AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003076


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003076.t1 MTR_2g426090 79.241 395 51 3 1 365 1 394 0.0 613
MS.gene003076.t1 MTR_2g426070 74.010 404 65 9 1 368 1 400 0.0 563
MS.gene003076.t1 MTR_2g426060 66.334 401 96 6 1 366 1 397 0.0 510
MS.gene003076.t1 MTR_2g425980 63.840 401 106 6 1 366 1 397 3.12e-174 491
MS.gene003076.t1 MTR_2g025420 60.723 415 111 8 1 366 1 412 1.01e-162 462
MS.gene003076.t1 MTR_2g426020 60.794 403 115 7 1 366 1 397 2.05e-162 461
MS.gene003076.t1 MTR_2g028130 61.800 411 101 12 1 362 1 404 1.74e-159 454
MS.gene003076.t1 MTR_2g028110 60.969 392 114 8 3 368 2 380 1.96e-158 450
MS.gene003076.t1 MTR_0667s0010 61.071 411 101 12 1 366 1 397 2.55e-157 448
MS.gene003076.t1 MTR_3g083010 58.950 419 114 13 1 366 1 414 2.83e-154 441
MS.gene003076.t1 MTR_2g028140 58.049 410 124 9 1 366 1 406 5.24e-152 435
MS.gene003076.t1 MTR_2g028160 56.280 414 121 13 1 362 1 406 7.65e-141 407
MS.gene003076.t1 MTR_2g031640 55.911 406 117 11 1 368 1 382 2.42e-140 404
MS.gene003076.t1 MTR_8g099460 57.990 388 120 9 1 356 1 377 1.27e-137 398
MS.gene003076.t1 MTR_2g024100 57.789 398 110 10 11 362 13 398 1.27e-137 398
MS.gene003076.t1 MTR_2g031720 55.556 405 120 10 1 366 1 384 8.20e-137 395
MS.gene003076.t1 MTR_4g070550 54.545 407 136 9 1 365 1 400 1.39e-136 395
MS.gene003076.t1 MTR_2g021050 54.612 412 108 11 1 366 1 379 1.12e-134 389
MS.gene003076.t1 MTR_2g031680 54.863 401 122 9 1 366 1 377 5.82e-132 383
MS.gene003076.t1 MTR_2g025960 63.871 310 70 6 96 366 1 307 4.34e-128 370
MS.gene003076.t1 MTR_2g026010 55.076 394 114 12 3 356 2 372 1.11e-124 365
MS.gene003076.t1 MTR_1g068835 54.315 394 118 13 3 362 2 367 5.07e-122 357
MS.gene003076.t1 MTR_1g068875 55.725 393 113 13 3 362 2 366 3.56e-121 355
MS.gene003076.t1 MTR_1g068860 54.198 393 120 14 4 362 3 369 2.93e-116 342
MS.gene003076.t1 MTR_2g031700 53.279 366 94 9 1 366 1 289 4.74e-113 331
MS.gene003076.t1 MTR_2g024110 50.382 393 121 15 7 352 5 370 8.54e-107 318
MS.gene003076.t1 MTR_1g068905 48.767 365 120 13 3 362 2 304 7.86e-92 278
MS.gene003076.t1 MTR_4g006270 42.469 405 139 13 7 359 5 367 5.98e-85 263
MS.gene003076.t1 MTR_4g133170 38.182 385 186 10 7 359 5 369 1.37e-75 239
MS.gene003076.t1 MTR_2g040050 39.231 260 102 12 59 306 7 222 5.17e-44 152
MS.gene003076.t1 MTR_2g037520 57.718 149 26 3 220 331 1 149 6.49e-44 150
MS.gene003076.t1 MTR_7g110360 36.676 349 146 12 7 348 40 320 3.74e-43 152
MS.gene003076.t1 MTR_5g083940 35.734 361 109 13 3 328 2 274 6.82e-43 152
MS.gene003076.t1 MTR_2g022170 57.664 137 39 5 8 143 6 124 2.42e-40 139
MS.gene003076.t1 MTR_2g025440 50.000 134 28 4 270 367 1 131 1.37e-31 119
MS.gene003076.t1 MTR_2g021150 29.659 381 201 15 7 346 15 369 1.05e-29 117
MS.gene003076.t1 MTR_2g028120 72.000 75 19 2 295 368 7 80 5.89e-28 105
MS.gene003076.t1 MTR_3g006670 28.239 301 171 8 7 293 50 319 5.40e-26 108
MS.gene003076.t1 MTR_2g078900 28.667 300 164 14 7 293 34 296 9.78e-25 103
MS.gene003076.t1 MTR_3g007330 26.829 287 166 11 7 281 49 303 1.77e-23 100
MS.gene003076.t1 MTR_2g021190 28.086 324 179 14 7 311 22 310 3.85e-23 99.8
MS.gene003076.t1 MTR_6g086825 25.515 388 207 18 1 325 65 433 5.48e-23 100
MS.gene003076.t1 MTR_4g030830 26.724 348 205 12 5 325 8 332 1.30e-22 98.6
MS.gene003076.t1 MTR_3g086960 41.830 153 47 4 237 349 3 153 1.79e-22 92.8
MS.gene003076.t1 MTR_2g046900 27.532 385 210 17 7 348 29 387 1.84e-22 97.8
MS.gene003076.t1 MTR_2g021155 28.378 296 173 12 8 293 38 304 3.57e-22 98.6
MS.gene003076.t1 MTR_5g046300 26.524 328 197 14 7 324 5 298 4.84e-22 96.3
MS.gene003076.t1 MTR_5g046290 26.524 328 197 14 7 324 5 298 4.84e-22 96.3
MS.gene003076.t1 MTR_3g014570 25.581 301 178 9 7 293 30 298 5.97e-22 96.3
MS.gene003076.t1 MTR_3g009310 28.428 299 170 12 7 293 43 309 9.33e-22 95.9
MS.gene003076.t1 MTR_6g065980 28.231 294 163 14 7 293 17 269 9.87e-22 95.5
MS.gene003076.t1 MTR_3g034180 26.829 328 189 14 7 311 124 423 1.02e-21 96.7
MS.gene003076.t1 MTR_1g088120 28.395 324 167 12 9 294 13 309 1.08e-21 95.9
MS.gene003076.t1 MTR_1g050542 26.115 314 198 9 7 316 59 342 1.11e-21 95.9
MS.gene003076.t1 MTR_3g086970 36.404 228 84 11 3 228 2 170 3.22e-21 90.1
MS.gene003076.t1 MTR_4g030090 25.602 332 207 12 5 315 13 325 4.57e-21 94.0
MS.gene003076.t1 MTR_3g007270 27.907 301 181 11 7 293 48 326 6.85e-21 93.6
MS.gene003076.t1 MTR_3g010390 26.733 303 188 10 7 293 34 318 7.39e-21 93.6
MS.gene003076.t1 MTR_3g034160 25.688 327 192 12 7 310 10 308 9.34e-21 92.8
MS.gene003076.t1 MTR_2g046920 25.197 381 216 13 7 348 25 375 1.06e-20 92.8
MS.gene003076.t1 MTR_6g055210 27.056 377 224 15 7 357 23 374 1.13e-20 93.2
MS.gene003076.t1 MTR_1g056710 27.969 261 160 10 7 261 35 273 1.45e-20 92.4
MS.gene003076.t1 MTR_1g054575 27.900 319 192 10 5 316 51 338 1.53e-20 93.6
MS.gene003076.t1 MTR_4g023120 30.827 266 144 8 7 262 4 239 1.85e-20 92.0
MS.gene003076.t1 MTR_5g011200 26.198 313 196 13 7 309 18 305 2.85e-20 91.3
