Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092920 | XP_003603178.2 | 94.134 | 358 | 8 | 1 | 1 | 345 | 1 | 358 | 0.0 | 696 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092920 | sp|Q5C9L6|CNMT_THLFG | 51.045 | 335 | 147 | 3 | 28 | 345 | 27 | 361 | 1.30e-121 | 357 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092920 | I3S3W0 | 94.134 | 358 | 8 | 1 | 1 | 345 | 1 | 358 | 0.0 | 696 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001460 | Msa0092920 | 0.805877 | 1.079462e-49 | -8.615850e-47 |
Msa0001950 | Msa0092920 | 0.832073 | 1.163955e-55 | -8.615850e-47 |
Msa0003470 | Msa0092920 | 0.820847 | 5.526126e-53 | -8.615850e-47 |
Msa0007450 | Msa0092920 | 0.801960 | 7.034528e-49 | -8.615850e-47 |
Msa0012460 | Msa0092920 | 0.828952 | 6.752171e-55 | -8.615850e-47 |
Msa0017120 | Msa0092920 | 0.854754 | 9.973120e-62 | -8.615850e-47 |
Msa0017940 | Msa0092920 | 0.818544 | 1.854887e-52 | -8.615850e-47 |
Msa0024680 | Msa0092920 | 0.803433 | 3.495094e-49 | -8.615850e-47 |
Msa0027540 | Msa0092920 | 0.810877 | 9.261946e-51 | -8.615850e-47 |
Msa0030310 | Msa0092920 | 0.818771 | 1.647099e-52 | -8.615850e-47 |
Msa0030730 | Msa0092920 | 0.825365 | 4.877484e-54 | -8.615850e-47 |
Msa0032120 | Msa0092920 | 0.816031 | 6.818476e-52 | -8.615850e-47 |
Msa0032400 | Msa0092920 | 0.823398 | 1.415480e-53 | -8.615850e-47 |
Msa0034320 | Msa0092920 | 0.815937 | 7.157690e-52 | -8.615850e-47 |
Msa0041540 | Msa0092920 | 0.804743 | 1.865628e-49 | -8.615850e-47 |
Msa0043680 | Msa0092920 | 0.818282 | 2.126529e-52 | -8.615850e-47 |
Msa0044220 | Msa0092920 | 0.818933 | 1.513441e-52 | -8.615850e-47 |
Msa0048020 | Msa0092920 | 0.835581 | 1.544218e-56 | -8.615850e-47 |
Msa0049990 | Msa0092920 | 0.818690 | 1.718599e-52 | -8.615850e-47 |
Msa0050580 | Msa0092920 | 0.820548 | 6.473263e-53 | -8.615850e-47 |
Msa0056040 | Msa0092920 | 0.803755 | 2.996681e-49 | -8.615850e-47 |
Msa0060350 | Msa0092920 | 0.843802 | 1.119778e-58 | -8.615850e-47 |
Msa0065390 | Msa0092920 | 0.844443 | 7.535928e-59 | -8.615850e-47 |
Msa0073820 | Msa0092920 | 0.803656 | 3.141815e-49 | -8.615850e-47 |
Msa0078090 | Msa0092920 | 0.833145 | 6.308370e-56 | -8.615850e-47 |
Msa0079250 | Msa0092920 | 0.818045 | 2.405377e-52 | -8.615850e-47 |
Msa0082820 | Msa0092920 | 0.839689 | 1.363649e-57 | -8.615850e-47 |
Msa0084680 | Msa0092920 | 0.822114 | 2.816687e-53 | -8.615850e-47 |
Msa0089210 | Msa0092920 | 0.822118 | 2.810265e-53 | -8.615850e-47 |
Msa0091480 | Msa0092920 | 0.800639 | 1.311435e-48 | -8.615850e-47 |
Msa0091550 | Msa0092920 | 0.809234 | 2.092915e-50 | -8.615850e-47 |
Msa0092180 | Msa0092920 | 0.841023 | 6.110892e-58 | -8.615850e-47 |
Msa0092660 | Msa0092920 | 0.841788 | 3.841494e-58 | -8.615850e-47 |
Msa0092680 | Msa0092920 | 0.807323 | 5.345904e-50 | -8.615850e-47 |
Msa0092730 | Msa0092920 | 0.847026 | 1.499794e-59 | -8.615850e-47 |
Msa0092920 | Msa0105210 | 0.807921 | 3.990151e-50 | -8.615850e-47 |
Msa0092920 | Msa0110710 | 0.846090 | 2.702130e-59 | -8.615850e-47 |
Msa0092920 | Msa0112290 | 0.834990 | 2.177367e-56 | -8.615850e-47 |
Msa0092920 | Msa0125800 | 0.809880 | 1.520495e-50 | -8.615850e-47 |
Msa0092920 | Msa0130800 | 0.809508 | 1.827674e-50 | -8.615850e-47 |
Msa0092920 | Msa0135980 | 0.859573 | 3.767729e-63 | -8.615850e-47 |
Msa0092920 | Msa0137600 | 0.846864 | 1.661531e-59 | -8.615850e-47 |
Msa0092920 | Msa0139050 | 0.803953 | 2.726090e-49 | -8.615850e-47 |
Msa0092920 | Msa0141430 | 0.834583 | 2.756213e-56 | -8.615850e-47 |
Msa0092920 | Msa0141830 | 0.817714 | 2.857842e-52 | -8.615850e-47 |
Msa0092920 | Msa0143970 | 0.847951 | 8.355506e-60 | -8.615850e-47 |
Msa0092920 | Msa0143980 | 0.840201 | 1.002571e-57 | -8.615850e-47 |
Msa0092920 | Msa0144340 | 0.819456 | 1.150646e-52 | -8.615850e-47 |
Msa0092920 | Msa0146470 | 0.813612 | 2.343976e-51 | -8.615850e-47 |
Msa0092920 | Msa0152380 | 0.828218 | 1.016005e-54 | -8.615850e-47 |
Msa0092920 | Msa0157020 | 0.843992 | 9.962976e-59 | -8.615850e-47 |
Msa0092920 | Msa0157350 | 0.850386 | 1.755854e-60 | -8.615850e-47 |
Msa0092920 | Msa0162030 | 0.801999 | 6.906461e-49 | -8.615850e-47 |
Msa0092920 | Msa0170440 | 0.800128 | 1.666592e-48 | -8.615850e-47 |
Msa0092920 | Msa0171780 | 0.804424 | 2.174758e-49 | -8.615850e-47 |
Msa0092920 | Msa0173610 | 0.818854 | 1.577597e-52 | -8.615850e-47 |
Msa0092920 | Msa0175280 | 0.838976 | 2.088453e-57 | -8.615850e-47 |
Msa0092920 | Msa0177280 | 0.847871 | 8.787092e-60 | -8.615850e-47 |
Msa0092920 | Msa0181010 | 0.818110 | 2.325125e-52 | -8.615850e-47 |
Msa0092920 | Msa0181020 | 0.813831 | 2.097864e-51 | -8.615850e-47 |
Msa0092920 | Msa0182270 | 0.819634 | 1.047589e-52 | -8.615850e-47 |
Msa0092920 | Msa0183610 | 0.846633 | 1.920945e-59 | -8.615850e-47 |
Msa0092920 | Msa0183620 | 0.830919 | 2.238795e-55 | -8.615850e-47 |
Msa0092920 | Msa0185390 | 0.824145 | 9.460892e-54 | -8.615850e-47 |
Msa0092920 | Msa0185700 | 0.828861 | 7.103451e-55 | -8.615850e-47 |
Msa0092920 | Msa0197900 | 0.825732 | 3.992309e-54 | -8.615850e-47 |
Msa0092920 | Msa0206940 | 0.830952 | 2.197761e-55 | -8.615850e-47 |
Msa0092920 | Msa0207000 | 0.851140 | 1.077514e-60 | -8.615850e-47 |
Msa0092920 | Msa0213080 | 0.802912 | 4.478681e-49 | -8.615850e-47 |
Msa0092920 | Msa0217470 | 0.813877 | 2.049426e-51 | -8.615850e-47 |
Msa0092920 | Msa0222070 | 0.811050 | 8.496429e-51 | -8.615850e-47 |
Msa0092920 | Msa0222120 | 0.810399 | 1.175253e-50 | -8.615850e-47 |
Msa0092920 | Msa0223280 | 0.817958 | 2.517145e-52 | -8.615850e-47 |
Msa0092920 | Msa0223390 | 0.846128 | 2.638727e-59 | -8.615850e-47 |
Msa0092920 | Msa0225010 | 0.802080 | 6.647164e-49 | -8.615850e-47 |
Msa0092920 | Msa0239660 | 0.832710 | 8.094194e-56 | -8.615850e-47 |
