Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0941140 | A0A072U6F4 | 82.295 | 305 | 14 | 2 | 1 | 265 | 1 | 305 | 3.46e-175 | 494 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001540 | Msa0941140 | 0.803524 | 3.346270e-49 | -8.615850e-47 |
| Msa0009210 | Msa0941140 | 0.818088 | 2.352148e-52 | -8.615850e-47 |
| Msa0011910 | Msa0941140 | 0.823700 | 1.202872e-53 | -8.615850e-47 |
| Msa0021240 | Msa0941140 | 0.802313 | 5.952526e-49 | -8.615850e-47 |
| Msa0024070 | Msa0941140 | 0.825392 | 4.806854e-54 | -8.615850e-47 |
| Msa0025830 | Msa0941140 | 0.821070 | 4.909561e-53 | -8.615850e-47 |
| Msa0028900 | Msa0941140 | 0.807099 | 5.963589e-50 | -8.615850e-47 |
| Msa0032700 | Msa0941140 | 0.810514 | 1.109927e-50 | -8.615850e-47 |
| Msa0039140 | Msa0941140 | 0.800395 | 1.470507e-48 | -8.615850e-47 |
| Msa0044700 | Msa0941140 | 0.808057 | 3.734206e-50 | -8.615850e-47 |
| Msa0045530 | Msa0941140 | 0.831106 | 2.014022e-55 | -8.615850e-47 |
| Msa0046090 | Msa0941140 | 0.808126 | 3.610313e-50 | -8.615850e-47 |
| Msa0047400 | Msa0941140 | 0.810800 | 9.625086e-51 | -8.615850e-47 |
| Msa0058970 | Msa0941140 | 0.822448 | 2.356524e-53 | -8.615850e-47 |
| Msa0060720 | Msa0941140 | 0.848011 | 8.041810e-60 | -8.615850e-47 |
| Msa0067820 | Msa0941140 | 0.813489 | 2.493931e-51 | -8.615850e-47 |
| Msa0075820 | Msa0941140 | 0.813015 | 3.170098e-51 | -8.615850e-47 |
| Msa0076990 | Msa0941140 | 0.802150 | 6.430678e-49 | -8.615850e-47 |
| Msa0077990 | Msa0941140 | 0.815600 | 8.507516e-52 | -8.615850e-47 |
| Msa0087040 | Msa0941140 | 0.803722 | 3.043232e-49 | -8.615850e-47 |
| Msa0093830 | Msa0941140 | 0.835728 | 1.416742e-56 | -8.615850e-47 |
| Msa0097490 | Msa0941140 | 0.808653 | 2.786938e-50 | -8.615850e-47 |
| Msa0113910 | Msa0941140 | 0.801705 | 7.939261e-49 | -8.615850e-47 |
| Msa0605670 | Msa0941140 | 0.825132 | 5.537188e-54 | -8.615850e-47 |
| Msa0606180 | Msa0941140 | 0.804231 | 2.386003e-49 | -8.615850e-47 |
| Msa0606230 | Msa0941140 | 0.808665 | 2.770412e-50 | -8.615850e-47 |
| Msa0606260 | Msa0941140 | 0.807210 | 5.648828e-50 | -8.615850e-47 |
| Msa0607070 | Msa0941140 | 0.818489 | 1.908547e-52 | -8.615850e-47 |
| Msa0608720 | Msa0941140 | 0.801549 | 8.544688e-49 | -8.615850e-47 |
| Msa0616570 | Msa0941140 | 0.805417 | 1.348740e-49 | -8.615850e-47 |
| Msa0619170 | Msa0941140 | 0.805975 | 1.029492e-49 | -8.615850e-47 |
| Msa0619870 | Msa0941140 | 0.832907 | 7.229376e-56 | -8.615850e-47 |
| Msa0623350 | Msa0941140 | 0.818862 | 1.570256e-52 | -8.615850e-47 |
| Msa0623470 | Msa0941140 | 0.823602 | 1.267827e-53 | -8.615850e-47 |
| Msa0625820 | Msa0941140 | 0.829679 | 4.498947e-55 | -8.615850e-47 |
| Msa0646310 | Msa0941140 | 0.817892 | 2.605337e-52 | -8.615850e-47 |
| Msa0646710 | Msa0941140 | 0.838891 | 2.195978e-57 | -8.615850e-47 |
| Msa0649140 | Msa0941140 | 0.836193 | 1.080125e-56 | -8.615850e-47 |
| Msa0652360 | Msa0941140 | 0.824114 | 9.620566e-54 | -8.615850e-47 |
| Msa0653090 | Msa0941140 | 0.813468 | 2.521029e-51 | -8.615850e-47 |
| Msa0654560 | Msa0941140 | 0.812372 | 4.383467e-51 | -8.615850e-47 |
| Msa0655980 | Msa0941140 | 0.808458 | 3.067400e-50 | -8.615850e-47 |
| Msa0660160 | Msa0941140 | 0.820218 | 7.702870e-53 | -8.615850e-47 |
| Msa0663540 | Msa0941140 | 0.827511 | 1.502382e-54 | -8.615850e-47 |
| Msa0679880 | Msa0941140 | 0.815163 | 1.064299e-51 | -8.615850e-47 |
| Msa0687650 | Msa0941140 | 0.824895 | 6.298830e-54 | -8.615850e-47 |
| Msa0687740 | Msa0941140 | 0.822253 | 2.615080e-53 | -8.615850e-47 |
| Msa0695470 | Msa0941140 | 0.825769 | 3.912142e-54 | -8.615850e-47 |
| Msa0696600 | Msa0941140 | 0.800360 | 1.494603e-48 | -8.615850e-47 |
| Msa0699900 | Msa0941140 | 0.804544 | 2.052752e-49 | -8.615850e-47 |
| Msa0703620 | Msa0941140 | 0.816255 | 6.076260e-52 | -8.615850e-47 |
| Msa0704790 | Msa0941140 | 0.802667 | 5.033290e-49 | -8.615850e-47 |
| Msa0706490 | Msa0941140 | 0.827056 | 1.930979e-54 | -8.615850e-47 |
| Msa0708120 | Msa0941140 | 0.818594 | 1.806644e-52 | -8.615850e-47 |
| Msa0708450 | Msa0941140 | 0.824375 | 8.351241e-54 | -8.615850e-47 |
| Msa0711510 | Msa0941140 | 0.808486 | 3.025527e-50 | -8.615850e-47 |
| Msa0720380 | Msa0941140 | 0.804967 | 1.675403e-49 | -8.615850e-47 |
| Msa0734430 | Msa0941140 | 0.816585 | 5.125546e-52 | -8.615850e-47 |
| Msa0748470 | Msa0941140 | 0.813873 | 2.053561e-51 | -8.615850e-47 |
| Msa0748890 | Msa0941140 | 0.809506 | 1.829459e-50 | -8.615850e-47 |
| Msa0749940 | Msa0941140 | 0.849586 | 2.939924e-60 | -8.615850e-47 |
| Msa0751540 | Msa0941140 | 0.804383 | 2.217762e-49 | -8.615850e-47 |
| Msa0754880 | Msa0941140 | 0.811877 | 5.618329e-51 | -8.615850e-47 |
| Msa0772530 | Msa0941140 | 0.826041 | 3.371921e-54 | -8.615850e-47 |
| Msa0774090 | Msa0941140 | 0.812628 | 3.852788e-51 | -8.615850e-47 |
| Msa0775970 | Msa0941140 | 0.825383 | 4.830454e-54 | -8.615850e-47 |
| Msa0796840 | Msa0941140 | 0.841568 | 4.392239e-58 | -8.615850e-47 |
| Msa0797180 | Msa0941140 | 0.802207 | 6.260872e-49 | -8.615850e-47 |
| Msa0798500 | Msa0941140 | 0.824900 | 6.283080e-54 | -8.615850e-47 |
| Msa0803220 | Msa0941140 | 0.818296 | 2.110453e-52 | -8.615850e-47 |
| Msa0803930 | Msa0941140 | 0.800598 | 1.337003e-48 | -8.615850e-47 |
| Msa0811710 | Msa0941140 | 0.818775 | 1.643865e-52 | -8.615850e-47 |
| Msa0814760 | Msa0941140 | 0.807351 | 5.274749e-50 | -8.615850e-47 |
| Msa0830410 | Msa0941140 | 0.802058 | 6.718408e-49 | -8.615850e-47 |