MS.gene003076.t1 MTR_1g097490 28.169 355 186 16 7 326 50 370 2.96e-20 91.7
MS.gene003076.t1 MTR_3g007360 28.826 281 171 11 9 281 55 314 4.45e-20 91.3
MS.gene003076.t1 MTR_3g007410 29.167 288 161 13 9 281 55 314 1.05e-19 90.1
MS.gene003076.t1 MTR_1g094210 27.517 298 173 11 1 288 49 313 1.24e-19 90.1
MS.gene003076.t1 MTR_1g094210 27.517 298 173 11 1 288 49 313 1.26e-19 89.7
MS.gene003076.t1 MTR_4g023070 29.889 271 140 8 7 262 4 239 1.45e-19 89.4
MS.gene003076.t1 MTR_4g031770 25.000 300 180 10 7 293 5 272 1.47e-19 89.4
MS.gene003076.t1 MTR_8g064890 27.575 301 170 16 14 289 24 301 1.73e-19 89.4
MS.gene003076.t1 MTR_3g014540 24.675 385 211 14 7 347 30 379 1.87e-19 89.4
MS.gene003076.t1 MTR_1g055070 28.622 283 160 13 7 268 50 311 2.38e-19 89.0
MS.gene003076.t1 MTR_2g021210 28.939 311 182 13 7 311 85 362 2.63e-19 89.0
MS.gene003076.t1 MTR_5g057710 28.169 284 169 10 7 280 47 305 2.85e-19 89.0
MS.gene003076.t1 MTR_1g055135 27.707 314 172 13 3 293 7 288 2.89e-19 88.6
MS.gene003076.t1 MTR_3g036290 25.405 370 205 12 7 359 23 338 5.52e-19 87.4
MS.gene003076.t1 MTR_3g009240 26.510 298 173 12 7 293 37 299 6.91e-19 87.4
MS.gene003076.t1 MTR_4g061340 26.062 353 194 13 7 338 27 333 7.75e-19 87.4
MS.gene003076.t1 MTR_3g007430 25.352 284 174 10 8 279 45 302 9.12e-19 87.0
MS.gene003076.t1 MTR_3g024040 26.354 277 158 10 13 281 38 276 9.96e-19 87.0
MS.gene003076.t1 MTR_5g070080 27.545 334 179 13 7 307 11 314 1.09e-18 87.0
MS.gene003076.t1 MTR_7g407070 25.161 310 187 11 7 293 33 320 1.10e-18 87.0
MS.gene003076.t1 MTR_2g029990 25.084 299 183 11 7 293 52 321 1.20e-18 87.0
MS.gene003076.t1 MTR_1g097330 25.982 331 188 14 5 315 15 308 1.45e-18 87.0
MS.gene003076.t1 MTR_3g034130 26.543 324 193 13 7 310 10 308 1.49e-18 86.3
MS.gene003076.t1 MTR_4g130330 24.064 374 219 13 2 324 3 362 1.50e-18 86.7
MS.gene003076.t1 MTR_7g078900 26.686 341 198 14 9 314 15 338 1.65e-18 86.7
MS.gene003076.t1 MTR_3g013740 24.595 309 183 8 7 293 45 325 1.67e-18 86.7
MS.gene003076.t1 MTR_5g057790 28.169 284 169 11 7 280 47 305 1.93e-18 86.3
MS.gene003076.t1 MTR_6g053260 25.817 306 182 11 7 297 338 613 2.11e-18 87.0
MS.gene003076.t1 MTR_3g024130 28.500 200 117 6 97 293 57 233 2.76e-18 85.1
MS.gene003076.t1 MTR_4g055060 24.828 290 184 7 5 281 29 297 3.03e-18 85.9
MS.gene003076.t1 MTR_4g023080 27.129 317 180 12 7 310 10 288 3.08e-18 85.5
MS.gene003076.t1 MTR_3g006570 29.097 299 168 13 7 293 22 288 3.42e-18 85.5
MS.gene003076.t1 MTR_1g097560 24.282 383 220 14 1 347 27 375 3.68e-18 85.5
MS.gene003076.t1 MTR_6g004660 28.354 328 192 16 7 315 17 320 4.80e-18 85.1
MS.gene003076.t1 MTR_3g013770 26.384 307 172 13 7 293 34 306 6.82e-18 84.7
MS.gene003076.t1 MTR_7g066850 28.527 319 165 18 5 294 22 306 8.14e-18 85.1
MS.gene003076.t1 MTR_7g013590 26.706 337 208 13 8 332 38 347 8.89e-18 84.3
MS.gene003076.t1 MTR_7g077070 27.729 339 176 14 1 294 11 325 9.29e-18 84.7
MS.gene003076.t1 MTR_7g445890 24.104 307 182 10 5 294 15 287 9.49e-18 84.3
MS.gene003076.t1 MTR_8g101580 26.644 289 177 11 4 285 44 304 1.12e-17 84.0
MS.gene003076.t1 MTR_6g053240 25.597 293 171 10 7 281 29 292 1.12e-17 84.0
MS.gene003076.t1 MTR_3g009260 25.733 307 159 10 8 293 43 301 1.41e-17 83.6
MS.gene003076.t1 MTR_4g013180 25.890 309 189 11 7 294 12 301 1.49e-17 84.3
MS.gene003076.t1 MTR_3g103020 26.036 338 213 12 7 332 21 333 2.20e-17 83.2
MS.gene003076.t1 MTR_2g021252 24.749 299 168 10 8 293 49 303 2.48e-17 82.8
MS.gene003076.t1 MTR_3g058470 24.033 362 230 11 7 348 38 374 3.46e-17 82.4
MS.gene003076.t1 MTR_5g046260 25.424 295 149 13 7 293 5 236 3.63e-17 81.3
MS.gene003076.t1 MTR_2g043410 27.778 342 180 17 9 314 25 335 4.08e-17 82.4
MS.gene003076.t1 MTR_4g023440 28.755 233 129 9 7 231 19 222 4.26e-17 81.6
MS.gene003076.t1 MTR_4g037465 24.642 349 219 10 2 333 14 335 4.87e-17 82.0
MS.gene003076.t1 MTR_6g080680 26.064 376 210 19 1 327 14 370 5.75e-17 82.0
MS.gene003076.t1 MTR_3g436150 27.759 299 187 12 7 293 33 314 5.95e-17 82.0
MS.gene003076.t1 MTR_4g116330 25.786 318 191 12 7 310 24 310 7.22e-17 81.6
MS.gene003076.t1 MTR_7g056820 28.302 318 164 13 7 294 8 291 8.24e-17 81.3
MS.gene003076.t1 MTR_3g011100 27.184 309 167 14 7 293 236 508 9.44e-17 82.0
MS.gene003076.t1 MTR_4g019990 25.146 342 209 12 1 315 1 322 9.92e-17 81.3
MS.gene003076.t1 MTR_1g054725 25.902 305 176 12 7 293 21 293 1.18e-16 80.9
MS.gene003076.t1 MTR_5g057690 25.641 312 180 10 7 306 47 318 1.34e-16 80.9
MS.gene003076.t1 MTR_8g013010 29.897 291 153 14 7 278 55 313 1.41e-16 80.1
MS.gene003076.t1 MTR_7g070440 24.920 313 208 12 13 314 14 310 1.60e-16 80.5
MS.gene003076.t1 MTR_0242s0060 26.543 324 177 12 7 294 10 308 1.90e-16 80.5
MS.gene003076.t1 MTR_0242s0040 26.543 324 177 12 7 294 10 308 1.90e-16 80.5
MS.gene003076.t1 MTR_6g079810 25.132 378 212 13 7 325 71 436 1.96e-16 80.9
MS.gene003076.t1 MTR_4g021785 28.763 299 162 14 7 293 10 269 2.02e-16 80.1
MS.gene003076.t1 MTR_6g016285 25.441 397 239 13 7 367 22 397 2.16e-16 80.5