Msa0092920 | Msa0246690 | 0.805442 | 1.332392e-49 | -8.615850e-47 |
Msa0092920 | Msa0247310 | 0.814980 | 1.168508e-51 | -8.615850e-47 |
Msa0092920 | Msa0255990 | 0.806209 | 9.194291e-50 | -8.615850e-47 |
Msa0092920 | Msa0257310 | 0.822823 | 1.927270e-53 | -8.615850e-47 |
Msa0092920 | Msa0259980 | 0.827150 | 1.834129e-54 | -8.615850e-47 |
Msa0092920 | Msa0263620 | 0.810564 | 1.082816e-50 | -8.615850e-47 |
Msa0092920 | Msa0269830 | 0.814864 | 1.240004e-51 | -8.615850e-47 |
Msa0092920 | Msa0277640 | 0.829005 | 6.556949e-55 | -8.615850e-47 |
Msa0092920 | Msa0280140 | 0.840748 | 7.213239e-58 | -8.615850e-47 |
Msa0092920 | Msa0285740 | 0.833582 | 4.910445e-56 | -8.615850e-47 |
Msa0092920 | Msa0296000 | 0.806846 | 6.747105e-50 | -8.615850e-47 |
Msa0092920 | Msa0296610 | 0.826719 | 2.325315e-54 | -8.615850e-47 |
Msa0092920 | Msa0302660 | 0.829452 | 5.106204e-55 | -8.615850e-47 |
Msa0092920 | Msa0308430 | 0.812964 | 3.251861e-51 | -8.615850e-47 |
Msa0092920 | Msa0317260 | 0.833286 | 5.820697e-56 | -8.615850e-47 |
Msa0092920 | Msa0318000 | 0.812181 | 4.825287e-51 | -8.615850e-47 |
Msa0092920 | Msa0319200 | 0.807298 | 5.412642e-50 | -8.615850e-47 |
Msa0092920 | Msa0323990 | 0.836261 | 1.038255e-56 | -8.615850e-47 |
Msa0092920 | Msa0324010 | 0.815545 | 8.751413e-52 | -8.615850e-47 |
Msa0092920 | Msa0334020 | 0.804145 | 2.485780e-49 | -8.615850e-47 |
Msa0092920 | Msa0334980 | 0.820250 | 7.573104e-53 | -8.615850e-47 |
Msa0092920 | Msa0339860 | 0.843713 | 1.183097e-58 | -8.615850e-47 |
Msa0092920 | Msa0342200 | 0.825297 | 5.061989e-54 | -8.615850e-47 |
Msa0092920 | Msa0352510 | 0.827052 | 1.935109e-54 | -8.615850e-47 |
Msa0092920 | Msa0362840 | 0.818947 | 1.502506e-52 | -8.615850e-47 |
Msa0092920 | Msa0367370 | 0.841550 | 4.438820e-58 | -8.615850e-47 |
Msa0092920 | Msa0367490 | 0.808940 | 2.418737e-50 | -8.615850e-47 |
Msa0092920 | Msa0371070 | 0.801863 | 7.366614e-49 | -8.615850e-47 |
Msa0092920 | Msa0377560 | 0.809553 | 1.787831e-50 | -8.615850e-47 |
Msa0092920 | Msa0377630 | 0.809595 | 1.750586e-50 | -8.615850e-47 |
Msa0092920 | Msa0379390 | 0.806073 | 9.817604e-50 | -8.615850e-47 |
Msa0092920 | Msa0380310 | 0.822325 | 2.516847e-53 | -8.615850e-47 |
Msa0092920 | Msa0380360 | 0.803879 | 2.824192e-49 | -8.615850e-47 |
Msa0092920 | Msa0382500 | 0.833546 | 5.011014e-56 | -8.615850e-47 |
Msa0092920 | Msa0387790 | 0.800804 | 1.213472e-48 | -8.615850e-47 |
Msa0092920 | Msa0411560 | 0.806376 | 8.478289e-50 | -8.615850e-47 |
Msa0092920 | Msa0415460 | 0.800174 | 1.631334e-48 | -8.615850e-47 |
Msa0092920 | Msa0417630 | 0.842062 | 3.252557e-58 | -8.615850e-47 |
Msa0092920 | Msa0426730 | 0.805059 | 1.602563e-49 | -8.615850e-47 |
Msa0092920 | Msa0427590 | 0.815070 | 1.116133e-51 | -8.615850e-47 |
Msa0092920 | Msa0431430 | 0.876925 | 9.476193e-69 | -8.615850e-47 |
Msa0092920 | Msa0432680 | 0.845496 | 3.916553e-59 | -8.615850e-47 |
Msa0092920 | Msa0436450 | 0.801542 | 8.571287e-49 | -8.615850e-47 |
Msa0092920 | Msa0446480 | 0.822400 | 2.417976e-53 | -8.615850e-47 |
Msa0092920 | Msa0467800 | 0.807636 | 4.587384e-50 | -8.615850e-47 |
Msa0092920 | Msa0467880 | 0.814123 | 1.808672e-51 | -8.615850e-47 |
Msa0092920 | Msa0476180 | 0.812157 | 4.882620e-51 | -8.615850e-47 |
Msa0092920 | Msa0476320 | 0.885976 | 5.106407e-72 | -8.615850e-47 |
Msa0092920 | Msa0485280 | 0.803966 | 2.709157e-49 | -8.615850e-47 |
Msa0092920 | Msa0490300 | 0.808317 | 3.286612e-50 | -8.615850e-47 |
Msa0092920 | Msa0518160 | 0.828975 | 6.665124e-55 | -8.615850e-47 |
Msa0092920 | Msa0520320 | 0.889355 | 2.607879e-73 | -8.615850e-47 |
Msa0092920 | Msa0524050 | 0.810131 | 1.342803e-50 | -8.615850e-47 |
Msa0092920 | Msa0524120 | 0.803071 | 4.151807e-49 | -8.615850e-47 |
Msa0092920 | Msa0526130 | 0.802237 | 6.169782e-49 | -8.615850e-47 |
Msa0092920 | Msa0527590 | 0.809066 | 2.273199e-50 | -8.615850e-47 |
Msa0092920 | Msa0527600 | 0.807861 | 4.109945e-50 | -8.615850e-47 |
Msa0092920 | Msa0532840 | 0.856721 | 2.656404e-62 | -8.615850e-47 |
Msa0092920 | Msa0533010 | 0.855266 | 7.082030e-62 | -8.615850e-47 |
Msa0092920 | Msa0542040 | 0.809262 | 2.064484e-50 | -8.615850e-47 |
Msa0092920 | Msa0546380 | 0.831386 | 1.718989e-55 | -8.615850e-47 |
Msa0092920 | Msa0546740 | 0.838396 | 2.947753e-57 | -8.615850e-47 |
Msa0092920 | Msa0555940 | 0.824316 | 8.623220e-54 | -8.615850e-47 |
Msa0092920 | Msa0567290 | 0.852614 | 4.113754e-61 | -8.615850e-47 |
Msa0092920 | Msa0576420 | 0.832573 | 8.751686e-56 | -8.615850e-47 |
Msa0092920 | Msa0578900 | 0.809921 | 1.489811e-50 | -8.615850e-47 |
Msa0092920 | Msa0579610 | 0.801075 | 1.068345e-48 | -8.615850e-47 |
Msa0092920 | Msa0581460 | 0.817920 | 2.566913e-52 | -8.615850e-47 |
Msa0092920 | Msa0583790 | 0.800421 | 1.452631e-48 | -8.615850e-47 |
Msa0092920 | Msa0583930 | 0.845060 | 5.137959e-59 | -8.615850e-47 |
Msa0092920 | Msa0583940 | 0.828479 | 8.786380e-55 | -8.615850e-47 |
Msa0092920 | Msa0587900 | 0.809526 | 1.811672e-50 | -8.615850e-47 |
Msa0092920 | Msa0589290 | 0.810660 | 1.032307e-50 | -8.615850e-47 |
Msa0092920 | Msa0604700 | 0.851292 | 9.759693e-61 | -8.615850e-47 |
Msa0092920 | Msa0607300 | 0.819437 | 1.162059e-52 | -8.615850e-47 |
Msa0092920 | Msa0607480 | 0.829235 | 5.765312e-55 | -8.615850e-47 |
Msa0092920 | Msa0610860 | 0.805997 | 1.018922e-49 | -8.615850e-47 |
Msa0092920 | Msa0614230 | 0.800167 | 1.636084e-48 | -8.615850e-47 |
Msa0092920 | Msa0619330 | 0.837355 | 5.457509e-57 | -8.615850e-47 |
Msa0092920 | Msa0640880 | 0.800789 | 1.222131e-48 | -8.615850e-47 |
Msa0092920 | Msa0642650 | 0.849291 | 3.552855e-60 | -8.615850e-47 |
Msa0092920 | Msa0647750 | 0.816185 | 6.300316e-52 | -8.615850e-47 |
Msa0092920 | Msa0667970 | 0.851884 | 6.634798e-61 | -8.615850e-47 |
Msa0092920 | Msa0681890 | 0.852516 | 4.385171e-61 | -8.615850e-47 |
