AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1264660


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1264660 MtrunA17_Chr4g0073561 96.586 498 15 1 1 498 1 496 0.0 992
Msa1264660 MtrunA17_Chr4g0001981 48.156 488 185 10 51 498 60 519 3.97e-131 390
Msa1264660 MtrunA17_Chr1g0192751 42.396 217 109 5 56 267 42 247 2.32e-44 160
Msa1264660 MtrunA17_Chr4g0073591 81.690 71 13 0 120 190 14 84 1.58e-36 131
Msa1264660 MtrunA17_Chr6g0453721 38.926 149 80 3 110 256 50 189 9.93e-26 104
Msa1264660 MtrunA17_Chr6g0453841 34.756 164 81 4 110 256 50 204 2.46e-19 87.4
Msa1264660 MtrunA17_Chr4g0073601 66.038 53 18 0 446 498 6 58 2.15e-17 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1264660 AT2G24100.1 46.863 510 214 10 1 498 1 465 3.76e-131 389
Msa1264660 AT4G30780.1 50.990 404 139 12 1 360 1 389 4.30e-111 341
Msa1264660 AT4G30780.1 40.936 171 85 2 333 498 423 582 3.03e-20 94.4
Msa1264660 AT3G05770.2 41.364 220 114 6 48 257 17 231 1.10e-33 132
Msa1264660 AT3G05770.1 40.909 220 115 6 48 257 17 231 1.97e-33 131
Msa1264660 AT1G54300.1 43.671 158 79 4 109 257 2 158 1.28e-28 115

Find 136 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGATCCTCGATCTCAAATT+TGG 0.170910 8_2:+68196660 None:intergenic
GATATGTCAAACAAGAATTT+TGG 0.184107 8_2:+68192149 None:intergenic
TCATGTGAATTGGGCACTGC+TGG 0.262746 8_2:+68192338 None:intergenic
ATCCCCTGAAGCCATTTCTT+TGG 0.263985 8_2:+68192514 None:intergenic
TGCCACAATGTGTGCTTTCT+AGG 0.293917 8_2:+68195669 None:intergenic
TCAGAAGATTAGTCCCGATT+TGG 0.304438 8_2:-68192128 Msa1264660:exon
GAGGACTCGAGAGATGTTTA+TGG 0.319905 8_2:-68192251 Msa1264660:CDS
TTGCCAAACAGAAGCTTGTT+TGG 0.321183 8_2:-68195929 Msa1264660:CDS
CTTAATGAGCCTAGCCCTTT+GGG 0.327280 8_2:-68196276 Msa1264660:CDS
TAATGCCATCCATCATTTCT+TGG 0.333114 8_2:+68192462 None:intergenic
GGATCCTCGATCTCAAATTT+GGG 0.347298 8_2:+68196661 None:intergenic
ACTATCAACGAGACTCAAAA+TGG 0.348746 8_2:+68191952 None:intergenic
GACACTTTGTCAAGAGAATT+CGG 0.351718 8_2:-68196208 Msa1264660:CDS
TCATAGGAGGCACTAGCATT+TGG 0.352538 8_2:-68192055 Msa1264660:three_prime_UTR
GCCCTTTGGGTTTAAGTCTC+AGG 0.361134 8_2:-68196263 Msa1264660:CDS
GCCCGTGTTGTCATGTGAAT+TGG 0.371557 8_2:+68192328 None:intergenic
ACTTAATGAGCCTAGCCCTT+TGG 0.380538 8_2:-68196277 Msa1264660:CDS
AGTTCTTATATTACCTGAAC+TGG 0.384241 8_2:+68193266 None:intergenic
TTCCCAAACAAGCTTCTGTT+TGG 0.391805 8_2:+68195926 None:intergenic
TGTTTACCTTGTTAAACATC+CGG 0.392507 8_2:-68191908 Msa1264660:three_prime_UTR
AAGCCAACAGCCAGAGATAA+TGG 0.395009 8_2:-68193505 Msa1264660:CDS
CAGAAGATTAGTCCCGATTT+GGG 0.396073 8_2:-68192127 Msa1264660:exon
CTCCAATCTTTCAGCAGAAA+AGG 0.396852 8_2:+68192487 None:intergenic
GCATCACATTTCCAAAGAAA+TGG 0.397833 8_2:-68192525 Msa1264660:CDS
ATTTCCAAAGAAATGGCTTC+AGG 0.408201 8_2:-68192518 Msa1264660:CDS
ATACTCGTATTGCTTTGTTA+AGG 0.412443 8_2:-68191871 Msa1264660:three_prime_UTR
AGACGATTCCCATTGAGAAC+GGG 0.414818 8_2:+68196705 None:intergenic
TTCGCAGGGCACACTATCTA+AGG 0.416227 8_2:+68193299 None:intergenic
TGCCAAACAGAAGCTTGTTT+GGG 0.418118 8_2:-68195928 Msa1264660:CDS
TTCCTCGACATGCCTGGTGC+CGG 0.420662 8_2:+68192221 None:intergenic
ACATTCTGAAATTCCCAAAT+CGG 0.428571 8_2:+68192114 None:intergenic
AAATCGCTCATTGACATAGA+AGG 0.430459 8_2:+68192563 None:intergenic
TGATCCCTTTGAATCAGCTT+CGG 0.431254 8_2:+68192622 None:intergenic
CCTAAAGAAAAGAGGCTGTC+TGG 0.437486 8_2:+68195707 None:intergenic
AAAGATTGTGATTTGCATCA+AGG 0.438860 8_2:-68193426 Msa1264660:CDS
CATGTGAATTGGGCACTGCT+GGG 0.440357 8_2:+68192339 None:intergenic
GAAGCACCTTCCTCCAGTTC+AGG 0.441844 8_2:-68193279 Msa1264660:intron
ACTGGAGGAAGGTGCTTCGC+AGG 0.443629 8_2:+68193284 None:intergenic
CTAAGAATCCCCGTTCTCAA+TGG 0.462290 8_2:-68196714 Msa1264660:CDS
CGGTCGTAAATGATGGAGAC+AGG 0.464032 8_2:+68193346 None:intergenic
GAAATATGAAGGTGACTTAG+TGG 0.465278 8_2:-68195964 Msa1264660:CDS
CTTGTTTGGGAAGTTCTTGA+GGG 0.466937 8_2:-68195915 Msa1264660:CDS
TGGGATCAAATAAAACTGCC+TGG 0.467087 8_2:-68192593 Msa1264660:CDS
GACAACACGGGCTCTATTGA+AGG 0.467111 8_2:-68192317 Msa1264660:CDS
AGAGAATTAAATTACCACTA+AGG 0.468718 8_2:+68195806 None:intergenic
GGCTTTAAGTTGACTGATGT+CGG 0.472338 8_2:+68195860 None:intergenic
TTGTTAAACATCCGGGTATG+TGG 0.473649 8_2:-68191900 Msa1264660:three_prime_UTR
AGGTCCATCATCAGGACAAT+TGG 0.475804 8_2:+68195839 None:intergenic
AAAAGTCAACATAGATATCA+AGG 0.479802 8_2:-68192282 Msa1264660:CDS
CTGTGCTCGGTCGTAAATGA+TGG 0.481540 8_2:+68193339 None:intergenic
TCTACGCTGTCTCTTACAAA+TGG 0.481679 8_2:-68192366 Msa1264660:CDS
AGGAGCATGTTGATCTTGAA+TGG 0.481866 8_2:+68196639 None:intergenic
CCCGTGTTGTCATGTGAATT+GGG 0.482809 8_2:+68192329 None:intergenic
TAAGAATCCCCGTTCTCAAT+GGG 0.488381 8_2:-68196713 Msa1264660:CDS
ATGTGAATTGGGCACTGCTG+GGG 0.492111 8_2:+68192340 None:intergenic
TCGTATTGCTTTGTTAAGGA+TGG 0.493485 8_2:-68191867 Msa1264660:three_prime_UTR
ATGCAAAACCCTAACGGAAA+AGG 0.495498 8_2:+68196799 None:intergenic