MS.gene003076.t1 MTR_3g030310 24.333 300 186 12 7 293 22 293 2.45e-16 80.1
MS.gene003076.t1 MTR_0760s0010 29.032 279 150 13 13 281 54 294 2.82e-16 79.7
MS.gene003076.t1 MTR_7g070830 32.618 233 102 10 7 208 22 230 2.83e-16 80.1
MS.gene003076.t1 MTR_7g091630 24.814 403 217 15 7 361 33 397 2.97e-16 80.1
MS.gene003076.t1 MTR_3g030350 25.249 301 174 12 7 293 36 299 3.61e-16 79.7
MS.gene003076.t1 MTR_0044s0300 26.159 302 170 16 7 293 39 302 3.73e-16 79.7
MS.gene003076.t1 MTR_7g056290 27.246 345 183 16 9 314 25 340 4.18e-16 79.7
MS.gene003076.t1 MTR_7g055987 26.300 327 186 14 9 314 23 315 4.32e-16 79.3
MS.gene003076.t1 MTR_0054s0090 25.341 367 204 17 14 324 25 377 4.40e-16 79.3
MS.gene003076.t1 MTR_3g058480 26.136 264 164 7 7 260 40 282 4.87e-16 78.6
MS.gene003076.t1 MTR_7g070880 33.482 224 112 10 7 208 22 230 5.12e-16 79.3
MS.gene003076.t1 MTR_3g464470 25.228 329 199 14 7 314 8 310 5.52e-16 79.0
MS.gene003076.t1 MTR_6g048120 25.000 316 206 12 7 311 37 332 5.89e-16 79.0
MS.gene003076.t1 MTR_0464s0020 25.356 351 189 15 9 314 26 348 6.72e-16 79.0
MS.gene003076.t1 MTR_7g061060 26.074 349 186 17 7 324 14 321 7.75e-16 78.6
MS.gene003076.t1 MTR_3g010920 26.712 292 166 11 7 293 45 293 8.06e-16 78.6
MS.gene003076.t1 MTR_2g025995 72.727 55 15 0 1 55 1 55 8.72e-16 76.6
MS.gene003076.t1 MTR_4g024890 24.012 329 206 12 7 315 11 315 8.97e-16 78.2
MS.gene003076.t1 MTR_3g083640 26.490 302 167 11 7 293 56 317 9.56e-16 78.6
MS.gene003076.t1 MTR_3g072470 25.948 343 189 16 9 314 22 336 9.91e-16 78.6
MS.gene003076.t1 MTR_3g464500 27.419 310 178 14 7 294 28 312 1.05e-15 78.2
MS.gene003076.t1 MTR_4g023130 25.806 310 152 11 7 310 10 247 1.20e-15 77.4
MS.gene003076.t1 MTR_2g043400 25.220 341 190 15 9 314 26 336 1.49e-15 77.8
MS.gene003076.t1 MTR_3g036430 24.739 287 165 10 7 293 21 256 1.65e-15 77.0
MS.gene003076.t1 MTR_3g058440 26.645 304 172 12 1 283 25 298 2.24e-15 76.3
MS.gene003076.t1 MTR_5g057020 26.667 285 157 10 7 280 47 290 2.48e-15 76.6
MS.gene003076.t1 MTR_5g043160 25.360 347 203 12 9 314 53 384 2.56e-15 77.4
MS.gene003076.t1 MTR_4g109270 24.407 295 188 11 7 293 9 276 2.65e-15 76.6
MS.gene003076.t1 MTR_6g021880 25.000 324 184 14 17 314 31 321 3.04e-15 76.6
MS.gene003076.t1 MTR_1g442850 26.471 340 187 15 9 318 8 314 3.59e-15 76.6
MS.gene003076.t1 MTR_2g078850 25.685 292 167 13 8 284 32 288 3.64e-15 76.3
MS.gene003076.t1 MTR_5g070130 25.836 329 185 13 8 310 13 308 4.72e-15 76.3
MS.gene003076.t1 MTR_0128s0010 24.351 308 201 10 9 301 24 314 5.12e-15 76.3
MS.gene003076.t1 MTR_4g094365 28.616 318 184 14 7 310 9 297 5.22e-15 75.9
MS.gene003076.t1 MTR_3g011650 26.210 248 120 8 8 235 81 285 5.50e-15 75.1
MS.gene003076.t1 MTR_4g033495 25.407 307 192 11 7 294 28 316 5.84e-15 76.3
MS.gene003076.t1 MTR_7g056003 26.627 338 188 17 9 314 18 327 6.15e-15 75.9
MS.gene003076.t1 MTR_0115s0020 27.273 330 182 17 7 302 11 316 6.75e-15 75.9
MS.gene003076.t1 MTR_7g017130 24.490 343 187 14 7 307 19 331 7.04e-15 75.9
MS.gene003076.t1 MTR_5g069760 25.301 332 203 11 1 314 1 305 7.21e-15 75.5
MS.gene003076.t1 MTR_4g013185 27.217 327 179 15 9 294 13 321 7.31e-15 75.9
MS.gene003076.t1 MTR_4g108820 25.000 320 163 14 7 316 43 295 7.32e-15 75.1
MS.gene003076.t1 MTR_7g017170 24.490 343 187 14 7 307 19 331 7.36e-15 75.9
MS.gene003076.t1 MTR_3g011060 25.916 382 226 18 7 367 29 374 8.56e-15 75.5
MS.gene003076.t1 MTR_4g129190 24.633 341 194 12 7 314 7 317 9.06e-15 75.5
MS.gene003076.t1 MTR_3g010450 25.347 288 165 11 10 290 1 245 1.28e-14 73.2
MS.gene003076.t1 MTR_3g013950 26.433 314 181 12 9 294 9 300 1.30e-14 75.1
MS.gene003076.t1 MTR_7g056390 26.377 345 186 16 9 314 21 336 1.33e-14 75.1
MS.gene003076.t1 MTR_5g022420 25.658 304 189 10 7 306 28 298 1.33e-14 74.7
MS.gene003076.t1 MTR_7g055977 25.948 343 199 13 7 324 8 320 1.36e-14 74.7
MS.gene003076.t1 MTR_4g107780 25.926 270 158 12 7 266 37 274 1.42e-14 75.1
MS.gene003076.t1 MTR_4g107820 25.926 270 158 12 7 266 37 274 1.43e-14 75.1
MS.gene003076.t1 MTR_4g107820 25.926 270 158 12 7 266 37 274 1.47e-14 74.7
MS.gene003076.t1 MTR_4g107780 25.926 270 158 12 7 266 37 274 1.47e-14 74.7
MS.gene003076.t1 MTR_7g077970 26.875 320 181 14 9 294 10 310 1.51e-14 74.7
MS.gene003076.t1 MTR_5g074850 24.364 275 167 11 14 260 43 304 1.56e-14 75.5
MS.gene003076.t1 MTR_4g030760 26.154 325 181 12 9 315 76 359 1.86e-14 74.7
MS.gene003076.t1 MTR_3g030330 27.243 301 163 14 7 293 21 279 2.02e-14 74.3
MS.gene003076.t1 MTR_5g096710 26.935 323 185 15 3 301 20 315 2.03e-14 74.3
MS.gene003076.t1 MTR_7g066030 26.586 331 207 13 7 314 22 339 2.24e-14 74.3
MS.gene003076.t1 MTR_7g060940 25.424 354 190 13 7 324 23 338 2.34e-14 74.3
MS.gene003076.t1 MTR_7g057270 27.049 366 216 16 5 338 25 371 2.41e-14 74.3
MS.gene003076.t1 MTR_3g036335 26.190 294 184 13 7 293 42 309 2.43e-14 73.9
MS.gene003076.t1 MTR_7g062100 25.392 319 171 12 7 294 25 307 2.53e-14 73.9
MS.gene003076.t1 MTR_7g078840 27.557 352 197 17 7 314 11 348 2.59e-14 74.3