Msa0092920 | Msa0682400 | 0.822992 | 1.760173e-53 | -8.615850e-47 |
Msa0092920 | Msa0685540 | 0.808685 | 2.742326e-50 | -8.615850e-47 |
Msa0092920 | Msa0690350 | 0.826600 | 2.482579e-54 | -8.615850e-47 |
Msa0092920 | Msa0703720 | 0.822351 | 2.482020e-53 | -8.615850e-47 |
Msa0092920 | Msa0703760 | 0.851484 | 8.610249e-61 | -8.615850e-47 |
Msa0092920 | Msa0704220 | 0.816184 | 6.303712e-52 | -8.615850e-47 |
Msa0092920 | Msa0704990 | 0.811251 | 7.688160e-51 | -8.615850e-47 |
Msa0092920 | Msa0707780 | 0.838639 | 2.552168e-57 | -8.615850e-47 |
Msa0092920 | Msa0709480 | 0.871231 | 8.002573e-67 | -8.615850e-47 |
Msa0092920 | Msa0717090 | 0.834126 | 3.589559e-56 | -8.615850e-47 |
Msa0092920 | Msa0720270 | 0.801134 | 1.039137e-48 | -8.615850e-47 |
Msa0092920 | Msa0725920 | 0.802229 | 6.195317e-49 | -8.615850e-47 |
Msa0092920 | Msa0730180 | 0.852761 | 3.733107e-61 | -8.615850e-47 |
Msa0092920 | Msa0761790 | 0.812834 | 3.472505e-51 | -8.615850e-47 |
Msa0092920 | Msa0766470 | 0.801646 | 8.163459e-49 | -8.615850e-47 |
Msa0092920 | Msa0769830 | 0.808530 | 2.960500e-50 | -8.615850e-47 |
Msa0092920 | Msa0770430 | 0.836786 | 7.627559e-57 | -8.615850e-47 |
Msa0092920 | Msa0780140 | 0.815390 | 9.476594e-52 | -8.615850e-47 |
Msa0092920 | Msa0790180 | 0.822620 | 2.149403e-53 | -8.615850e-47 |
Msa0092920 | Msa0790830 | 0.859401 | 4.244672e-63 | -8.615850e-47 |
Msa0092920 | Msa0797220 | 0.810345 | 1.207373e-50 | -8.615850e-47 |
Msa0092920 | Msa0802210 | 0.812617 | 3.874283e-51 | -8.615850e-47 |
Msa0092920 | Msa0804110 | 0.822213 | 2.671610e-53 | -8.615850e-47 |
Msa0092920 | Msa0808420 | 0.837576 | 4.790304e-57 | -8.615850e-47 |
Msa0092920 | Msa0824140 | 0.812661 | 3.790106e-51 | -8.615850e-47 |
Msa0092920 | Msa0842220 | 0.810756 | 9.839308e-51 | -8.615850e-47 |
Msa0092920 | Msa0843690 | 0.805020 | 1.633182e-49 | -8.615850e-47 |
Msa0092920 | Msa0848360 | 0.830096 | 3.559283e-55 | -8.615850e-47 |
Msa0092920 | Msa0848380 | 0.805325 | 1.409828e-49 | -8.615850e-47 |
Msa0092920 | Msa0848760 | 0.806794 | 6.920340e-50 | -8.615850e-47 |
Msa0092920 | Msa0855020 | 0.800526 | 1.382947e-48 | -8.615850e-47 |
Msa0092920 | Msa0863250 | 0.813550 | 2.418163e-51 | -8.615850e-47 |
Msa0092920 | Msa0864150 | 0.801357 | 9.353313e-49 | -8.615850e-47 |
Msa0092920 | Msa0881050 | 0.800571 | 1.353827e-48 | -8.615850e-47 |
Msa0092920 | Msa0883030 | 0.803864 | 2.843920e-49 | -8.615850e-47 |
Msa0092920 | Msa0884730 | 0.804535 | 2.061914e-49 | -8.615850e-47 |
Msa0092920 | Msa0890250 | 0.844577 | 6.938084e-59 | -8.615850e-47 |
Msa0092920 | Msa0900320 | 0.816138 | 6.453209e-52 | -8.615850e-47 |
Msa0092920 | Msa0901140 | 0.806952 | 6.407531e-50 | -8.615850e-47 |
Msa0092920 | Msa0907700 | 0.802187 | 6.318459e-49 | -8.615850e-47 |
Msa0092920 | Msa0909710 | 0.802710 | 4.930662e-49 | -8.615850e-47 |
Msa0092920 | Msa0925160 | 0.874842 | 4.921769e-68 | -8.615850e-47 |
Msa0092920 | Msa0935730 | 0.821693 | 3.525890e-53 | -8.615850e-47 |
Msa0092920 | Msa0937940 | 0.803406 | 3.540280e-49 | -8.615850e-47 |
Msa0092920 | Msa0938970 | 0.804454 | 2.143275e-49 | -8.615850e-47 |
Msa0092920 | Msa0946650 | 0.800799 | 1.216568e-48 | -8.615850e-47 |
Msa0092920 | Msa0955260 | 0.867071 | 1.792214e-65 | -8.615850e-47 |
Msa0092920 | Msa0965960 | 0.816474 | 5.427047e-52 | -8.615850e-47 |
Msa0092920 | Msa0972730 | 0.844037 | 9.688487e-59 | -8.615850e-47 |
Msa0092920 | Msa0975080 | 0.818482 | 1.916048e-52 | -8.615850e-47 |
Msa0092920 | Msa0990520 | 0.842463 | 2.546458e-58 | -8.615850e-47 |
Msa0092920 | Msa1000470 | 0.843164 | 1.658441e-58 | -8.615850e-47 |
Msa0092920 | Msa1001780 | 0.803006 | 4.283563e-49 | -8.615850e-47 |
Msa0092920 | Msa1002980 | 0.821176 | 4.640375e-53 | -8.615850e-47 |
Msa0092920 | Msa1018790 | 0.806756 | 7.047476e-50 | -8.615850e-47 |
Msa0092920 | Msa1027790 | 0.814169 | 1.766206e-51 | -8.615850e-47 |
Msa0092920 | Msa1028460 | 0.825555 | 4.397389e-54 | -8.615850e-47 |
Msa0092920 | Msa1029320 | 0.808416 | 3.131357e-50 | -8.615850e-47 |
Msa0092920 | Msa1032140 | 0.817114 | 3.899743e-52 | -8.615850e-47 |
Msa0092920 | Msa1038320 | 0.815762 | 7.828307e-52 | -8.615850e-47 |
Msa0092920 | Msa1044340 | 0.808138 | 3.588891e-50 | -8.615850e-47 |
Msa0092920 | Msa1061180 | 0.814634 | 1.394152e-51 | -8.615850e-47 |
Msa0092920 | Msa1067430 | 0.848138 | 7.416398e-60 | -8.615850e-47 |
Msa0092920 | Msa1072080 | 0.865909 | 4.192702e-65 | -8.615850e-47 |
Msa0092920 | Msa1080430 | 0.801396 | 9.183091e-49 | -8.615850e-47 |
Msa0092920 | Msa1080620 | 0.841657 | 4.160196e-58 | -8.615850e-47 |
Msa0092920 | Msa1080690 | 0.840796 | 7.006737e-58 | -8.615850e-47 |
Msa0092920 | Msa1084490 | 0.851690 | 7.529888e-61 | -8.615850e-47 |
Msa0092920 | Msa1089530 | 0.802042 | 6.766678e-49 | -8.615850e-47 |
Msa0092920 | Msa1103670 | 0.803174 | 3.953199e-49 | -8.615850e-47 |
Msa0092920 | Msa1105290 | 0.836851 | 7.342381e-57 | -8.615850e-47 |
Msa0092920 | Msa1106560 | 0.815698 | 8.090351e-52 | -8.615850e-47 |
Msa0092920 | Msa1112610 | 0.817228 | 3.677288e-52 | -8.615850e-47 |
Msa0092920 | Msa1125780 | 0.860370 | 2.165293e-63 | -8.615850e-47 |
Msa0092920 | Msa1125950 | 0.865809 | 4.511629e-65 | -8.615850e-47 |
Msa0092920 | Msa1126310 | 0.821579 | 3.746533e-53 | -8.615850e-47 |
Msa0092920 | Msa1129560 | 0.817273 | 3.591631e-52 | -8.615850e-47 |
Msa0092920 | Msa1129720 | 0.827445 | 1.558226e-54 | -8.615850e-47 |
Msa0092920 | Msa1132820 | 0.811246 | 7.704322e-51 | -8.615850e-47 |
Msa0092920 | Msa1140010 | 0.809422 | 1.907618e-50 | -8.615850e-47 |
Msa0092920 | Msa1147270 | 0.806145 | 9.481293e-50 | -8.615850e-47 |
Msa0092920 | Msa1148780 | 0.822273 | 2.587415e-53 | -8.615850e-47 |
Msa0092920 | Msa1149760 | 0.821624 | 3.656592e-53 | -8.615850e-47 |