ACCTAGCACATTGACCTTAG+TGG 0.495667 8_2:-68195820 Msa1264660:intron
AGACTTAAACCCAAAGGGCT+AGG 0.496309 8_2:+68196267 None:intergenic
ACATCTGCTTAACGACAATC+AGG 0.501367 8_2:-68192435 Msa1264660:CDS
AGATGTTTATGGTGGCAATC+CGG 0.504171 8_2:-68192240 Msa1264660:CDS
GGTAAACATAGTTTACTTGA+AGG 0.505009 8_2:+68191923 None:intergenic
TTTCCAAAGAAATGGCTTCA+GGG 0.505175 8_2:-68192517 Msa1264660:CDS
AGTGAATCAACCATTATCTC+TGG 0.506506 8_2:+68193495 None:intergenic
TTTATTGGTAATGTTAAGGA+TGG 0.508236 8_2:-68191825 Msa1264660:three_prime_UTR
AAAGCCAATTGTCCTGATGA+TGG 0.508417 8_2:-68195843 Msa1264660:CDS
GAGTCTTTCCTCGACATGCC+TGG 0.511707 8_2:+68192215 None:intergenic
CATTCTGAAATTCCCAAATC+GGG 0.512987 8_2:+68192115 None:intergenic
GCTTGTTTGGGAAGTTCTTG+AGG 0.513290 8_2:-68195916 Msa1264660:CDS
GACATAGAAGGACGGAGCCC+AGG 0.513305 8_2:+68192575 None:intergenic
TGTGAATTGGGCACTGCTGG+GGG 0.513353 8_2:+68192341 None:intergenic
ATGTCGAGGAAAGACTCATT+TGG 0.515569 8_2:-68192209 Msa1264660:CDS
ATTGGAGTACCAAGAAATGA+TGG 0.518306 8_2:-68192471 Msa1264660:CDS
AAAGTAAAATAGAAATTCAA+TGG 0.524135 8_2:-68195884 Msa1264660:CDS
TCCTGAGACTTAAACCCAAA+GGG 0.525740 8_2:+68196262 None:intergenic
TTGCATCAAGGCAAGGGCAA+TGG 0.532360 8_2:-68193414 Msa1264660:CDS
AATGTGTGCTTTCTAGGTTG+AGG 0.532693 8_2:+68195675 None:intergenic
CAGTATAAATCGAAATATGA+AGG 0.533390 8_2:-68195975 Msa1264660:CDS
AAGAATATACCTATGTGTGC+TGG 0.533619 8_2:+68195617 None:intergenic
TTTGGAAGAGATGCAATTCG+AGG 0.535660 8_2:+68192167 None:intergenic
GTTTACCTTGTTAAACATCC+GGG 0.535898 8_2:-68191907 Msa1264660:three_prime_UTR
ACTTAAGACGGTCGTTACAC+TGG 0.536403 8_2:+68193532 None:intergenic
TTGTGATTTGCATCAAGGCA+AGG 0.538238 8_2:-68193421 Msa1264660:CDS
GGAGCATGTTGATCTTGAAT+GGG 0.540041 8_2:+68196640 None:intergenic
ATTCAAAGGGATCAAGACAC+TGG 0.540745 8_2:-68192613 Msa1264660:CDS
TGCTTCAGTTGAAAAGCTGA+AGG 0.545025 8_2:-68196130 Msa1264660:CDS
GATGGAGACAGGGATGAATG+AGG 0.546725 8_2:+68193357 None:intergenic
TAATTCCGAAGCTGATTCAA+AGG 0.548618 8_2:-68192627 Msa1264660:CDS
TATGGTGGCAATCCGGCACC+AGG 0.548784 8_2:-68192233 Msa1264660:CDS
CAACCATTATCTCTGGCTGT+TGG 0.549994 8_2:+68193502 None:intergenic
TTCCAAAGAAATGGCTTCAG+GGG 0.550738 8_2:-68192516 Msa1264660:CDS
TGTGATTTGCATCAAGGCAA+GGG 0.551177 8_2:-68193420 Msa1264660:CDS
ATGTGTGCTGGCCTGTCCAC+CGG 0.553837 8_2:+68195629 None:intergenic
AATGTGCTAGGTCCATCATC+AGG 0.555133 8_2:+68195831 None:intergenic
TGTATCAAATCTAACAGCGA+AGG 0.555578 8_2:+68196234 None:intergenic
TTAGTCTCCCTAAAGAAAAG+AGG 0.560643 8_2:+68195699 None:intergenic
AGCAGAAGGATCACTGTGCT+CGG 0.561280 8_2:+68193326 None:intergenic
CCATCAAAATTTAGAGTCAA+CGG 0.566227 8_2:+68196752 None:intergenic
GGGATCAAATAAAACTGCCT+GGG 0.569804 8_2:-68192592 Msa1264660:CDS
AAGACGATTCCCATTGAGAA+CGG 0.569958 8_2:+68196704 None:intergenic
AATTCCGAAGCTGATTCAAA+GGG 0.570296 8_2:-68192626 Msa1264660:CDS
GGAAAAGGACGTGAAGGAGA+AGG 0.573747 8_2:+68196814 None:intergenic
CTGGAGGAAGGTGCTTCGCA+GGG 0.580583 8_2:+68193285 None:intergenic
TCTTATATTACCTGAACTGG+AGG 0.586999 8_2:+68193269 None:intergenic
TTCTCAATAGCAGCGGATCG+TGG 0.587619 8_2:+68193462 None:intergenic
ATATTACCTGAACTGGAGGA+AGG 0.594740 8_2:+68193273 None:intergenic
AATCTTTCAGCAGAAAAGGA+AGG 0.598358 8_2:+68192491 None:intergenic
ACCACTAAGGTCAATGTGCT+AGG 0.600691 8_2:+68195819 None:intergenic
GCCCAATTCACATGACAACA+CGG 0.601317 8_2:-68192330 Msa1264660:CDS
GAAAAGGACGTGAAGGAGAA+GGG 0.601910 8_2:+68196815 None:intergenic
GACGATTCCCATTGAGAACG+GGG 0.602790 8_2:+68196706 None:intergenic
GATCCTCGATCTCAAATTTG+GGG 0.605147 8_2:+68196662 None:intergenic
ACTTTGTGACGCTTGTTGAG+AGG 0.605272 8_2:+68196619 None:intergenic
TTCCTGAGACTTAAACCCAA+AGG 0.606349 8_2:+68196261 None:intergenic
AGATATCAAGGCTACTGAAG+AGG 0.606877 8_2:-68192270 Msa1264660:CDS
AACAGAATGCAAAACCCTAA+CGG 0.610835 8_2:+68196793 None:intergenic
CTATCTAAGGTAATAGCAGA+AGG 0.611346 8_2:+68193312 None:intergenic
GTATCAAATCTAACAGCGAA+GGG 0.619004 8_2:+68196235 None:intergenic
CGCTCATTGACATAGAAGGA+CGG 0.621047 8_2:+68192567 None:intergenic
GAGTACCAAGAAATGATGGA+TGG 0.630044 8_2:-68192467 Msa1264660:CDS
TTCAAAGGGATCAAGACACT+GGG 0.632188 8_2:-68192612 Msa1264660:CDS
CCTAACGGAAAAGGACGTGA+AGG 0.637569 8_2:+68196808 None:intergenic
TCCCATGTTCTGAAAACGAG+AGG 0.639975 8_2:+68193383 None:intergenic
TTTAAACTCTAAAGCAAACA+AGG 0.644174 8_2:-68196160 Msa1264660:CDS
GTCAACGGAGAAGAAATCGA+AGG 0.648412 8_2:+68196767 None:intergenic
GGTCGTAAATGATGGAGACA+GGG 0.654834 8_2:+68193347 None:intergenic
GTGGACAGGCCAGCACACAT+AGG 0.655241 8_2:-68195626 Msa1264660:intron
GACTCGAGAGATGTTTATGG+TGG 0.656722 8_2:-68192248 Msa1264660:CDS
CCCAATTCACATGACAACAC+GGG 0.664172 8_2:-68192329 Msa1264660:CDS
ATCCTCGATCTCAAATTTGG+GGG 0.664332 8_2:+68196663 None:intergenic
GTTGGCTTAAGAACTTAAGA+CGG 0.666748 8_2:+68193520 None:intergenic
GTGAGGGTTCTCAATAGCAG+CGG 0.669144 8_2:+68193455 None:intergenic
ACATACCCGGATGTTTAACA+AGG 0.690588 8_2:+68191902 None:intergenic
