Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344220 | QBS31917.1 | 98.795 | 83 | 1 | 0 | 1 | 83 | 11 | 93 | 3.60e-52 | 167 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344220 | sp|P69383|PSBE_SPIOL | 98.795 | 83 | 1 | 0 | 1 | 83 | 1 | 83 | 1.03e-54 | 166 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344220 | A0A822IN45 | 100.000 | 83 | 0 | 0 | 1 | 83 | 1 | 83 | 2.74e-52 | 167 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa0344220 | 0.846960 | 1.563744e-59 | -8.615850e-47 |
| Msa0002690 | Msa0344220 | 0.802409 | 5.689027e-49 | -8.615850e-47 |
| Msa0004180 | Msa0344220 | 0.833422 | 5.381318e-56 | -8.615850e-47 |
| Msa0011410 | Msa0344220 | 0.829862 | 4.058452e-55 | -8.615850e-47 |
| Msa0011440 | Msa0344220 | 0.827902 | 1.210162e-54 | -8.615850e-47 |
| Msa0011450 | Msa0344220 | 0.848121 | 7.499082e-60 | -8.615850e-47 |
| Msa0016380 | Msa0344220 | 0.801856 | 7.390629e-49 | -8.615850e-47 |
| Msa0017300 | Msa0344220 | 0.803711 | 3.060222e-49 | -8.615850e-47 |
| Msa0027020 | Msa0344220 | 0.824216 | 9.102213e-54 | -8.615850e-47 |
| Msa0032890 | Msa0344220 | 0.809123 | 2.210931e-50 | -8.615850e-47 |
| Msa0032930 | Msa0344220 | 0.816887 | 4.385472e-52 | -8.615850e-47 |
| Msa0042490 | Msa0344220 | 0.801496 | 8.762348e-49 | -8.615850e-47 |
| Msa0042950 | Msa0344220 | 0.817481 | 3.224253e-52 | -8.615850e-47 |
| Msa0044700 | Msa0344220 | 0.802736 | 4.869391e-49 | -8.615850e-47 |
| Msa0046020 | Msa0344220 | 0.819102 | 1.385502e-52 | -8.615850e-47 |
| Msa0047660 | Msa0344220 | 0.815036 | 1.135798e-51 | -8.615850e-47 |
| Msa0056230 | Msa0344220 | 0.806435 | 8.239066e-50 | -8.615850e-47 |
| Msa0065670 | Msa0344220 | 0.837256 | 5.788277e-57 | -8.615850e-47 |
| Msa0066890 | Msa0344220 | 0.823283 | 1.505408e-53 | -8.615850e-47 |
| Msa0069590 | Msa0344220 | 0.810724 | 9.996524e-51 | -8.615850e-47 |
| Msa0075820 | Msa0344220 | 0.801764 | 7.721025e-49 | -8.615850e-47 |
| Msa0077570 | Msa0344220 | 0.802638 | 5.102194e-49 | -8.615850e-47 |
| Msa0079580 | Msa0344220 | 0.801737 | 7.820110e-49 | -8.615850e-47 |
| Msa0089700 | Msa0344220 | 0.800224 | 1.593567e-48 | -8.615850e-47 |
| Msa0093360 | Msa0344220 | 0.815960 | 7.072099e-52 | -8.615850e-47 |
| Msa0094170 | Msa0344220 | 0.832978 | 6.941981e-56 | -8.615850e-47 |
| Msa0095160 | Msa0344220 | 0.886103 | 4.574666e-72 | -8.615850e-47 |
| Msa0095210 | Msa0344220 | 0.817175 | 3.779276e-52 | -8.615850e-47 |
| Msa0095220 | Msa0344220 | 0.859488 | 3.995323e-63 | -8.615850e-47 |
| Msa0095230 | Msa0344220 | 0.821273 | 4.406371e-53 | -8.615850e-47 |
| Msa0095280 | Msa0344220 | 0.821472 | 3.965323e-53 | -8.615850e-47 |
| Msa0095810 | Msa0344220 | 0.853526 | 2.253826e-61 | -8.615850e-47 |
| Msa0105140 | Msa0344220 | 0.820985 | 5.134575e-53 | -8.615850e-47 |
| Msa0111110 | Msa0344220 | 0.834889 | 2.308675e-56 | -8.615850e-47 |
| Msa0116780 | Msa0344220 | 0.819189 | 1.323493e-52 | -8.615850e-47 |
| Msa0120100 | Msa0344220 | 0.801964 | 7.023085e-49 | -8.615850e-47 |
| Msa0120160 | Msa0344220 | 0.808523 | 2.970969e-50 | -8.615850e-47 |
| Msa0124460 | Msa0344220 | 0.801922 | 7.164233e-49 | -8.615850e-47 |
| Msa0133140 | Msa0344220 | 0.824703 | 6.991398e-54 | -8.615850e-47 |
| Msa0145990 | Msa0344220 | 0.809712 | 1.652636e-50 | -8.615850e-47 |
| Msa0151380 | Msa0344220 | 0.827137 | 1.846879e-54 | -8.615850e-47 |
| Msa0151510 | Msa0344220 | 0.846513 | 2.071994e-59 | -8.615850e-47 |
| Msa0154880 | Msa0344220 | 0.841505 | 4.561912e-58 | -8.615850e-47 |
| Msa0154890 | Msa0344220 | 0.810163 | 1.321113e-50 | -8.615850e-47 |
| Msa0167160 | Msa0344220 | 0.825996 | 3.455736e-54 | -8.615850e-47 |
| Msa0167570 | Msa0344220 | 0.821598 | 3.708524e-53 | -8.615850e-47 |
