AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene44428


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44428.t1 MTR_3g103020 56.489 393 123 10 5 367 4 378 8.73e-137 395
MS.gene44428.t1 MTR_4g117770 57.364 387 112 8 13 367 2 367 8.23e-135 389
MS.gene44428.t1 MTR_4g117810 57.364 387 112 8 13 367 2 367 8.23e-135 389
MS.gene44428.t1 MTR_4g117780 56.072 387 117 7 13 367 2 367 1.60e-133 386
MS.gene44428.t1 MTR_4g117850 55.051 396 119 12 1 360 1 373 2.03e-126 368
MS.gene44428.t1 MTR_4g109270 55.172 377 118 10 22 367 8 364 1.64e-121 355
MS.gene44428.t1 MTR_3g034180 52.239 402 138 12 2 366 104 488 1.24e-118 352
MS.gene44428.t1 MTR_3g034130 52.561 371 124 10 20 353 7 362 2.50e-114 337
MS.gene44428.t1 MTR_4g109280 52.895 380 129 10 16 367 2 359 3.41e-113 334
MS.gene44428.t1 MTR_4g094365 51.036 386 132 11 16 367 2 364 8.57e-111 328
MS.gene44428.t1 MTR_3g034160 50.895 391 135 11 15 366 2 374 1.03e-106 318
MS.gene44428.t1 MTR_4g023080 50.131 381 132 12 15 366 2 353 1.08e-106 317
MS.gene44428.t1 MTR_4g021785 49.468 376 137 8 19 367 6 355 2.60e-106 316
MS.gene44428.t1 MTR_4g023090 47.512 402 142 13 12 366 6 385 1.28e-105 315
MS.gene44428.t1 MTR_5g097210 50.653 383 131 16 14 363 2 359 2.98e-102 306
MS.gene44428.t1 MTR_6g060650 50.769 390 135 13 15 366 2 372 9.61e-101 303
MS.gene44428.t1 MTR_4g122850 50.136 369 134 10 33 367 12 364 7.49e-100 301
MS.gene44428.t1 MTR_5g070080 49.242 396 136 13 20 367 8 386 1.12e-99 300
MS.gene44428.t1 MTR_4g116330 47.859 397 157 11 3 367 2 380 4.07e-99 299
MS.gene44428.t1 MTR_1g055135 48.177 384 142 13 21 367 12 375 5.09e-99 298
MS.gene44428.t1 MTR_4g023440 49.157 356 148 9 13 367 9 332 7.83e-98 294
MS.gene44428.t1 MTR_4g023070 46.512 387 145 11 22 366 3 369 3.47e-97 293
MS.gene44428.t1 MTR_4g117720 47.013 385 114 12 19 367 48 378 1.96e-95 289
MS.gene44428.t1 MTR_8g433040 47.467 375 154 10 15 367 11 364 7.76e-95 287
MS.gene44428.t1 MTR_8g032380 47.467 375 154 10 15 367 11 364 7.76e-95 287
MS.gene44428.t1 MTR_4g116330 48.919 370 154 11 3 367 2 341 3.67e-94 285
MS.gene44428.t1 MTR_4g118380 48.533 375 124 12 15 339 2 357 3.94e-94 285
MS.gene44428.t1 MTR_4g023190 47.013 385 142 12 14 365 2 357 2.60e-93 283
MS.gene44428.t1 MTR_4g023120 45.220 387 152 9 22 367 3 370 3.49e-93 283
MS.gene44428.t1 MTR_5g070130 48.042 383 148 12 21 367 10 377 1.13e-92 283
MS.gene44428.t1 MTR_4g023380 45.499 411 132 12 12 367 6 379 4.25e-92 281
MS.gene44428.t1 MTR_4g023150 46.094 384 148 12 14 365 2 358 6.18e-88 270