AACCTAGAAAGCACACATTG+TGG 0.694172 8_2:-68195671 Msa1264660:CDS
AGTATCGAAATCCACATACC+CGG 0.706310 8_2:+68191889 None:intergenic
TGGAAATGTGATGCTCAATG+TGG 0.744777 8_2:+68192534 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATGTTTACTTTTATTT+TGG - chr8_2:68192294-68192313 Msa1264660:CDS 10.0%
!!! ATAATGTTTACTTTTATTTT+GGG - chr8_2:68192295-68192314 Msa1264660:CDS 10.0%
!! TTCTATTAAGATTTATTTAT+TGG - chr8_2:68193356-68193375 Msa1264660:CDS 10.0%
!! TCTATTAAGATTTATTTATT+GGG - chr8_2:68193357-68193376 Msa1264660:CDS 10.0%
!! TTTCATTTAAATGTAAAAAA+AGG - chr8_2:68193845-68193864 Msa1264660:intron 10.0%
!! AAATTATCATTAGAAAAAAT+TGG - chr8_2:68194340-68194359 Msa1264660:intron 10.0%
!! AATTATCATTAGAAAAAATT+GGG - chr8_2:68194341-68194360 Msa1264660:intron 10.0%
!!! CTTTTTATTTATAGTTTAAT+AGG - chr8_2:68194808-68194827 Msa1264660:intron 10.0%
!!! GTTTTTTAACTTTTTTTTAT+TGG - chr8_2:68196812-68196831 Msa1264660:five_prime_UTR 10.0%
!! AAAGTAAAATAGAAATTCAA+TGG - chr8_2:68192768-68192787 Msa1264660:intron 15.0%
!! TAAATCTATATGATTATGAA+TGG + chr8_2:68193105-68193124 None:intergenic 15.0%
!!! TAAAAGTACATTAATTTTGT+TGG - chr8_2:68193123-68193142 Msa1264660:intron 15.0%
!!! AATCTCTAATATTTTACATA+GGG + chr8_2:68193185-68193204 None:intergenic 15.0%
!! ACCTTAAAAAAAATTACAAA+AGG - chr8_2:68193451-68193470 Msa1264660:CDS 15.0%
!!! ACCTTTTGTAATTTTTTTTA+AGG + chr8_2:68193455-68193474 None:intergenic 15.0%
!! TGAATTAAAATTAATGTTCA+GGG + chr8_2:68193732-68193751 None:intergenic 15.0%
!! TAAAATAACAGAAATTAGTT+GGG + chr8_2:68193818-68193837 None:intergenic 15.0%
!! TTAAAATAACAGAAATTAGT+TGG + chr8_2:68193819-68193838 None:intergenic 15.0%
!!! ATTCAATTTTTACTAAACTT+AGG - chr8_2:68194047-68194066 Msa1264660:intron 15.0%
!!! TTCAATTTTTACTAAACTTA+GGG - chr8_2:68194048-68194067 Msa1264660:intron 15.0%
!!! AATTGATAATACTTTTAATG+CGG - chr8_2:68194473-68194492 Msa1264660:intron 15.0%
!!! TATTTTACTGATATTTTACT+TGG + chr8_2:68195685-68195704 None:intergenic 15.0%
!!! TTAATTTTTTTCTTCTTCAT+AGG - chr8_2:68196581-68196600 Msa1264660:intron 15.0%
!!! ATTATTTTAATGAAGAATCT+TGG - chr8_2:68196622-68196641 Msa1264660:CDS 15.0%
!!! TTTTTTTATTGGTAATGTTA+AGG - chr8_2:68196823-68196842 Msa1264660:five_prime_UTR 15.0%
!! ACCATAATTAATGAGAAAAA+GGG + chr8_2:68192325-68192344 None:intergenic 20.0%
!! AACCATAATTAATGAGAAAA+AGG + chr8_2:68192326-68192345 None:intergenic 20.0%
!!! ACATTTAAAAATTGGTTCAT+GGG - chr8_2:68192564-68192583 Msa1264660:CDS 20.0%
!!! ATCTCTAATATTTTACATAG+GGG + chr8_2:68193184-68193203 None:intergenic 20.0%
!!! CAATCTCTAATATTTTACAT+AGG + chr8_2:68193186-68193205 None:intergenic 20.0%
!!! ATTAGAGATTGATTTTCAAA+TGG - chr8_2:68193195-68193214 Msa1264660:intron 20.0%
!!! TTAGAGATTGATTTTCAAAT+GGG - chr8_2:68193196-68193215 Msa1264660:intron 20.0%
!!! ACTTATTTCTTCTTCTTTTT+CGG - chr8_2:68193691-68193710 Msa1264660:intron 20.0%
!! GTGAATTAAAATTAATGTTC+AGG + chr8_2:68193733-68193752 None:intergenic 20.0%
!! AAACTTGACCAAATAAATAA+GGG + chr8_2:68194146-68194165 None:intergenic 20.0%
!! TAAACTTGACCAAATAAATA+AGG + chr8_2:68194147-68194166 None:intergenic 20.0%
!!! ATTTTTTACTTTGCATTGTT+TGG - chr8_2:68194169-68194188 Msa1264660:intron 20.0%
!! TTTATAGTTTAATAGGGTTA+TGG - chr8_2:68194815-68194834 Msa1264660:intron 20.0%
!!! TCATATTTTCAATAATGCTA+TGG - chr8_2:68194851-68194870 Msa1264660:intron 20.0%
!!! ATTTTGATTGTGTTACATAA+GGG - chr8_2:68195417-68195436 Msa1264660:intron 20.0%
!! AATGATTGAAAACTTATCAA+TGG - chr8_2:68195522-68195541 Msa1264660:intron 20.0%
!!! TCTTCTAAAATTTGTCAAAT+GGG - chr8_2:68195751-68195770 Msa1264660:intron 20.0%
!! CCAAAACACATTAATAAATA+AGG + chr8_2:68195960-68195979 None:intergenic 20.0%
!!! CCTTATTTATTAATGTGTTT+TGG - chr8_2:68195957-68195976 Msa1264660:CDS 20.0%
!! TCCCTTTTTCTCATTAATTA+TGG - chr8_2:68192321-68192340 Msa1264660:CDS 25.0%
!!! TTTAAACTCTAAAGCAAACA+AGG - chr8_2:68192492-68192511 Msa1264660:CDS 25.0%
!! CAATTTTTAAATGTGTAGCT+GGG + chr8_2:68192558-68192577 None:intergenic 25.0%
!! CACATTTAAAAATTGGTTCA+TGG - chr8_2:68192563-68192582 Msa1264660:CDS 25.0%
! CAGTATAAATCGAAATATGA+AGG - chr8_2:68192677-68192696 Msa1264660:intron 25.0%
! AGAGAATTAAATTACCACTA+AGG + chr8_2:68192849-68192868 None:intergenic 25.0%
! ATTCATAAATCATTGAACAC+AGG + chr8_2:68192904-68192923 None:intergenic 25.0%
!!! TAATTTGCTTATAGTATCTG+TGG - chr8_2:68193290-68193309 Msa1264660:CDS 25.0%
! TTATAGTATCTGTGGAATTT+AGG - chr8_2:68193298-68193317 Msa1264660:CDS 25.0%
!!! TATTTTTAGGGTCCATATTA+GGG + chr8_2:68193386-68193405 None:intergenic 25.0%
!!! TTATTTTTAGGGTCCATATT+AGG + chr8_2:68193387-68193406 None:intergenic 25.0%
! AATATGGACCCTAAAAATAA+AGG - chr8_2:68193387-68193406 Msa1264660:CDS 25.0%
!! TCTATGTAGAAAATTTTCGA+TGG + chr8_2:68193591-68193610 None:intergenic 25.0%
! AATTTATGTGCAAAATGCAA+TGG + chr8_2:68193647-68193666 None:intergenic 25.0%
!! TTTTGCACATAAATTTTCTC+TGG - chr8_2:68193652-68193671 Msa1264660:intron 25.0%