Msa0092920 | Msa1159100 | 0.855621 | 5.581090e-62 | -8.615850e-47 |
Msa0092920 | Msa1166180 | 0.850346 | 1.801731e-60 | -8.615850e-47 |
Msa0092920 | Msa1166280 | 0.847346 | 1.225478e-59 | -8.615850e-47 |
Msa0092920 | Msa1167160 | 0.829097 | 6.228724e-55 | -8.615850e-47 |
Msa0092920 | Msa1171340 | 0.869062 | 4.102500e-66 | -8.615850e-47 |
Msa0092920 | Msa1175750 | 0.806938 | 6.451185e-50 | -8.615850e-47 |
Msa0092920 | Msa1183390 | 0.835913 | 1.272372e-56 | -8.615850e-47 |
Msa0092920 | Msa1183610 | 0.851970 | 6.273114e-61 | -8.615850e-47 |
Msa0092920 | Msa1190910 | 0.830495 | 2.843816e-55 | -8.615850e-47 |
Msa0092920 | Msa1197110 | 0.829816 | 4.164281e-55 | -8.615850e-47 |
Msa0092920 | Msa1210770 | 0.820588 | 6.336789e-53 | -8.615850e-47 |
Msa0092920 | Msa1214900 | 0.817154 | 3.820928e-52 | -8.615850e-47 |
Msa0092920 | Msa1219250 | 0.817386 | 3.388408e-52 | -8.615850e-47 |
Msa0092920 | Msa1222390 | 0.820005 | 8.620612e-53 | -8.615850e-47 |
Msa0092920 | Msa1228950 | 0.822448 | 2.356092e-53 | -8.615850e-47 |
Msa0092920 | Msa1229050 | 0.809161 | 2.169748e-50 | -8.615850e-47 |
Msa0092920 | Msa1235890 | 0.803609 | 3.213278e-49 | -8.615850e-47 |
Msa0092920 | Msa1237030 | 0.832600 | 8.617112e-56 | -8.615850e-47 |
Msa0092920 | Msa1238710 | 0.817438 | 3.297505e-52 | -8.615850e-47 |
Msa0092920 | Msa1250670 | 0.826326 | 2.884604e-54 | -8.615850e-47 |
Msa0092920 | Msa1259470 | 0.804855 | 1.768171e-49 | -8.615850e-47 |
Msa0092920 | Msa1271490 | 0.809171 | 2.158988e-50 | -8.615850e-47 |
Msa0092920 | Msa1271510 | 0.839197 | 1.829865e-57 | -8.615850e-47 |
Msa0092920 | Msa1271600 | 0.847295 | 1.266134e-59 | -8.615850e-47 |
Msa0092920 | Msa1280120 | 0.802563 | 5.288174e-49 | -8.615850e-47 |
Msa0092920 | Msa1293530 | 0.832820 | 7.601065e-56 | -8.615850e-47 |
Msa0092920 | Msa1305520 | 0.805461 | 1.320457e-49 | -8.615850e-47 |
Msa0092920 | Msa1307370 | 0.802864 | 4.582938e-49 | -8.615850e-47 |
Msa0092920 | Msa1309360 | 0.824147 | 9.446664e-54 | -8.615850e-47 |
Msa0092920 | Msa1315980 | 0.801602 | 8.335070e-49 | -8.615850e-47 |
Msa0092920 | Msa1325980 | 0.802294 | 6.005846e-49 | -8.615850e-47 |
Msa0092920 | Msa1337090 | 0.813845 | 2.082900e-51 | -8.615850e-47 |
Msa0092920 | Msa1344430 | 0.814436 | 1.542016e-51 | -8.615850e-47 |
Msa0092920 | Msa1354040 | 0.803216 | 3.874445e-49 | -8.615850e-47 |
Msa0092920 | Msa1365870 | 0.831760 | 1.390148e-55 | -8.615850e-47 |
Msa0092920 | Msa1367600 | 0.820085 | 8.262092e-53 | -8.615850e-47 |
Msa0092920 | Msa1367940 | 0.800987 | 1.113386e-48 | -8.615850e-47 |
Msa0092920 | Msa1368730 | 0.803749 | 3.005066e-49 | -8.615850e-47 |
Msa0092920 | Msa1373510 | 0.801056 | 1.078041e-48 | -8.615850e-47 |
Msa0092920 | Msa1374810 | 0.802531 | 5.368517e-49 | -8.615850e-47 |
Msa0092920 | Msa1376640 | 0.826595 | 2.488150e-54 | -8.615850e-47 |
Msa0092920 | Msa1379980 | 0.810263 | 1.257478e-50 | -8.615850e-47 |
Msa0092920 | Msa1381130 | 0.822424 | 2.386694e-53 | -8.615850e-47 |
Msa0092920 | Msa1382310 | 0.816600 | 5.085744e-52 | -8.615850e-47 |
Msa0092920 | Msa1398480 | 0.812546 | 4.014820e-51 | -8.615850e-47 |
Msa0092920 | Msa1404370 | 0.803853 | 2.858633e-49 | -8.615850e-47 |
Msa0092920 | Msa1405770 | 0.829304 | 5.548764e-55 | -8.615850e-47 |
Msa0092920 | Msa1406550 | 0.809592 | 1.753860e-50 | -8.615850e-47 |
Msa0092920 | Msa1407710 | 0.847390 | 1.191939e-59 | -8.615850e-47 |
Msa0092920 | Msa1410170 | 0.851563 | 8.181160e-61 | -8.615850e-47 |
Msa0092920 | Msa1412080 | 0.831531 | 1.583657e-55 | -8.615850e-47 |
Msa0092920 | Msa1412520 | 0.826157 | 3.165241e-54 | -8.615850e-47 |
Msa0092920 | Msa1415250 | 0.838487 | 2.792794e-57 | -8.615850e-47 |
Msa0092920 | Msa1416460 | 0.819045 | 1.427179e-52 | -8.615850e-47 |
Msa0092920 | Msa1418200 | 0.821645 | 3.617492e-53 | -8.615850e-47 |
Msa0092920 | Msa1418600 | 0.808624 | 2.826110e-50 | -8.615850e-47 |
Msa0092920 | Msa1422490 | 0.845885 | 3.071021e-59 | -8.615850e-47 |
Msa0092920 | Msa1423190 | 0.806706 | 7.223122e-50 | -8.615850e-47 |
Msa0092920 | Msa1423550 | 0.806712 | 7.200260e-50 | -8.615850e-47 |
Msa0092920 | Msa1424240 | 0.806992 | 6.282975e-50 | -8.615850e-47 |
Msa0092920 | Msa1430270 | 0.847051 | 1.476318e-59 | -8.615850e-47 |
Msa0092920 | Msa1430760 | 0.804230 | 2.386784e-49 | -8.615850e-47 |
Msa0092920 | Msa1431960 | 0.807030 | 6.168378e-50 | -8.615850e-47 |
Msa0092920 | Msa1432640 | 0.801984 | 6.956374e-49 | -8.615850e-47 |
Msa0092920 | Msa1435040 | 0.810159 | 1.323995e-50 | -8.615850e-47 |
Msa0092920 | Msa1439670 | 0.813746 | 2.189695e-51 | -8.615850e-47 |
Msa0092920 | Msa1444450 | 0.817573 | 3.075014e-52 | -8.615850e-47 |
Msa0092920 | Msa1447230 | 0.836140 | 1.114354e-56 | -8.615850e-47 |
Msa0092920 | Msa1449680 | 0.811852 | 5.689500e-51 | -8.615850e-47 |
Msa0092920 | Msa1451840 | 0.804613 | 1.986124e-49 | -8.615850e-47 |
Msa0092920 | Msa1458330 | 0.830675 | 2.569826e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092920 | MtrunA17_Chr3g0135991 | 94.134 | 358 | 8 | 1 | 1 | 345 | 1 | 358 | 0.0 | 696 |
Msa0092920 | MtrunA17_Chr1g0186361 | 26.609 | 233 | 153 | 5 | 81 | 296 | 576 | 807 | 5.17e-16 | 79.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092920 | AT4G33110.1 | 68.732 | 355 | 98 | 1 | 4 | 345 | 1 | 355 | 0.0 | 532 |
Msa0092920 | AT4G33110.2 | 68.732 | 355 | 98 | 1 | 4 | 345 | 1 | 355 | 0.0 | 532 |
Msa0092920 | AT4G33120.1 | 65.915 | 355 | 108 | 1 | 4 | 345 | 1 | 355 | 0.0 | 511 |
Msa0092920 | AT3G23510.1 | 25.296 | 253 | 168 | 6 | 81 | 316 | 577 | 825 | 7.97e-14 | 73.2 |
Msa0092920 | AT3G23530.1 | 24.901 | 253 | 169 | 6 | 81 | 316 | 577 | 825 | 1.37e-13 | 72.4 |
Msa0092920 | AT3G23470.3 | 26.596 | 188 | 124 | 3 | 81 | 254 | 196 | 383 | 1.71e-13 | 71.6 |