MS.gene44428.t1 MTR_4g023200 45.580 362 138 11 36 365 24 358 1.97e-87 268
MS.gene44428.t1 MTR_4g023130 44.474 380 114 9 15 366 2 312 2.35e-87 266
MS.gene44428.t1 MTR_4g117750 46.272 389 136 13 20 366 1 358 5.10e-87 271
MS.gene44428.t1 MTR_4g117750 57.273 110 46 1 256 365 373 481 5.52e-34 131
MS.gene44428.t1 MTR_4g121580 47.945 365 143 14 13 357 2 339 1.19e-86 267
MS.gene44428.t1 MTR_8g032390 42.532 395 143 13 4 361 22 369 4.35e-83 258
MS.gene44428.t1 MTR_5g070088 44.125 383 163 8 21 361 6 379 1.76e-82 256
MS.gene44428.t1 MTR_8g013010 50.362 276 97 8 16 265 48 309 3.33e-81 251
MS.gene44428.t1 MTR_1g055165 45.609 353 143 11 21 367 9 318 3.18e-80 248
MS.gene44428.t1 MTR_4g117870 50.174 287 118 9 82 367 5 267 4.87e-78 241
MS.gene44428.t1 MTR_8g433030 40.458 393 121 14 4 361 22 336 3.84e-70 223
MS.gene44428.t1 MTR_8g040935 55.500 200 59 2 198 367 9 208 2.84e-63 201
MS.gene44428.t1 MTR_1g055195 44.224 303 107 12 102 367 201 478 2.64e-61 204
MS.gene44428.t1 MTR_2g048580 36.554 383 162 15 20 367 6 342 5.72e-57 189
MS.gene44428.t1 MTR_4g117530 48.214 224 94 6 149 367 47 253 1.52e-56 185
MS.gene44428.t1 MTR_4g118400 38.172 372 126 14 15 361 2 294 5.90e-56 185
MS.gene44428.t1 MTR_4g116340 46.512 258 98 10 10 260 24 248 6.93e-56 183
MS.gene44428.t1 MTR_4g116320 50.226 221 70 8 176 364 43 255 3.71e-54 179
MS.gene44428.t1 MTR_4g118370 47.009 234 102 8 144 364 33 257 2.39e-53 177
MS.gene44428.t1 MTR_7g117720 38.655 357 123 11 14 361 2 271 6.15e-51 171
MS.gene44428.t1 MTR_7g079370 37.037 351 165 11 51 361 16 350 8.27e-51 174
MS.gene44428.t1 MTR_4g114700 44.248 226 93 6 141 358 18 218 7.79e-50 167
MS.gene44428.t1 MTR_8g102520 35.526 380 150 13 20 367 6 322 4.08e-48 166
MS.gene44428.t1 MTR_7g079400 39.739 307 125 14 102 367 50 337 5.33e-46 160
MS.gene44428.t1 MTR_6g463430 42.512 207 82 5 191 367 3 202 2.09e-41 144
MS.gene44428.t1 MTR_1g055175 45.685 197 73 6 202 367 8 201 2.17e-41 144
MS.gene44428.t1 MTR_4g117430 52.288 153 35 5 143 268 14 155 3.98e-38 134
MS.gene44428.t1 MTR_4g118360 56.780 118 46 3 251 367 13 126 2.13e-35 126
MS.gene44428.t1 MTR_4g109290 44.379 169 51 3 19 185 6 133 3.73e-34 125
MS.gene44428.t1 MTR_4g109290 68.519 54 16 1 314 367 136 188 4.96e-12 64.7
MS.gene44428.t1 MTR_1g055250 41.414 198 80 8 171 338 49 240 9.68e-33 125
MS.gene44428.t1 MTR_5g023000 57.282 103 37 2 268 367 1 99 5.40e-31 114
MS.gene44428.t1 MTR_1g094210 28.212 358 189 12 22 342 57 383 7.02e-31 121