MS.gene003076.t1 MTR_5g069930 24.478 335 207 11 1 314 1 310 2.78e-14 73.9
MS.gene003076.t1 MTR_5g097220 24.390 287 162 9 14 260 21 292 2.85e-14 73.9
MS.gene003076.t1 MTR_1g029650 25.228 329 201 14 9 314 11 317 2.85e-14 73.9
MS.gene003076.t1 MTR_7g061090 24.921 317 189 11 7 294 23 319 3.01e-14 73.9
MS.gene003076.t1 MTR_3g437520 25.706 354 187 15 9 314 26 351 3.05e-14 73.9
MS.gene003076.t1 MTR_8g054320 26.126 222 121 7 124 338 76 261 3.17e-14 72.8
MS.gene003076.t1 MTR_2g065860 24.080 299 197 8 7 288 13 298 3.60e-14 73.6
MS.gene003076.t1 MTR_0134s0060 22.977 383 207 17 14 325 20 385 4.37e-14 73.6
MS.gene003076.t1 MTR_8g073550 25.792 221 115 7 7 208 31 221 4.49e-14 71.2
MS.gene003076.t1 MTR_7g061050 25.000 328 201 14 7 314 14 316 5.24e-14 73.2
MS.gene003076.t1 MTR_7g056260 25.076 331 190 14 9 311 17 317 5.25e-14 72.4
MS.gene003076.t1 MTR_7g055870 24.926 337 192 13 9 301 16 335 6.83e-14 72.8
MS.gene003076.t1 MTR_3g009250 26.639 244 117 8 8 232 43 243 7.81e-14 70.9
MS.gene003076.t1 MTR_7g066000 25.836 329 206 14 7 314 26 337 7.93e-14 72.8
MS.gene003076.t1 MTR_3g010430 26.603 312 161 12 7 293 37 305 8.47e-14 72.4
MS.gene003076.t1 MTR_6g060650 27.213 305 204 9 7 306 9 300 8.58e-14 72.4
MS.gene003076.t1 MTR_7g017040 26.101 318 169 16 7 285 17 307 8.67e-14 72.4
MS.gene003076.t1 MTR_5g057643 29.577 213 119 8 7 212 47 235 8.73e-14 71.2
MS.gene003076.t1 MTR_3g024110 24.151 265 153 10 7 260 102 329 8.87e-14 72.8
MS.gene003076.t1 MTR_0128s0020 24.012 329 206 10 7 314 19 324 9.87e-14 72.4
MS.gene003076.t1 MTR_2g066200 25.902 305 183 12 7 288 13 297 9.97e-14 72.4
MS.gene003076.t1 MTR_7g117720 31.707 205 97 8 7 206 11 177 1.04e-13 70.9
MS.gene003076.t1 MTR_2g065840 24.828 290 191 8 14 288 20 297 1.05e-13 72.0
MS.gene003076.t1 MTR_8g066440 23.636 330 219 11 7 314 24 342 1.24e-13 72.0
MS.gene003076.t1 MTR_7g066840 23.989 371 203 16 7 338 24 354 1.49e-13 71.6
MS.gene003076.t1 MTR_0267s0050 25.153 326 168 13 9 294 9 298 1.68e-13 71.6
MS.gene003076.t1 MTR_5g056020 24.781 343 214 12 7 315 18 350 1.70e-13 72.0
MS.gene003076.t1 MTR_5g096630 24.759 311 187 13 7 285 19 314 2.07e-13 71.2
MS.gene003076.t1 MTR_2g047832 24.771 327 195 12 7 307 30 331 2.30e-13 71.2
MS.gene003076.t1 MTR_5g070088 26.578 301 171 12 7 281 8 284 2.31e-13 71.2
MS.gene003076.t1 MTR_0649s0020 25.949 316 179 11 7 294 12 300 2.75e-13 70.9
MS.gene003076.t1 MTR_5g057040 28.636 220 126 7 7 219 47 242 3.49e-13 71.6
MS.gene003076.t1 MTR_0129s0070 24.727 275 156 12 14 260 25 276 4.16e-13 70.5
MS.gene003076.t1 MTR_5g092850 24.000 275 168 9 14 260 24 285 4.30e-13 70.5
MS.gene003076.t1 MTR_3g010520 24.832 298 163 14 7 293 26 273 4.35e-13 70.1
MS.gene003076.t1 MTR_2g461450 25.347 288 182 10 9 293 21 278 5.79e-13 69.7
MS.gene003076.t1 MTR_7g055930 25.672 335 192 14 9 301 16 335 6.11e-13 70.1
MS.gene003076.t1 MTR_1g007450 25.704 284 171 11 7 265 13 281 6.63e-13 69.7
MS.gene003076.t1 MTR_4g117750 27.950 322 182 13 7 310 4 293 7.63e-13 70.1
MS.gene003076.t1 MTR_7g078040 26.243 362 188 15 5 314 8 342 8.28e-13 69.7
MS.gene003076.t1 MTR_4g109280 27.244 312 189 12 7 310 9 290 8.69e-13 69.3
MS.gene003076.t1 MTR_7g056710 25.526 333 196 13 7 318 19 320 8.77e-13 69.3
MS.gene003076.t1 MTR_8g062660 24.671 304 184 12 7 293 23 298 8.98e-13 70.1
MS.gene003076.t1 MTR_3g009300 25.085 295 153 13 8 293 36 271 9.40e-13 68.9
MS.gene003076.t1 MTR_8g012090 24.000 300 157 9 14 288 24 277 9.87e-13 68.9
MS.gene003076.t1 MTR_4g121580 27.126 247 128 7 7 230 12 229 1.00e-12 69.3
MS.gene003076.t1 MTR_7g445750 25.316 316 207 10 7 301 24 331 1.14e-12 68.6
MS.gene003076.t1 MTR_5g097330 25.574 305 177 14 14 285 24 311 1.16e-12 68.9
MS.gene003076.t1 MTR_4g116330 27.542 236 132 9 7 232 24 230 1.17e-12 68.6
MS.gene003076.t1 MTR_2g055970 23.667 300 184 12 7 293 212 479 1.20e-12 69.3
MS.gene003076.t1 MTR_8g467140 25.342 292 172 12 7 285 33 291 1.22e-12 68.6
MS.gene003076.t1 MTR_5g094350 24.815 270 171 10 14 265 21 276 1.28e-12 67.8
MS.gene003076.t1 MTR_6g092560 25.397 315 187 14 5 294 11 302 1.32e-12 68.9
MS.gene003076.t1 MTR_8g046310 25.606 289 178 10 14 288 24 289 1.34e-12 68.9
MS.gene003076.t1 MTR_5g009060 25.272 368 210 16 7 340 26 362 1.35e-12 68.9
MS.gene003076.t1 MTR_6g079770 23.360 381 208 16 14 325 25 390 1.60e-12 68.6
MS.gene003076.t1 MTR_8g039500 22.973 296 188 10 7 286 13 284 1.67e-12 68.2
MS.gene003076.t1 MTR_7g056570 26.023 342 184 14 7 318 19 321 1.75e-12 68.6
MS.gene003076.t1 MTR_2g437190 45.370 108 39 6 42 146 47 137 1.79e-12 65.5
MS.gene003076.t1 MTR_1g055375 23.453 307 195 11 8 300 6 286 2.02e-12 68.2
MS.gene003076.t1 MTR_4g023150 24.595 309 179 14 19 311 23 293 3.48e-12 67.4
MS.gene003076.t1 MTR_5g037680 23.467 375 201 20 9 324 11 358 3.81e-12 67.8
MS.gene003076.t1 MTR_3g010590 24.912 285 162 12 7 281 40 282 4.23e-12 67.4
MS.gene003076.t1 MTR_1g112930 24.768 323 195 16 7 317 26 312 4.83e-12 67.0