Msa0092920 | AT3G23470.2 | 26.596 | 188 | 124 | 3 | 81 | 254 | 196 | 383 | 1.71e-13 | 71.6 |
Msa0092920 | AT3G23470.1 | 26.596 | 188 | 124 | 3 | 81 | 254 | 169 | 356 | 1.79e-13 | 71.6 |
Find 80 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCATATGTTGATTCCATAAT+TGG | 0.122160 | 1_2:-75699674 | None:intergenic |
AATTCGTAATGTTGAGATTT+TGG | 0.142343 | 1_2:-75697692 | None:intergenic |
GAACTGTATGACCATCTTTC+AGG | 0.193403 | 1_2:-75698483 | None:intergenic |
TCTTTCTTTAAGCTGGTTCT+TGG | 0.257853 | 1_2:+75697722 | Msa0092920:CDS |
ATAGCTGTAGCAGAACTATT+TGG | 0.260405 | 1_2:+75699743 | Msa0092920:CDS |
GTCAACCATTGGCTGGTAAA+TGG | 0.264020 | 1_2:+75699466 | Msa0092920:CDS |
CTTGATTTGAGAATTGATTC+AGG | 0.280867 | 1_2:+75699841 | Msa0092920:three_prime_UTR |
TCTAACCTCAAACATTTCTA+TGG | 0.304284 | 1_2:-75698878 | None:intergenic |
AATCAAGAGAAGAATGGTTT+TGG | 0.307104 | 1_2:-75699825 | None:intergenic |
ACGTGTGTGTCTTTGTTTAT+TGG | 0.307858 | 1_2:+75697293 | Msa0092920:five_prime_UTR |
ACAGTCAGTTCCAGGGTTAC+AGG | 0.313587 | 1_2:+75698557 | Msa0092920:intron |
GACTTCCATCAAGCCAATTA+TGG | 0.317037 | 1_2:+75699661 | Msa0092920:CDS |
CAAGAATTACAGTCAGTTCC+AGG | 0.329562 | 1_2:+75698549 | Msa0092920:intron |
ATTACAAGATACTTCTTTAC+CGG | 0.330934 | 1_2:+75699246 | Msa0092920:CDS |
AGAAATGATGAACGAATAAA+AGG | 0.335415 | 1_2:-75699029 | None:intergenic |
AGTCTCCTGATGACGGCATC+AGG | 0.366796 | 1_2:-75697454 | None:intergenic |
TCAACCATTGGCTGGTAAAT+GGG | 0.399932 | 1_2:+75699467 | Msa0092920:CDS |
AGAAAGTACAGTGAGCAAAT+TGG | 0.401458 | 1_2:-75697552 | None:intergenic |
ACCTACCTCTTTCTTTAAGC+TGG | 0.401709 | 1_2:+75697715 | Msa0092920:CDS |
AGCCTCTTCCAATGTCTTTG+AGG | 0.408387 | 1_2:-75698422 | None:intergenic |
TGTCAACTACGACGGCCATT+TGG | 0.412090 | 1_2:-75700012 | None:intergenic |
TGCTCCCTGATGCCGTCATC+AGG | 0.412465 | 1_2:+75697449 | Msa0092920:CDS |
GAACTATTTGGATACAATAA+TGG | 0.412686 | 1_2:+75699755 | Msa0092920:CDS |
TGATTCCATAATTGGCTTGA+TGG | 0.414616 | 1_2:-75699666 | None:intergenic |
ACATCAGTACTGACAGCAAT+AGG | 0.445899 | 1_2:-75697668 | None:intergenic |
CTACCAAATGGACTGTCTAC+TGG | 0.453211 | 1_2:+75699708 | Msa0092920:CDS |
AGACATTAGTACATTTGAAA+TGG | 0.457001 | 1_2:+75698831 | Msa0092920:CDS |
CCAATTATGGAATCAACATA+TGG | 0.460490 | 1_2:+75699674 | Msa0092920:CDS |
AGCTTCACGGTGGTGTTGTA+AGG | 0.461791 | 1_2:-75697400 | None:intergenic |
ATTGCAGATTCCTGTAACCC+TGG | 0.462607 | 1_2:-75698567 | None:intergenic |
CGAAGAGTGGCTCAAAAGAA+TGG | 0.463992 | 1_2:+75699628 | Msa0092920:CDS |
GCCATCCACTTTCATCCAGT+TGG | 0.469157 | 1_2:-75699007 | None:intergenic |
CTCTTCTGCCTCAAAGACAT+TGG | 0.471861 | 1_2:+75698414 | Msa0092920:CDS |
AAGTGTGGTGTGGTAGTTGA+TGG | 0.474442 | 1_2:+75697351 | Msa0092920:exon |
TGCTGCAGGCATAGTTCCTC+CGG | 0.476336 | 1_2:-75699265 | None:intergenic |
AGCATTTGCCTACCACTTTG+AGG | 0.477976 | 1_2:+75699059 | Msa0092920:CDS |
TTCTCAAGAAGATATCCAAC+TGG | 0.482343 | 1_2:+75698992 | Msa0092920:CDS |
AAGAACCAGCTTAAAGAAAG+AGG | 0.482405 | 1_2:-75697720 | None:intergenic |
GCAAAGATTCAGCTACCAAA+TGG | 0.488606 | 1_2:+75699696 | Msa0092920:CDS |
GAAAGCTGAAGTTCAGAAGA+AGG | 0.489672 | 1_2:-75697520 | None:intergenic |
TGTGACTTGTTCTGTTCTTG+TGG | 0.492519 | 1_2:-75697319 | None:intergenic |
TTCTCAAATCAAGAGAAGAA+TGG | 0.496199 | 1_2:-75699831 | None:intergenic |
TCTCCAGTAGACAGTCCATT+TGG | 0.500310 | 1_2:-75699711 | None:intergenic |
TTGGAAACAACCTCAAATAC+AGG | 0.508399 | 1_2:+75697741 | Msa0092920:CDS |
CTACGACGGCCATTTGGCAT+TGG | 0.511496 | 1_2:-75700006 | None:intergenic |
ACAGTTCTTGATGTCGGATG+CGG | 0.517068 | 1_2:+75698499 | Msa0092920:CDS |
AGAGTTCACTACCGGGGCAT+AGG | 0.525860 | 1_2:-75700116 | None:intergenic |
GATACAATAATGGTGAAGAA+TGG | 0.527408 | 1_2:+75699765 | Msa0092920:CDS |
ACCACCGTGAAGCTGATGCT+TGG | 0.540117 | 1_2:+75697409 | Msa0092920:CDS |
TGCCTCAAAGACATTGGAAG+AGG | 0.542100 | 1_2:+75698420 | Msa0092920:CDS |
TGAACCAAGCATCAGCTTCA+CGG | 0.542958 | 1_2:-75697413 | None:intergenic |
GTTTCCCATTTACCAGCCAA+TGG | 0.543039 | 1_2:-75699471 | None:intergenic |
GATATCCAACTGGATGAAAG+TGG | 0.544699 | 1_2:+75699002 | Msa0092920:CDS |
GAAAACAGACCAATGCCAAA+TGG | 0.548848 | 1_2:+75699997 | Msa0092920:three_prime_UTR |
GTGGTAGTTGATGGAAAAGA+TGG | 0.551164 | 1_2:+75697360 | Msa0092920:exon |
AGTGGTAGGCAAATGCTTTG+TGG | 0.556397 | 1_2:-75699053 | None:intergenic |
CAATAATGGTGAAGAATGGA+TGG | 0.562198 | 1_2:+75699769 | Msa0092920:CDS |
GCCGTCGTAGTTGACACAAA+AGG | 0.564039 | 1_2:+75700019 | Msa0092920:three_prime_UTR |
ATCAGAGTGATATCTTCACT+TGG | 0.565437 | 1_2:+75699975 | Msa0092920:three_prime_UTR |
AAGAATTACAGTCAGTTCCA+GGG | 0.566533 | 1_2:+75698550 | Msa0092920:intron |
ATGTTACTGTTGTCAACCAT+TGG | 0.570038 | 1_2:+75699455 | Msa0092920:CDS |
TAAAGAAGTAGATTTGCTGC+AGG | 0.572831 | 1_2:-75699279 | None:intergenic |
TACTGTTGTCAACCATTGGC+TGG | 0.579302 | 1_2:+75699459 | Msa0092920:CDS |
GAAGTTTACCTCAAAGTGGT+AGG | 0.587833 | 1_2:-75699067 | None:intergenic |
GAGAGATCAAACCTGAAAGA+TGG | 0.590354 | 1_2:+75698472 | Msa0092920:CDS |
GGTCATACAGTTCTTGATGT+CGG | 0.592044 | 1_2:+75698493 | Msa0092920:CDS |
GGAAACACTACGCACAAACC+AGG | 0.597454 | 1_2:+75699488 | Msa0092920:CDS |
ATCAAGAACAGCCTATGCCC+CGG | 0.604780 | 1_2:+75700105 | Msa0092920:three_prime_UTR |
GGAGCTGCAGCTGCAAAATG+TGG | 0.607827 | 1_2:+75698795 | Msa0092920:CDS |
ACCAGCTTAAAGAAAGAGGT+AGG | 0.613974 | 1_2:-75697716 | None:intergenic |
ACGTGTGAGTCTCCTGATGA+CGG | 0.614974 | 1_2:-75697461 | None:intergenic |
TCCAACTGGATGAAAGTGGA+TGG | 0.617956 | 1_2:+75699006 | Msa0092920:CDS |
ATATGAAGTTTACCTCAAAG+TGG | 0.632893 | 1_2:-75699071 | None:intergenic |
GTCTCCTGATGACGGCATCA+GGG | 0.634408 | 1_2:-75697453 | None:intergenic |
ACAAGATACTTCTTTACCGG+AGG | 0.634907 | 1_2:+75699249 | Msa0092920:CDS |