MS.gene44428.t1 MTR_2g021150 28.721 383 208 16 18 359 10 368 1.09e-30 120
MS.gene44428.t1 MTR_5g069120 42.408 191 85 8 32 211 1 177 6.98e-30 113
MS.gene44428.t1 MTR_4g122860 41.579 190 94 7 187 367 139 320 1.42e-29 117
MS.gene44428.t1 MTR_4g122860 45.455 99 44 4 7 101 54 146 2.65e-11 64.7
MS.gene44428.t1 MTR_1g094210 27.374 358 188 12 22 340 57 381 1.72e-29 117
MS.gene44428.t1 MTR_1g097560 28.571 350 188 14 18 334 32 352 3.42e-28 113
MS.gene44428.t1 MTR_5g057790 29.904 311 177 10 22 307 46 340 1.99e-27 112
MS.gene44428.t1 MTR_8g073550 35.323 201 118 5 18 217 26 215 2.12e-26 105
MS.gene44428.t1 MTR_7g079420 32.740 281 109 10 126 367 905 1144 1.54e-25 108
MS.gene44428.t1 MTR_1g097330 29.429 333 191 12 12 317 6 321 2.32e-25 106
MS.gene44428.t1 MTR_4g023430 62.069 87 32 1 14 100 33 118 2.96e-25 102
MS.gene44428.t1 MTR_4g023430 54.321 81 35 1 289 367 142 222 2.21e-19 86.3
MS.gene44428.t1 MTR_4g055060 28.840 319 177 9 22 306 30 332 4.82e-25 105
MS.gene44428.t1 MTR_2g055970 27.198 364 202 13 10 334 199 538 6.53e-25 106
MS.gene44428.t1 MTR_1g097490 28.490 351 196 12 22 341 49 375 8.14e-25 104
MS.gene44428.t1 MTR_5g057690 28.165 316 166 9 22 307 46 330 8.72e-25 104
MS.gene44428.t1 MTR_3g013740 31.056 322 167 16 22 303 44 350 2.99e-24 103
MS.gene44428.t1 MTR_5g011200 27.414 321 164 13 18 296 13 306 3.51e-24 102
MS.gene44428.t1 MTR_8g467140 28.060 335 182 11 7 303 12 325 4.40e-24 101
MS.gene44428.t1 MTR_8g101580 24.282 383 224 9 16 359 39 394 4.88e-24 102
MS.gene44428.t1 MTR_5g057710 29.085 306 166 9 22 296 46 331 5.54e-24 102
MS.gene44428.t1 MTR_3g014540 28.344 314 168 11 18 296 25 316 8.69e-24 101
MS.gene44428.t1 MTR_5g022420 26.129 310 175 10 18 300 23 305 5.99e-23 99.0
MS.gene44428.t1 MTR_3g007330 30.844 308 159 11 18 295 44 327 9.47e-23 99.0
MS.gene44428.t1 MTR_6g021880 26.257 358 226 8 33 359 31 381 3.88e-22 97.1
MS.gene44428.t1 MTR_5g057020 27.742 310 170 10 22 307 46 325 5.97e-22 95.9
MS.gene44428.t1 MTR_1g056710 26.389 360 197 14 13 334 25 354 7.96e-22 95.9
MS.gene44428.t1 MTR_2g021155 28.438 320 180 12 16 304 30 331 8.07e-22 97.8
MS.gene44428.t1 MTR_4g107820 27.566 341 199 16 22 332 36 358 1.16e-21 95.5
MS.gene44428.t1 MTR_4g107780 27.566 341 199 16 22 332 36 358 1.16e-21 95.5
MS.gene44428.t1 MTR_4g107820 27.647 340 198 16 22 331 36 357 1.18e-21 95.9
MS.gene44428.t1 MTR_4g107780 27.647 340 198 16 22 331 36 357 1.46e-21 95.5
MS.gene44428.t1 MTR_4g061340 30.769 312 156 14 18 291 22 311 2.07e-21 94.7