| Msa0172280 | Msa0344220 | 0.826344 | 2.856697e-54 | -8.615850e-47 |
| Msa0173580 | Msa0344220 | 0.806795 | 6.915770e-50 | -8.615850e-47 |
| Msa0175240 | Msa0344220 | 0.808758 | 2.645638e-50 | -8.615850e-47 |
| Msa0178840 | Msa0344220 | 0.814510 | 1.485074e-51 | -8.615850e-47 |
| Msa0196580 | Msa0344220 | 0.805081 | 1.585541e-49 | -8.615850e-47 |
| Msa0221840 | Msa0344220 | 0.800737 | 1.252203e-48 | -8.615850e-47 |
| Msa0225190 | Msa0344220 | 0.845818 | 3.203114e-59 | -8.615850e-47 |
| Msa0225280 | Msa0344220 | 0.827711 | 1.345444e-54 | -8.615850e-47 |
| Msa0225790 | Msa0344220 | 0.828963 | 6.711720e-55 | -8.615850e-47 |
| Msa0253230 | Msa0344220 | 0.814022 | 1.903737e-51 | -8.615850e-47 |
| Msa0259450 | Msa0344220 | 0.800413 | 1.458546e-48 | -8.615850e-47 |
| Msa0259570 | Msa0344220 | 0.800434 | 1.443680e-48 | -8.615850e-47 |
| Msa0260580 | Msa0344220 | 0.834724 | 2.540509e-56 | -8.615850e-47 |
| Msa0260640 | Msa0344220 | 0.821308 | 4.325511e-53 | -8.615850e-47 |
| Msa0261020 | Msa0344220 | 0.803237 | 3.836101e-49 | -8.615850e-47 |
| Msa0261350 | Msa0344220 | 0.818200 | 2.218827e-52 | -8.615850e-47 |
| Msa0261660 | Msa0344220 | 0.808469 | 3.050798e-50 | -8.615850e-47 |
| Msa0262350 | Msa0344220 | 0.846438 | 2.171922e-59 | -8.615850e-47 |
| Msa0266330 | Msa0344220 | 0.834569 | 2.777720e-56 | -8.615850e-47 |
| Msa0268190 | Msa0344220 | 0.810863 | 9.328883e-51 | -8.615850e-47 |
| Msa0268200 | Msa0344220 | 0.889871 | 1.642937e-73 | -8.615850e-47 |
| Msa0268210 | Msa0344220 | 0.800779 | 1.227733e-48 | -8.615850e-47 |
| Msa0268350 | Msa0344220 | 0.827960 | 1.172189e-54 | -8.615850e-47 |
| Msa0268360 | Msa0344220 | 0.886957 | 2.175427e-72 | -8.615850e-47 |
| Msa0268370 | Msa0344220 | 0.808828 | 2.556878e-50 | -8.615850e-47 |
| Msa0268430 | Msa0344220 | 0.809172 | 2.157336e-50 | -8.615850e-47 |
| Msa0268440 | Msa0344220 | 0.886144 | 4.413797e-72 | -8.615850e-47 |
| Msa0268450 | Msa0344220 | 0.809943 | 1.473582e-50 | -8.615850e-47 |
| Msa0268510 | Msa0344220 | 0.825350 | 4.918360e-54 | -8.615850e-47 |
| Msa0268520 | Msa0344220 | 0.866427 | 2.874400e-65 | -8.615850e-47 |
| Msa0268530 | Msa0344220 | 0.813243 | 2.824608e-51 | -8.615850e-47 |
| Msa0268570 | Msa0344220 | 0.816918 | 4.316507e-52 | -8.615850e-47 |
| Msa0268660 | Msa0344220 | 0.820010 | 8.598426e-53 | -8.615850e-47 |
| Msa0268670 | Msa0344220 | 0.816138 | 6.453137e-52 | -8.615850e-47 |
| Msa0268710 | Msa0344220 | 0.879103 | 1.636934e-69 | -8.615850e-47 |
| Msa0268750 | Msa0344220 | 0.811821 | 5.779851e-51 | -8.615850e-47 |
| Msa0268860 | Msa0344220 | 0.800358 | 1.496120e-48 | -8.615850e-47 |
| Msa0268870 | Msa0344220 | 0.891676 | 3.196575e-74 | -8.615850e-47 |
| Msa0268880 | Msa0344220 | 0.832879 | 7.348228e-56 | -8.615850e-47 |
| Msa0268910 | Msa0344220 | 0.868618 | 5.709674e-66 | -8.615850e-47 |
| Msa0268920 | Msa0344220 | 0.811860 | 5.666988e-51 | -8.615850e-47 |
| Msa0269070 | Msa0344220 | 0.818269 | 2.140750e-52 | -8.615850e-47 |
| Msa0269080 | Msa0344220 | 0.874330 | 7.346110e-68 | -8.615850e-47 |
| Msa0269090 | Msa0344220 | 0.826007 | 3.434635e-54 | -8.615850e-47 |
| Msa0269610 | Msa0344220 | 0.817416 | 3.335709e-52 | -8.615850e-47 |
| Msa0275980 | Msa0344220 | 0.801726 | 7.859774e-49 | -8.615850e-47 |
| Msa0293060 | Msa0344220 | 0.821432 | 4.049717e-53 | -8.615850e-47 |
| Msa0293070 | Msa0344220 | 0.826245 | 3.015806e-54 | -8.615850e-47 |
| Msa0299130 | Msa0344220 | 0.826060 | 3.336355e-54 | -8.615850e-47 |
| Msa0299530 | Msa0344220 | 0.814289 | 1.661911e-51 | -8.615850e-47 |
| Msa0300130 | Msa0344220 | 0.828633 | 8.067064e-55 | -8.615850e-47 |
| Msa0305630 | Msa0344220 | 0.803316 | 3.695459e-49 | -8.615850e-47 |
| Msa0310270 | Msa0344220 | 0.816828 | 4.521896e-52 | -8.615850e-47 |