| Msa0831710 | Msa0941140 | 0.801585 | 8.399817e-49 | -8.615850e-47 |
| Msa0833980 | Msa0941140 | 0.810664 | 1.029998e-50 | -8.615850e-47 |
| Msa0837040 | Msa0941140 | 0.839117 | 1.919636e-57 | -8.615850e-47 |
| Msa0841570 | Msa0941140 | 0.832305 | 1.019714e-55 | -8.615850e-47 |
| Msa0141770 | Msa0941140 | 0.832826 | 7.572246e-56 | -8.615850e-47 |
| Msa0145590 | Msa0941140 | 0.811639 | 6.332395e-51 | -8.615850e-47 |
| Msa0147070 | Msa0941140 | 0.814856 | 1.245217e-51 | -8.615850e-47 |
| Msa0151780 | Msa0941140 | 0.836779 | 7.660459e-57 | -8.615850e-47 |
| Msa0151790 | Msa0941140 | 0.815383 | 9.506742e-52 | -8.615850e-47 |
| Msa0168950 | Msa0941140 | 0.803824 | 2.898459e-49 | -8.615850e-47 |
| Msa0170550 | Msa0941140 | 0.811567 | 6.564479e-51 | -8.615850e-47 |
| Msa0172820 | Msa0941140 | 0.810478 | 1.129946e-50 | -8.615850e-47 |
| Msa0181380 | Msa0941140 | 0.837272 | 5.731951e-57 | -8.615850e-47 |
| Msa0181690 | Msa0941140 | 0.808832 | 2.551222e-50 | -8.615850e-47 |
| Msa0185770 | Msa0941140 | 0.832472 | 9.270033e-56 | -8.615850e-47 |
| Msa0195850 | Msa0941140 | 0.835323 | 1.793787e-56 | -8.615850e-47 |
| Msa0196620 | Msa0941140 | 0.813942 | 1.982818e-51 | -8.615850e-47 |
| Msa0198280 | Msa0941140 | 0.824123 | 9.569288e-54 | -8.615850e-47 |
| Msa0217300 | Msa0941140 | 0.808505 | 2.997029e-50 | -8.615850e-47 |
| Msa0231180 | Msa0941140 | 0.830103 | 3.544833e-55 | -8.615850e-47 |
| Msa0232160 | Msa0941140 | 0.812997 | 3.198991e-51 | -8.615850e-47 |
| Msa0237690 | Msa0941140 | 0.804600 | 1.998961e-49 | -8.615850e-47 |
| Msa0368430 | Msa0941140 | 0.806414 | 8.323255e-50 | -8.615850e-47 |
| Msa0369770 | Msa0941140 | 0.817963 | 2.511135e-52 | -8.615850e-47 |
| Msa0371010 | Msa0941140 | 0.806795 | 6.916073e-50 | -8.615850e-47 |
| Msa0371050 | Msa0941140 | 0.810389 | 1.180816e-50 | -8.615850e-47 |
| Msa0371640 | Msa0941140 | 0.821765 | 3.392912e-53 | -8.615850e-47 |
| Msa0376760 | Msa0941140 | 0.806800 | 6.898997e-50 | -8.615850e-47 |
| Msa0380390 | Msa0941140 | 0.802579 | 5.247366e-49 | -8.615850e-47 |
| Msa0380470 | Msa0941140 | 0.807801 | 4.232683e-50 | -8.615850e-47 |
| Msa0383110 | Msa0941140 | 0.806525 | 7.884692e-50 | -8.615850e-47 |
| Msa0386230 | Msa0941140 | 0.802613 | 5.161698e-49 | -8.615850e-47 |
| Msa0386310 | Msa0941140 | 0.806104 | 9.674297e-50 | -8.615850e-47 |
| Msa0388000 | Msa0941140 | 0.810125 | 1.346713e-50 | -8.615850e-47 |
| Msa0398990 | Msa0941140 | 0.813513 | 2.464650e-51 | -8.615850e-47 |
| Msa0400890 | Msa0941140 | 0.803548 | 3.307525e-49 | -8.615850e-47 |
| Msa0402630 | Msa0941140 | 0.812266 | 4.622098e-51 | -8.615850e-47 |
| Msa0404840 | Msa0941140 | 0.829431 | 5.168348e-55 | -8.615850e-47 |
| Msa0404900 | Msa0941140 | 0.804773 | 1.839192e-49 | -8.615850e-47 |
| Msa0412470 | Msa0941140 | 0.825986 | 3.474566e-54 | -8.615850e-47 |
| Msa0415060 | Msa0941140 | 0.806429 | 8.262157e-50 | -8.615850e-47 |
| Msa0415860 | Msa0941140 | 0.808635 | 2.811577e-50 | -8.615850e-47 |
| Msa0417140 | Msa0941140 | 0.820108 | 8.164891e-53 | -8.615850e-47 |
| Msa0420100 | Msa0941140 | 0.812259 | 4.639119e-51 | -8.615850e-47 |
| Msa0425150 | Msa0941140 | 0.806024 | 1.005259e-49 | -8.615850e-47 |
| Msa0428740 | Msa0941140 | 0.810998 | 8.721738e-51 | -8.615850e-47 |
| Msa0429490 | Msa0941140 | 0.823968 | 1.040723e-53 | -8.615850e-47 |
| Msa0429560 | Msa0941140 | 0.835322 | 1.795127e-56 | -8.615850e-47 |
| Msa0429990 | Msa0941140 | 0.800738 | 1.252067e-48 | -8.615850e-47 |
| Msa0431310 | Msa0941140 | 0.804591 | 2.006935e-49 | -8.615850e-47 |
| Msa0434830 | Msa0941140 | 0.810721 | 1.001434e-50 | -8.615850e-47 |
| Msa0436310 | Msa0941140 | 0.824908 | 6.255250e-54 | -8.615850e-47 |
| Msa0439130 | Msa0941140 | 0.805704 | 1.174092e-49 | -8.615850e-47 |
| Msa0448880 | Msa0941140 | 0.814830 | 1.261637e-51 | -8.615850e-47 |
| Msa0450830 | Msa0941140 | 0.823890 | 1.085438e-53 | -8.615850e-47 |
| Msa0450920 | Msa0941140 | 0.818248 | 2.164807e-52 | -8.615850e-47 |
| Msa0457750 | Msa0941140 | 0.835633 | 1.497997e-56 | -8.615850e-47 |
| Msa0463980 | Msa0941140 | 0.822704 | 2.054822e-53 | -8.615850e-47 |
| Msa0471700 | Msa0941140 | 0.805257 | 1.456769e-49 | -8.615850e-47 |
| Msa0474290 | Msa0941140 | 0.819533 | 1.104970e-52 | -8.615850e-47 |
| Msa0475130 | Msa0941140 | 0.840331 | 9.271481e-58 | -8.615850e-47 |
| Msa0476820 | Msa0941140 | 0.803664 | 3.129934e-49 | -8.615850e-47 |
| Msa0480040 | Msa0941140 | 0.826198 | 3.094117e-54 | -8.615850e-47 |
| Msa0245690 | Msa0941140 | 0.811148 | 8.092976e-51 | -8.615850e-47 |
| Msa0246470 | Msa0941140 | 0.801031 | 1.090511e-48 | -8.615850e-47 |
| Msa0246510 | Msa0941140 | 0.807444 | 5.041042e-50 | -8.615850e-47 |
| Msa0247340 | Msa0941140 | 0.804777 | 1.835629e-49 | -8.615850e-47 |
| Msa0266100 | Msa0941140 | 0.826876 | 2.132774e-54 | -8.615850e-47 |
| Msa0269610 | Msa0941140 | 0.803580 | 3.257219e-49 | -8.615850e-47 |
| Msa0275260 | Msa0941140 | 0.847043 | 1.484062e-59 | -8.615850e-47 |
| Msa0276030 | Msa0941140 | 0.818359 | 2.042352e-52 | -8.615850e-47 |
| Msa0284980 | Msa0941140 | 0.829204 | 5.867952e-55 | -8.615850e-47 |
| Msa0288300 | Msa0941140 | 0.804627 | 1.972741e-49 | -8.615850e-47 |
| Msa0288350 | Msa0941140 | 0.801122 | 1.044808e-48 | -8.615850e-47 |
| Msa0288360 | Msa0941140 | 0.803087 | 4.120426e-49 | -8.615850e-47 |
| Msa0290040 | Msa0941140 | 0.804203 | 2.418093e-49 | -8.615850e-47 |