MS.gene44428.t1 MTR_2g426020 26.062 353 199 13 22 329 6 341 2.76e-21 94.7
MS.gene44428.t1 MTR_2g029990 28.084 381 205 19 23 362 52 404 4.20e-21 94.4
MS.gene44428.t1 MTR_1g055070 26.797 306 185 11 14 299 41 327 4.86e-21 94.0
MS.gene44428.t1 MTR_2g021190 26.974 304 178 9 22 296 21 309 5.43e-21 93.6
MS.gene44428.t1 MTR_3g006670 30.671 313 153 15 18 291 45 332 5.85e-21 94.0
MS.gene44428.t1 MTR_3g009310 29.492 295 169 11 22 291 42 322 7.07e-21 93.2
MS.gene44428.t1 MTR_3g083640 25.385 390 243 15 1 362 35 404 7.38e-21 93.6
MS.gene44428.t1 MTR_3g006530 26.490 302 183 11 22 296 40 329 1.07e-20 92.8
MS.gene44428.t1 MTR_6g027910 27.415 383 227 17 19 362 6 376 1.38e-20 92.4
MS.gene44428.t1 MTR_5g057643 30.909 220 137 6 22 240 46 251 2.98e-20 89.7
MS.gene44428.t1 MTR_7g055870 27.378 431 201 21 22 359 13 424 3.10e-20 91.7
MS.gene44428.t1 MTR_4g108820 25.776 322 163 11 21 315 41 313 4.28e-20 90.1
MS.gene44428.t1 MTR_4g133170 24.478 335 189 10 22 317 4 313 4.57e-20 90.9
MS.gene44428.t1 MTR_7g407070 28.616 318 171 11 18 291 28 333 5.35e-20 90.9
MS.gene44428.t1 MTR_8g098830 35.000 200 82 8 203 367 35 221 5.83e-20 87.8
MS.gene44428.t1 MTR_1g055145 49.020 102 44 3 25 125 36 130 7.93e-20 88.6
MS.gene44428.t1 MTR_0044s0300 28.289 304 168 12 22 296 38 320 9.44e-20 90.1
MS.gene44428.t1 MTR_3g036430 25.418 299 155 10 22 296 20 274 9.87e-20 89.4
MS.gene44428.t1 MTR_3g013770 28.526 312 186 9 12 296 23 324 1.13e-19 89.7
MS.gene44428.t1 MTR_6g007135 26.349 315 189 9 22 304 26 329 1.49e-19 89.4
MS.gene44428.t1 MTR_2g021210 27.937 315 164 14 14 296 78 361 1.59e-19 89.7
MS.gene44428.t1 MTR_3g036290 25.401 374 204 11 18 351 18 356 1.61e-19 89.0
MS.gene44428.t1 MTR_3g014570 29.375 320 173 13 18 304 25 324 1.63e-19 89.4
MS.gene44428.t1 MTR_4g030830 25.187 401 221 15 22 359 9 393 2.94e-19 88.6
MS.gene44428.t1 MTR_3g011100 28.616 318 156 15 18 291 231 521 3.08e-19 89.7
MS.gene44428.t1 MTR_3g010430 27.044 318 175 12 14 296 28 323 3.35e-19 88.6
MS.gene44428.t1 MTR_3g007410 29.808 312 162 15 25 301 55 344 3.67e-19 88.6
MS.gene44428.t1 MTR_4g129190 30.638 235 130 9 22 245 6 218 3.72e-19 88.2
MS.gene44428.t1 MTR_7g028660 25.617 324 175 11 20 295 9 314 3.85e-19 88.2
MS.gene44428.t1 MTR_3g007360 28.529 333 185 15 25 322 55 369 3.92e-19 88.6
MS.gene44428.t1 MTR_3g436150 27.247 356 196 12 18 336 28 357 5.14e-19 87.8
MS.gene44428.t1 MTR_2g025420 25.410 366 198 14 22 327 6 356 8.08e-19 87.8