MS.gene003076.t1 MTR_7g077910 24.046 262 154 12 70 314 19 252 8.74e-12 65.9
MS.gene003076.t1 MTR_3g010870 24.803 254 152 11 7 252 38 260 9.15e-12 65.9
MS.gene003076.t1 MTR_7g078860 23.768 345 196 14 7 314 10 324 1.02e-11 66.2
MS.gene003076.t1 MTR_5g075370 24.101 278 167 12 14 260 16 280 1.08e-11 66.6
MS.gene003076.t1 MTR_4g117770 26.423 246 150 10 9 250 14 232 1.10e-11 65.9
MS.gene003076.t1 MTR_4g117810 26.423 246 150 10 9 250 14 232 1.10e-11 65.9
MS.gene003076.t1 MTR_8g063370 24.221 289 172 11 14 281 32 294 1.13e-11 65.9
MS.gene003076.t1 MTR_4g117780 25.403 248 154 10 7 250 12 232 1.29e-11 65.9
MS.gene003076.t1 MTR_8g467670 25.338 296 174 13 7 281 15 284 1.69e-11 65.5
MS.gene003076.t1 MTR_3g024150 26.578 301 168 18 8 293 37 299 1.82e-11 65.5
MS.gene003076.t1 MTR_4g028750 24.272 309 192 14 7 288 17 310 1.83e-11 65.5
MS.gene003076.t1 MTR_0831s0010 25.806 279 162 11 2 260 46 299 2.46e-11 65.1
MS.gene003076.t1 MTR_3g010870 25.000 284 170 13 7 281 38 287 2.52e-11 65.1
MS.gene003076.t1 MTR_5g024260 24.444 270 179 9 14 272 30 285 2.58e-11 65.1
MS.gene003076.t1 MTR_3g010970 26.280 293 170 13 8 293 50 303 3.45e-11 64.7
MS.gene003076.t1 MTR_6g027910 23.051 295 187 13 8 281 11 286 3.51e-11 64.3
MS.gene003076.t1 MTR_7g009265 24.528 212 130 10 98 294 31 227 3.87e-11 63.9
MS.gene003076.t1 MTR_7g091640 24.096 332 208 12 7 314 36 347 4.04e-11 64.3
MS.gene003076.t1 MTR_0128s0070 24.359 312 184 15 7 294 23 306 4.33e-11 64.3
MS.gene003076.t1 MTR_5g097210 25.079 315 190 13 7 307 10 292 4.44e-11 63.9
MS.gene003076.t1 MTR_8g033090 25.839 298 149 10 7 260 15 284 4.95e-11 63.9
MS.gene003076.t1 MTR_1g023400 26.360 239 146 10 8 240 5 219 4.96e-11 63.9
MS.gene003076.t1 MTR_8g433040 25.424 295 178 11 7 293 19 279 5.20e-11 63.9
MS.gene003076.t1 MTR_8g032380 25.424 295 178 11 7 293 19 279 5.20e-11 63.9
MS.gene003076.t1 MTR_3g023930 24.521 261 157 10 7 265 35 257 5.90e-11 63.5
MS.gene003076.t1 MTR_6g017270 25.000 228 136 8 4 215 2 210 6.77e-11 63.2
MS.gene003076.t1 MTR_5g007610 25.000 280 153 10 7 260 42 290 7.19e-11 63.5
MS.gene003076.t1 MTR_5g048160 25.168 298 162 15 7 268 5 277 8.98e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003076.t1 AT4G12560 30.147 408 214 11 7 365 5 390 7.72e-47 164
MS.gene003076.t1 AT4G12560 30.147 408 214 11 7 365 5 390 7.72e-47 164
MS.gene003076.t1 AT4G12560 30.147 408 214 11 7 365 5 390 7.72e-47 164
MS.gene003076.t1 AT4G22390 26.648 364 198 13 7 325 5 344 3.29e-27 111
MS.gene003076.t1 AT4G22390 26.648 364 198 13 7 325 5 344 4.31e-27 111
MS.gene003076.t1 AT4G04690 27.132 258 149 12 7 260 12 234 1.41e-16 80.9
MS.gene003076.t1 AT3G16210 25.517 290 169 11 7 292 6 252 1.92e-14 74.3
MS.gene003076.t1 AT3G17620 26.740 273 154 13 1 255 1 245 2.53e-14 74.3
MS.gene003076.t1 AT3G17710 25.962 312 171 17 1 293 1 271 1.68e-12 68.6
MS.gene003076.t1 AT3G23880 23.762 303 182 11 7 293 15 284 3.24e-12 67.4
MS.gene003076.t1 AT1G47390 24.000 300 174 13 7 293 8 266 2.68e-11 64.7
MS.gene003076.t1 AT2G17830 25.614 285 162 14 7 271 8 262 4.90e-11 63.9

Find 81 sgRNAs with CRISPR-Local

Find 114 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTATGCGTTCACGGTTT+CGG 0.251438 2.2:+60829425 MS.gene003076:CDS
TGAAATAGATGTTGATGTTT+TGG 0.273598 2.2:+60829760 MS.gene003076:CDS
AAACTACTAAAATTGATGTT+TGG 0.296634 2.2:+60829813 MS.gene003076:CDS
TTGTCAGATTCAAGAATGTT+AGG 0.306611 2.2:-60829389 None:intergenic
ATACGATGTTTACGGGTGTT+AGG 0.327769 2.2:-60829341 None:intergenic
GGAAATCCTCTCCCGCTTAC+CGG 0.329126 2.2:+60828992 MS.gene003076:CDS
AACTACTAAAATTGATGTTT+GGG 0.329487 2.2:+60829814 MS.gene003076:CDS
TCTGACATGTGATTCAAAAT+AGG 0.330949 2.2:-60829516 None:intergenic
GAAGTTGTGGGAATCGATTA+TGG 0.340616 2.2:-60829060 None:intergenic
GTGATTTCGTTGGCGCCGTT+GGG 0.340658 2.2:-60829308 None:intergenic
GATAGCAATGAGGCCGTTAC+AGG 0.341378 2.2:-60829258 None:intergenic
TGTGATTTCGTTGGCGCCGT+TGG 0.347965 2.2:-60829309 None:intergenic
AACAGAACCATGACTCTTAT+CGG 0.356601 2.2:+60829233 MS.gene003076:CDS
TTCTTCTTAGAATTATCAAT+AGG 0.368242 2.2:-60830088 None:intergenic
GTTGAGTGGAATCATAGATT+TGG 0.379047 2.2:-60829174 None:intergenic
TGGGGTGATTAAAAGCGATT+TGG 0.380155 2.2:-60829289 None:intergenic
AAGGGAGAATACGATGTTTA+CGG 0.381620 2.2:-60829349 None:intergenic
AAGAGCGTACGGCATACAAC+TGG 0.383572 2.2:-60829576 None:intergenic
CGATTCTCCTTATGCGTTCA+CGG 0.394113 2.2:+60829419 MS.gene003076:CDS
ACCGAAACCGTGAACGCATA+AGG 0.407144 2.2:-60829426 None:intergenic
TACGATGTTTACGGGTGTTA+GGG 0.426624 2.2:-60829340 None:intergenic
ATGGTTCTGTTGCGCGTGAC+AGG 0.428466 2.2:-60829221 None:intergenic
ATCATAGCATCATCGAAATC+AGG 0.433982 2.2:-60830034 None:intergenic
TCTTCTTAGAATTATCAATA+GGG 0.434872 2.2:-60830087 None:intergenic
TTGTTGAGAATTCTCTTCAC+TGG 0.446412 2.2:+60829624 MS.gene003076:CDS
GCACAAGTTAGTTATGTTGA+AGG 0.450093 2.2:+60830007 MS.gene003076:CDS
AGGGAGAATACGATGTTTAC+GGG 0.451936 2.2:-60829348 None:intergenic
CTTATCTATTGTCACGCCAT+GGG 0.457803 2.2:+60829596 MS.gene003076:CDS