| Msa0317820 | Msa0344220 | 0.830718 | 2.507875e-55 | -8.615850e-47 |
| Msa0326170 | Msa0344220 | 0.803037 | 4.219204e-49 | -8.615850e-47 |
| Msa0329050 | Msa0344220 | 0.806296 | 8.813084e-50 | -8.615850e-47 |
| Msa0331070 | Msa0344220 | 0.806308 | 8.761046e-50 | -8.615850e-47 |
| Msa0337610 | Msa0344220 | 0.814299 | 1.653243e-51 | -8.615850e-47 |
| Msa0340700 | Msa0344220 | 0.820098 | 8.207035e-53 | -8.615850e-47 |
| Msa0341950 | Msa0344220 | 0.834014 | 3.827557e-56 | -8.615850e-47 |
| Msa0344210 | Msa0344220 | 0.804471 | 2.126274e-49 | -8.615850e-47 |
| Msa0344220 | Msa0344260 | 0.838957 | 2.111176e-57 | -8.615850e-47 |
| Msa0344220 | Msa0344270 | 0.859305 | 4.534351e-63 | -8.615850e-47 |
| Msa0344220 | Msa0344280 | 0.806844 | 6.750849e-50 | -8.615850e-47 |
| Msa0344220 | Msa0368450 | 0.804912 | 1.719990e-49 | -8.615850e-47 |
| Msa0344220 | Msa0369080 | 0.821267 | 4.421002e-53 | -8.615850e-47 |
| Msa0344220 | Msa0371010 | 0.800033 | 1.741968e-48 | -8.615850e-47 |
| Msa0344220 | Msa0378440 | 0.810133 | 1.341486e-50 | -8.615850e-47 |
| Msa0344220 | Msa0380450 | 0.812814 | 3.507964e-51 | -8.615850e-47 |
| Msa0344220 | Msa0386230 | 0.829859 | 4.065771e-55 | -8.615850e-47 |
| Msa0344220 | Msa0388070 | -0.802597 | 5.201220e-49 | -8.615850e-47 |
| Msa0344220 | Msa0404710 | 0.825416 | 4.743838e-54 | -8.615850e-47 |
| Msa0344220 | Msa0415760 | 0.813975 | 1.949171e-51 | -8.615850e-47 |
| Msa0344220 | Msa0416430 | 0.817139 | 3.850232e-52 | -8.615850e-47 |
| Msa0344220 | Msa0419150 | 0.813960 | 1.964944e-51 | -8.615850e-47 |
| Msa0344220 | Msa0424940 | 0.821850 | 3.242627e-53 | -8.615850e-47 |
| Msa0344220 | Msa0427230 | 0.805071 | 1.593471e-49 | -8.615850e-47 |
| Msa0344220 | Msa0427600 | 0.802267 | 6.083018e-49 | -8.615850e-47 |
| Msa0344220 | Msa0428270 | 0.811046 | 8.514800e-51 | -8.615850e-47 |
| Msa0344220 | Msa0429990 | 0.808101 | 3.654989e-50 | -8.615850e-47 |
| Msa0344220 | Msa0432490 | 0.809686 | 1.673404e-50 | -8.615850e-47 |
| Msa0344220 | Msa0436660 | 0.809555 | 1.785849e-50 | -8.615850e-47 |
| Msa0344220 | Msa0437820 | 0.817573 | 3.075193e-52 | -8.615850e-47 |
| Msa0344220 | Msa0449920 | 0.812928 | 3.312069e-51 | -8.615850e-47 |
| Msa0344220 | Msa0457600 | 0.803691 | 3.089589e-49 | -8.615850e-47 |
| Msa0344220 | Msa0460510 | 0.812821 | 3.495982e-51 | -8.615850e-47 |
| Msa0344220 | Msa0461620 | 0.821026 | 5.025576e-53 | -8.615850e-47 |
| Msa0344220 | Msa0462530 | 0.815904 | 7.278146e-52 | -8.615850e-47 |
| Msa0344220 | Msa0463030 | 0.818145 | 2.283615e-52 | -8.615850e-47 |
| Msa0344220 | Msa0464980 | 0.811984 | 5.325579e-51 | -8.615850e-47 |
| Msa0344220 | Msa0469770 | 0.809244 | 2.081993e-50 | -8.615850e-47 |
| Msa0344220 | Msa0473740 | 0.807080 | 6.018281e-50 | -8.615850e-47 |
| Msa0344220 | Msa0474630 | 0.806278 | 8.890330e-50 | -8.615850e-47 |
| Msa0344220 | Msa0474660 | 0.807516 | 4.865844e-50 | -8.615850e-47 |
| Msa0344220 | Msa0476890 | 0.820470 | 6.742836e-53 | -8.615850e-47 |
| Msa0344220 | Msa0483410 | 0.803596 | 3.233064e-49 | -8.615850e-47 |
| Msa0344220 | Msa0484590 | 0.812970 | 3.243350e-51 | -8.615850e-47 |
| Msa0344220 | Msa0490740 | 0.817485 | 3.218886e-52 | -8.615850e-47 |
| Msa0344220 | Msa0492330 | 0.802691 | 4.974570e-49 | -8.615850e-47 |
| Msa0344220 | Msa0500580 | 0.806850 | 6.734337e-50 | -8.615850e-47 |
| Msa0344220 | Msa0506700 | 0.832466 | 9.305639e-56 | -8.615850e-47 |
| Msa0344220 | Msa0507960 | 0.815657 | 8.260775e-52 | -8.615850e-47 |
| Msa0344220 | Msa0525180 | 0.815349 | 9.675610e-52 | -8.615850e-47 |
| Msa0344220 | Msa0544390 | 0.801114 | 1.048939e-48 | -8.615850e-47 |
| Msa0344220 | Msa0550980 | 0.818755 | 1.661338e-52 | -8.615850e-47 |
| Msa0344220 | Msa0550990 | 0.839688 | 1.363974e-57 | -8.615850e-47 |