! AATATGGACCTCAAAAATAA+AGG + chr8_2:68194116-68194135 None:intergenic 25.0%
!!! TTATTTTTGAGGTCCATATT+AGG - chr8_2:68194116-68194135 Msa1264660:intron 25.0%
!!! TATTTTTGAGGTCCATATTA+GGG - chr8_2:68194117-68194136 Msa1264660:intron 25.0%
!!! AGCTATTTTACTTCAAATCA+GGG + chr8_2:68194444-68194463 None:intergenic 25.0%
! GAGTTCCTAATAAAATTCAA+CGG - chr8_2:68194515-68194534 Msa1264660:intron 25.0%
!! TAGTACCGTTGAATTTTATT+AGG + chr8_2:68194523-68194542 None:intergenic 25.0%
! TAATAAAATTCAACGGTACT+AGG - chr8_2:68194522-68194541 Msa1264660:intron 25.0%
!!! GTTTTTGCAATACATTGATT+TGG - chr8_2:68194621-68194640 Msa1264660:intron 25.0%
!!! AGTTGAGTTTAGTCTTTTTA+AGG - chr8_2:68194688-68194707 Msa1264660:intron 25.0%
! GAAGTTATAAAATCACAAGA+TGG + chr8_2:68195040-68195059 None:intergenic 25.0%
!! CTTGTGATTTTATAACTTCT+AGG - chr8_2:68195041-68195060 Msa1264660:intron 25.0%
!!! GATTTTGATTGTGTTACATA+AGG - chr8_2:68195416-68195435 Msa1264660:intron 25.0%
!!! TTTTGATTGTGTTACATAAG+GGG - chr8_2:68195418-68195437 Msa1264660:intron 25.0%
! ATTAGTTCAGTTGAAGTTTA+TGG + chr8_2:68195644-68195663 None:intergenic 25.0%
! ATTTCATAATCTATGCTTCT+TGG + chr8_2:68195729-68195748 None:intergenic 25.0%
!!! CTCTTCTAAAATTTGTCAAA+TGG - chr8_2:68195750-68195769 Msa1264660:intron 25.0%
!!! TGTTGAATATTGTTTTTCCT+CGG - chr8_2:68195861-68195880 Msa1264660:CDS 25.0%
!! TGACATAAGTGATTTTTCAT+CGG + chr8_2:68196255-68196274 None:intergenic 25.0%
! ATGAAAAATCACTTATGTCA+AGG - chr8_2:68196255-68196274 Msa1264660:CDS 25.0%
! TGAAAAATCACTTATGTCAA+GGG - chr8_2:68196256-68196275 Msa1264660:CDS 25.0%
! AAAAGTCAACATAGATATCA+AGG - chr8_2:68196370-68196389 Msa1264660:intron 25.0%
!! GATATGTCAAACAAGAATTT+TGG + chr8_2:68196506-68196525 None:intergenic 25.0%
!!! ATTTTTTTCTTCTTCATAGG+AGG - chr8_2:68196584-68196603 Msa1264660:intron 25.0%
!!! TTTATTGGTAATGTTAAGGA+TGG - chr8_2:68196827-68196846 Msa1264660:five_prime_UTR 25.0%
! CCATCAAAATTTAGAGTCAA+CGG + chr8_2:68191903-68191922 None:intergenic 30.0%
!! GACTCTAAATTTTGATGGTT+CGG - chr8_2:68191905-68191924 Msa1264660:three_prime_UTR 30.0%
!!! AATTTTGATGGTTCGGTTTA+TGG - chr8_2:68191912-68191931 Msa1264660:three_prime_UTR 30.0%
!!! ATTTTGATGGTTCGGTTTAT+GGG - chr8_2:68191913-68191932 Msa1264660:three_prime_UTR 30.0%
!!! TATGGTTTTGCGTTTTGTTT+AGG - chr8_2:68192339-68192358 Msa1264660:CDS 30.0%
! CCAATTTTTAAATGTGTAGC+TGG + chr8_2:68192559-68192578 None:intergenic 30.0%
CCAGCTACACATTTAAAAAT+TGG - chr8_2:68192556-68192575 Msa1264660:CDS 30.0%
! TTTAAAAATTGGTTCATGGG+AGG - chr8_2:68192567-68192586 Msa1264660:CDS 30.0%
TGAATGATATTGTGAATTGC+AGG - chr8_2:68192919-68192938 Msa1264660:intron 30.0%
!! ATAACTTGTTGAAATCGTTG+AGG - chr8_2:68193251-68193270 Msa1264660:intron 30.0%
GAAATGCTTGTGTACAAAAA+AGG + chr8_2:68193329-68193348 None:intergenic 30.0%
TTGTAGTAGGTAATATGTAC+AGG + chr8_2:68193425-68193444 None:intergenic 30.0%
TACATATTACCTACTACAAC+AGG - chr8_2:68193426-68193445 Msa1264660:CDS 30.0%
AATTACAAAAGGTTAGAGCA+AGG - chr8_2:68193462-68193481 Msa1264660:CDS 30.0%
TCTACATAGATCTATGATGT+TGG - chr8_2:68193601-68193620 Msa1264660:intron 30.0%
TTATGTTGTTAATTCTCCCT+GGG + chr8_2:68193875-68193894 None:intergenic 30.0%
TTTATGTTGTTAATTCTCCC+TGG + chr8_2:68193876-68193895 None:intergenic 30.0%
AACAACAACTAAGTGACATT+GGG + chr8_2:68193906-68193925 None:intergenic 30.0%
TAACAACAACTAAGTGACAT+TGG + chr8_2:68193907-68193926 None:intergenic 30.0%
AGATTTGATAAGCAAGCTTA+TGG + chr8_2:68193938-68193957 None:intergenic 30.0%
!!! ATTTTTGAGGTCCATATTAG+GGG - chr8_2:68194118-68194137 Msa1264660:intron 30.0%
CTACACTAAACAAATGGAAT+CGG + chr8_2:68194253-68194272 None:intergenic 30.0%
GTTTCTCTACACTAAACAAA+TGG + chr8_2:68194259-68194278 None:intergenic 30.0%
TTGCTCTTCCTAGAAAAAAT+CGG - chr8_2:68194297-68194316 Msa1264660:intron 30.0%
!! ATTTTGACCCGATTTTTTCT+AGG + chr8_2:68194308-68194327 None:intergenic 30.0%
!! CAGCTATTTTACTTCAAATC+AGG + chr8_2:68194445-68194464 None:intergenic 30.0%
! ATTTGAAGTAAAATAGCTGC+TGG - chr8_2:68194446-68194465 Msa1264660:intron 30.0%
CACATGATTATTTGCGTATT+TGG - chr8_2:68194581-68194600 Msa1264660:intron 30.0%
!!! GTTTGTTTGCTTTTGAGTTA+GGG + chr8_2:68194653-68194672 None:intergenic 30.0%
!!! AGTTTGTTTGCTTTTGAGTT+AGG + chr8_2:68194654-68194673 None:intergenic 30.0%
! AATTGATAATCACAATACGC+AGG + chr8_2:68194943-68194962 None:intergenic 30.0%
! CACAATCTTTTAGATTGTGA+GGG + chr8_2:68195216-68195235 None:intergenic 30.0%
! TCACAATCTTTTAGATTGTG+AGG + chr8_2:68195217-68195236 None:intergenic 30.0%
! AAAGATTGTGATTTGCATCA+AGG - chr8_2:68195226-68195245 Msa1264660:intron 30.0%
AGTTCTTATATTACCTGAAC+TGG + chr8_2:68195389-68195408 None:intergenic 30.0%
GTTCAGGTAATATAAGAACT+TGG - chr8_2:68195389-68195408 Msa1264660:intron 30.0%
AACATTTCTTCTTTGCTTGT+TGG - chr8_2:68195497-68195516 Msa1264660:intron 30.0%
AACTTATCAATGGAAAGATG+AGG - chr8_2:68195532-68195551 Msa1264660:intron 30.0%
TTAAACATGATGATCCTAAG+AGG + chr8_2:68195612-68195631 None:intergenic 30.0%