GTCACAGAAGTCAAGAAGTG+TGG | 0.656919 | 1_2:+75697336 | Msa0092920:five_prime_UTR |
AAAGACACACACGTACGTTG+TGG | 0.660038 | 1_2:-75697284 | None:intergenic |
AGAAGTCAAGAAGTGTGGTG+TGG | 0.696584 | 1_2:+75697341 | Msa0092920:five_prime_UTR |
AAGGCTTGTAAGAAGAACGA+AGG | 0.696633 | 1_2:-75697501 | None:intergenic |
ACCAAGCATCAGCTTCACGG+TGG | 0.763639 | 1_2:-75697410 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAAAAAGTAAAAAGATA+AGG | + | chr1_2:75697242-75697261 | Msa0092920:five_prime_UTR | 10.0% |
!! | TGTTCTATATATAACAAAAT+CGG | - | chr1_2:75697578-75697597 | None:intergenic | 15.0% |
!!! | TATAAGTTATTTCTATACAA+GGG | + | chr1_2:75697978-75697997 | Msa0092920:intron | 15.0% |
!! | TTAAATTGTTTATCCAAACA+CGG | - | chr1_2:75697917-75697936 | None:intergenic | 20.0% |
!!! | GTATAAGTTATTTCTATACA+AGG | + | chr1_2:75697977-75697996 | Msa0092920:intron | 20.0% |
!!! | AATCATTTTACATCGTATTA+AGG | - | chr1_2:75698269-75698288 | None:intergenic | 20.0% |
!! | TGAACATTACATAAATCATA+AGG | - | chr1_2:75698361-75698380 | None:intergenic | 20.0% |
!! | TACAATATCAAGAAATATAC+CGG | - | chr1_2:75698628-75698647 | None:intergenic | 20.0% |
!! | TATCACTCTGATAAAAAAAT+AGG | - | chr1_2:75699967-75699986 | None:intergenic | 20.0% |
!!! | GAATAAATTTCATTTTAGTG+TGG | + | chr1_2:75700047-75700066 | Msa0092920:three_prime_UTR | 20.0% |
!! | ATTCGTAATGTTGAGATTTT+GGG | - | chr1_2:75697694-75697713 | None:intergenic | 25.0% |
!! | AATTCGTAATGTTGAGATTT+TGG | - | chr1_2:75697695-75697714 | None:intergenic | 25.0% |
! | CTTAAAAATACCTGTATTTG+AGG | - | chr1_2:75697754-75697773 | None:intergenic | 25.0% |
! | CTTATACAATAAGCTGAAAA+CGG | + | chr1_2:75698065-75698084 | Msa0092920:intron | 25.0% |
!! | GATTTATTTGAGTTTATCCA+CGG | - | chr1_2:75698154-75698173 | None:intergenic | 25.0% |
! | CTCAAATAAATCAAGTCAAA+CGG | + | chr1_2:75698162-75698181 | Msa0092920:intron | 25.0% |
! | GATGTAAAATGATTGTTTCA+TGG | + | chr1_2:75698275-75698294 | Msa0092920:intron | 25.0% |
! | ATGTTCATATTTGTATGAAC+TGG | + | chr1_2:75698374-75698393 | Msa0092920:intron | 25.0% |
! | AGACATTAGTACATTTGAAA+TGG | + | chr1_2:75698831-75698850 | Msa0092920:CDS | 25.0% |
!! | ATTTTCCATAGAAATGTTTG+AGG | + | chr1_2:75698873-75698892 | Msa0092920:CDS | 25.0% |
! | AGAAATGATGAACGAATAAA+AGG | - | chr1_2:75699032-75699051 | None:intergenic | 25.0% |
!!! | CAATTAGTCTTATTAGGTAT+TGG | - | chr1_2:75699150-75699169 | None:intergenic | 25.0% |
!!! | AGAACTCAATTAGTCTTATT+AGG | - | chr1_2:75699156-75699175 | None:intergenic | 25.0% |
! | ATTACAAGATACTTCTTTAC+CGG | + | chr1_2:75699246-75699265 | Msa0092920:CDS | 25.0% |
! | GCTTTACACAACAAAATTAT+CGG | - | chr1_2:75699372-75699391 | None:intergenic | 25.0% |
! | AGAATCATGACGAAATATAA+AGG | - | chr1_2:75699394-75699413 | None:intergenic | 25.0% |
! | TCACTTGTAATTGAATTCTT+TGG | + | chr1_2:75699416-75699435 | Msa0092920:intron | 25.0% |
! | TCTATCCATAGTTTACTATT+TGG | + | chr1_2:75699551-75699570 | Msa0092920:intron | 25.0% |
! | GAACTATTTGGATACAATAA+TGG | + | chr1_2:75699755-75699774 | Msa0092920:CDS | 25.0% |
!!! | AAATTTCATTTTAGTGTGGT+TGG | + | chr1_2:75700051-75700070 | Msa0092920:three_prime_UTR | 25.0% |
! | ATCTAAGAACTGATTCATCA+AGG | + | chr1_2:75697803-75697822 | Msa0092920:intron | 30.0% |
! | TCTAAGAACTGATTCATCAA+GGG | + | chr1_2:75697804-75697823 | Msa0092920:intron | 30.0% |
TATATTACTAAGACCGTGTT+TGG | + | chr1_2:75697901-75697920 | Msa0092920:intron | 30.0% | |
AATAAGCTGAAAACGGTTTA+TGG | + | chr1_2:75698072-75698091 | Msa0092920:intron | 30.0% | |
ACTATCTTTAACGAATATGG+TGG | + | chr1_2:75698185-75698204 | Msa0092920:intron | 30.0% | |
!!! | AATAAAAGCTTTTTGAGTCG+TGG | - | chr1_2:75698594-75698613 | None:intergenic | 30.0% |
! | GACTCAAAAAGCTTTTATTG+AGG | + | chr1_2:75698595-75698614 | Msa0092920:CDS | 30.0% |
AAACTATATGACATGCACAA+TGG | - | chr1_2:75698664-75698683 | None:intergenic | 30.0% | |
! | ATGATTTGCAAGACAAGTAT+TGG | - | chr1_2:75698727-75698746 | None:intergenic | 30.0% |
TCTAACCTCAAACATTTCTA+TGG | - | chr1_2:75698881-75698900 | None:intergenic | 30.0% | |
!! | ATGTTTGAGGTTAGATTTTG+TGG | + | chr1_2:75698886-75698905 | Msa0092920:intron | 30.0% |
!! | TGTTTGAGGTTAGATTTTGT+GGG | + | chr1_2:75698887-75698906 | Msa0092920:intron | 30.0% |
ATATGAAGTTTACCTCAAAG+TGG | - | chr1_2:75699074-75699093 | None:intergenic | 30.0% | |
! | TACTTGCTACTTATACATGT+AGG | + | chr1_2:75699203-75699222 | Msa0092920:intron | 30.0% |
AGGACAAAAATGAAGATGAT+TGG | + | chr1_2:75699223-75699242 | Msa0092920:intron | 30.0% | |
CAACATAATTCAAGCTTACT+TGG | - | chr1_2:75699308-75699327 | None:intergenic | 30.0% | |
CGTTACCAAATAGTAAACTA+TGG | - | chr1_2:75699559-75699578 | None:intergenic | 30.0% | |
!! | CCATATGTTGATTCCATAAT+TGG | - | chr1_2:75699677-75699696 | None:intergenic | 30.0% |
CCAATTATGGAATCAACATA+TGG | + | chr1_2:75699674-75699693 | Msa0092920:CDS | 30.0% | |
GATACAATAATGGTGAAGAA+TGG | + | chr1_2:75699765-75699784 | Msa0092920:CDS | 30.0% | |
! | AATCAAGAGAAGAATGGTTT+TGG | - | chr1_2:75699828-75699847 | None:intergenic | 30.0% |
TTCTCAAATCAAGAGAAGAA+TGG | - | chr1_2:75699834-75699853 | None:intergenic | 30.0% | |
! | CTTGATTTGAGAATTGATTC+AGG | + | chr1_2:75699841-75699860 | Msa0092920:three_prime_UTR | 30.0% |
AAAACAAAAACTGTTCAACG+AGG | + | chr1_2:75699876-75699895 | Msa0092920:three_prime_UTR | 30.0% | |
ACTCTGATAAAAAAATAGGC+AGG | - | chr1_2:75699963-75699982 | None:intergenic | 30.0% | |
! | ACGTGTGTGTCTTTGTTTAT+TGG | + | chr1_2:75697293-75697312 | Msa0092920:five_prime_UTR | 35.0% |
! | AGAAAGTACAGTGAGCAAAT+TGG | - | chr1_2:75697555-75697574 | None:intergenic | 35.0% |
AAGAACCAGCTTAAAGAAAG+AGG | - | chr1_2:75697723-75697742 | None:intergenic | 35.0% | |