MS.gene44428.t1 MTR_7g055930 26.037 434 203 20 22 359 13 424 9.50e-19 87.4
MS.gene44428.t1 MTR_5g068040 25.797 345 155 16 13 300 8 308 9.57e-19 87.0
MS.gene44428.t1 MTR_7g070880 24.227 388 195 14 10 317 7 375 1.13e-18 87.0
MS.gene44428.t1 MTR_7g067680 27.576 330 168 14 1 296 24 316 1.27e-18 87.0
MS.gene44428.t1 MTR_1g054725 25.683 366 199 13 9 333 7 340 2.82e-18 85.5
MS.gene44428.t1 MTR_7g070830 24.934 377 180 13 22 317 21 375 3.65e-18 85.9
MS.gene44428.t1 MTR_3g011060 25.970 335 187 12 12 304 18 333 4.09e-18 85.1
MS.gene44428.t1 MTR_2g046900 26.364 330 180 15 7 298 18 322 4.78e-18 85.1
MS.gene44428.t1 MTR_6g034720 50.000 96 40 5 155 245 53 145 5.45e-18 82.0
MS.gene44428.t1 MTR_1g088120 28.235 340 176 13 20 304 8 334 5.66e-18 85.1
MS.gene44428.t1 MTR_6g090180 25.538 372 194 11 21 329 46 397 6.18e-18 85.1
MS.gene44428.t1 MTR_7g079450 44.800 125 54 4 251 367 20 137 6.65e-18 79.7
MS.gene44428.t1 MTR_2g046920 27.492 331 167 13 7 298 14 310 1.20e-17 84.0
MS.gene44428.t1 MTR_2g021252 25.784 287 183 9 25 296 50 321 1.51e-17 83.6
MS.gene44428.t1 MTR_5g057040 31.156 199 124 5 22 219 46 232 1.77e-17 84.7
MS.gene44428.t1 MTR_3g011020 25.617 324 177 11 17 306 23 316 1.82e-17 83.2
MS.gene44428.t1 MTR_5g069930 25.698 358 179 14 20 317 4 334 2.08e-17 83.2
MS.gene44428.t1 MTR_7g056760 29.412 272 150 13 3 249 2 256 2.56e-17 83.2
MS.gene44428.t1 MTR_7g062060 27.490 251 150 8 21 247 11 253 2.61e-17 83.2
MS.gene44428.t1 MTR_4g013180 25.065 383 211 12 19 341 8 374 2.81e-17 83.2
MS.gene44428.t1 MTR_7g066000 26.703 367 197 14 8 317 7 358 3.26e-17 82.8
MS.gene44428.t1 MTR_4g024890 27.966 236 142 8 19 245 7 223 3.55e-17 82.4
MS.gene44428.t1 MTR_5g008530 71.186 59 15 1 20 78 16 72 3.65e-17 75.9
MS.gene44428.t1 MTR_5g043160 27.933 358 188 18 24 314 52 406 3.70e-17 82.8
MS.gene44428.t1 MTR_3g006570 26.367 311 184 10 14 296 13 306 3.77e-17 82.4
MS.gene44428.t1 MTR_5g069760 24.507 355 180 15 20 317 4 327 6.35e-17 81.6
MS.gene44428.t1 MTR_6g065980 26.263 297 162 13 22 291 16 282 6.59e-17 81.6
MS.gene44428.t1 MTR_8g013005 68.333 60 18 1 308 367 1 59 9.84e-17 73.9
MS.gene44428.t1 MTR_3g007430 27.551 294 171 9 25 291 46 324 1.19e-16 80.9
MS.gene44428.t1 MTR_4g080200 30.901 233 132 10 20 246 1 210 1.29e-16 80.5
MS.gene44428.t1 MTR_7g013590 27.564 312 171 10 19 296 35 325 1.32e-16 80.9
MS.gene44428.t1 MTR_2g028130 23.919 347 195 11 22 314 5 336 1.35e-16 80.9
MS.gene44428.t1 MTR_5g096900 29.804 255 140 9 21 251 11 250 1.38e-16 80.1