!!! ATGTTGACTTTTGCATCATT+AGG + chr8_2:68196362-68196381 None:intergenic 30.0%
!! ACATTCTGAAATTCCCAAAT+CGG + chr8_2:68196541-68196560 None:intergenic 30.0%
!! ACCTAGAAATGTTTTTACAC+GGG + chr8_2:68196653-68196672 None:intergenic 30.0%
!! CACCTAGAAATGTTTTTACA+CGG + chr8_2:68196654-68196673 None:intergenic 30.0%
GGTAAACATAGTTTACTTGA+AGG + chr8_2:68196732-68196751 None:intergenic 30.0%
TGTTTACCTTGTTAAACATC+CGG - chr8_2:68196744-68196763 Msa1264660:exon 30.0%
! ATACTCGTATTGCTTTGTTA+AGG - chr8_2:68196781-68196800 Msa1264660:five_prime_UTR 30.0%
AACAGAATGCAAAACCCTAA+CGG + chr8_2:68191862-68191881 None:intergenic 35.0%
!!! CCGTTGACTCTAAATTTTGA+TGG - chr8_2:68191900-68191919 Msa1264660:three_prime_UTR 35.0%
GTATCAAATCTAACAGCGAA+GGG + chr8_2:68192420-68192439 None:intergenic 35.0%
TGTATCAAATCTAACAGCGA+AGG + chr8_2:68192421-68192440 None:intergenic 35.0%
GACACTTTGTCAAGAGAATT+CGG - chr8_2:68192444-68192463 Msa1264660:CDS 35.0%
! TGCATGTGGTTTTTCGTTTT+GGG - chr8_2:68192604-68192623 Msa1264660:CDS 35.0%
GAAATATGAAGGTGACTTAG+TGG - chr8_2:68192688-68192707 Msa1264660:intron 35.0%
AACACACATGTAATTACGTG+TGG - chr8_2:68192870-68192889 Msa1264660:intron 35.0%
TTAGTCTCCCTAAAGAAAAG+AGG + chr8_2:68192956-68192975 None:intergenic 35.0%
! CAATCAACGACAGATTTTAC+CGG - chr8_2:68193004-68193023 Msa1264660:intron 35.0%
AAGAATATACCTATGTGTGC+TGG + chr8_2:68193038-68193057 None:intergenic 35.0%
AGCAAACATCCACATATCAA+AGG + chr8_2:68193072-68193091 None:intergenic 35.0%
! TGGTTTGTCATAAACTGTGT+AGG - chr8_2:68193143-68193162 Msa1264660:intron 35.0%
TTTATTGGGAGTCCCTAATA+TGG - chr8_2:68193371-68193390 Msa1264660:CDS 35.0%
!!! TGGGTGGACCTTTATTTTTA+GGG + chr8_2:68193398-68193417 None:intergenic 35.0%
!!! ATGGGTGGACCTTTATTTTT+AGG + chr8_2:68193399-68193418 None:intergenic 35.0%
TAAAAATAAAGGTCCACCCA+TGG - chr8_2:68193398-68193417 Msa1264660:CDS 35.0%
TTAAGGTAACCTGTTGTAGT+AGG + chr8_2:68193438-68193457 None:intergenic 35.0%
! CAGTTTGGTAGTTTCATAGA+AGG - chr8_2:68193496-68193515 Msa1264660:CDS 35.0%
GAATTGAAAGAGAGTTGGAA+AGG - chr8_2:68193535-68193554 Msa1264660:CDS 35.0%
GAGAGTTGGAAAGGAATATT+TGG - chr8_2:68193544-68193563 Msa1264660:CDS 35.0%
GTTGGAAAGGAATATTTGGT+TGG - chr8_2:68193548-68193567 Msa1264660:CDS 35.0%
ACACAAGGCAGGATAATAAA+AGG + chr8_2:68193766-68193785 None:intergenic 35.0%
!!! GGTTTTTGTTTCTGTTATGC+AGG + chr8_2:68193797-68193816 None:intergenic 35.0%
ATGTAAAAAAAGGATTCCCC+AGG - chr8_2:68193855-68193874 Msa1264660:intron 35.0%
TGTAAAAAAAGGATTCCCCA+GGG - chr8_2:68193856-68193875 Msa1264660:intron 35.0%
TATGTTGTTAATTCTCCCTG+GGG + chr8_2:68193874-68193893 None:intergenic 35.0%
CTATAGCAGGTAATATGCAT+GGG - chr8_2:68194078-68194097 Msa1264660:intron 35.0%
CAAAAATAAAGGTCCACCAA+TGG + chr8_2:68194105-68194124 None:intergenic 35.0%
!!! TTGGTGGACCTTTATTTTTG+AGG - chr8_2:68194105-68194124 Msa1264660:intron 35.0%
ATGTCCTATTCCATCTTGTT+TGG - chr8_2:68194204-68194223 Msa1264660:intron 35.0%
TAAACAAGAGCCAAACAAGA+TGG + chr8_2:68194217-68194236 None:intergenic 35.0%
TGCTCTTCCTAGAAAAAATC+GGG - chr8_2:68194298-68194317 Msa1264660:intron 35.0%
GGGAAGAAGCAAAAAAAACA+TGG + chr8_2:68194424-68194443 None:intergenic 35.0%
TAATGATAAAACCAGCAGCA+GGG + chr8_2:68194915-68194934 None:intergenic 35.0%
TTAATGATAAAACCAGCAGC+AGG + chr8_2:68194916-68194935 None:intergenic 35.0%
! CATGTTTTGCAATGTGAACA+AGG - chr8_2:68195067-68195086 Msa1264660:intron 35.0%
! GTTGGCTTAAGAACTTAAGA+CGG + chr8_2:68195135-68195154 None:intergenic 35.0%
AGTGAATCAACCATTATCTC+TGG + chr8_2:68195160-68195179 None:intergenic 35.0%
! CTATCTAAGGTAATAGCAGA+AGG + chr8_2:68195343-68195362 None:intergenic 35.0%
TCTTATATTACCTGAACTGG+AGG + chr8_2:68195386-68195405 None:intergenic 35.0%
TTGTTATAGATCTGCCTCTT+AGG - chr8_2:68195595-68195614 Msa1264660:intron 35.0%
! TAATTCCGAAGCTGATTCAA+AGG - chr8_2:68196025-68196044 Msa1264660:intron 35.0%
! AATTCCGAAGCTGATTCAAA+GGG - chr8_2:68196026-68196045 Msa1264660:intron 35.0%
AAATCGCTCATTGACATAGA+AGG + chr8_2:68196092-68196111 None:intergenic 35.0%
! ATGTCAATGAGCGATTTTCT+TGG - chr8_2:68196095-68196114 Msa1264660:CDS 35.0%
GCATCACATTTCCAAAGAAA+TGG - chr8_2:68196127-68196146 Msa1264660:CDS 35.0%
ATTTCCAAAGAAATGGCTTC+AGG - chr8_2:68196134-68196153 Msa1264660:CDS 35.0%
TTTCCAAAGAAATGGCTTCA+GGG - chr8_2:68196135-68196154 Msa1264660:CDS 35.0%
AATCTTTCAGCAGAAAAGGA+AGG + chr8_2:68196164-68196183 None:intergenic 35.0%
! TTCCTTTTCTGCTGAAAGAT+TGG - chr8_2:68196163-68196182 Msa1264660:CDS 35.0%
! ATTGGAGTACCAAGAAATGA+TGG - chr8_2:68196181-68196200 Msa1264660:CDS 35.0%
TAATGCCATCCATCATTTCT+TGG + chr8_2:68196193-68196212 None:intergenic 35.0%
!! CATTCTGAAATTCCCAAATC+GGG + chr8_2:68196540-68196559 None:intergenic 35.0%
ACTATCAACGAGACTCAAAA+TGG + chr8_2:68196703-68196722 None:intergenic 35.0%
GTTTACCTTGTTAAACATCC+GGG - chr8_2:68196745-68196764 Msa1264660:exon 35.0%
! TCGTATTGCTTTGTTAAGGA+TGG - chr8_2:68196785-68196804 Msa1264660:five_prime_UTR 35.0%