| Msa0344220 | Msa0557440 | 0.820853 | 5.507552e-53 | -8.615850e-47 |
| Msa0344220 | Msa0565370 | 0.811292 | 7.531893e-51 | -8.615850e-47 |
| Msa0344220 | Msa0565430 | 0.809061 | 2.279241e-50 | -8.615850e-47 |
| Msa0344220 | Msa0580410 | 0.814394 | 1.575160e-51 | -8.615850e-47 |
| Msa0344220 | Msa0580890 | 0.822229 | 2.648322e-53 | -8.615850e-47 |
| Msa0344220 | Msa0582540 | 0.815145 | 1.073913e-51 | -8.615850e-47 |
| Msa0344220 | Msa0582550 | 0.872368 | 3.355806e-67 | -8.615850e-47 |
| Msa0344220 | Msa0582590 | 0.824785 | 6.687815e-54 | -8.615850e-47 |
| Msa0344220 | Msa0582600 | 0.867294 | 1.521350e-65 | -8.615850e-47 |
| Msa0344220 | Msa0582610 | 0.808074 | 3.702282e-50 | -8.615850e-47 |
| Msa0344220 | Msa0582650 | 0.814507 | 1.487514e-51 | -8.615850e-47 |
| Msa0344220 | Msa0582770 | 0.817570 | 3.079283e-52 | -8.615850e-47 |
| Msa0344220 | Msa0582840 | 0.802396 | 5.722298e-49 | -8.615850e-47 |
| Msa0344220 | Msa0582850 | 0.867654 | 1.166875e-65 | -8.615850e-47 |
| Msa0344220 | Msa0582860 | 0.804544 | 2.052630e-49 | -8.615850e-47 |
| Msa0344220 | Msa0582870 | 0.844523 | 7.172798e-59 | -8.615850e-47 |
| Msa0344220 | Msa0582880 | 0.890578 | 8.676930e-74 | -8.615850e-47 |
| Msa0344220 | Msa0582890 | 0.802129 | 6.496275e-49 | -8.615850e-47 |
| Msa0344220 | Msa0582920 | 0.810130 | 1.343456e-50 | -8.615850e-47 |
| Msa0344220 | Msa0583270 | 0.808970 | 2.384172e-50 | -8.615850e-47 |
| Msa0344220 | Msa0597370 | 0.818248 | 2.163811e-52 | -8.615850e-47 |
| Msa0344220 | Msa0605210 | 0.803235 | 3.840528e-49 | -8.615850e-47 |
| Msa0344220 | Msa0606340 | 0.820311 | 7.336180e-53 | -8.615850e-47 |
| Msa0344220 | Msa0606350 | 0.817730 | 2.833856e-52 | -8.615850e-47 |
| Msa0344220 | Msa0619450 | 0.801498 | 8.754382e-49 | -8.615850e-47 |
| Msa0344220 | Msa0619530 | 0.808197 | 3.486251e-50 | -8.615850e-47 |
| Msa0344220 | Msa0622450 | 0.811634 | 6.347156e-51 | -8.615850e-47 |
| Msa0344220 | Msa0646310 | 0.801036 | 1.088261e-48 | -8.615850e-47 |
| Msa0344220 | Msa0649160 | 0.803406 | 3.538920e-49 | -8.615850e-47 |
| Msa0344220 | Msa0654500 | 0.805698 | 1.177051e-49 | -8.615850e-47 |
| Msa0344220 | Msa0654850 | 0.808112 | 3.634309e-50 | -8.615850e-47 |
| Msa0344220 | Msa0656570 | 0.804622 | 1.977924e-49 | -8.615850e-47 |
| Msa0344220 | Msa0659580 | 0.803287 | 3.746752e-49 | -8.615850e-47 |
| Msa0344220 | Msa0661540 | 0.802939 | 4.422632e-49 | -8.615850e-47 |
| Msa0344220 | Msa0676570 | 0.833953 | 3.966069e-56 | -8.615850e-47 |
| Msa0344220 | Msa0681100 | 0.810897 | 9.173749e-51 | -8.615850e-47 |
| Msa0344220 | Msa0690100 | 0.819476 | 1.138380e-52 | -8.615850e-47 |
| Msa0344220 | Msa0694810 | 0.802512 | 5.416552e-49 | -8.615850e-47 |
| Msa0344220 | Msa0695250 | 0.829307 | 5.539832e-55 | -8.615850e-47 |
| Msa0344220 | Msa0698510 | 0.801946 | 7.082814e-49 | -8.615850e-47 |
| Msa0344220 | Msa0713570 | 0.804633 | 1.967384e-49 | -8.615850e-47 |
| Msa0344220 | Msa0719330 | 0.804265 | 2.347312e-49 | -8.615850e-47 |
| Msa0344220 | Msa0750200 | 0.825672 | 4.124748e-54 | -8.615850e-47 |
| Msa0344220 | Msa0755480 | 0.806110 | 9.643313e-50 | -8.615850e-47 |
| Msa0344220 | Msa0755550 | 0.806969 | 6.353161e-50 | -8.615850e-47 |
| Msa0344220 | Msa0766910 | 0.812741 | 3.639900e-51 | -8.615850e-47 |
| Msa0344220 | Msa0788450 | 0.831785 | 1.371282e-55 | -8.615850e-47 |
| Msa0344220 | Msa0793130 | 0.818889 | 1.548673e-52 | -8.615850e-47 |
| Msa0344220 | Msa0793530 | 0.802518 | 5.400170e-49 | -8.615850e-47 |
| Msa0344220 | Msa0794900 | 0.826041 | 3.372921e-54 | -8.615850e-47 |
| Msa0344220 | Msa0795910 | 0.816242 | 6.115918e-52 | -8.615850e-47 |
| Msa0344220 | Msa0820130 | 0.810353 | 1.202628e-50 | -8.615850e-47 |
| Msa0344220 | Msa0825570 | 0.831377 | 1.728364e-55 | -8.615850e-47 |