| Msa0296100 | Msa0941140 | 0.823161 | 1.607306e-53 | -8.615850e-47 |
| Msa0296490 | Msa0941140 | 0.827492 | 1.518344e-54 | -8.615850e-47 |
| Msa0304070 | Msa0941140 | 0.800293 | 1.542678e-48 | -8.615850e-47 |
| Msa0305810 | Msa0941140 | 0.809537 | 1.801659e-50 | -8.615850e-47 |
| Msa0315760 | Msa0941140 | 0.826665 | 2.394359e-54 | -8.615850e-47 |
| Msa0316330 | Msa0941140 | 0.812448 | 4.217427e-51 | -8.615850e-47 |
| Msa0324630 | Msa0941140 | 0.821516 | 3.874435e-53 | -8.615850e-47 |
| Msa0341710 | Msa0941140 | 0.825788 | 3.871910e-54 | -8.615850e-47 |
| Msa0347600 | Msa0941140 | 0.840321 | 9.328076e-58 | -8.615850e-47 |
| Msa0352120 | Msa0941140 | 0.804849 | 1.773450e-49 | -8.615850e-47 |
| Msa0353890 | Msa0941140 | 0.826674 | 2.382565e-54 | -8.615850e-47 |
| Msa0485350 | Msa0941140 | 0.805483 | 1.306406e-49 | -8.615850e-47 |
| Msa0486200 | Msa0941140 | 0.828834 | 7.213105e-55 | -8.615850e-47 |
| Msa0486240 | Msa0941140 | 0.812544 | 4.020005e-51 | -8.615850e-47 |
| Msa0493550 | Msa0941140 | 0.820677 | 6.046348e-53 | -8.615850e-47 |
| Msa0498070 | Msa0941140 | 0.801201 | 1.006823e-48 | -8.615850e-47 |
| Msa0498090 | Msa0941140 | 0.820962 | 5.198806e-53 | -8.615850e-47 |
| Msa0498250 | Msa0941140 | 0.818616 | 1.786199e-52 | -8.615850e-47 |
| Msa0500580 | Msa0941140 | 0.809379 | 1.948050e-50 | -8.615850e-47 |
| Msa0501920 | Msa0941140 | 0.820308 | 7.347000e-53 | -8.615850e-47 |
| Msa0506740 | Msa0941140 | 0.812854 | 3.437490e-51 | -8.615850e-47 |
| Msa0508620 | Msa0941140 | 0.804220 | 2.398827e-49 | -8.615850e-47 |
| Msa0508660 | Msa0941140 | 0.807473 | 4.969772e-50 | -8.615850e-47 |
| Msa0509530 | Msa0941140 | 0.819000 | 1.461328e-52 | -8.615850e-47 |
| Msa0511930 | Msa0941140 | 0.818725 | 1.687015e-52 | -8.615850e-47 |
| Msa0517820 | Msa0941140 | 0.819219 | 1.302550e-52 | -8.615850e-47 |
| Msa0518720 | Msa0941140 | 0.822249 | 2.619972e-53 | -8.615850e-47 |
| Msa0522820 | Msa0941140 | 0.800835 | 1.195842e-48 | -8.615850e-47 |
| Msa0524570 | Msa0941140 | 0.806621 | 7.524274e-50 | -8.615850e-47 |
| Msa0527420 | Msa0941140 | 0.817526 | 3.150358e-52 | -8.615850e-47 |
| Msa0538140 | Msa0941140 | 0.812586 | 3.935096e-51 | -8.615850e-47 |
| Msa0548230 | Msa0941140 | 0.811752 | 5.984098e-51 | -8.615850e-47 |
| Msa0549700 | Msa0941140 | 0.807078 | 6.024127e-50 | -8.615850e-47 |
| Msa0550280 | Msa0941140 | 0.845925 | 2.996425e-59 | -8.615850e-47 |
| Msa0552920 | Msa0941140 | 0.813684 | 2.259167e-51 | -8.615850e-47 |
| Msa0557770 | Msa0941140 | 0.825443 | 4.674164e-54 | -8.615850e-47 |
| Msa0562040 | Msa0941140 | 0.817714 | 2.858011e-52 | -8.615850e-47 |
| Msa0574450 | Msa0941140 | 0.807537 | 4.816239e-50 | -8.615850e-47 |
| Msa0576110 | Msa0941140 | 0.811510 | 6.754947e-51 | -8.615850e-47 |
| Msa0577910 | Msa0941140 | 0.819969 | 8.782787e-53 | -8.615850e-47 |
| Msa0578400 | Msa0941140 | 0.818513 | 1.884782e-52 | -8.615850e-47 |
| Msa0583810 | Msa0941140 | 0.815681 | 8.160734e-52 | -8.615850e-47 |
| Msa0585810 | Msa0941140 | 0.804941 | 1.696119e-49 | -8.615850e-47 |
| Msa0598980 | Msa0941140 | 0.806028 | 1.003357e-49 | -8.615850e-47 |
| Msa0600940 | Msa0941140 | 0.814820 | 1.268133e-51 | -8.615850e-47 |
| Msa0602670 | Msa0941140 | 0.812079 | 5.077883e-51 | -8.615850e-47 |
| Msa0851870 | Msa0941140 | 0.821036 | 4.998275e-53 | -8.615850e-47 |
| Msa0866650 | Msa0941140 | 0.806112 | 9.636467e-50 | -8.615850e-47 |
| Msa0868520 | Msa0941140 | 0.803438 | 3.486510e-49 | -8.615850e-47 |
| Msa0869090 | Msa0941140 | 0.802524 | 5.386709e-49 | -8.615850e-47 |
| Msa0875990 | Msa0941140 | 0.823607 | 1.264923e-53 | -8.615850e-47 |
| Msa0879820 | Msa0941140 | 0.812200 | 4.779366e-51 | -8.615850e-47 |
| Msa0880200 | Msa0941140 | 0.811980 | 5.335559e-51 | -8.615850e-47 |
| Msa0905190 | Msa0941140 | 0.800485 | 1.409454e-48 | -8.615850e-47 |
| Msa0921200 | Msa0941140 | 0.801612 | 8.294737e-49 | -8.615850e-47 |
| Msa0926090 | Msa0941140 | 0.801938 | 7.108952e-49 | -8.615850e-47 |
| Msa0929440 | Msa0941140 | 0.831793 | 1.364326e-55 | -8.615850e-47 |
| Msa0933320 | Msa0941140 | 0.810501 | 1.117036e-50 | -8.615850e-47 |
| Msa0934800 | Msa0941140 | 0.816590 | 5.112664e-52 | -8.615850e-47 |
| Msa0937180 | Msa0941140 | 0.803591 | 3.240218e-49 | -8.615850e-47 |
| Msa0937190 | Msa0941140 | 0.803456 | 3.455541e-49 | -8.615850e-47 |
| Msa0940400 | Msa0941140 | 0.809027 | 2.317356e-50 | -8.615850e-47 |
| Msa0941140 | Msa0941410 | 0.812832 | 3.475519e-51 | -8.615850e-47 |
| Msa0941140 | Msa0941420 | 0.806099 | 9.696123e-50 | -8.615850e-47 |
| Msa0941140 | Msa0959970 | 0.815499 | 8.961488e-52 | -8.615850e-47 |
| Msa0941140 | Msa0967890 | 0.808767 | 2.634800e-50 | -8.615850e-47 |
| Msa0941140 | Msa0967940 | 0.815911 | 7.253652e-52 | -8.615850e-47 |
| Msa0941140 | Msa0971100 | 0.810244 | 1.269054e-50 | -8.615850e-47 |
| Msa0941140 | Msa0978260 | 0.800514 | 1.390673e-48 | -8.615850e-47 |
| Msa0941140 | Msa0978560 | 0.804691 | 1.913297e-49 | -8.615850e-47 |
| Msa0941140 | Msa0985570 | 0.816125 | 6.496739e-52 | -8.615850e-47 |
| Msa0941140 | Msa1031620 | 0.801768 | 7.702979e-49 | -8.615850e-47 |
| Msa0941140 | Msa1031650 | 0.807400 | 5.149021e-50 | -8.615850e-47 |
| Msa0941140 | Msa1033250 | 0.818897 | 1.542401e-52 | -8.615850e-47 |
| Msa0941140 | Msa1035090 | 0.818724 | 1.688213e-52 | -8.615850e-47 |
| Msa0941140 | Msa1036370 | 0.812809 | 3.516254e-51 | -8.615850e-47 |
| Msa0941140 | Msa1054620 | 0.811974 | 5.353485e-51 | -8.615850e-47 |