ATGCAAAACCCTAACGGAAA+AGG + chr8_2:68191856-68191875 None:intergenic 40.0%
TAAGAATCCCCGTTCTCAAT+GGG - chr8_2:68191939-68191958 Msa1264660:three_prime_UTR 40.0%
AAGACGATTCCCATTGAGAA+CGG + chr8_2:68191951-68191970 None:intergenic 40.0%
GATCTCAAATTTGGGGGAAA+TGG + chr8_2:68191986-68192005 None:intergenic 40.0%
ATCCTCGATCTCAAATTTGG+GGG + chr8_2:68191992-68192011 None:intergenic 40.0%
GATCCTCGATCTCAAATTTG+GGG + chr8_2:68191993-68192012 None:intergenic 40.0%
GGATCCTCGATCTCAAATTT+GGG + chr8_2:68191994-68192013 None:intergenic 40.0%
GGAGCATGTTGATCTTGAAT+GGG + chr8_2:68192015-68192034 None:intergenic 40.0%
! AGGAGCATGTTGATCTTGAA+TGG + chr8_2:68192016-68192035 None:intergenic 40.0%
TCCTGAGACTTAAACCCAAA+GGG + chr8_2:68192393-68192412 None:intergenic 40.0%
TTCCTGAGACTTAAACCCAA+AGG + chr8_2:68192394-68192413 None:intergenic 40.0%
TGCTTCAGTTGAAAAGCTGA+AGG - chr8_2:68192522-68192541 Msa1264660:CDS 40.0%
! CTGCATGTGGTTTTTCGTTT+TGG - chr8_2:68192603-68192622 Msa1264660:CDS 40.0%
! TTGCCAAACAGAAGCTTGTT+TGG - chr8_2:68192723-68192742 Msa1264660:intron 40.0%
! TGCCAAACAGAAGCTTGTTT+GGG - chr8_2:68192724-68192743 Msa1264660:intron 40.0%
TTCCCAAACAAGCTTCTGTT+TGG + chr8_2:68192729-68192748 None:intergenic 40.0%
CTTGTTTGGGAAGTTCTTGA+GGG - chr8_2:68192737-68192756 Msa1264660:intron 40.0%
!! GGCTTTAAGTTGACTGATGT+CGG + chr8_2:68192795-68192814 None:intergenic 40.0%
AAAGCCAATTGTCCTGATGA+TGG - chr8_2:68192809-68192828 Msa1264660:intron 40.0%
! CAGACAGCCTCTTTTCTTTA+GGG - chr8_2:68192946-68192965 Msa1264660:intron 40.0%
AATGTGTGCTTTCTAGGTTG+AGG + chr8_2:68192980-68192999 None:intergenic 40.0%
! AACCTAGAAAGCACACATTG+TGG - chr8_2:68192981-68193000 Msa1264660:intron 40.0%
TACAGCTGTCCTTTGATATG+TGG - chr8_2:68193060-68193079 Msa1264660:intron 40.0%
! ACTTGTTGAAATCGTTGAGG+AGG - chr8_2:68193254-68193273 Msa1264660:intron 40.0%
GGTAATATGTACAGGTCCAT+GGG + chr8_2:68193417-68193436 None:intergenic 40.0%
AGGTAATATGTACAGGTCCA+TGG + chr8_2:68193418-68193437 None:intergenic 40.0%
! GGTAGTTTCATAGAAGGCAT+TGG - chr8_2:68193502-68193521 Msa1264660:CDS 40.0%
!! GTTTCATAGAAGGCATTGGA+AGG - chr8_2:68193506-68193525 Msa1264660:CDS 40.0%
GGAAGGAATTGAAAGAGAGT+TGG - chr8_2:68193530-68193549 Msa1264660:CDS 40.0%
TTCTCTGGATGTTGAGAACT+TGG - chr8_2:68193667-68193686 Msa1264660:intron 40.0%
ATGCAGGAAGAGATTACACA+AGG + chr8_2:68193781-68193800 None:intergenic 40.0%
TGCATATTACCTGCTATAGC+AGG + chr8_2:68194077-68194096 None:intergenic 40.0%
GCTATAGCAGGTAATATGCA+TGG - chr8_2:68194077-68194096 Msa1264660:intron 40.0%
AAATAAGGGAGCCCCTAATA+TGG + chr8_2:68194132-68194151 None:intergenic 40.0%
! TAGGGGCTCCCTTATTTATT+TGG - chr8_2:68194135-68194154 Msa1264660:intron 40.0%
AGAGCCAAACAAGATGGAAT+AGG + chr8_2:68194211-68194230 None:intergenic 40.0%
ATGTCCTGTTCCATCTTGTT+TGG - chr8_2:68195009-68195028 Msa1264660:intron 40.0%
! TGTCCTGTTCCATCTTGTTT+GGG - chr8_2:68195010-68195029 Msa1264660:intron 40.0%
! TTGTGATTTGCATCAAGGCA+AGG - chr8_2:68195231-68195250 Msa1264660:intron 40.0%
! TGTGATTTGCATCAAGGCAA+GGG - chr8_2:68195232-68195251 Msa1264660:intron 40.0%
ATATTACCTGAACTGGAGGA+AGG + chr8_2:68195382-68195401 None:intergenic 40.0%
TGATCCCTTTGAATCAGCTT+CGG + chr8_2:68196033-68196052 None:intergenic 40.0%
ATTCAAAGGGATCAAGACAC+TGG - chr8_2:68196039-68196058 Msa1264660:intron 40.0%
TTCAAAGGGATCAAGACACT+GGG - chr8_2:68196040-68196059 Msa1264660:intron 40.0%
TGGGATCAAATAAAACTGCC+TGG - chr8_2:68196059-68196078 Msa1264660:intron 40.0%
GGGATCAAATAAAACTGCCT+GGG - chr8_2:68196060-68196079 Msa1264660:intron 40.0%
TGGAAATGTGATGCTCAATG+TGG + chr8_2:68196121-68196140 None:intergenic 40.0%
TTCCAAAGAAATGGCTTCAG+GGG - chr8_2:68196136-68196155 Msa1264660:CDS 40.0%
CTCCAATCTTTCAGCAGAAA+AGG + chr8_2:68196168-68196187 None:intergenic 40.0%
! GAGTACCAAGAAATGATGGA+TGG - chr8_2:68196185-68196204 Msa1264660:CDS 40.0%
ACATCTGCTTAACGACAATC+AGG - chr8_2:68196217-68196236 Msa1264660:CDS 40.0%
TCTACGCTGTCTCTTACAAA+TGG - chr8_2:68196286-68196305 Msa1264660:CDS 40.0%
AGATATCAAGGCTACTGAAG+AGG - chr8_2:68196382-68196401 Msa1264660:intron 40.0%
AGATGTTTATGGTGGCAATC+CGG - chr8_2:68196412-68196431 Msa1264660:intron 40.0%
ATGTCGAGGAAAGACTCATT+TGG - chr8_2:68196443-68196462 Msa1264660:intron 40.0%
TTTGGAAGAGATGCAATTCG+AGG + chr8_2:68196488-68196507 None:intergenic 40.0%
! TCAGAAGATTAGTCCCGATT+TGG - chr8_2:68196524-68196543 Msa1264660:intron 40.0%
! CAGAAGATTAGTCCCGATTT+GGG - chr8_2:68196525-68196544 Msa1264660:intron 40.0%
GCCCGTGTAAAAACATTTCT+AGG - chr8_2:68196649-68196668 Msa1264660:CDS 40.0%
ACATACCCGGATGTTTAACA+AGG + chr8_2:68196753-68196772 None:intergenic 40.0%
TTGTTAAACATCCGGGTATG+TGG - chr8_2:68196752-68196771 Msa1264660:exon 40.0%
! AGTATCGAAATCCACATACC+CGG + chr8_2:68196766-68196785 None:intergenic 40.0%
GAAAAGGACGTGAAGGAGAA+GGG + chr8_2:68191840-68191859 None:intergenic 45.0%
! CTTCACGTCCTTTTCCGTTA+GGG - chr8_2:68191845-68191864 Msa1264660:three_prime_UTR 45.0%
GTCAACGGAGAAGAAATCGA+AGG + chr8_2:68191888-68191907 None:intergenic 45.0%