| Msa0344220 | Msa0826540 | 0.835800 | 1.358548e-56 | -8.615850e-47 |
| Msa0344220 | Msa0826820 | 0.807059 | 6.080784e-50 | -8.615850e-47 |
| Msa0344220 | Msa0829210 | 0.822018 | 2.964714e-53 | -8.615850e-47 |
| Msa0344220 | Msa0829250 | 0.809450 | 1.880718e-50 | -8.615850e-47 |
| Msa0344220 | Msa0833360 | 0.814486 | 1.503172e-51 | -8.615850e-47 |
| Msa0344220 | Msa0835050 | 0.804269 | 2.342540e-49 | -8.615850e-47 |
| Msa0344220 | Msa0838120 | 0.801581 | 8.415987e-49 | -8.615850e-47 |
| Msa0344220 | Msa0860630 | 0.805805 | 1.117999e-49 | -8.615850e-47 |
| Msa0344220 | Msa0864820 | 0.814959 | 1.181040e-51 | -8.615850e-47 |
| Msa0344220 | Msa0865500 | 0.804062 | 2.587447e-49 | -8.615850e-47 |
| Msa0344220 | Msa0866060 | 0.808423 | 3.119938e-50 | -8.615850e-47 |
| Msa0344220 | Msa0866310 | 0.807227 | 5.601687e-50 | -8.615850e-47 |
| Msa0344220 | Msa0868500 | 0.816336 | 5.828698e-52 | -8.615850e-47 |
| Msa0344220 | Msa0868510 | 0.814270 | 1.677737e-51 | -8.615850e-47 |
| Msa0344220 | Msa0868520 | 0.809927 | 1.485468e-50 | -8.615850e-47 |
| Msa0344220 | Msa0869420 | 0.826032 | 3.389506e-54 | -8.615850e-47 |
| Msa0344220 | Msa0882480 | 0.820576 | 6.377597e-53 | -8.615850e-47 |
| Msa0344220 | Msa0888520 | 0.822154 | 2.757375e-53 | -8.615850e-47 |
| Msa0344220 | Msa0919120 | 0.807921 | 3.991791e-50 | -8.615850e-47 |
| Msa0344220 | Msa0931160 | 0.804729 | 1.878291e-49 | -8.615850e-47 |
| Msa0344220 | Msa0931170 | 0.889221 | 2.940781e-73 | -8.615850e-47 |
| Msa0344220 | Msa0931180 | 0.858236 | 9.459654e-63 | -8.615850e-47 |
| Msa0344220 | Msa0931230 | 0.800475 | 1.416285e-48 | -8.615850e-47 |
| Msa0344220 | Msa0941420 | 0.808027 | 3.788576e-50 | -8.615850e-47 |
| Msa0344220 | Msa0945160 | 0.829807 | 4.186179e-55 | -8.615850e-47 |
| Msa0344220 | Msa0945520 | 0.803568 | 3.275763e-49 | -8.615850e-47 |
| Msa0344220 | Msa0958960 | 0.800819 | 1.205020e-48 | -8.615850e-47 |
| Msa0344220 | Msa0968060 | 0.801105 | 1.053249e-48 | -8.615850e-47 |
| Msa0344220 | Msa0971690 | 0.830750 | 2.463666e-55 | -8.615850e-47 |
| Msa0344220 | Msa0978540 | 0.808185 | 3.507189e-50 | -8.615850e-47 |
| Msa0344220 | Msa0978550 | 0.813852 | 2.074910e-51 | -8.615850e-47 |
| Msa0344220 | Msa0978560 | 0.805772 | 1.135742e-49 | -8.615850e-47 |
| Msa0344220 | Msa0983680 | 0.823658 | 1.230466e-53 | -8.615850e-47 |
| Msa0344220 | Msa0983690 | 0.876387 | 1.453556e-68 | -8.615850e-47 |
| Msa0344220 | Msa0984230 | 0.804758 | 1.852413e-49 | -8.615850e-47 |
| Msa0344220 | Msa1002550 | 0.829585 | 4.739748e-55 | -8.615850e-47 |
| Msa0344220 | Msa1028890 | 0.813824 | 2.104881e-51 | -8.615850e-47 |
| Msa0344220 | Msa1031190 | 0.827954 | 1.176194e-54 | -8.615850e-47 |
| Msa0344220 | Msa1044050 | 0.807355 | 5.263584e-50 | -8.615850e-47 |
| Msa0344220 | Msa1058550 | 0.820080 | 8.287074e-53 | -8.615850e-47 |
| Msa0344220 | Msa1068010 | 0.812673 | 3.766972e-51 | -8.615850e-47 |
| Msa0344220 | Msa1070370 | 0.827696 | 1.356486e-54 | -8.615850e-47 |
| Msa0344220 | Msa1086030 | 0.833044 | 6.684995e-56 | -8.615850e-47 |
| Msa0344220 | Msa1086040 | 0.888725 | 4.574960e-73 | -8.615850e-47 |
| Msa0344220 | Msa1086050 | 0.822859 | 1.890345e-53 | -8.615850e-47 |
| Msa0344220 | Msa1086090 | 0.803265 | 3.786228e-49 | -8.615850e-47 |
| Msa0344220 | Msa1086200 | 0.805132 | 1.547021e-49 | -8.615850e-47 |
| Msa0344220 | Msa1086300 | 0.800827 | 1.200716e-48 | -8.615850e-47 |
| Msa0344220 | Msa1086310 | 0.889363 | 2.589672e-73 | -8.615850e-47 |
| Msa0344220 | Msa1086320 | 0.807113 | 5.923249e-50 | -8.615850e-47 |
| Msa0344220 | Msa1086350 | 0.826917 | 2.085011e-54 | -8.615850e-47 |
| Msa0344220 | Msa1086360 | 0.801896 | 7.253657e-49 | -8.615850e-47 |