| Msa0941140 | Msa1061310 | 0.803565 | 3.281390e-49 | -8.615850e-47 |
| Msa0941140 | Msa1061420 | 0.818510 | 1.887547e-52 | -8.615850e-47 |
| Msa0941140 | Msa1072850 | 0.812317 | 4.505161e-51 | -8.615850e-47 |
| Msa0941140 | Msa1085580 | 0.831924 | 1.267065e-55 | -8.615850e-47 |
| Msa0941140 | Msa1095880 | 0.806264 | 8.950920e-50 | -8.615850e-47 |
| Msa0941140 | Msa1106760 | 0.844966 | 5.446788e-59 | -8.615850e-47 |
| Msa0941140 | Msa1118870 | 0.809460 | 1.871795e-50 | -8.615850e-47 |
| Msa0941140 | Msa1126980 | 0.803506 | 3.375105e-49 | -8.615850e-47 |
| Msa0941140 | Msa1127530 | 0.814815 | 1.271048e-51 | -8.615850e-47 |
| Msa0941140 | Msa1134840 | 0.804041 | 2.613472e-49 | -8.615850e-47 |
| Msa0941140 | Msa1150170 | 0.844174 | 8.898919e-59 | -8.615850e-47 |
| Msa0941140 | Msa1165330 | 0.807537 | 4.815725e-50 | -8.615850e-47 |
| Msa0941140 | Msa1175740 | 0.817784 | 2.754956e-52 | -8.615850e-47 |
| Msa0941140 | Msa1177300 | 0.830748 | 2.466112e-55 | -8.615850e-47 |
| Msa0941140 | Msa1184100 | 0.806892 | 6.595322e-50 | -8.615850e-47 |
| Msa0941140 | Msa1190670 | 0.808062 | 3.724161e-50 | -8.615850e-47 |
| Msa0941140 | Msa1203320 | 0.812141 | 4.923257e-51 | -8.615850e-47 |
| Msa0941140 | Msa1206440 | 0.812382 | 4.360885e-51 | -8.615850e-47 |
| Msa0941140 | Msa1206500 | 0.800145 | 1.653544e-48 | -8.615850e-47 |
| Msa0941140 | Msa1211930 | 0.807059 | 6.080391e-50 | -8.615850e-47 |
| Msa0941140 | Msa1218310 | 0.801476 | 8.843787e-49 | -8.615850e-47 |
| Msa0941140 | Msa1222900 | 0.804775 | 1.836863e-49 | -8.615850e-47 |
| Msa0941140 | Msa1223050 | 0.813982 | 1.943095e-51 | -8.615850e-47 |
| Msa0941140 | Msa1223520 | 0.823242 | 1.539530e-53 | -8.615850e-47 |
| Msa0941140 | Msa1224150 | 0.802983 | 4.329790e-49 | -8.615850e-47 |
| Msa0941140 | Msa1225280 | 0.828000 | 1.146570e-54 | -8.615850e-47 |
| Msa0941140 | Msa1228260 | 0.800373 | 1.485634e-48 | -8.615850e-47 |
| Msa0941140 | Msa1235880 | 0.828985 | 6.627882e-55 | -8.615850e-47 |
| Msa0941140 | Msa1236090 | 0.808920 | 2.443675e-50 | -8.615850e-47 |
| Msa0941140 | Msa1244940 | 0.816126 | 6.494601e-52 | -8.615850e-47 |
| Msa0941140 | Msa1251830 | 0.806502 | 7.975283e-50 | -8.615850e-47 |
| Msa0941140 | Msa1263460 | 0.817585 | 3.055274e-52 | -8.615850e-47 |
| Msa0941140 | Msa1263600 | 0.827296 | 1.692243e-54 | -8.615850e-47 |
| Msa0941140 | Msa1264670 | 0.810773 | 9.755225e-51 | -8.615850e-47 |
| Msa0941140 | Msa1267560 | 0.829060 | 6.359219e-55 | -8.615850e-47 |
| Msa0941140 | Msa1269550 | 0.846085 | 2.709679e-59 | -8.615850e-47 |
| Msa0941140 | Msa1297500 | 0.809776 | 1.601013e-50 | -8.615850e-47 |
| Msa0941140 | Msa1297560 | 0.818451 | 1.947249e-52 | -8.615850e-47 |
| Msa0941140 | Msa1298180 | 0.816838 | 4.498747e-52 | -8.615850e-47 |
| Msa0941140 | Msa1302750 | 0.829400 | 5.258520e-55 | -8.615850e-47 |
| Msa0941140 | Msa1315990 | 0.841347 | 5.019912e-58 | -8.615850e-47 |
| Msa0941140 | Msa1325260 | 0.805612 | 1.227518e-49 | -8.615850e-47 |
| Msa0941140 | Msa1334690 | 0.818721 | 1.690600e-52 | -8.615850e-47 |
| Msa0941140 | Msa1337950 | 0.813791 | 2.139854e-51 | -8.615850e-47 |
| Msa0941140 | Msa1346890 | 0.823189 | 1.583756e-53 | -8.615850e-47 |
| Msa0941140 | Msa1349720 | 0.834512 | 2.871126e-56 | -8.615850e-47 |
| Msa0941140 | Msa1364650 | 0.800230 | 1.588774e-48 | -8.615850e-47 |
| Msa0941140 | Msa1371690 | 0.828040 | 1.121123e-54 | -8.615850e-47 |
| Msa0941140 | Msa1372460 | 0.802448 | 5.583866e-49 | -8.615850e-47 |
| Msa0941140 | Msa1376230 | 0.811682 | 6.197513e-51 | -8.615850e-47 |
| Msa0941140 | Msa1376560 | 0.817866 | 2.640088e-52 | -8.615850e-47 |
| Msa0941140 | Msa1386820 | 0.816045 | 6.771560e-52 | -8.615850e-47 |
| Msa0941140 | Msa1387650 | 0.821005 | 5.080597e-53 | -8.615850e-47 |
| Msa0941140 | Msa1388010 | 0.808228 | 3.434244e-50 | -8.615850e-47 |
| Msa0941140 | Msa1405990 | 0.825602 | 4.285381e-54 | -8.615850e-47 |
| Msa0941140 | Msa1412810 | 0.807782 | 4.272058e-50 | -8.615850e-47 |
| Msa0941140 | Msa1420590 | 0.812071 | 5.097642e-51 | -8.615850e-47 |
| Msa0941140 | Msa1425530 | 0.813871 | 2.055167e-51 | -8.615850e-47 |
| Msa0941140 | Msa1428050 | 0.816562 | 5.187697e-52 | -8.615850e-47 |
| Msa0941140 | Msa1429390 | 0.829273 | 5.645738e-55 | -8.615850e-47 |
| Msa0941140 | Msa1437690 | 0.818401 | 1.998786e-52 | -8.615850e-47 |
| Msa0941140 | Msa1444750 | 0.818559 | 1.840588e-52 | -8.615850e-47 |
| Msa0941140 | Msa1452800 | 0.801735 | 7.827148e-49 | -8.615850e-47 |
| Msa0941140 | Msa1453900 | 0.816694 | 4.844823e-52 | -8.615850e-47 |
| Msa0941140 | Msa1455560 | 0.824276 | 8.809856e-54 | -8.615850e-47 |
| Msa0941140 | Msa1460340 | 0.803384 | 3.577252e-49 | -8.615850e-47 |
| Msa0941140 | Msa1462700 | 0.802241 | 6.158873e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0941140 | MtrunA17_Chr6g0457141 | 82.295 | 305 | 14 | 2 | 1 | 265 | 1 | 305 | 6.66e-179 | 494 |
| Msa0941140 | MtrunA17_Chr7g0220871 | 50.836 | 299 | 94 | 9 | 11 | 261 | 9 | 302 | 2.14e-77 | 236 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0941140 | AT5G16030.4 | 41.909 | 241 | 79 | 8 | 14 | 198 | 2 | 237 | 2.20e-40 | 140 |
| Msa0941140 | AT5G16030.1 | 41.909 | 241 | 79 | 8 | 14 | 198 | 2 | 237 | 2.30e-39 | 140 |
| Msa0941140 | AT5G16030.2 | 41.736 | 242 | 79 | 8 | 14 | 198 | 2 | 238 | 3.74e-39 | 139 |
| Msa0941140 | AT5G16030.3 | 41.365 | 249 | 77 | 8 | 14 | 198 | 2 | 245 | 3.21e-38 | 137 |