MS.gene44428.t1 MTR_2g461450 27.338 278 154 7 19 296 15 244 1.46e-16 80.5
MS.gene44428.t1 MTR_4g070550 23.573 403 226 16 22 364 5 385 2.19e-16 80.1
MS.gene44428.t1 MTR_0267s0050 27.479 353 176 17 25 317 9 341 2.67e-16 80.1
MS.gene44428.t1 MTR_0667s0010 24.138 319 171 12 22 291 6 302 4.52e-16 79.3
MS.gene44428.t1 MTR_3g024110 26.045 311 175 11 15 296 94 378 4.82e-16 79.3
MS.gene44428.t1 MTR_1g055375 25.166 302 185 10 25 296 7 297 4.85e-16 79.0
MS.gene44428.t1 MTR_6g004660 27.607 326 170 14 13 291 4 310 5.47e-16 79.0
MS.gene44428.t1 MTR_6g053260 25.135 370 218 13 14 353 329 669 5.54e-16 79.7
MS.gene44428.t1 MTR_2g426090 23.438 320 170 11 25 291 9 306 5.57e-16 79.0
MS.gene44428.t1 MTR_3g010520 23.197 319 192 10 1 296 3 291 5.57e-16 78.6
MS.gene44428.t1 MTR_7g056170 23.969 388 217 13 19 343 72 444 5.99e-16 79.3
MS.gene44428.t1 MTR_6g017280 24.234 359 196 13 17 317 4 344 6.17e-16 79.0
MS.gene44428.t1 MTR_2g028140 25.959 339 182 15 22 303 5 331 6.33e-16 79.0
MS.gene44428.t1 MTR_2g046830 23.248 314 179 11 21 298 24 311 6.59e-16 79.0
MS.gene44428.t1 MTR_2g426070 26.822 343 185 16 23 314 7 334 6.65e-16 79.0
MS.gene44428.t1 MTR_6g017270 22.687 335 182 11 18 317 5 297 6.66e-16 78.2
MS.gene44428.t1 MTR_3g009240 27.946 297 167 12 22 291 36 312 7.00e-16 78.6
MS.gene44428.t1 MTR_3g010390 25.478 314 191 8 18 295 29 335 7.12e-16 78.6
MS.gene44428.t1 MTR_2g028160 24.586 362 202 13 22 327 5 351 7.33e-16 79.0
MS.gene44428.t1 MTR_2g078900 25.796 314 170 13 18 296 29 314 7.41e-16 78.2
MS.gene44428.t1 MTR_1g115160 27.451 306 166 15 20 296 20 298 7.73e-16 78.6
MS.gene44428.t1 MTR_7g055977 23.810 378 216 12 19 341 4 364 7.91e-16 78.6
MS.gene44428.t1 MTR_1g055200 50.000 90 35 4 123 211 5 85 8.17e-16 73.2
MS.gene44428.t1 MTR_7g066100 25.000 404 224 15 20 361 9 395 8.59e-16 78.6
MS.gene44428.t1 MTR_2g021770 26.250 400 220 14 25 360 15 403 8.83e-16 78.6
MS.gene44428.t1 MTR_0128s0020 28.698 338 163 16 11 293 3 317 9.69e-16 78.2
MS.gene44428.t1 MTR_3g072470 28.451 355 169 14 12 304 9 340 1.08e-15 78.2
MS.gene44428.t1 MTR_2g047892 26.820 261 153 10 10 257 11 246 1.11e-15 78.2
MS.gene44428.t1 MTR_3g058440 29.231 260 155 12 18 263 30 274 1.17e-15 77.0
MS.gene44428.t1 MTR_5g007610 25.705 319 169 12 22 295 41 336 1.40e-15 77.8
MS.gene44428.t1 MTR_5g023570 36.923 130 64 5 17 143 32 146 1.78e-15 73.2
MS.gene44428.t1 MTR_2g426060 25.305 328 170 14 22 295 6 312 2.17e-15 77.4
MS.gene44428.t1 MTR_6g086825 24.286 420 231 17 15 365 60 461 2.34e-15 77.4