| Msa0344220 | Msa1086420 | 0.815019 | 1.145729e-51 | -8.615850e-47 |
| Msa0344220 | Msa1086430 | 0.812690 | 3.734819e-51 | -8.615850e-47 |
| Msa0344220 | Msa1086490 | 0.821845 | 3.251521e-53 | -8.615850e-47 |
| Msa0344220 | Msa1086500 | 0.875225 | 3.643367e-68 | -8.615850e-47 |
| Msa0344220 | Msa1086510 | 0.810362 | 1.197290e-50 | -8.615850e-47 |
| Msa0344220 | Msa1086640 | 0.811186 | 7.940932e-51 | -8.615850e-47 |
| Msa0344220 | Msa1086650 | 0.859891 | 3.021906e-63 | -8.615850e-47 |
| Msa0344220 | Msa1086670 | 0.844584 | 6.905360e-59 | -8.615850e-47 |
| Msa0344220 | Msa1086680 | 0.828111 | 1.078096e-54 | -8.615850e-47 |
| Msa0344220 | Msa1086840 | 0.835718 | 1.425312e-56 | -8.615850e-47 |
| Msa0344220 | Msa1086850 | 0.882335 | 1.136001e-70 | -8.615850e-47 |
| Msa0344220 | Msa1086860 | 0.803194 | 3.916526e-49 | -8.615850e-47 |
| Msa0344220 | Msa1086900 | 0.807482 | 4.947000e-50 | -8.615850e-47 |
| Msa0344220 | Msa1117770 | 0.812255 | 4.647773e-51 | -8.615850e-47 |
| Msa0344220 | Msa1119420 | 0.827990 | 1.152979e-54 | -8.615850e-47 |
| Msa0344220 | Msa1121720 | 0.807331 | 5.325987e-50 | -8.615850e-47 |
| Msa0344220 | Msa1129510 | 0.806401 | 8.374221e-50 | -8.615850e-47 |
| Msa0344220 | Msa1130150 | 0.845580 | 3.716372e-59 | -8.615850e-47 |
| Msa0344220 | Msa1132250 | 0.806949 | 6.417183e-50 | -8.615850e-47 |
| Msa0344220 | Msa1132880 | 0.815241 | 1.022463e-51 | -8.615850e-47 |
| Msa0344220 | Msa1144380 | 0.802937 | 4.426689e-49 | -8.615850e-47 |
| Msa0344220 | Msa1156100 | 0.823092 | 1.668472e-53 | -8.615850e-47 |
| Msa0344220 | Msa1156120 | 0.810328 | 1.217122e-50 | -8.615850e-47 |
| Msa0344220 | Msa1158180 | 0.826923 | 2.077827e-54 | -8.615850e-47 |
| Msa0344220 | Msa1175340 | 0.808435 | 3.102264e-50 | -8.615850e-47 |
| Msa0344220 | Msa1197740 | 0.803564 | 3.283043e-49 | -8.615850e-47 |
| Msa0344220 | Msa1199540 | 0.815537 | 8.788562e-52 | -8.615850e-47 |
| Msa0344220 | Msa1199700 | 0.817161 | 3.806941e-52 | -8.615850e-47 |
| Msa0344220 | Msa1203320 | 0.814096 | 1.833608e-51 | -8.615850e-47 |
| Msa0344220 | Msa1212150 | 0.829595 | 4.714241e-55 | -8.615850e-47 |
| Msa0344220 | Msa1212210 | 0.801794 | 7.611615e-49 | -8.615850e-47 |
| Msa0344220 | Msa1228260 | 0.803868 | 2.838363e-49 | -8.615850e-47 |
| Msa0344220 | Msa1235620 | 0.811838 | 5.729671e-51 | -8.615850e-47 |
| Msa0344220 | Msa1251440 | 0.805871 | 1.082658e-49 | -8.615850e-47 |
| Msa0344220 | Msa1266750 | 0.809451 | 1.879770e-50 | -8.615850e-47 |
| Msa0344220 | Msa1271220 | 0.801963 | 7.024923e-49 | -8.615850e-47 |
| Msa0344220 | Msa1279200 | 0.814215 | 1.725605e-51 | -8.615850e-47 |
| Msa0344220 | Msa1279250 | 0.807449 | 5.027288e-50 | -8.615850e-47 |
| Msa0344220 | Msa1287100 | 0.819936 | 8.937779e-53 | -8.615850e-47 |
| Msa0344220 | Msa1290090 | 0.800293 | 1.542590e-48 | -8.615850e-47 |
| Msa0344220 | Msa1291070 | 0.806675 | 7.331220e-50 | -8.615850e-47 |
| Msa0344220 | Msa1303690 | 0.823661 | 1.228520e-53 | -8.615850e-47 |
| Msa0344220 | Msa1328680 | 0.812925 | 3.316291e-51 | -8.615850e-47 |
| Msa0344220 | Msa1341710 | 0.822455 | 2.347214e-53 | -8.615850e-47 |
| Msa0344220 | Msa1342050 | 0.802373 | 5.784714e-49 | -8.615850e-47 |
| Msa0344220 | Msa1348180 | 0.804468 | 2.129737e-49 | -8.615850e-47 |
| Msa0344220 | Msa1350590 | 0.814859 | 1.243055e-51 | -8.615850e-47 |
| Msa0344220 | Msa1354320 | 0.802107 | 6.562298e-49 | -8.615850e-47 |
| Msa0344220 | Msa1354860 | 0.839459 | 1.564539e-57 | -8.615850e-47 |
| Msa0344220 | Msa1354870 | 0.888096 | 7.988380e-73 | -8.615850e-47 |
| Msa0344220 | Msa1354880 | 0.809343 | 1.982850e-50 | -8.615850e-47 |
| Msa0344220 | Msa1354920 | 0.803574 | 3.267320e-49 | -8.615850e-47 |
| Msa0344220 | Msa1355030 | 0.813607 | 2.349660e-51 | -8.615850e-47 |