! | TCTTTCTTTAAGCTGGTTCT+TGG | + | chr1_2:75697722-75697741 | Msa0092920:CDS | 35.0% |
TTGGAAACAACCTCAAATAC+AGG | + | chr1_2:75697741-75697760 | Msa0092920:CDS | 35.0% | |
TGCAGTTAAGCTATACACAA+AGG | - | chr1_2:75697867-75697886 | None:intergenic | 35.0% | |
TGTGTATAGCTTAACTGCAT+TGG | + | chr1_2:75697868-75697887 | Msa0092920:intron | 35.0% | |
GTGTATAGCTTAACTGCATT+GGG | + | chr1_2:75697869-75697888 | Msa0092920:intron | 35.0% | |
AAAACACCTGTGAGACTATT+AGG | - | chr1_2:75698128-75698147 | None:intergenic | 35.0% | |
CGGACTATCTTTAACGAATA+TGG | + | chr1_2:75698182-75698201 | Msa0092920:intron | 35.0% | |
TCTTTAACGAATATGGTGGT+AGG | + | chr1_2:75698189-75698208 | Msa0092920:intron | 35.0% | |
CTTTAACGAATATGGTGGTA+GGG | + | chr1_2:75698190-75698209 | Msa0092920:intron | 35.0% | |
AAGAATTACAGTCAGTTCCA+GGG | + | chr1_2:75698550-75698569 | Msa0092920:intron | 35.0% | |
! | CTTTTATTGAGGAGAAATGC+CGG | + | chr1_2:75698606-75698625 | Msa0092920:CDS | 35.0% |
TTCTCAAGAAGATATCCAAC+TGG | + | chr1_2:75698992-75699011 | Msa0092920:CDS | 35.0% | |
CAAACTGAGATAGTCAACTA+AGG | - | chr1_2:75699101-75699120 | None:intergenic | 35.0% | |
!! | TAAAGAAGTAGATTTGCTGC+AGG | - | chr1_2:75699282-75699301 | None:intergenic | 35.0% |
GGTACTACTGCAATACTATT+GGG | - | chr1_2:75699351-75699370 | None:intergenic | 35.0% | |
!! | AATTCTTTGGTGATGTGTGA+AGG | + | chr1_2:75699429-75699448 | Msa0092920:intron | 35.0% |
ATGTTACTGTTGTCAACCAT+TGG | + | chr1_2:75699455-75699474 | Msa0092920:CDS | 35.0% | |
GTTGGAATATGCTGAATTGT+TGG | + | chr1_2:75699510-75699529 | Msa0092920:intron | 35.0% | |
!!! | ATTTATTTTGCAGCGAAGAG+TGG | + | chr1_2:75699615-75699634 | Msa0092920:intron | 35.0% |
!! | TGATTCCATAATTGGCTTGA+TGG | - | chr1_2:75699669-75699688 | None:intergenic | 35.0% |
ATAGCTGTAGCAGAACTATT+TGG | + | chr1_2:75699743-75699762 | Msa0092920:CDS | 35.0% | |
CAATAATGGTGAAGAATGGA+TGG | + | chr1_2:75699769-75699788 | Msa0092920:CDS | 35.0% | |
ATCAGAGTGATATCTTCACT+TGG | + | chr1_2:75699975-75699994 | Msa0092920:three_prime_UTR | 35.0% | |
!!! | CGTTGTGGTAGTCTTGTTTT+CGG | - | chr1_2:75697272-75697291 | None:intergenic | 40.0% |
!! | TGTGACTTGTTCTGTTCTTG+TGG | - | chr1_2:75697322-75697341 | None:intergenic | 40.0% |
!! | GTGGTAGTTGATGGAAAAGA+TGG | + | chr1_2:75697360-75697379 | Msa0092920:exon | 40.0% |
AAGGCTTGTAAGAAGAACGA+AGG | - | chr1_2:75697504-75697523 | None:intergenic | 40.0% | |
GAAAGCTGAAGTTCAGAAGA+AGG | - | chr1_2:75697523-75697542 | None:intergenic | 40.0% | |
!! | ACATCAGTACTGACAGCAAT+AGG | - | chr1_2:75697671-75697690 | None:intergenic | 40.0% |
ACCTACCTCTTTCTTTAAGC+TGG | + | chr1_2:75697715-75697734 | Msa0092920:CDS | 40.0% | |
ACCAGCTTAAAGAAAGAGGT+AGG | - | chr1_2:75697719-75697738 | None:intergenic | 40.0% | |
ACGGTTTATGGACATGTCAT+AGG | + | chr1_2:75698084-75698103 | Msa0092920:intron | 40.0% | |
GTTTCATGGATGCAGTTTGT+TGG | + | chr1_2:75698289-75698308 | Msa0092920:intron | 40.0% | |
GAGAGATCAAACCTGAAAGA+TGG | + | chr1_2:75698472-75698491 | Msa0092920:CDS | 40.0% | |
GAACTGTATGACCATCTTTC+AGG | - | chr1_2:75698486-75698505 | None:intergenic | 40.0% | |
GGTCATACAGTTCTTGATGT+CGG | + | chr1_2:75698493-75698512 | Msa0092920:CDS | 40.0% | |
CTGGAACTGACTGTAATTCT+TGG | - | chr1_2:75698551-75698570 | None:intergenic | 40.0% | |
CAAGAATTACAGTCAGTTCC+AGG | + | chr1_2:75698549-75698568 | Msa0092920:intron | 40.0% | |
AACAAACAGCTCTTCTTGCA+TGG | + | chr1_2:75698699-75698718 | Msa0092920:intron | 40.0% | |
GTTCTTCATATGCTGTGTCA+TGG | - | chr1_2:75698962-75698981 | None:intergenic | 40.0% | |
GATATCCAACTGGATGAAAG+TGG | + | chr1_2:75699002-75699021 | Msa0092920:CDS | 40.0% | |
GAAGTTTACCTCAAAGTGGT+AGG | - | chr1_2:75699070-75699089 | None:intergenic | 40.0% | |
ACAAGATACTTCTTTACCGG+AGG | + | chr1_2:75699249-75699268 | Msa0092920:CDS | 40.0% | |
CGGTACTACTGCAATACTAT+TGG | - | chr1_2:75699352-75699371 | None:intergenic | 40.0% | |
! | TCAACCATTGGCTGGTAAAT+GGG | + | chr1_2:75699467-75699486 | Msa0092920:CDS | 40.0% |
CAATTCAGCATATTCCAACC+TGG | - | chr1_2:75699509-75699528 | None:intergenic | 40.0% | |
GACTTCCATCAAGCCAATTA+TGG | + | chr1_2:75699661-75699680 | Msa0092920:CDS | 40.0% | |
GCAAAGATTCAGCTACCAAA+TGG | + | chr1_2:75699696-75699715 | Msa0092920:CDS | 40.0% | |
GAAAACAGACCAATGCCAAA+TGG | + | chr1_2:75699997-75700016 | Msa0092920:three_prime_UTR | 40.0% | |
! | TCCTTTTGTGTCAACTACGA+CGG | - | chr1_2:75700023-75700042 | None:intergenic | 40.0% |
AAAGACACACACGTACGTTG+TGG | - | chr1_2:75697287-75697306 | None:intergenic | 45.0% | |
GTCACAGAAGTCAAGAAGTG+TGG | + | chr1_2:75697336-75697355 | Msa0092920:five_prime_UTR | 45.0% | |
! | AGAAGTCAAGAAGTGTGGTG+TGG | + | chr1_2:75697341-75697360 | Msa0092920:five_prime_UTR | 45.0% |
AAGTGTGGTGTGGTAGTTGA+TGG | + | chr1_2:75697351-75697370 | Msa0092920:exon | 45.0% | |
TGAACCAAGCATCAGCTTCA+CGG | - | chr1_2:75697416-75697435 | None:intergenic | 45.0% | |
! | ACTGATTCATCAAGGGTGTG+TGG | + | chr1_2:75697811-75697830 | Msa0092920:intron | 45.0% |
! | CTGATTCATCAAGGGTGTGT+GGG | + | chr1_2:75697812-75697831 | Msa0092920:intron | 45.0% |
GTGTGGGATGAATGAATGGT+AGG | + | chr1_2:75697828-75697847 | Msa0092920:intron | 45.0% | |
GTTCTGCCTAATAGTCTCAC+AGG | + | chr1_2:75698119-75698138 | Msa0092920:intron | 45.0% | |
CGAATATGGTGGTAGGGTAA+AGG | + | chr1_2:75698196-75698215 | Msa0092920:intron | 45.0% | |
CTCTTCTGCCTCAAAGACAT+TGG | + | chr1_2:75698414-75698433 | Msa0092920:CDS | 45.0% | |
TGCCTCAAAGACATTGGAAG+AGG | + | chr1_2:75698420-75698439 | Msa0092920:CDS | 45.0% | |
AGCCTCTTCCAATGTCTTTG+AGG | - | chr1_2:75698425-75698444 | None:intergenic | 45.0% | |
ACAGTTCTTGATGTCGGATG+CGG | + | chr1_2:75698499-75698518 | Msa0092920:CDS | 45.0% | |
ATTGCAGATTCCTGTAACCC+TGG | - | chr1_2:75698570-75698589 | None:intergenic | 45.0% | |