ATCATAGATTTGGTTAGATT+AGG 0.461394 2.2:-60829164 None:intergenic
GGGATAGAAAGAGGTAGGAA+AGG 0.472081 2.2:-60829368 None:intergenic
GAAGGATGAGGTTGAAATTG+AGG 0.475118 2.2:-60829109 None:intergenic
GGATAGAAAGAGGTAGGAAA+GGG 0.475330 2.2:-60829367 None:intergenic
TGGATAATGACAACGAAACT+TGG 0.476597 2.2:+60829644 MS.gene003076:CDS
CCATCACTCGAATAACCTAC+AGG 0.483884 2.2:-60829926 None:intergenic
AAGGATGAGGTTGAAATTGA+GGG 0.493306 2.2:-60829108 None:intergenic
GGCGAGTGATGTTCCTCCGC+TGG 0.504345 2.2:+60828959 MS.gene003076:CDS
TCTTATCTATTGTCACGCCA+TGG 0.509372 2.2:+60829595 MS.gene003076:CDS
TCCTCCGCTGGAATTGTTCG+AGG 0.509501 2.2:+60828971 MS.gene003076:CDS
TGTTAGGGATAGAAAGAGGT+AGG 0.510801 2.2:-60829373 None:intergenic
GCGCCAACGAAATCACAATC+TGG 0.511100 2.2:+60829315 MS.gene003076:CDS
TGTCAGATTCAAGAATGTTA+GGG 0.511226 2.2:-60829388 None:intergenic
ACTCTTATCGGTTCCTGTAA+CGG 0.526077 2.2:+60829245 MS.gene003076:CDS
CGGTATTGAGCTGAAGGATG+AGG 0.533230 2.2:-60829121 None:intergenic
TCTGAGGAGTTTGTAATCAC+CGG 0.534424 2.2:-60829462 None:intergenic
ACAAACTCCTCAGAATCGCT+TGG 0.534710 2.2:+60829471 MS.gene003076:CDS
GTTCCAGATTGTGATTTCGT+TGG 0.535255 2.2:-60829318 None:intergenic
GGCCTCATTGCTATCTCTAT+CGG 0.535993 2.2:+60829266 MS.gene003076:CDS
GGAGCAATGTTGGCGCTGAA+AGG 0.537072 2.2:-60829200 None:intergenic
TTATCTATTGTCACGCCATG+GGG 0.537441 2.2:+60829597 MS.gene003076:CDS
TTAAATGCAACAATTAAAGA+AGG 0.541485 2.2:-60829677 None:intergenic
GATGATGCTATGATTTGTGT+TGG 0.550445 2.2:+60830043 MS.gene003076:CDS
CCTGTAGGTTATTCGAGTGA+TGG 0.553177 2.2:+60829926 MS.gene003076:CDS
ATAATGACAACGAAACTTGG+TGG 0.553703 2.2:+60829647 MS.gene003076:CDS
CTTAGAATTATCAATAGGGA+AGG 0.555296 2.2:-60830083 None:intergenic
TTGAAATCTTAGAAGCCTGT+AGG 0.561976 2.2:+60829911 MS.gene003076:intron
AGAGATCGGTATTGAGCTGA+AGG 0.568692 2.2:-60829127 None:intergenic
AGAATGTTAGGGATAGAAAG+AGG 0.570126 2.2:-60829377 None:intergenic
TATCAATAGGGAAGGAAGGT+GGG 0.570553 2.2:-60830075 None:intergenic
CAATGTTGGCGCTGAAAGGA+TGG 0.574273 2.2:-60829196 None:intergenic
CGGCTAACCAAGCGATTCTG+AGG 0.575051 2.2:-60829478 None:intergenic
GCGCGTGACAGGAGCAATGT+TGG 0.578120 2.2:-60829210 None:intergenic
GGAGGAACATCACTCGCCAT+TGG 0.578934 2.2:-60828954 None:intergenic
AGTTTGTAATCACCGGATGA+AGG 0.579417 2.2:-60829455 None:intergenic
TGATTTCGTTGGCGCCGTTG+GGG 0.586519 2.2:-60829307 None:intergenic
TCCTCGAACAATTCCAGCGG+AGG 0.587191 2.2:-60828972 None:intergenic
TTAGATTAGGAAGATCGAGT+TGG 0.588168 2.2:-60829151 None:intergenic
TTATCAATAGGGAAGGAAGG+TGG 0.588817 2.2:-60830076 None:intergenic
GGTGAAGGTTAGTGAAGTTG+TGG 0.596134 2.2:-60829073 None:intergenic
TCAGCATGAAAACAAACTCG+TGG 0.600644 2.2:+60829543 MS.gene003076:CDS
GAATTATCAATAGGGAAGGA+AGG 0.606778 2.2:-60830079 None:intergenic
AAGATCGAGTTGGTAGAGAT+CGG 0.610588 2.2:-60829141 None:intergenic
GTGAAGGTTAGTGAAGTTGT+GGG 0.621733 2.2:-60829072 None:intergenic
TGACAATAGATAAGAGCGTA+CGG 0.624633 2.2:-60829587 None:intergenic
AGAGCGTACGGCATACAACT+GGG 0.636252 2.2:-60829575 None:intergenic
ACAGGAACCGATAAGAGTCA+TGG 0.646651 2.2:-60829240 None:intergenic
GCGCTGAAAGGATGGTTGAG+TGG 0.662587 2.2:-60829188 None:intergenic
ATTTCCTCGAACAATTCCAG+CGG 0.688193 2.2:-60828975 None:intergenic
GAACGCATAAGGAGAATCGA+CGG 0.691905 2.2:-60829415 None:intergenic
GTACAAGCAAGAGCATGAGA+AGG 0.694973 2.2:+60830119 MS.gene003076:CDS
TATCTATTGTCACGCCATGG+GGG 0.695991 2.2:+60829598 MS.gene003076:CDS
GGCCGATAGAGATAGCAATG+AGG 0.753065 2.2:-60829268 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAAATTGAATTCTTATTAT+CGG + chr2.2:60830246-60830265 MS.gene003076:intron 15.0%
!! AAACTACTAAAATTGATGTT+TGG + chr2.2:60829813-60829832 MS.gene003076:CDS 20.0%
!! AACTACTAAAATTGATGTTT+GGG + chr2.2:60829814-60829833 MS.gene003076:CDS 20.0%
!! AACTTCATATATCATATGAT+GGG - chr2.2:60830209-60830228 None:intergenic 20.0%
!! TAACTTCATATATCATATGA+TGG - chr2.2:60830210-60830229 None:intergenic 20.0%
!! TCTTCTTAGAATTATCAATA+GGG - chr2.2:60830090-60830109 None:intergenic 20.0%
!! TTAAATGCAACAATTAAAGA+AGG - chr2.2:60829680-60829699 None:intergenic 20.0%
!! TTCTTCTTAGAATTATCAAT+AGG - chr2.2:60830091-60830110 None:intergenic 20.0%
!! AACACTTGAAATTTTCAATG+TGG + chr2.2:60829703-60829722 MS.gene003076:CDS 25.0%
!! ATCATAGATTTGGTTAGATT+AGG - chr2.2:60829167-60829186 None:intergenic 25.0%
!! GAAATAGATGTTGATGTTTT+GGG + chr2.2:60829761-60829780 MS.gene003076:CDS 25.0%
!! TATGGATTTAAGTGATTTTG+AGG - chr2.2:60829045-60829064 None:intergenic 25.0%
!! TGAAATAGATGTTGATGTTT+TGG + chr2.2:60829760-60829779 MS.gene003076:CDS 25.0%
!! TTGGTGTAAACTTTTTACTT+TGG + chr2.2:60829865-60829884 MS.gene003076:intron 25.0%
!!! AATTGAGGGAATTATTTTTG+AGG - chr2.2:60829097-60829116 None:intergenic 25.0%
!!! ATAAGTTGATGTCAATTCAA+TGG + chr2.2:60830182-60830201 MS.gene003076:intron 25.0%
CTTAGAATTATCAATAGGGA+AGG - chr2.2:60830086-60830105 None:intergenic 30.0%
GAAGTTAAACTCTATGCTAA+AGG + chr2.2:60830223-60830242 MS.gene003076:intron 30.0%