CTAAGAATCCCCGTTCTCAA+TGG - chr8_2:68191938-68191957 Msa1264660:three_prime_UTR 45.0%
AGACGATTCCCATTGAGAAC+GGG + chr8_2:68191950-68191969 None:intergenic 45.0%
CTCAAATTTGGGGGAAATGG+AGG + chr8_2:68191983-68192002 None:intergenic 45.0%
! TTCCCCCAAATTTGAGATCG+AGG - chr8_2:68191987-68192006 Msa1264660:three_prime_UTR 45.0%
GGGATCCTCGATCTCAAATT+TGG + chr8_2:68191995-68192014 None:intergenic 45.0%
! ACTTTGTGACGCTTGTTGAG+AGG + chr8_2:68192036-68192055 None:intergenic 45.0%
ACTTAATGAGCCTAGCCCTT+TGG - chr8_2:68192375-68192394 Msa1264660:CDS 45.0%
CTTAATGAGCCTAGCCCTTT+GGG - chr8_2:68192376-68192395 Msa1264660:CDS 45.0%
AGACTTAAACCCAAAGGGCT+AGG + chr8_2:68192388-68192407 None:intergenic 45.0%
TACATTCGAGACTCTGCATG+TGG - chr8_2:68192590-68192609 Msa1264660:CDS 45.0%
GCTTGTTTGGGAAGTTCTTG+AGG - chr8_2:68192736-68192755 Msa1264660:intron 45.0%
AGGTCCATCATCAGGACAAT+TGG + chr8_2:68192816-68192835 None:intergenic 45.0%
AATGTGCTAGGTCCATCATC+AGG + chr8_2:68192824-68192843 None:intergenic 45.0%
ACCTAGCACATTGACCTTAG+TGG - chr8_2:68192832-68192851 Msa1264660:intron 45.0%
ACCACTAAGGTCAATGTGCT+AGG + chr8_2:68192836-68192855 None:intergenic 45.0%
CCTAAAGAAAAGAGGCTGTC+TGG + chr8_2:68192948-68192967 None:intergenic 45.0%
! CCAGACAGCCTCTTTTCTTT+AGG - chr8_2:68192945-68192964 Msa1264660:intron 45.0%
TGCCACAATGTGTGCTTTCT+AGG + chr8_2:68192986-68193005 None:intergenic 45.0%
! TCAACGACAGATTTTACCGG+TGG - chr8_2:68193007-68193026 Msa1264660:intron 45.0%
TTGAAATCGTTGAGGAGGAG+TGG - chr8_2:68193259-68193278 Msa1264660:intron 45.0%
AATATGTACAGGTCCATGGG+TGG + chr8_2:68193414-68193433 None:intergenic 45.0%
AGGTTAGAGCAAGGAATGAG+AGG - chr8_2:68193471-68193490 Msa1264660:CDS 45.0%
GGTTAGAGCAAGGAATGAGA+GGG - chr8_2:68193472-68193491 Msa1264660:CDS 45.0%
AAGGAATGAGAGGGACAGTT+TGG - chr8_2:68193481-68193500 Msa1264660:CDS 45.0%
!! TCATAGAAGGCATTGGAAGG+TGG - chr8_2:68193509-68193528 Msa1264660:CDS 45.0%
AGGAAGAGATTACACAAGGC+AGG + chr8_2:68193777-68193796 None:intergenic 45.0%
ATGTCATGCTAGCTAGTGCT+TGG - chr8_2:68193980-68193999 Msa1264660:intron 45.0%
TTGGAGAAGAGTGAAGTGGT+TGG - chr8_2:68193999-68194018 Msa1264660:intron 45.0%
TGGAGAAGAGTGAAGTGGTT+GGG - chr8_2:68194000-68194019 Msa1264660:intron 45.0%
TTAGGGTAACCTGCTATAGC+AGG - chr8_2:68194065-68194084 Msa1264660:intron 45.0%
GGTAATATGCATGGGTCCAT+TGG - chr8_2:68194086-68194105 Msa1264660:intron 45.0%
AATATGCATGGGTCCATTGG+TGG - chr8_2:68194089-68194108 Msa1264660:intron 45.0%
GTTCCCAAACAAGATGGAAC+AGG + chr8_2:68195016-68195035 None:intergenic 45.0%
GATGGAGTTCCCAAACAAGA+TGG + chr8_2:68195022-68195041 None:intergenic 45.0%
ACTTAAGACGGTCGTTACAC+TGG + chr8_2:68195123-68195142 None:intergenic 45.0%
AAGCCAACAGCCAGAGATAA+TGG - chr8_2:68195147-68195166 Msa1264660:intron 45.0%
CAACCATTATCTCTGGCTGT+TGG + chr8_2:68195153-68195172 None:intergenic 45.0%
! TGCCTCTCGTTTTCAGAACA+TGG - chr8_2:68195267-68195286 Msa1264660:intron 45.0%
! GCCTCTCGTTTTCAGAACAT+GGG - chr8_2:68195268-68195287 Msa1264660:intron 45.0%
!! TCCCATGTTCTGAAAACGAG+AGG + chr8_2:68195272-68195291 None:intergenic 45.0%
! GGTCGTAAATGATGGAGACA+GGG + chr8_2:68195308-68195327 None:intergenic 45.0%
TTGTCTGTGCAGCATCTACA+TGG - chr8_2:68195890-68195909 Msa1264660:CDS 45.0%
TACATCGCTTCTGTTGCATG+TGG + chr8_2:68196005-68196024 None:intergenic 45.0%
CGCTCATTGACATAGAAGGA+CGG + chr8_2:68196088-68196107 None:intergenic 45.0%
ATCCCCTGAAGCCATTTCTT+TGG + chr8_2:68196141-68196160 None:intergenic 45.0%
GAGGACTCGAGAGATGTTTA+TGG - chr8_2:68196401-68196420 Msa1264660:intron 45.0%
GACTCGAGAGATGTTTATGG+TGG - chr8_2:68196404-68196423 Msa1264660:intron 45.0%
!! TCATAGGAGGCACTAGCATT+TGG - chr8_2:68196597-68196616 Msa1264660:intron 45.0%
!!! TTTTTATTTATAGTTTAATA+GGG - chr8_2:68194809-68194828 Msa1264660:intron 5.0%
GGAAAAGGACGTGAAGGAGA+AGG + chr8_2:68191841-68191860 None:intergenic 50.0%
CCTAACGGAAAAGGACGTGA+AGG + chr8_2:68191847-68191866 None:intergenic 50.0%
! CCTTCACGTCCTTTTCCGTT+AGG - chr8_2:68191844-68191863 Msa1264660:three_prime_UTR 50.0%
GACGATTCCCATTGAGAACG+GGG + chr8_2:68191949-68191968 None:intergenic 50.0%
! GCCCTTTGGGTTTAAGTCTC+AGG - chr8_2:68192389-68192408 Msa1264660:CDS 50.0%
! GACAGATTTTACCGGTGGAC+AGG - chr8_2:68193012-68193031 Msa1264660:intron 50.0%
!! AGAAGGCATTGGAAGGTGGA+AGG - chr8_2:68193513-68193532 Msa1264660:CDS 50.0%
GTGCTTGGAGAAGAGTGAAG+TGG - chr8_2:68193995-68194014 Msa1264660:intron 50.0%
GATACATTCTTCCCTGCTGC+TGG - chr8_2:68194901-68194920 Msa1264660:intron 50.0%
TTCTCAATAGCAGCGGATCG+TGG + chr8_2:68195193-68195212 None:intergenic 50.0%
GTGAGGGTTCTCAATAGCAG+CGG + chr8_2:68195200-68195219 None:intergenic 50.0%
TTGCATCAAGGCAAGGGCAA+TGG - chr8_2:68195238-68195257 Msa1264660:intron 50.0%
GATGGAGACAGGGATGAATG+AGG + chr8_2:68195298-68195317 None:intergenic 50.0%
! CGGTCGTAAATGATGGAGAC+AGG + chr8_2:68195309-68195328 None:intergenic 50.0%
CTGTGCTCGGTCGTAAATGA+TGG + chr8_2:68195316-68195335 None:intergenic 50.0%