| Msa0344220 | Msa1355040 | 0.885681 | 6.595481e-72 | -8.615850e-47 |
| Msa0344220 | Msa1355050 | 0.802767 | 4.799681e-49 | -8.615850e-47 |
| Msa0344220 | Msa1355090 | 0.809527 | 1.810699e-50 | -8.615850e-47 |
| Msa0344220 | Msa1356100 | 0.807511 | 4.876547e-50 | -8.615850e-47 |
| Msa0344220 | Msa1361580 | 0.806383 | 8.447225e-50 | -8.615850e-47 |
| Msa0344220 | Msa1363170 | 0.822784 | 1.967741e-53 | -8.615850e-47 |
| Msa0344220 | Msa1372460 | 0.818966 | 1.487433e-52 | -8.615850e-47 |
| Msa0344220 | Msa1373420 | 0.821669 | 3.571134e-53 | -8.615850e-47 |
| Msa0344220 | Msa1375650 | 0.802755 | 4.826463e-49 | -8.615850e-47 |
| Msa0344220 | Msa1380550 | 0.829563 | 4.800527e-55 | -8.615850e-47 |
| Msa0344220 | Msa1380560 | 0.868575 | 5.895615e-66 | -8.615850e-47 |
| Msa0344220 | Msa1386910 | 0.832128 | 1.127812e-55 | -8.615850e-47 |
| Msa0344220 | Msa1388030 | 0.802362 | 5.816992e-49 | -8.615850e-47 |
| Msa0344220 | Msa1394070 | 0.884880 | 1.314224e-71 | -8.615850e-47 |
| Msa0344220 | Msa1394110 | 0.805938 | 1.048475e-49 | -8.615850e-47 |
| Msa0344220 | Msa1394120 | 0.876329 | 1.522434e-68 | -8.615850e-47 |
| Msa0344220 | Msa1394160 | 0.805402 | 1.358051e-49 | -8.615850e-47 |
| Msa0344220 | Msa1394260 | 0.880568 | 4.930966e-70 | -8.615850e-47 |
| Msa0344220 | Msa1394270 | 0.829828 | 4.136731e-55 | -8.615850e-47 |
| Msa0344220 | Msa1395200 | 0.816884 | 4.393747e-52 | -8.615850e-47 |
| Msa0344220 | Msa1407160 | 0.816968 | 4.206272e-52 | -8.615850e-47 |
| Msa0344220 | Msa1408230 | 0.829506 | 4.956674e-55 | -8.615850e-47 |
| Msa0344220 | Msa1410480 | 0.825895 | 3.653017e-54 | -8.615850e-47 |
| Msa0344220 | Msa1410500 | 0.831864 | 1.310595e-55 | -8.615850e-47 |
| Msa0344220 | Msa1415510 | 0.828097 | 1.086403e-54 | -8.615850e-47 |
| Msa0344220 | Msa1423560 | 0.803041 | 4.212497e-49 | -8.615850e-47 |
| Msa0344220 | Msa1424490 | 0.821681 | 3.548117e-53 | -8.615850e-47 |
| Msa0344220 | Msa1432100 | 0.806010 | 1.012534e-49 | -8.615850e-47 |
| Msa0344220 | Msa1434860 | 0.812305 | 4.532175e-51 | -8.615850e-47 |
| Msa0344220 | Msa1439000 | 0.805961 | 1.036488e-49 | -8.615850e-47 |
| Msa0344220 | Msa1440140 | 0.820241 | 7.610796e-53 | -8.615850e-47 |
| Msa0344220 | Msa1444130 | 0.800502 | 1.398708e-48 | -8.615850e-47 |
| Msa0344220 | Msa1451200 | 0.812337 | 4.461013e-51 | -8.615850e-47 |
| Msa0344220 | Msa1452230 | 0.811108 | 8.256736e-51 | -8.615850e-47 |
| Msa0344220 | Msa1461840 | 0.811666 | 6.246448e-51 | -8.615850e-47 |
| Msa0344220 | Msa1462700 | 0.805210 | 1.490397e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344220 | MtrunA17_CPg0492821 | 100.000 | 83 | 0 | 0 | 1 | 83 | 1 | 83 | 5.28e-56 | 167 |
| Msa0344220 | MtrunA17_Chr4g0016851 | 100.000 | 83 | 0 | 0 | 1 | 83 | 1 | 83 | 5.28e-56 | 167 |
| Msa0344220 | MtrunA17_Chr4g0015751 | 100.000 | 83 | 0 | 0 | 1 | 83 | 1 | 83 | 5.28e-56 | 167 |
| Msa0344220 | MtrunA17_Chr4g0017011 | 97.468 | 79 | 2 | 0 | 1 | 79 | 1 | 79 | 4.69e-52 | 157 |
| Msa0344220 | MtrunA17_Chr5g0423051 | 98.684 | 76 | 1 | 0 | 1 | 76 | 1 | 76 | 1.14e-49 | 151 |
| Msa0344220 | MtrunA17_Chr6g0451331 | 94.737 | 38 | 2 | 0 | 24 | 61 | 41 | 78 | 2.48e-20 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344220 | ATCG00580.1 | 97.590 | 83 | 2 | 0 | 1 | 83 | 1 | 83 | 6.85e-55 | 164 |
Find 22 sgRNAs with CRISPR-Local
Find 22 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTTAGCTTACGATGTATT+TGG | 0.244623 | 3_1:-2717603 | Msa0344220:CDS |
| TCAAAACGGCCAGTTATTAA+TGG | 0.307608 | 3_1:+2717534 | None:intergenic |
| ATAACCAACCCGCAATGAAT+AGG | 0.348030 | 3_1:+2717637 | None:intergenic |
| TTATTACCAGTATTCGATAC+TGG | 0.348418 | 3_1:-2717686 | Msa0344220:CDS |
| TATGTGGAGCTCGGCATGTC+TGG | 0.349487 | 3_1:-2717738 | None:intergenic |