TCTGACATGTGATTCAAAAT+AGG - chr2.2:60829519-60829538 None:intergenic 30.0%
TGTCAGATTCAAGAATGTTA+GGG - chr2.2:60829391-60829410 None:intergenic 30.0%
TTGAATTCTTATTATCGGAC+AGG + chr2.2:60830251-60830270 MS.gene003076:intron 30.0%
TTGTCAGATTCAAGAATGTT+AGG - chr2.2:60829392-60829411 None:intergenic 30.0%
! TCAAAATAGGATTTTTCACG+TGG - chr2.2:60829506-60829525 None:intergenic 30.0%
! TTATTCGAGTGATGGAAAAA+AGG + chr2.2:60829934-60829953 MS.gene003076:CDS 30.0%
!! AATATGGTTCTAGAGATAGT+TGG + chr2.2:60829846-60829865 MS.gene003076:intron 30.0%
!! CTCTCATTGCTATTATTTTC+AGG - chr2.2:60829737-60829756 None:intergenic 30.0%
!! TAGATTTTGAGAAGCTGTTT+TGG + chr2.2:60829969-60829988 MS.gene003076:CDS 30.0%
!! TTGCTATTATTTTCAGGAAG+AGG - chr2.2:60829731-60829750 None:intergenic 30.0%
!!! ATGGAAAAAAGGTTTTGTTG+AGG + chr2.2:60829945-60829964 MS.gene003076:CDS 30.0%
!!! TAAGTGATTTTGAGGTTGAT+CGG - chr2.2:60829037-60829056 None:intergenic 30.0%
!!! TGGAAAAAAGGTTTTGTTGA+GGG + chr2.2:60829946-60829965 MS.gene003076:CDS 30.0%
AACAGAACCATGACTCTTAT+CGG + chr2.2:60829233-60829252 MS.gene003076:CDS 35.0%
AAGGATGAGGTTGAAATTGA+GGG - chr2.2:60829111-60829130 None:intergenic 35.0%
AAGGGAGAATACGATGTTTA+CGG - chr2.2:60829352-60829371 None:intergenic 35.0%
AGAATGTTAGGGATAGAAAG+AGG - chr2.2:60829380-60829399 None:intergenic 35.0%
ATAATGACAACGAAACTTGG+TGG + chr2.2:60829647-60829666 MS.gene003076:CDS 35.0%
ATCATAGCATCATCGAAATC+AGG - chr2.2:60830037-60830056 None:intergenic 35.0%
GAATTATCAATAGGGAAGGA+AGG - chr2.2:60830082-60830101 None:intergenic 35.0%
GCACAAGTTAGTTATGTTGA+AGG + chr2.2:60830007-60830026 MS.gene003076:CDS 35.0%
GTTGAGTGGAATCATAGATT+TGG - chr2.2:60829177-60829196 None:intergenic 35.0%
GTTTGGGTGATGAAAGAATA+TGG + chr2.2:60829830-60829849 MS.gene003076:intron 35.0%
TGGATAATGACAACGAAACT+TGG + chr2.2:60829644-60829663 MS.gene003076:CDS 35.0%
TTAGATTAGGAAGATCGAGT+TGG - chr2.2:60829154-60829173 None:intergenic 35.0%
TTGAAATCTTAGAAGCCTGT+AGG + chr2.2:60829911-60829930 MS.gene003076:intron 35.0%
TTGTTGAGAATTCTCTTCAC+TGG + chr2.2:60829624-60829643 MS.gene003076:CDS 35.0%
! AATCGGAGAAGTGATTTTAC+CGG - chr2.2:60829014-60829033 None:intergenic 35.0%
! ATAGGATTTTTCACGTGGAT+CGG - chr2.2:60829501-60829520 None:intergenic 35.0%
! GATGATGCTATGATTTGTGT+TGG + chr2.2:60830043-60830062 MS.gene003076:CDS 35.0%
! TGACAATAGATAAGAGCGTA+CGG - chr2.2:60829590-60829609 None:intergenic 35.0%
!! ACAGGCTTCTAAGATTTCAA+AGG - chr2.2:60829911-60829930 None:intergenic 35.0%
!! ATAGATGTTGATGTTTTGGG+AGG + chr2.2:60829764-60829783 MS.gene003076:CDS 35.0%
!!! ATTTTGAGGTTGATCGGAAT+CGG - chr2.2:60829031-60829050 None:intergenic 35.0%
!!! GGGAATTATTTTTGAGGTGA+AGG - chr2.2:60829091-60829110 None:intergenic 35.0%
!!! TAGATGTTGATGTTTTGGGA+GGG + chr2.2:60829765-60829784 MS.gene003076:CDS 35.0%
AGGGAGAATACGATGTTTAC+GGG - chr2.2:60829351-60829370 None:intergenic 40.0%
AGTTTGTAATCACCGGATGA+AGG - chr2.2:60829458-60829477 None:intergenic 40.0%
ATACGATGTTTACGGGTGTT+AGG - chr2.2:60829344-60829363 None:intergenic 40.0%
ATTCTCAACAAAAACCCCCA+TGG - chr2.2:60829615-60829634 None:intergenic 40.0%
ATTTCCTCGAACAATTCCAG+CGG - chr2.2:60828978-60828997 None:intergenic 40.0%
CTTATCTATTGTCACGCCAT+GGG + chr2.2:60829596-60829615 MS.gene003076:CDS 40.0%
GAAGGATGAGGTTGAAATTG+AGG - chr2.2:60829112-60829131 None:intergenic 40.0%
GAAGTTGTGGGAATCGATTA+TGG - chr2.2:60829063-60829082 None:intergenic 40.0%
GGATAGAAAGAGGTAGGAAA+GGG - chr2.2:60829370-60829389 None:intergenic 40.0%
GTGAAGGTTAGTGAAGTTGT+GGG - chr2.2:60829075-60829094 None:intergenic 40.0%
GTTCCAGATTGTGATTTCGT+TGG - chr2.2:60829321-60829340 None:intergenic 40.0%
TACGATGTTTACGGGTGTTA+GGG - chr2.2:60829343-60829362 None:intergenic 40.0%
TATCAATAGGGAAGGAAGGT+GGG - chr2.2:60830078-60830097 None:intergenic 40.0%
TCAGCATGAAAACAAACTCG+TGG + chr2.2:60829543-60829562 MS.gene003076:CDS 40.0%
TCTGAGGAGTTTGTAATCAC+CGG - chr2.2:60829465-60829484 None:intergenic 40.0%
TCTTATCTATTGTCACGCCA+TGG + chr2.2:60829595-60829614 MS.gene003076:CDS 40.0%
TGGGGTGATTAAAAGCGATT+TGG - chr2.2:60829292-60829311 None:intergenic 40.0%
TGTTAGGGATAGAAAGAGGT+AGG - chr2.2:60829376-60829395 None:intergenic 40.0%
TTATCAATAGGGAAGGAAGG+TGG - chr2.2:60830079-60830098 None:intergenic 40.0%
TTATCTATTGTCACGCCATG+GGG + chr2.2:60829597-60829616 MS.gene003076:CDS 40.0%
! AAGTGATTTTACCGGTAAGC+GGG - chr2.2:60829006-60829025 None:intergenic 40.0%
! GAAGTGATTTTACCGGTAAG+CGG - chr2.2:60829007-60829026 None:intergenic 40.0%
!! AAGATCGAGTTGGTAGAGAT+CGG - chr2.2:60829144-60829163 None:intergenic 40.0%
!! ACTCTTATCGGTTCCTGTAA+CGG + chr2.2:60829245-60829264 MS.gene003076:CDS 40.0%
!! ATCGCTTTTAATCACCCCAA+CGG + chr2.2:60829293-60829312 MS.gene003076:CDS 40.0%
!! TTCGGTTTTGATCCTTCATC+CGG + chr2.2:60829443-60829462 MS.gene003076:CDS 40.0%
ACAAACTCCTCAGAATCGCT+TGG + chr2.2:60829471-60829490 MS.gene003076:CDS 45.0%
ACAGGAACCGATAAGAGTCA+TGG - chr2.2:60829243-60829262 None:intergenic 45.0%
