765-22509784 | Msa0844200:intron | 55.0% | |
| !!! | CAGTTTTTGGGGTGGGGTTG+GGG | - | chr5_4:22510200-22510219 | Msa0844200:intron | 55.0% |
| !!! | AGTTTTTGGGGTGGGGTTGG+GGG | - | chr5_4:22510201-22510220 | Msa0844200:intron | 55.0% |
| GGGGGAGAGTGAAGTGGACA+CGG | + | chr5_4:22504530-22504549 | None:intergenic | 60.0% | |
| GAGTGTGGGGGAGAGTGAAG+TGG | + | chr5_4:22504536-22504555 | None:intergenic | 60.0% | |
| ! | CGCGTTTGGGGTTTGGGGTT+CGG | + | chr5_4:22504662-22504681 | None:intergenic | 60.0% |
| GCACCAACGTAGATCGGGAG+GGG | + | chr5_4:22504729-22504748 | None:intergenic | 60.0% | |
| GGCACCAACGTAGATCGGGA+GGG | + | chr5_4:22504730-22504749 | None:intergenic | 60.0% | |
| TCTCCCTGACGTTGCGCGTA+CGG | - | chr5_4:22506686-22506705 | Msa0844200:intron | 60.0% | |
| GAATGGCGAGGCTGTGAGTG+TGG | - | chr5_4:22507229-22507248 | Msa0844200:intron | 60.0% | |
| ACGGGTCAGGGCTTTCTGCA+AGG | - | chr5_4:22507732-22507751 | Msa0844200:intron | 60.0% | |
| GGTCAGGGCTTTCTGCAAGG+AGG | - | chr5_4:22507735-22507754 | Msa0844200:intron | 60.0% | |
| GCCTGATGAGTGCGAGCTAG+TGG | - | chr5_4:22509589-22509608 | Msa0844200:CDS | 60.0% | |
| GCTAGTGGTGCAACCTGAGC+TGG | - | chr5_4:22509604-22509623 | Msa0844200:CDS | 60.0% | |
| AGGGGATTCGACACCAGCTC+AGG | + | chr5_4:22509620-22509639 | None:intergenic | 60.0% | |
| GAGGTTATAGAGGGGGTGGG+GGG | - | chr5_4:22509766-22509785 | Msa0844200:intron | 60.0% | |
| !!! | TTTTCTGGGGTGAGGCGGGT+TGG | - | chr5_4:22510412-22510431 | Msa0844200:intron | 60.0% |
| GAGCGCAGTTCCCGCTTCCA+TGG | + | chr5_4:22504508-22504527 | None:intergenic | 65.0% | |
| CGACCCCTCCCGATCTACGT+TGG | - | chr5_4:22504723-22504742 | Msa0844200:intron | 65.0% | |
| CGGCACCAACGTAGATCGGG+AGG | + | chr5_4:22504731-22504750 | None:intergenic | 65.0% | |
| GACGGGAGCAATGCCGGAGA+TGG | + | chr5_4:22504784-22504803 | None:intergenic | 65.0% | |
| ATCGGCGACGGGAGCAATGC+CGG | + | chr5_4:22504790-22504809 | None:intergenic | 65.0% | |
| ATTGCTCCCGTCGCCGATGC+CGG | - | chr5_4:22504792-22504811 | Msa0844200:intron | 65.0% | |
| GCTCCGTACGCGCAACGTCA+GGG | + | chr5_4:22506692-22506711 | None:intergenic | 65.0% | |
| AGCTCCGTACGCGCAACGTC+AGG | + | chr5_4:22506693-22506712 | None:intergenic | 65.0% | |
| TTGCGCGTACGGAGCTGCTC+TGG | - | chr5_4:22506697-22506716 | Msa0844200:intron | 65.0% | |
| CTCACAGCCTCGCCATTCCC+AGG | + | chr5_4:22507227-22507246 | None:intergenic | 65.0% | |
| GGACGACTCCAAGTGGGCCT+AGG | - | chr5_4:22509151-22509170 | Msa0844200:intron | 65.0% | |
| !! | AACCTGCCGGCATCGGCGAC+GGG | + | chr5_4:22504801-22504820 | None:intergenic | 70.0% |
| !! | GAACCTGCCGGCATCGGCGA+CGG | + | chr5_4:22504802-22504821 | None:intergenic | 70.0% |