| Msa0941140 | AT3G02500.2 | 52.593 | 135 | 42 | 3 | 15 | 132 | 3 | 132 | 2.04e-37 | 133 |
| Msa0941140 | AT3G02500.3 | 48.000 | 150 | 41 | 3 | 15 | 132 | 3 | 147 | 1.06e-35 | 129 |
| Msa0941140 | AT3G02500.1 | 48.000 | 150 | 41 | 3 | 15 | 132 | 3 | 147 | 1.24e-35 | 129 |
| Msa0941140 | AT5G16030.5 | 43.448 | 145 | 58 | 3 | 74 | 198 | 7 | 147 | 3.01e-24 | 98.2 |
Find 40 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCCTGGATATACATTAAA+AGG | 0.177460 | 6_3:+14560857 | Msa0941140:CDS |
| TATATATGCAACCCTCTTTC+AGG | 0.191682 | 6_3:+14561883 | Msa0941140:CDS |
| TCTTGTTTCATTGAACTATA+AGG | 0.296631 | 6_3:-14560677 | None:intergenic |
| ATATGCTATTATTCCTTGTT+TGG | 0.314840 | 6_3:-14564072 | None:intergenic |
| TCTAGCACTGCTTCTTCTCC+TGG | 0.359111 | 6_3:+14560842 | Msa0941140:CDS |
| AGAGTTCAATTTAACAGAAT+GGG | 0.365032 | 6_3:+14560706 | Msa0941140:CDS |
| CAGAGTTCAATTTAACAGAA+TGG | 0.417830 | 6_3:+14560705 | Msa0941140:CDS |
| GATGGAGTTAAATTAGTGCT+TGG | 0.456349 | 6_3:-14562630 | None:intergenic |
| GCTCTTCAATTTCATAGTCC+AGG | 0.458142 | 6_3:+14562069 | Msa0941140:CDS |
| AGAAGAAGCAGTGCTAGAAA+TGG | 0.469708 | 6_3:-14560837 | None:intergenic |
| GATTTGCATTAAATTCCAAA+TGG | 0.480750 | 6_3:+14561845 | Msa0941140:CDS |
| ATATATGCAACCCTCTTTCA+GGG | 0.494830 | 6_3:+14561884 | Msa0941140:CDS |
| TCAAACTAAATCTGAGGAAG+AGG | 0.510446 | 6_3:+14562701 | Msa0941140:CDS |
| ATTGGCACCTCCCCTGAAAG+AGG | 0.516149 | 6_3:-14561895 | None:intergenic |
| TTTGCAGATAAACATTCCAT+TGG | 0.516570 | 6_3:-14561913 | None:intergenic |
| TTCATTGAACTATAAGGAGA+TGG | 0.521597 | 6_3:-14560671 | None:intergenic |
| TCTTTCAGGGGAGGTGCCAA+TGG | 0.529572 | 6_3:+14561897 | Msa0941140:CDS |
| AAAACACATGGCTTCCACAT+TGG | 0.533224 | 6_3:+14560640 | Msa0941140:exon |
| GATGAACAACTTTGCAGACA+AGG | 0.536730 | 6_3:+14564001 | Msa0941140:CDS |
| ATTTGTTGACATCTCTACAA+TGG | 0.537047 | 6_3:-14562652 | None:intergenic |
| ATCAAAACAAATTCAAACAA+AGG | 0.552023 | 6_3:+14562008 | Msa0941140:CDS |
| GAGTTCAATTTAACAGAATG+GGG | 0.572131 | 6_3:+14560707 | Msa0941140:CDS |
| GTTGACATCTCTACAATGGA+TGG | 0.575450 | 6_3:-14562648 | None:intergenic |
| AAAGAATAAAGGAGCTGACA+TGG | 0.581041 | 6_3:-14561983 | None:intergenic |
| ACAAATTCAAACAAAGGCAA+TGG | 0.585184 | 6_3:+14562014 | Msa0941140:CDS |
| GCATGTGCAGGTGGAAGTGA+AGG | 0.607259 | 6_3:+14563931 | Msa0941140:intron |
| ACTATAGGATGCTAGAGAGA+GGG | 0.610819 | 6_3:+14564169 | Msa0941140:three_prime_UTR |
| TTGGCACCTCCCCTGAAAGA+GGG | 0.611782 | 6_3:-14561894 | None:intergenic |
| CTATAGGATGCTAGAGAGAG+GGG | 0.611985 | 6_3:+14564170 | Msa0941140:three_prime_UTR |
| TACTATAGGATGCTAGAGAG+AGG | 0.615370 | 6_3:+14564168 | Msa0941140:three_prime_UTR |
| AGATGGTTGCATTTCCAATG+TGG | 0.621268 | 6_3:-14560654 | None:intergenic |
| AAGTGAAGGACAAAGAAACA+TGG | 0.633365 | 6_3:+14563945 | Msa0941140:CDS |
| TGATAATCAAACTAAATCTG+AGG | 0.644716 | 6_3:+14562695 | Msa0941140:CDS |
| ATGCAACCCTCTTTCAGGGG+AGG | 0.645748 | 6_3:+14561888 | Msa0941140:CDS |
| TAATGTATATATACCTCATG+TGG | 0.645884 | 6_3:+14564291 | Msa0941140:three_prime_UTR |
| AGTGAAGGACAAAGAAACAT+GGG | 0.649441 | 6_3:+14563946 | Msa0941140:CDS |
| AAGGGAAAGGAAACCAAACA+AGG | 0.649891 | 6_3:+14564059 | Msa0941140:CDS |
| GGATTGCTTGAACTAAGACA+AGG | 0.667077 | 6_3:-14562609 | None:intergenic |
| GAACAACTTTGCAGACAAGG+TGG | 0.683163 | 6_3:+14564004 | Msa0941140:CDS |
| TATATGCAACCCTCTTTCAG+GGG | 0.686566 | 6_3:+14561885 | Msa0941140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATAATAAAATATAAAT+GGG | - | chr6_3:14563128-14563147 | None:intergenic | 0.0% |
| !! | AATTAATAATAAAATATAAA+TGG | - | chr6_3:14563129-14563148 | None:intergenic | 0.0% |
| !!! | ATTTTTTTTTTAAAAAAAAA+AGG | + | chr6_3:14564144-14564163 | Msa0941140:three_prime_UTR | 0.0% |
| !! | AAAAAAATTATTTACATCAT+TGG | - | chr6_3:14563670-14563689 | None:intergenic | 10.0% |
| !!! | TGATGTAAATAATTTTTTTT+TGG | + | chr6_3:14563671-14563690 | Msa0941140:intron | 10.0% |
| !!! | TAATTTTCTCAAATTATTAG+CGG | + | chr6_3:14561172-14561191 | Msa0941140:intron | 15.0% |
| !!! | TAATTTTTTTTGTACACTAA+TGG | + | chr6_3:14561679-14561698 | Msa0941140:intron | 15.0% |
| !! | AATATATAGAAGAAAGAATA+AGG | - | chr6_3:14562118-14562137 | None:intergenic | 15.0% |
| !!! | AACTAGTTAATTATTTTCAT+TGG | - | chr6_3:14562337-14562356 | None:intergenic | 15.0% |
| !!! | TAACTTTTACATCTAATAAT+CGG | + | chr6_3:14562361-14562380 | Msa0941140:intron | 15.0% |
| !! | AATAAATAAGTAAAAAGATG+AGG | - | chr6_3:14562408-14562427 | None:intergenic | 15.0% |
| !! | AAAAAATTTAAAAATCGAAC+AGG | - | chr6_3:14562497-14562516 | None:intergenic | 15.0% |
| !!! | AATAGTTTTACAATTTAACA+CGG | + | chr6_3:14562822-14562841 | Msa0941140:intron | 15.0% |
| !!! | ATTTTTCACAAAATATTACA+TGG | - | chr6_3:14562964-14562983 | None:intergenic | 15.0% |
| !! | ATAATAAAATATAAATGGGT+AGG | - | chr6_3:14563124-14563143 | None:intergenic | 15.0% |
| !! | ATTATTGAACATATATAAGT+TGG | + | chr6_3:14563419-14563438 | Msa0941140:intron | 15.0% |
| !! | TCAATCTACAATAATTTATA+AGG | + | chr6_3:14563482-14563501 | Msa0941140:intron | 15.0% |
| !! | TACAATAATTTATAAGGTAA+GGG | + | chr6_3:14563488-14563507 | Msa0941140:intron | 15.0% |
| !!! | ATAATTTTTTTTTGGTACAA+TGG | + | chr6_3:14563679-14563698 | Msa0941140:intron | 15.0% |
| !!! | AAGAAAGCATTAAAAATAAA+GGG | - | chr6_3:14564199-14564218 | None:intergenic | 15.0% |
| !! | AATCATTATGCTAATTATGA+AGG | - | chr6_3:14561060-14561079 | None:intergenic | 20.0% |