| ATACCCTCCCTATTCATTGC+GGG | 0.391873 | 3_1:-2717645 | Msa0344220:CDS |
| TAACCAACCCGCAATGAATA+GGG | 0.406851 | 3_1:+2717638 | None:intergenic |
| CTTTCTGTAAAATACTCGTT+TGG | 0.412027 | 3_1:+2717570 | None:intergenic |
| CAAGGAATTCCATTAATAAC+TGG | 0.412082 | 3_1:-2717543 | Msa0344220:CDS |
| AATAATCCAGTATCGAATAC+TGG | 0.423687 | 3_1:+2717680 | None:intergenic |
| TTATTAATGGAATTCCTTGT+CGG | 0.434610 | 3_1:+2717547 | None:intergenic |
| CTCGGCATGTCTGGAAGCAC+AGG | 0.508926 | 3_1:-2717729 | None:intergenic |
| GGTTGGTTATTTGTCAGCAC+GGG | 0.523918 | 3_1:-2717624 | Msa0344220:CDS |
| TGTAAAATACTCGTTTGGAC+GGG | 0.525534 | 3_1:+2717575 | None:intergenic |
| GTAAAATACTCGTTTGGACG+GGG | 0.531710 | 3_1:+2717576 | None:intergenic |
| GGGTTGGTTATTTGTCAGCA+CGG | 0.532372 | 3_1:-2717625 | Msa0344220:CDS |
| CCTCCCTATTCATTGCGGGT+TGG | 0.536548 | 3_1:-2717641 | Msa0344220:CDS |
| CTGTAAAATACTCGTTTGGA+CGG | 0.550313 | 3_1:+2717574 | None:intergenic |
| GTTGTTCCAAAGAATCAAAA+CGG | 0.551629 | 3_1:+2717520 | None:intergenic |
| TATACCCTCCCTATTCATTG+CGG | 0.586067 | 3_1:-2717646 | Msa0344220:CDS |
| CAACCCGCAATGAATAGGGA+GGG | 0.665638 | 3_1:+2717642 | None:intergenic |
| CCAACCCGCAATGAATAGGG+AGG | 0.678708 | 3_1:+2717641 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TTATTAATGGAATTCCTTGT+CGG | + | chr3_1:2717673-2717692 | None:intergenic | 25.0% |
| TTATTACCAGTATTCGATAC+TGG | - | chr3_1:2717531-2717550 | Msa0344220:CDS | 30.0% | |
| ! | AATAATCCAGTATCGAATAC+TGG | + | chr3_1:2717540-2717559 | None:intergenic | 30.0% |
| CTTTCTGTAAAATACTCGTT+TGG | + | chr3_1:2717650-2717669 | None:intergenic | 30.0% | |
| CAAGGAATTCCATTAATAAC+TGG | - | chr3_1:2717674-2717693 | Msa0344220:CDS | 30.0% | |
| GTTGTTCCAAAGAATCAAAA+CGG | + | chr3_1:2717700-2717719 | None:intergenic | 30.0% | |
| ! | GGTTTAGCTTACGATGTATT+TGG | - | chr3_1:2717614-2717633 | Msa0344220:CDS | 35.0% |
| TGTAAAATACTCGTTTGGAC+GGG | + | chr3_1:2717645-2717664 | None:intergenic | 35.0% | |
| CTGTAAAATACTCGTTTGGA+CGG | + | chr3_1:2717646-2717665 | None:intergenic | 35.0% | |
| ! | TATTTTACAGAAAGCCGACA+AGG | - | chr3_1:2717656-2717675 | Msa0344220:CDS | 35.0% |
| TCAAAACGGCCAGTTATTAA+TGG | + | chr3_1:2717686-2717705 | None:intergenic | 35.0% | |
| TATACCCTCCCTATTCATTG+CGG | - | chr3_1:2717571-2717590 | Msa0344220:CDS | 40.0% | |
| TAACCAACCCGCAATGAATA+GGG | + | chr3_1:2717582-2717601 | None:intergenic | 40.0% | |
| ATAACCAACCCGCAATGAAT+AGG | + | chr3_1:2717583-2717602 | None:intergenic | 40.0% | |
| GTAAAATACTCGTTTGGACG+GGG | + | chr3_1:2717644-2717663 | None:intergenic | 40.0% | |
| !!! | AACTGGCCGTTTTGATTCTT+TGG | - | chr3_1:2717691-2717710 | Msa0344220:CDS | 40.0% |
| ATACCCTCCCTATTCATTGC+GGG | - | chr3_1:2717572-2717591 | Msa0344220:CDS | 45.0% | |
| !! | GGGTTGGTTATTTGTCAGCA+CGG | - | chr3_1:2717592-2717611 | Msa0344220:CDS | 45.0% |
| ! | GGTTGGTTATTTGTCAGCAC+GGG | - | chr3_1:2717593-2717612 | Msa0344220:CDS | 45.0% |
| CAACCCGCAATGAATAGGGA+GGG | + | chr3_1:2717578-2717597 | None:intergenic | 50.0% | |
| CCAACCCGCAATGAATAGGG+AGG | + | chr3_1:2717579-2717598 | None:intergenic | 55.0% | |
| CCTCCCTATTCATTGCGGGT+TGG | - | chr3_1:2717576-2717595 | Msa0344220:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 2717494 | 2717745 | 2717494 | ID=Msa0344220;Name=Msa0344220 |
| chr3_1 | mRNA | 2717494 | 2717745 | 2717494 | ID=Msa0344220-mRNA-1;Parent=Msa0344220;Name=Msa0344220-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|83 |
| chr3_1 | exon | 2717494 | 2717745 | 2717494 | ID=Msa0344220-mRNA-1:exon:865;Parent=Msa0344220-mRNA-1 |
| chr3_1 | CDS | 2717494 | 2717745 | 2717494 | ID=Msa0344220-mRNA-1:cds;Parent=Msa0344220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