| ! | CTCCCGTCGCCGATGCCGGC+AGG | - | chr5_4:22504796-22504815 | Msa0844200:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 22504321 | 22511152 | 22504321 | ID=Msa0844200;Name=Msa0844200 |
| chr5_4 | mRNA | 22504321 | 22511152 | 22504321 | ID=Msa0844200-mRNA-1;Parent=Msa0844200;Name=Msa0844200-mRNA-1;_AED=0.21;_eAED=0.23;_QI=186|0.5|0.66|1|1|1|9|167|375 |
| chr5_4 | exon | 22504321 | 22504565 | 22504321 | ID=Msa0844200-mRNA-1:exon:9227;Parent=Msa0844200-mRNA-1 |
| chr5_4 | exon | 22504851 | 22504934 | 22504851 | ID=Msa0844200-mRNA-1:exon:9226;Parent=Msa0844200-mRNA-1 |
| chr5_4 | exon | 22505023 | 22505085 | 22505023 | ID=Msa0844200-mRNA-1:exon:9225;Parent=Msa0844200-mRNA-1 |
| chr5_4 | exon | 22505192 | 22505291 | 22505192 | ID=Msa0844200-mRNA-1:exon:9224;Parent=Msa0844200-mRNA-1 |
| chr5_4 | exon | 22506851 | 22506983 | 22506851 | ID=Msa0844200-mRNA-1:exon:9223;Parent=Msa0844200-mRNA-1 |
| chr5_4 | exon | 22508165 | 22508349 | 22508165 | ID=Msa0844200-mRNA-1:exon:9222;Parent=Msa0844200-mRNA-1 |
| chr5_4 | exon | 22508755 | 22508828 | 22508755 | ID=Msa0844200-mRNA-1:exon:9221;Parent=Msa0844200-mRNA-1 |
| chr5_4 | exon | 22509550 | 22509649 | 22509550 | ID=Msa0844200-mRNA-1:exon:9220;Parent=Msa0844200-mRNA-1 |
| chr5_4 | exon | 22510656 | 22511152 | 22510656 | ID=Msa0844200-mRNA-1:exon:9219;Parent=Msa0844200-mRNA-1 |
| chr5_4 | five_prime_UTR | 22510967 | 22511152 | 22510967 | ID=Msa0844200-mRNA-1:five_prime_utr;Parent=Msa0844200-mRNA-1 |
| chr5_4 | CDS | 22510656 | 22510966 | 22510656 | ID=Msa0844200-mRNA-1:cds;Parent=Msa0844200-mRNA-1 |
| chr5_4 | CDS | 22509550 | 22509649 | 22509550 | ID=Msa0844200-mRNA-1:cds;Parent=Msa0844200-mRNA-1 |
| chr5_4 | CDS | 22508755 | 22508828 | 22508755 | ID=Msa0844200-mRNA-1:cds;Parent=Msa0844200-mRNA-1 |
| chr5_4 | CDS | 22508165 | 22508349 | 22508165 | ID=Msa0844200-mRNA-1:cds;Parent=Msa0844200-mRNA-1 |
| chr5_4 | CDS | 22506851 | 22506983 | 22506851 | ID=Msa0844200-mRNA-1:cds;Parent=Msa0844200-mRNA-1 |
| chr5_4 | CDS | 22505192 | 22505291 | 22505192 | ID=Msa0844200-mRNA-1:cds;Parent=Msa0844200-mRNA-1 |
| chr5_4 | CDS | 22505023 | 22505085 | 22505023 | ID=Msa0844200-mRNA-1:cds;Parent=Msa0844200-mRNA-1 |
| chr5_4 | CDS | 22504851 | 22504934 | 22504851 | ID=Msa0844200-mRNA-1:cds;Parent=Msa0844200-mRNA-1 |
| chr5_4 | CDS | 22504488 | 22504565 | 22504488 | ID=Msa0844200-mRNA-1:cds;Parent=Msa0844200-mRNA-1 |
| chr5_4 | three_prime_UTR | 22504321 | 22504487 | 22504321 | ID=Msa0844200-mRNA-1:three_prime_utr;Parent=Msa0844200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