| !! | AATTTATAAACTATGAAGCA+CGG | - | chr6_3:14561239-14561258 | None:intergenic | 20.0% |
| !!! | CTTTAGTTCATATTTGAATT+TGG | - | chr6_3:14561518-14561537 | None:intergenic | 20.0% |
| !!! | TGTTTTGATGAAAAGAATAA+AGG | - | chr6_3:14561997-14562016 | None:intergenic | 20.0% |
| !! | ATCAAAACAAATTCAAACAA+AGG | + | chr6_3:14562008-14562027 | Msa0941140:CDS | 20.0% |
| !! | TAAAATGTTAAATATGAACC+TGG | - | chr6_3:14562090-14562109 | None:intergenic | 20.0% |
| !! | TTACATGGAGTTTATATATA+TGG | - | chr6_3:14562949-14562968 | None:intergenic | 20.0% |
| !!! | AATATTTTGTGAAAAATGTG+TGG | + | chr6_3:14562967-14562986 | Msa0941140:intron | 20.0% |
| !! | CTACAATAATTTATAAGGTA+AGG | + | chr6_3:14563487-14563506 | Msa0941140:intron | 20.0% |
| !!! | ATAAGTTATGGTCATTTTTT+GGG | - | chr6_3:14563568-14563587 | None:intergenic | 20.0% |
| !!! | TATAAGTTATGGTCATTTTT+TGG | - | chr6_3:14563569-14563588 | None:intergenic | 20.0% |
| !! | TTATTTACATCATTGGTATA+TGG | - | chr6_3:14563663-14563682 | None:intergenic | 20.0% |
| !!! | TTAATTTCTTTTTTCTCCAT+TGG | + | chr6_3:14563750-14563769 | Msa0941140:intron | 20.0% |
| !! | TTAATAGACTCAAATAATGA+AGG | + | chr6_3:14563778-14563797 | Msa0941140:intron | 20.0% |
| !!! | TAACTTGTCTTATTTTTTGT+GGG | - | chr6_3:14563810-14563829 | None:intergenic | 20.0% |
| !!! | ATAACTTGTCTTATTTTTTG+TGG | - | chr6_3:14563811-14563830 | None:intergenic | 20.0% |
| !! | AACATGAAACAATTATAGAA+GGG | + | chr6_3:14563850-14563869 | Msa0941140:intron | 20.0% |
| !! | GTTTATGAAGTATATCTATA+AGG | + | chr6_3:14563872-14563891 | Msa0941140:intron | 20.0% |
| !! | ACATCAATGTTACATATATT+TGG | - | chr6_3:14563900-14563919 | None:intergenic | 20.0% |
| !! | ATATATGTAACATTGATGTA+AGG | + | chr6_3:14563901-14563920 | Msa0941140:intron | 20.0% |
| !! | TAAAAAAAAAAGGCTACTAT+AGG | + | chr6_3:14564154-14564173 | Msa0941140:three_prime_UTR | 20.0% |
| !!! | GAAGAAAGCATTAAAAATAA+AGG | - | chr6_3:14564200-14564219 | None:intergenic | 20.0% |
| !! | TCTTGTTTCATTGAACTATA+AGG | - | chr6_3:14560680-14560699 | None:intergenic | 25.0% |
| ! | AGAGTTCAATTTAACAGAAT+GGG | + | chr6_3:14560706-14560725 | Msa0941140:CDS | 25.0% |
| !! | TTACCTTTTAATGTATATCC+AGG | - | chr6_3:14560863-14560882 | None:intergenic | 25.0% |
| ! | AAGATCAGTTTATAAAAGCT+GGG | + | chr6_3:14561804-14561823 | Msa0941140:intron | 25.0% |
| ! | GATTTGCATTAAATTCCAAA+TGG | + | chr6_3:14561845-14561864 | Msa0941140:CDS | 25.0% |
| ! | TTTACATTGTATACCAACTT+CGG | - | chr6_3:14562263-14562282 | None:intergenic | 25.0% |
| !! | TTTGTTATCGAGTTTAACAA+TGG | + | chr6_3:14562426-14562445 | Msa0941140:intron | 25.0% |
| !!! | TCATTTTTCTTTTCTGCATA+AGG | - | chr6_3:14562549-14562568 | None:intergenic | 25.0% |
| ! | TTATGCAGAAAAGAAAAATG+AGG | + | chr6_3:14562548-14562567 | Msa0941140:intron | 25.0% |
| ! | TATGCAGAAAAGAAAAATGA+GGG | + | chr6_3:14562549-14562568 | Msa0941140:intron | 25.0% |
| ! | TGATAATCAAACTAAATCTG+AGG | + | chr6_3:14562695-14562714 | Msa0941140:CDS | 25.0% |
| ! | ACGAAAGACATAAAATGTTT+CGG | - | chr6_3:14562779-14562798 | None:intergenic | 25.0% |
| ! | GAGTTTATATATATGGCTAT+TGG | - | chr6_3:14562942-14562961 | None:intergenic | 25.0% |
| ! | ATAAAATATAAATGGGTAGG+TGG | - | chr6_3:14563121-14563140 | None:intergenic | 25.0% |
| ! | CTCAAAAGGTTTGAAAAAAA+TGG | - | chr6_3:14563531-14563550 | None:intergenic | 25.0% |
| ! | TTGTTTCATGTTGTTGTAAT+AGG | - | chr6_3:14563842-14563861 | None:intergenic | 25.0% |
| ! | CAACATGAAACAATTATAGA+AGG | + | chr6_3:14563849-14563868 | Msa0941140:intron | 25.0% |
| ! | ATAAGGAAGAAAAAGATGAA+AGG | + | chr6_3:14564040-14564059 | Msa0941140:CDS | 25.0% |
| ! | TAAGGAAGAAAAAGATGAAA+GGG | + | chr6_3:14564041-14564060 | Msa0941140:CDS | 25.0% |
| ! | ATATGCTATTATTCCTTGTT+TGG | - | chr6_3:14564075-14564094 | None:intergenic | 25.0% |
| ! | TAATGTATATATACCTCATG+TGG | + | chr6_3:14564291-14564310 | Msa0941140:three_prime_UTR | 25.0% |
| !! | GAAAAGTTCTGAAAAACACA+TGG | + | chr6_3:14560628-14560647 | Msa0941140:exon | 30.0% |
| TTCATTGAACTATAAGGAGA+TGG | - | chr6_3:14560674-14560693 | None:intergenic | 30.0% | |
| CAGAGTTCAATTTAACAGAA+TGG | + | chr6_3:14560705-14560724 | Msa0941140:CDS | 30.0% | |
| GAGTTCAATTTAACAGAATG+GGG | + | chr6_3:14560707-14560726 | Msa0941140:CDS | 30.0% | |
| TCTCCTGGATATACATTAAA+AGG | + | chr6_3:14560857-14560876 | Msa0941140:CDS | 30.0% | |
| ! | TAGTGAAAGAATAGGTTGAA+GGG | - | chr6_3:14561007-14561026 | None:intergenic | 30.0% |
| TATGAAGGTAGTTCATTCTT+TGG | - | chr6_3:14561045-14561064 | None:intergenic | 30.0% | |
| TTCAGTGTAATTACAAGTGT+CGG | - | chr6_3:14561147-14561166 | None:intergenic | 30.0% | |
| TAGCGAGATTAATATAATCG+TGG | - | chr6_3:14561579-14561598 | None:intergenic | 30.0% | |
| CATGAAATTGGTTGACAAAT+AGG | - | chr6_3:14561760-14561779 | None:intergenic | 30.0% | |
| CTATTTGTCAACCAATTTCA+TGG | + | chr6_3:14561758-14561777 | Msa0941140:intron | 30.0% | |
| GCAATATATCACCATGAAAT+TGG | - | chr6_3:14561772-14561791 | None:intergenic | 30.0% | |
| CAAGATCAGTTTATAAAAGC+TGG | + | chr6_3:14561803-14561822 | Msa0941140:intron | 30.0% | |
| GAATTTAATGCAAATCCATC+TGG | - | chr6_3:14561841-14561860 | None:intergenic | 30.0% | |
| TTTGCAGATAAACATTCCAT+TGG | - | chr6_3:14561916-14561935 | None:intergenic | 30.0% | |
| TTATCTGCAAAAACTCTTAG+TGG | + | chr6_3:14561925-14561944 | Msa0941140:CDS | 30.0% | |
| ACAAATTCAAACAAAGGCAA+TGG | + | chr6_3:14562014-14562033 | Msa0941140:CDS | 30.0% | |