CCATCACTCGAATAACCTAC+AGG - chr2.2:60829929-60829948 None:intergenic 45.0%
CCTGTAGGTTATTCGAGTGA+TGG + chr2.2:60829926-60829945 MS.gene003076:CDS 45.0%
CGATTCTCCTTATGCGTTCA+CGG + chr2.2:60829419-60829438 MS.gene003076:CDS 45.0%
GAACGCATAAGGAGAATCGA+CGG - chr2.2:60829418-60829437 None:intergenic 45.0%
GGCCTCATTGCTATCTCTAT+CGG + chr2.2:60829266-60829285 MS.gene003076:CDS 45.0%
GGGATAGAAAGAGGTAGGAA+AGG - chr2.2:60829371-60829390 None:intergenic 45.0%
GGTGAAGGTTAGTGAAGTTG+TGG - chr2.2:60829076-60829095 None:intergenic 45.0%
TATCTATTGTCACGCCATGG+GGG + chr2.2:60829598-60829617 MS.gene003076:CDS 45.0%
TCCTTATGCGTTCACGGTTT+CGG + chr2.2:60829425-60829444 MS.gene003076:CDS 45.0%
! AGAGATCGGTATTGAGCTGA+AGG - chr2.2:60829130-60829149 None:intergenic 45.0%
! GTACAAGCAAGAGCATGAGA+AGG + chr2.2:60830119-60830138 MS.gene003076:CDS 45.0%
ACCGAAACCGTGAACGCATA+AGG - chr2.2:60829429-60829448 None:intergenic 50.0%
AGAGCGTACGGCATACAACT+GGG - chr2.2:60829578-60829597 None:intergenic 50.0%
GATAGCAATGAGGCCGTTAC+AGG - chr2.2:60829261-60829280 None:intergenic 50.0%
GCGCCAACGAAATCACAATC+TGG + chr2.2:60829315-60829334 MS.gene003076:CDS 50.0%
GGCCGATAGAGATAGCAATG+AGG - chr2.2:60829271-60829290 None:intergenic 50.0%
! AAGAGCGTACGGCATACAAC+TGG - chr2.2:60829579-60829598 None:intergenic 50.0%
! ATTTTACCGGTAAGCGGGAG+AGG - chr2.2:60829001-60829020 None:intergenic 50.0%
! CAATGTTGGCGCTGAAAGGA+TGG - chr2.2:60829199-60829218 None:intergenic 50.0%
! CGGTATTGAGCTGAAGGATG+AGG - chr2.2:60829124-60829143 None:intergenic 50.0%
CGGCTAACCAAGCGATTCTG+AGG - chr2.2:60829481-60829500 None:intergenic 55.0%
GCGCTGAAAGGATGGTTGAG+TGG - chr2.2:60829191-60829210 None:intergenic 55.0%
GGAAATCCTCTCCCGCTTAC+CGG + chr2.2:60828992-60829011 MS.gene003076:CDS 55.0%
GTGATTTCGTTGGCGCCGTT+GGG - chr2.2:60829311-60829330 None:intergenic 55.0%
TCCTCCGCTGGAATTGTTCG+AGG + chr2.2:60828971-60828990 MS.gene003076:CDS 55.0%
TCCTCGAACAATTCCAGCGG+AGG - chr2.2:60828975-60828994 None:intergenic 55.0%
TGATTTCGTTGGCGCCGTTG+GGG - chr2.2:60829310-60829329 None:intergenic 55.0%
TGTGATTTCGTTGGCGCCGT+TGG - chr2.2:60829312-60829331 None:intergenic 55.0%
! ATGGTTCTGTTGCGCGTGAC+AGG - chr2.2:60829224-60829243 None:intergenic 55.0%
! GGAGCAATGTTGGCGCTGAA+AGG - chr2.2:60829203-60829222 None:intergenic 55.0%
GCGCGTGACAGGAGCAATGT+TGG - chr2.2:60829213-60829232 None:intergenic 60.0%
GGCGAGTGATGTTCCTCCGC+TGG + chr2.2:60828959-60828978 MS.gene003076:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 60828957 60830282 60828957 ID=MS.gene003076
chr2.2 mRNA 60828957 60830282 60828957 ID=MS.gene003076.t1;Parent=MS.gene003076
chr2.2 exon 60828957 60829835 60828957 ID=MS.gene003076.t1.exon1;Parent=MS.gene003076.t1
chr2.2 CDS 60828957 60829835 60828957 ID=cds.MS.gene003076.t1;Parent=MS.gene003076.t1
chr2.2 exon 60829923 60830140 60829923 ID=MS.gene003076.t1.exon2;Parent=MS.gene003076.t1
chr2.2 CDS 60829923 60830140 60829923 ID=cds.MS.gene003076.t1;Parent=MS.gene003076.t1
chr2.2 exon 60830273 60830282 60830273 ID=MS.gene003076.t1.exon3;Parent=MS.gene003076.t1
chr2.2 CDS 60830273 60830282 60830273 ID=cds.MS.gene003076.t1;Parent=MS.gene003076.t1
Gene Sequence

>MS.gene003076

ATGGCGAGTGATGTTCCTCCGCTGGAATTGTTCGAGGAAATCCTCTCCCGCTTACCGGTAAAATCACTTCTCCGATTCCGATCAACCTCAAAATCACTTAAATCCATAATCGATTCCCACAACTTCACTAACCTTCACCTCAAAAATAATTCCCTCAATTTCAACCTCATCCTTCAGCTCAATACCGATCTCTACCAACTCGATCTTCCTAATCTAACCAAATCTATGATTCCACTCAACCATCCTTTCAGCGCCAACATTGCTCCTGTCACGCGCAACAGAACCATGACTCTTATCGGTTCCTGTAACGGCCTCATTGCTATCTCTATCGGCCAAATCGCTTTTAATCACCCCAACGGCGCCAACGAAATCACAATCTGGAACCCTAACACCCGTAAACATCGTATTCTCCCTTTCCTACCTCTTTCTATCCCTAACATTCTTGAATCTGACAACATCCGTCGATTCTCCTTATGCGTTCACGGTTTCGGTTTTGATCCTTCATCCGGTGATTACAAACTCCTCAGAATCGCTTGGTTAGCCGATCCACGTGAAAAATCCTATTTTGAATCACATGTCAGACTCTTCAGCATGAAAACAAACTCGTGGAAAATAATTCCCAGTTGTATGCCGTACGCTCTTATCTATTGTCACGCCATGGGGGTTTTTGTTGAGAATTCTCTTCACTGGATAATGACAACGAAACTTGGTGGATTACATCCTTCTTTAATTGTTGCATTTAATCTAACACTTGAAATTTTCAATGTGGTTCCTCTTCCTGAAAATAATAGCAATGAGAGTTTTGAAATAGATGTTGATGTTTTGGGAGGGTGTCTTTGCATGACTTTGAATTACGAAACTACTAAAATTGATGTTTGGGTGATGAAAGAATATGGTTCTAGAGATAGTTGGTGTAAACTTTTTACTTTGGTTAAATCGTGTTTCGATTTACCTTTGAAATCTTAGAAGCCTGTAGGTTATTCGAGTGATGGAAAAAAGGTTTTGTTGAGGGTAGATTTTGAGAAGCTGTTTTGGTATGATTTGAAGAGTGCACAAGTTAGTTATGTTGAAGGAATTCCTGATTTCGATGATGCTATGATTTGTGTTGGAAGTCTTGTCCCACCTTCCTTCCCTATTGATAATTCTAAGAAGAAAGAGAATCGTACAAGCAAGAGCATGAGAAGGTACTTGTTTTGATAATATGAGTTTTGAGTTTTTGCTATGTATAAGTTGATGTCAATTCAATGGACCCATCATATGATATATGAAGTTAAACTCTATGCTAAAGGTCAAATTGAATTCTTATTATCGGACAGGATTCTCTAA

Protein sequence

>MS.gene003076.t1

MASDVPPLELFEEILSRLPVKSLLRFRSTSKSLKSIIDSHNFTNLHLKNNSLNFNLILQLNTDLYQLDLPNLTKSMIPLNHPFSANIAPVTRNRTMTLIGSCNGLIAISIGQIAFNHPNGANEITIWNPNTRKHRILPFLPLSIPNILESDNIRRFSLCVHGFGFDPSSGDYKLLRIAWLADPREKSYFESHVRLFSMKTNSWKIIPSCMPYALIYCHAMGVFVENSLHWIMTTKLGGLHPSLIVAFNLTLEIFNVVPLPENNSNESFEIDVDVLGGCLCMTLNYETTKIDVWKPVGYSSDGKKVLLRVDFEKLFWYDLKSAQVSYVEGIPDFDDAMICVGSLVPPSFPIDNSKKKENRTSKSMRRIL