TCCAACTGGATGAAAGTGGA+TGG | + | chr1_2:75699006-75699025 | Msa0092920:CDS | 45.0% | |
AGTGGTAGGCAAATGCTTTG+TGG | - | chr1_2:75699056-75699075 | None:intergenic | 45.0% | |
AGCATTTGCCTACCACTTTG+AGG | + | chr1_2:75699059-75699078 | Msa0092920:CDS | 45.0% | |
TACTGTTGTCAACCATTGGC+TGG | + | chr1_2:75699459-75699478 | Msa0092920:CDS | 45.0% | |
! | GTCAACCATTGGCTGGTAAA+TGG | + | chr1_2:75699466-75699485 | Msa0092920:CDS | 45.0% |
GTTTCCCATTTACCAGCCAA+TGG | - | chr1_2:75699474-75699493 | None:intergenic | 45.0% | |
CGAAGAGTGGCTCAAAAGAA+TGG | + | chr1_2:75699628-75699647 | Msa0092920:CDS | 45.0% | |
!! | CTACCAAATGGACTGTCTAC+TGG | + | chr1_2:75699708-75699727 | Msa0092920:CDS | 45.0% |
TCTCCAGTAGACAGTCCATT+TGG | - | chr1_2:75699714-75699733 | None:intergenic | 45.0% | |
!! | AGCTTCACGGTGGTGTTGTA+AGG | - | chr1_2:75697403-75697422 | None:intergenic | 50.0% |
ACGTGTGAGTCTCCTGATGA+CGG | - | chr1_2:75697464-75697483 | None:intergenic | 50.0% | |
GGGTGTGTGGGATGAATGAA+TGG | + | chr1_2:75697824-75697843 | Msa0092920:intron | 50.0% | |
!! | CTCACAGGTGTTTTTGTCCG+TGG | + | chr1_2:75698134-75698153 | Msa0092920:intron | 50.0% |
TTCTTGATGTCGGATGCGGT+TGG | + | chr1_2:75698503-75698522 | Msa0092920:intron | 50.0% | |
TCTTGATGTCGGATGCGGTT+GGG | + | chr1_2:75698504-75698523 | Msa0092920:intron | 50.0% | |
ACAGTCAGTTCCAGGGTTAC+AGG | + | chr1_2:75698557-75698576 | Msa0092920:intron | 50.0% | |
! | TTTTTCACTGCCCCCTTGTC+AGG | + | chr1_2:75698773-75698792 | Msa0092920:intron | 50.0% |
! | TTTTCACTGCCCCCTTGTCA+GGG | + | chr1_2:75698774-75698793 | Msa0092920:intron | 50.0% |
GCCATCCACTTTCATCCAGT+TGG | - | chr1_2:75699010-75699029 | None:intergenic | 50.0% | |
GGAAACACTACGCACAAACC+AGG | + | chr1_2:75699488-75699507 | Msa0092920:CDS | 50.0% | |
ACACTACGCACAAACCAGGT+TGG | + | chr1_2:75699492-75699511 | Msa0092920:intron | 50.0% | |
TGTCAACTACGACGGCCATT+TGG | - | chr1_2:75700015-75700034 | None:intergenic | 50.0% | |
GCCGTCGTAGTTGACACAAA+AGG | + | chr1_2:75700019-75700038 | Msa0092920:three_prime_UTR | 50.0% | |
ACCACCGTGAAGCTGATGCT+TGG | + | chr1_2:75697409-75697428 | Msa0092920:CDS | 55.0% | |
ACCAAGCATCAGCTTCACGG+TGG | - | chr1_2:75697413-75697432 | None:intergenic | 55.0% | |
!! | GTCTCCTGATGACGGCATCA+GGG | - | chr1_2:75697456-75697475 | None:intergenic | 55.0% |
!! | AGTCTCCTGATGACGGCATC+AGG | - | chr1_2:75697457-75697476 | None:intergenic | 55.0% |
CTTGATGTCGGATGCGGTTG+GGG | + | chr1_2:75698505-75698524 | Msa0092920:intron | 55.0% | |
TTGATGTCGGATGCGGTTGG+GGG | + | chr1_2:75698506-75698525 | Msa0092920:intron | 55.0% | |
GGAGCTGCAGCTGCAAAATG+TGG | + | chr1_2:75698795-75698814 | Msa0092920:CDS | 55.0% | |
TGCTGCAGGCATAGTTCCTC+CGG | - | chr1_2:75699268-75699287 | None:intergenic | 55.0% | |
CTACGACGGCCATTTGGCAT+TGG | - | chr1_2:75700009-75700028 | None:intergenic | 55.0% | |
TGCTCCCTGATGCCGTCATC+AGG | + | chr1_2:75697449-75697468 | Msa0092920:CDS | 60.0% | |
AGCTGCAGCTCCCTGACAAG+GGG | - | chr1_2:75698787-75698806 | None:intergenic | 60.0% | |
CAGCTGCAGCTCCCTGACAA+GGG | - | chr1_2:75698788-75698807 | None:intergenic | 60.0% | |
GCTGCAGCTCCCTGACAAGG+GGG | - | chr1_2:75698786-75698805 | None:intergenic | 65.0% | |
GCAGCTGCAGCTCCCTGACA+AGG | - | chr1_2:75698789-75698808 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 75697241 | 75700126 | 75697241 | ID=Msa0092920;Name=Msa0092920 |
chr1_2 | mRNA | 75697241 | 75700126 | 75697241 | ID=Msa0092920-mRNA-1;Parent=Msa0092920;Name=Msa0092920-mRNA-1;_AED=0.15;_eAED=0.15;_QI=129|0.87|0.77|1|0.75|0.77|9|306|345 |
chr1_2 | exon | 75697241 | 75697565 | 75697241 | ID=Msa0092920-mRNA-1:exon:26646;Parent=Msa0092920-mRNA-1 |
chr1_2 | exon | 75697654 | 75697762 | 75697654 | ID=Msa0092920-mRNA-1:exon:26647;Parent=Msa0092920-mRNA-1 |
chr1_2 | exon | 75698402 | 75698520 | 75698402 | ID=Msa0092920-mRNA-1:exon:26648;Parent=Msa0092920-mRNA-1 |
chr1_2 | exon | 75698561 | 75698627 | 75698561 | ID=Msa0092920-mRNA-1:exon:26649;Parent=Msa0092920-mRNA-1 |
chr1_2 | exon | 75698795 | 75698894 | 75698795 | ID=Msa0092920-mRNA-1:exon:26650;Parent=Msa0092920-mRNA-1 |
chr1_2 | exon | 75698970 | 75699080 | 75698970 | ID=Msa0092920-mRNA-1:exon:26651;Parent=Msa0092920-mRNA-1 |
chr1_2 | exon | 75699225 | 75699308 | 75699225 | ID=Msa0092920-mRNA-1:exon:26652;Parent=Msa0092920-mRNA-1 |
chr1_2 | exon | 75699451 | 75699509 | 75699451 | ID=Msa0092920-mRNA-1:exon:26653;Parent=Msa0092920-mRNA-1 |
chr1_2 | exon | 75699628 | 75700126 | 75699628 | ID=Msa0092920-mRNA-1:exon:26654;Parent=Msa0092920-mRNA-1 |
chr1_2 | five_prime_UTR | 75697241 | 75697369 | 75697241 | ID=Msa0092920-mRNA-1:five_prime_utr;Parent=Msa0092920-mRNA-1 |
chr1_2 | CDS | 75697370 | 75697565 | 75697370 | ID=Msa0092920-mRNA-1:cds;Parent=Msa0092920-mRNA-1 |
chr1_2 | CDS | 75697654 | 75697762 | 75697654 | ID=Msa0092920-mRNA-1:cds;Parent=Msa0092920-mRNA-1 |
chr1_2 | CDS | 75698402 | 75698520 | 75698402 | ID=Msa0092920-mRNA-1:cds;Parent=Msa0092920-mRNA-1 |
chr1_2 | CDS | 75698561 | 75698627 | 75698561 | ID=Msa0092920-mRNA-1:cds;Parent=Msa0092920-mRNA-1 |
chr1_2 | CDS | 75698795 | 75698894 | 75698795 | ID=Msa0092920-mRNA-1:cds;Parent=Msa0092920-mRNA-1 |
chr1_2 | CDS | 75698970 | 75699080 | 75698970 | ID=Msa0092920-mRNA-1:cds;Parent=Msa0092920-mRNA-1 |
chr1_2 | CDS | 75699225 | 75699308 | 75699225 | ID=Msa0092920-mRNA-1:cds;Parent=Msa0092920-mRNA-1 |
chr1_2 | CDS | 75699451 | 75699509 | 75699451 | ID=Msa0092920-mRNA-1:cds;Parent=Msa0092920-mRNA-1 |
chr1_2 | CDS | 75699628 | 75699820 | 75699628 | ID=Msa0092920-mRNA-1:cds;Parent=Msa0092920-mRNA-1 |
chr1_2 | three_prime_UTR | 75699821 | 75700126 | 75699821 | ID=Msa0092920-mRNA-1:three_prime_utr;Parent=Msa0092920-mRNA-1 |
Gene Sequence |
Protein sequence |