| ! | TTTTTGGATCATGGTTCATT+CGG | - | chr6_3:14562457-14562476 | None:intergenic | 30.0% |
| ! | GATCATACCACTGATATTTT+TGG | - | chr6_3:14562473-14562492 | None:intergenic | 30.0% |
| ! | ATTTGTTGACATCTCTACAA+TGG | - | chr6_3:14562655-14562674 | None:intergenic | 30.0% |
| AAGACTTGATTCTCTTATCT+TGG | - | chr6_3:14562915-14562934 | None:intergenic | 30.0% | |
| TTGTGAAAAATGTGTGGTAT+AGG | + | chr6_3:14562973-14562992 | Msa0941140:intron | 30.0% | |
| TAGGACGTACTAGATATATT+TGG | + | chr6_3:14562992-14563011 | Msa0941140:intron | 30.0% | |
| !! | ATCATGGTACGAATTTTGAT+TGG | - | chr6_3:14563271-14563290 | None:intergenic | 30.0% |
| ATCTTCTCAAACAATCAAAC+GGG | - | chr6_3:14563336-14563355 | None:intergenic | 30.0% | |
| GATCTTCTCAAACAATCAAA+CGG | - | chr6_3:14563337-14563356 | None:intergenic | 30.0% | |
| TTGATATAAGTAGCTACTAG+TGG | + | chr6_3:14563384-14563403 | Msa0941140:intron | 30.0% | |
| TCAAGATAATGTGTCTCAAA+AGG | - | chr6_3:14563545-14563564 | None:intergenic | 30.0% | |
| AAATGACCATAACTTATACG+TGG | + | chr6_3:14563571-14563590 | Msa0941140:intron | 30.0% | |
| AAGAAAAAGATGAAAGGGAA+AGG | + | chr6_3:14564046-14564065 | Msa0941140:CDS | 30.0% | |
| ACATAAAAATGTACCACATG+AGG | - | chr6_3:14564307-14564326 | None:intergenic | 30.0% | |
| !!! | CAGAACTTTTCTAAAGCTCA+AGG | - | chr6_3:14560619-14560638 | None:intergenic | 35.0% |
| ! | GTAGTGAAAGAATAGGTTGA+AGG | - | chr6_3:14561008-14561027 | None:intergenic | 35.0% |
| AAGAGCAGTAGTGAAAGAAT+AGG | - | chr6_3:14561015-14561034 | None:intergenic | 35.0% | |
| TCTTTCACTACTGCTCTTAA+AGG | + | chr6_3:14561017-14561036 | Msa0941140:intron | 35.0% | |
| TCTCAAATTATTAGCGGTGT+CGG | + | chr6_3:14561178-14561197 | Msa0941140:intron | 35.0% | |
| TAAACTATGAAGCACGGATA+CGG | - | chr6_3:14561233-14561252 | None:intergenic | 35.0% | |
| CTAACTTGACAAAATCACGA+TGG | + | chr6_3:14561398-14561417 | Msa0941140:intron | 35.0% | |
| TGAGAATGACAAAATCATGG+TGG | - | chr6_3:14561493-14561512 | None:intergenic | 35.0% | |
| GAGTGAGAATGACAAAATCA+TGG | - | chr6_3:14561496-14561515 | None:intergenic | 35.0% | |
| AGTTTCTGTCAAAATCACGA+TGG | + | chr6_3:14561549-14561568 | Msa0941140:intron | 35.0% | |
| ! | CTTTTCTGCTTCATTCCATT+TGG | - | chr6_3:14561863-14561882 | None:intergenic | 35.0% |
| TATATATGCAACCCTCTTTC+AGG | + | chr6_3:14561883-14561902 | Msa0941140:CDS | 35.0% | |
| ATATATGCAACCCTCTTTCA+GGG | + | chr6_3:14561884-14561903 | Msa0941140:CDS | 35.0% | |
| AAAGAATAAAGGAGCTGACA+TGG | - | chr6_3:14561986-14562005 | None:intergenic | 35.0% | |
| !! | ATAAGACCAAGGTATTGTAC+CGG | - | chr6_3:14562226-14562245 | None:intergenic | 35.0% |
| !! | TACCTTGGTCTTATTGAACA+AGG | + | chr6_3:14562232-14562251 | Msa0941140:intron | 35.0% |
| AACCTTGTTCAATAAGACCA+AGG | - | chr6_3:14562237-14562256 | None:intergenic | 35.0% | |
| !!! | CCACTGATATTTTTGGATCA+TGG | - | chr6_3:14562466-14562485 | None:intergenic | 35.0% |
| CCATGATCCAAAAATATCAG+TGG | + | chr6_3:14562463-14562482 | Msa0941140:intron | 35.0% | |
| GATGGAGTTAAATTAGTGCT+TGG | - | chr6_3:14562633-14562652 | None:intergenic | 35.0% | |
| TCAAACTAAATCTGAGGAAG+AGG | + | chr6_3:14562701-14562720 | Msa0941140:CDS | 35.0% | |
| GTCCAATTGAAACAGAGATA+GGG | - | chr6_3:14563019-14563038 | None:intergenic | 35.0% | |
| TGTCCAATTGAAACAGAGAT+AGG | - | chr6_3:14563020-14563039 | None:intergenic | 35.0% | |
| TGTGTAGACAGCAAAAAACT+CGG | - | chr6_3:14563082-14563101 | None:intergenic | 35.0% | |
| !!! | TGGTACGAATTTTGATTGGA+GGG | - | chr6_3:14563267-14563286 | None:intergenic | 35.0% |
| !!! | ATGGTACGAATTTTGATTGG+AGG | - | chr6_3:14563268-14563287 | None:intergenic | 35.0% |
| TCTCACGATATAACGAATCA+TGG | - | chr6_3:14563287-14563306 | None:intergenic | 35.0% | |
| TCTTCTCAAACAATCAAACG+GGG | - | chr6_3:14563335-14563354 | None:intergenic | 35.0% | |
| AAGCAACCACGTATAAGTTA+TGG | - | chr6_3:14563580-14563599 | None:intergenic | 35.0% | |
| AAGTGAAGGACAAAGAAACA+TGG | + | chr6_3:14563945-14563964 | Msa0941140:CDS | 35.0% | |
| AGTGAAGGACAAAGAAACAT+GGG | + | chr6_3:14563946-14563965 | Msa0941140:CDS | 35.0% | |
| AAAACACATGGCTTCCACAT+TGG | + | chr6_3:14560640-14560659 | Msa0941140:exon | 40.0% | |
| AGATGGTTGCATTTCCAATG+TGG | - | chr6_3:14560657-14560676 | None:intergenic | 40.0% | |
| AGAAGAAGCAGTGCTAGAAA+TGG | - | chr6_3:14560840-14560859 | None:intergenic | 40.0% | |
| ACAATCAAATTGTGCACGTG+CGG | + | chr6_3:14561308-14561327 | Msa0941140:intron | 40.0% | |
| ACATGCACTCGTCAAAATCA+CGG | - | chr6_3:14561367-14561386 | None:intergenic | 40.0% | |
| AAAATCGCATTAAGCCACGT+TGG | + | chr6_3:14561422-14561441 | Msa0941140:intron | 40.0% | |
| TATATGCAACCCTCTTTCAG+GGG | + | chr6_3:14561885-14561904 | Msa0941140:CDS | 40.0% | |
| GCTCTTCAATTTCATAGTCC+AGG | + | chr6_3:14562069-14562088 | Msa0941140:CDS | 40.0% | |
| !! | TAAGACCAAGGTATTGTACC+GGG | - | chr6_3:14562225-14562244 | None:intergenic | 40.0% |
| GGATTGCTTGAACTAAGACA+AGG | - | chr6_3:14562612-14562631 | None:intergenic | 40.0% | |
| GTTGACATCTCTACAATGGA+TGG | - | chr6_3:14562651-14562670 | None:intergenic | 40.0% | |
| GTCCCTATCTCTGTTTCAAT+TGG | + | chr6_3:14563014-14563033 | Msa0941140:intron | 40.0% | |
| TGTAGACAGCAAAAAACTCG+GGG | - | chr6_3:14563080-14563099 | None:intergenic | 40.0% | |
| GTGTAGACAGCAAAAAACTC+GGG | - | chr6_3:14563081-14563100 | None:intergenic | 40.0% | |
| !!! | ACGAATTTTGATTGGAGGGT+TGG | - | chr6_3:14563263-14563282 | None:intergenic | 40.0% |