AGCAGAAGGATCACTGTGCT+CGG + chr8_2:68195329-68195348 None:intergenic 50.0%
TTCGCAGGGCACACTATCTA+AGG + chr8_2:68195356-68195375 None:intergenic 50.0%
TGCACAGACAACTTCTACCG+AGG + chr8_2:68195881-68195900 None:intergenic 50.0%
GCCCGTGTTGTCATGTGAAT+TGG + chr8_2:68196327-68196346 None:intergenic 50.0%
GACAACACGGGCTCTATTGA+AGG - chr8_2:68196335-68196354 Msa1264660:intron 50.0%
ATCGTTGAGGAGGAGTGGTC+AGG - chr8_2:68193264-68193283 Msa1264660:intron 55.0%
! GAAGCACCTTCCTCCAGTTC+AGG - chr8_2:68195373-68195392 Msa1264660:intron 55.0%
GAGTCTTTCCTCGACATGCC+TGG + chr8_2:68196440-68196459 None:intergenic 55.0%
! ATGTGTGCTGGCCTGTCCAC+CGG + chr8_2:68193026-68193045 None:intergenic 60.0%
GTGGACAGGCCAGCACACAT+AGG - chr8_2:68193026-68193045 Msa1264660:intron 60.0%
!! CTGGAGGAAGGTGCTTCGCA+GGG + chr8_2:68195370-68195389 None:intergenic 60.0%
!! ACTGGAGGAAGGTGCTTCGC+AGG + chr8_2:68195371-68195390 None:intergenic 60.0%
GACATAGAAGGACGGAGCCC+AGG + chr8_2:68196080-68196099 None:intergenic 60.0%
TATGGTGGCAATCCGGCACC+AGG - chr8_2:68196419-68196438 Msa1264660:intron 60.0%
TTCCTCGACATGCCTGGTGC+CGG + chr8_2:68196434-68196453 None:intergenic 60.0%
ATCCGGCACCAGGCATGTCG+AGG - chr8_2:68196429-68196448 Msa1264660:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 68191824 68196850 68191824 ID=Msa1264660;Name=Msa1264660
chr8_2 mRNA 68191824 68196850 68191824 ID=Msa1264660-mRNA-1;Parent=Msa1264660;Name=Msa1264660-mRNA-1;_AED=0.11;_eAED=0.11;_QI=95|1|1|1|1|1|6|315|498
chr8_2 exon 68191824 68192659 68191824 ID=Msa1264660-mRNA-1:exon:22576;Parent=Msa1264660-mRNA-1
chr8_2 exon 68193280 68193611 68193280 ID=Msa1264660-mRNA-1:exon:22575;Parent=Msa1264660-mRNA-1
chr8_2 exon 68195627 68195733 68195627 ID=Msa1264660-mRNA-1:exon:22574;Parent=Msa1264660-mRNA-1
chr8_2 exon 68195821 68195994 68195821 ID=Msa1264660-mRNA-1:exon:22573;Parent=Msa1264660-mRNA-1
chr8_2 exon 68196086 68196313 68196086 ID=Msa1264660-mRNA-1:exon:22572;Parent=Msa1264660-mRNA-1
chr8_2 exon 68196621 68196850 68196621 ID=Msa1264660-mRNA-1:exon:22571;Parent=Msa1264660-mRNA-1
chr8_2 five_prime_UTR 68196756 68196850 68196756 ID=Msa1264660-mRNA-1:five_prime_utr;Parent=Msa1264660-mRNA-1
chr8_2 CDS 68196621 68196755 68196621 ID=Msa1264660-mRNA-1:cds;Parent=Msa1264660-mRNA-1
chr8_2 CDS 68196086 68196313 68196086 ID=Msa1264660-mRNA-1:cds;Parent=Msa1264660-mRNA-1
chr8_2 CDS 68195821 68195994 68195821 ID=Msa1264660-mRNA-1:cds;Parent=Msa1264660-mRNA-1
chr8_2 CDS 68195627 68195733 68195627 ID=Msa1264660-mRNA-1:cds;Parent=Msa1264660-mRNA-1
chr8_2 CDS 68193280 68193611 68193280 ID=Msa1264660-mRNA-1:cds;Parent=Msa1264660-mRNA-1
chr8_2 CDS 68192139 68192659 68192139 ID=Msa1264660-mRNA-1:cds;Parent=Msa1264660-mRNA-1
chr8_2 three_prime_UTR 68191824 68192138 68191824 ID=Msa1264660-mRNA-1:three_prime_utr;Parent=Msa1264660-mRNA-1
Gene Sequence

>Msa1264660

ATGGTTCGGTTTATGGGTTCTAAGAATCCCCGTTCTCAATGGGAATCGTCTTCTGCTTCATCCTCCATTTCCCCCAAATTTGAGATCGAGGATCCCATTCAAGATCAACATGCTCCTCTCAACAAGCGTCACAAAGCTACAAATGATATACTTAATGAGCCTAGCCCTTTGGGTTTAAGTCTCAGGAAGAGCCCTTCGCTGTTAGATTTGATACAAATGACACTTTGTCAAGAGAATTCGGTTAATGCAAATACTGCAAATGATAATTTAAACTCTAAAGCAAACAAGGACGCTCGTGCTTCAGTTGAAAAGCTGAAGGCTTCAAATTTCCCAGCTACACATTTAAAAATTGGTTCATGGGAGTATAAATCGAAATATGAAGGTGACTTAGTGGCAAAGTGTTACTTTGCCAAACAGAAGCTTGTTTGGGAAGTTCTTGAGGGTGAGCTGAAAAGTAAAATAGAAATTCAATGGTCCGACATCAGTCAACTTAAAGCCAATTGTCCTGATGATGGACCTAGCACATTGACCTTAGTGGTTGCCAGACAGCCTCTTTTCTTTAGGGAGACTAATCCTCAACCTAGAAAGCACACATTGTGGCAATCAACGACAGATTTTACCGGTGGACAGGCCAGCACACATAGGCAGCATGTTTTGCAATGTGAACAAGGACTGTTGATCAAGCATTATGAAAAGCTTGTCCAGTGTAACGACCGTCTTAAGTTCTTAAGCCAACAGCCAGAGATAATGGTTGATTCACTTCATTTTGATCCACGATCCGCTGCTATTGAGAACCCTCACAATCTAAAAGATTGTGATTTGCATCAAGGCAAGGGCAATGGATCAGCTGCCTCTCGTTTTCAGAACATGGGATCTCCTCATTCATCCCTGTCTCCATCATTTACGACCGAGCACAGTGATCCTTCTGCTATTACCTTAGATAGTGTGCCCTGCGAAGCACCTTCCTCCAGTTCAGAAGCGATGTATAATTCCGAAGCTGATTCAAAGGGATCAAGACACTGGGATCAAATAAAACTGCCTGGGCTCCGTCCTTCTATGTCAATGAGCGATTTTCTTGGCCACATTGAGCATCACATTTCCAAAGAAATGGCTTCAGGGGATCCTTCCTTTTCTGCTGAAAGATTGGAGTACCAAGAAATGATGGATGGCATTACACAACATCTGCTTAACGACAATCAGGTTGCAACAGACTCCGATGAAAAATCACTTATGTCAAGGGTCAATTCTCTACGCTGTCTCTTACAAATGGATCCCCCAGCAGTGCCCAATTCACATGACAACACGGGCTCTATTGAAGGACCTAATGATGCAAAAGTCAACATAGATATCAAGGCTACTGAAGAGGACTCGAGAGATGTTTATGGTGGCAATCCGGCACCAGGCATGTCGAGGAAAGACTCATTTGGAGATTTGCTTCTTAGTCTTCCTCGAATTGCATCTCTTCCAAAATTCTTGTTTGACATATCAGAAGATTAG

Protein sequence

>Msa1264660

MVRFMGSKNPRSQWESSSASSSISPKFEIEDPIQDQHAPLNKRHKATNDILNEPSPLGLSLRKSPSLLDLIQMTLCQENSVNANTANDNLNSKANKDARASVEKLKASNFPATHLKIGSWEYKSKYEGDLVAKCYFAKQKLVWEVLEGELKSKIEIQWSDISQLKANCPDDGPSTLTLVVARQPLFFRETNPQPRKHTLWQSTTDFTGGQASTHRQHVLQCEQGLLIKHYEKLVQCNDRLKFLSQQPEIMVDSLHFDPRSAAIENPHNLKDCDLHQGKGNGSAASRFQNMGSPHSSLSPSFTTEHSDPSAITLDSVPCEAPSSSSEAMYNSEADSKGSRHWDQIKLPGLRPSMSMSDFLGHIEHHISKEMASGDPSFSAERLEYQEMMDGITQHLLNDNQVATDSDEKSLMSRVNSLRCLLQMDPPAVPNSHDNTGSIEGPNDAKVNIDIKATEEDSRDVYGGNPAPGMSRKDSFGDLLLSLPRIASLPKFLFDISED*