| GAGTCTATTAACTACGCCAA+TGG | - | chr6_3:14563769-14563788 | None:intergenic | 40.0% | |
| TAAGGTACAAATGCATGTGC+AGG | + | chr6_3:14563919-14563938 | Msa0941140:intron | 40.0% | |
| GATGAACAACTTTGCAGACA+AGG | + | chr6_3:14564001-14564020 | Msa0941140:CDS | 40.0% | |
| !!! | GTGGTTGCTTTTCATGGATA+AGG | + | chr6_3:14564023-14564042 | Msa0941140:CDS | 40.0% |
| AAGGGAAAGGAAACCAAACA+AGG | + | chr6_3:14564059-14564078 | Msa0941140:CDS | 40.0% | |
| TACTATAGGATGCTAGAGAG+AGG | + | chr6_3:14564168-14564187 | Msa0941140:three_prime_UTR | 40.0% | |
| ACTATAGGATGCTAGAGAGA+GGG | + | chr6_3:14564169-14564188 | Msa0941140:three_prime_UTR | 40.0% | |
| CTATGTAGTACAGCACTCCT+CGG | + | chr6_3:14561086-14561105 | Msa0941140:intron | 45.0% | |
| TGAAGCACGGATACGGATAT+CGG | - | chr6_3:14561226-14561245 | None:intergenic | 45.0% | |
| CAATCAAATTGTGCACGTGC+GGG | + | chr6_3:14561309-14561328 | Msa0941140:intron | 45.0% | |
| CGGTGAGCTCTGTAAAATCA+TGG | + | chr6_3:14561336-14561355 | Msa0941140:intron | 45.0% | |
| !! | TGGGAGTGTTTATCACCAGA+TGG | + | chr6_3:14561823-14561842 | Msa0941140:intron | 45.0% |
| TAGTTGAAGCGAGAACCCAT+CGG | + | chr6_3:14562181-14562200 | Msa0941140:intron | 45.0% | |
| !! | AAGACCAAGGTATTGTACCG+GGG | - | chr6_3:14562224-14562243 | None:intergenic | 45.0% |
| GAACAAGGTTGAACCGAAGT+TGG | + | chr6_3:14562247-14562266 | Msa0941140:intron | 45.0% | |
| ! | TGGACATGCCACTCAAGTTT+TGG | + | chr6_3:14563034-14563053 | Msa0941140:intron | 45.0% |
| CAAAAAACTCGGGGAGAGTA+TGG | - | chr6_3:14563071-14563090 | None:intergenic | 45.0% | |
| TCAAACGGGGTGAAGTCTAA+CGG | - | chr6_3:14563322-14563341 | None:intergenic | 45.0% | |
| GAACAACTTTGCAGACAAGG+TGG | + | chr6_3:14564004-14564023 | Msa0941140:CDS | 45.0% | |
| !!! | GACAAGGTGGTTGCTTTTCA+TGG | + | chr6_3:14564017-14564036 | Msa0941140:CDS | 45.0% |
| CTATAGGATGCTAGAGAGAG+GGG | + | chr6_3:14564170-14564189 | Msa0941140:three_prime_UTR | 45.0% | |
| TCTAGCACTGCTTCTTCTCC+TGG | + | chr6_3:14560842-14560861 | Msa0941140:CDS | 50.0% | |
| ! | TCCTCGGATTAGACGTGTTC+CGG | + | chr6_3:14561102-14561121 | Msa0941140:intron | 50.0% |
| ATCGGACACAACACAGACAC+TGG | - | chr6_3:14561208-14561227 | None:intergenic | 50.0% | |
| AAGTTTCAGCGACACCAACG+TGG | - | chr6_3:14561439-14561458 | None:intergenic | 50.0% | |
| AGACCAACGAGTGAACCGAT+GGG | - | chr6_3:14562199-14562218 | None:intergenic | 50.0% | |
| ! | ACTCGGGGAGAGTATGGATA+CGG | - | chr6_3:14563065-14563084 | None:intergenic | 50.0% |
| GGTACAAATGCATGTGCAGG+TGG | + | chr6_3:14563922-14563941 | Msa0941140:intron | 50.0% | |
| ACCGGAACACGTCTAATCCG+AGG | - | chr6_3:14561106-14561125 | None:intergenic | 55.0% | |
| ACACGACACATGTCGGACAC+CGG | - | chr6_3:14561124-14561143 | None:intergenic | 55.0% | |
| GTGTCGGACACGACACATGT+CGG | - | chr6_3:14561131-14561150 | None:intergenic | 55.0% | |
| ATGCAACCCTCTTTCAGGGG+AGG | + | chr6_3:14561888-14561907 | Msa0941140:CDS | 55.0% | |
| TTGGCACCTCCCCTGAAAGA+GGG | - | chr6_3:14561897-14561916 | None:intergenic | 55.0% | |
| ATTGGCACCTCCCCTGAAAG+AGG | - | chr6_3:14561898-14561917 | None:intergenic | 55.0% | |
| !! | TCTTTCAGGGGAGGTGCCAA+TGG | + | chr6_3:14561897-14561916 | Msa0941140:CDS | 55.0% |
| !! | GAACCCATCGGTTCACTCGT+TGG | + | chr6_3:14562193-14562212 | Msa0941140:intron | 55.0% |
| CAGACCAACGAGTGAACCGA+TGG | - | chr6_3:14562200-14562219 | None:intergenic | 55.0% | |
| ! | TTCACTCGTTGGTCTGACCC+CGG | + | chr6_3:14562204-14562223 | Msa0941140:intron | 55.0% |
| CTGACCCCGGTACAATACCT+TGG | + | chr6_3:14562217-14562236 | Msa0941140:intron | 55.0% | |
| CGGAGGGACCAAAACTTGAG+TGG | - | chr6_3:14563045-14563064 | None:intergenic | 55.0% | |
| ! | GGGGAGAGTATGGATACGGA+GGG | - | chr6_3:14563061-14563080 | None:intergenic | 55.0% |
| GCATGTGCAGGTGGAAGTGA+AGG | + | chr6_3:14563931-14563950 | Msa0941140:intron | 55.0% | |
| ATTGTGCACGTGCGGGTGAG+CGG | + | chr6_3:14561316-14561335 | Msa0941140:intron | 60.0% | |
| ! | CGGGGAGAGTATGGATACGG+AGG | - | chr6_3:14563062-14563081 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 14560612 | 14564365 | 14560612 | ID=Msa0941140;Name=Msa0941140 |
| chr6_3 | mRNA | 14560612 | 14564365 | 14560612 | ID=Msa0941140-mRNA-1;Parent=Msa0941140;Name=Msa0941140-mRNA-1;_AED=0.26;_eAED=0.26;_QI=35|0.33|0.5|1|0.66|0.75|4|248|265 |
| chr6_3 | exon | 14560612 | 14560878 | 14560612 | ID=Msa0941140-mRNA-1:exon:4508;Parent=Msa0941140-mRNA-1 |
| chr6_3 | exon | 14561842 | 14562090 | 14561842 | ID=Msa0941140-mRNA-1:exon:4509;Parent=Msa0941140-mRNA-1 |
| chr6_3 | exon | 14562583 | 14562722 | 14562583 | ID=Msa0941140-mRNA-1:exon:4510;Parent=Msa0941140-mRNA-1 |
| chr6_3 | exon | 14563941 | 14564365 | 14563941 | ID=Msa0941140-mRNA-1:exon:4511;Parent=Msa0941140-mRNA-1 |
| chr6_3 | five_prime_UTR | 14560612 | 14560646 | 14560612 | ID=Msa0941140-mRNA-1:five_prime_utr;Parent=Msa0941140-mRNA-1 |
| chr6_3 | CDS | 14560647 | 14560878 | 14560647 | ID=Msa0941140-mRNA-1:cds;Parent=Msa0941140-mRNA-1 |
| chr6_3 | CDS | 14561842 | 14562090 | 14561842 | ID=Msa0941140-mRNA-1:cds;Parent=Msa0941140-mRNA-1 |
| chr6_3 | CDS | 14562583 | 14562722 | 14562583 | ID=Msa0941140-mRNA-1:cds;Parent=Msa0941140-mRNA-1 |
| chr6_3 | CDS | 14563941 | 14564117 | 14563941 | ID=Msa0941140-mRNA-1:cds;Parent=Msa0941140-mRNA-1 |
| chr6_3 | three_prime_UTR | 14564118 | 14564365 | 14564118 | ID=Msa0941140-mRNA-1:three_prime_utr;Parent=Msa0941140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