MS.gene44428.t1 MTR_3g464470 25.974 231 143 6 21 245 6 214 2.53e-15 77.0
MS.gene44428.t1 MTR_5g048160 29.630 216 125 8 22 222 4 207 2.64e-15 77.0
MS.gene44428.t1 MTR_7g022600 31.343 268 131 14 9 245 8 253 3.52e-15 76.6
MS.gene44428.t1 MTR_3g011650 32.653 196 108 8 25 216 82 257 4.02e-15 75.5
MS.gene44428.t1 MTR_3g030310 25.658 304 184 12 22 296 21 311 4.06e-15 76.3
MS.gene44428.t1 MTR_4g030090 28.511 235 143 7 22 245 14 234 4.30e-15 76.3
MS.gene44428.t1 MTR_7g052150 31.963 219 105 9 15 217 16 206 4.50e-15 76.3
MS.gene44428.t1 MTR_4g030110 27.626 257 154 7 2 245 10 247 4.82e-15 76.3
MS.gene44428.t1 MTR_1g054575 24.601 313 166 12 22 296 52 332 4.88e-15 77.0
MS.gene44428.t1 MTR_8g099460 25.000 348 198 14 22 325 5 333 4.94e-15 76.3
MS.gene44428.t1 MTR_2g021050 24.367 316 162 11 22 295 5 285 5.18e-15 75.9
MS.gene44428.t1 MTR_3g007270 26.791 321 164 13 22 295 47 343 5.38e-15 76.3
MS.gene44428.t1 MTR_7g007300 24.282 383 219 16 15 359 96 445 5.40e-15 76.3
MS.gene44428.t1 MTR_3g013950 24.631 406 220 18 20 362 5 387 7.67e-15 75.5
MS.gene44428.t1 MTR_1g068835 23.642 313 175 9 22 295 4 291 8.52e-15 75.5
MS.gene44428.t1 MTR_3g083010 24.518 363 208 12 22 329 6 357 9.88e-15 75.5
MS.gene44428.t1 MTR_2g046800 26.012 346 185 14 18 308 10 339 1.05e-14 75.1
MS.gene44428.t1 MTR_7g056200 25.281 356 167 15 20 317 21 335 1.13e-14 75.1
MS.gene44428.t1 MTR_7g061090 24.781 343 194 9 1 291 1 331 1.22e-14 75.1
MS.gene44428.t1 MTR_3g010870 26.814 317 161 13 18 296 33 316 1.28e-14 74.7
MS.gene44428.t1 MTR_3g023930 25.168 298 168 11 22 296 34 299 1.39e-14 74.7
MS.gene44428.t1 MTR_7g056797 28.839 267 147 13 3 245 2 249 1.46e-14 74.7
MS.gene44428.t1 MTR_3g058470 25.337 371 213 13 22 362 37 373 1.47e-14 74.7
MS.gene44428.t1 MTR_3g024040 25.581 301 176 11 28 304 37 313 1.53e-14 74.7
MS.gene44428.t1 MTR_7g055987 28.889 360 166 19 12 315 10 335 1.77e-14 74.3
MS.gene44428.t1 MTR_3g096250 26.855 283 162 11 22 296 47 292 2.18e-14 73.9
MS.gene44428.t1 MTR_5g046260 24.382 283 164 11 22 291 4 249 2.20e-14 73.2
MS.gene44428.t1 MTR_7g062100 30.894 246 118 8 22 245 24 239 2.26e-14 74.3
MS.gene44428.t1 MTR_2g028110 24.242 396 216 16 22 366 4 366 2.28e-14 73.9
MS.gene44428.t1 MTR_3g010920 26.471 340 187 14 22 329 44 352 2.41e-14 73.9
MS.gene44428.t1 MTR_6g053240 23.873 377 211 16 18 353 24 365 2.72e-14 73.9
MS.gene44428.t1 MTR_0064s0160 30.000 220 124 9 21 222 41 248 2.85e-14 73.9
MS.gene44428.t1 MTR_4g031770 24.522 314 171 12 22 296 4 290 2.99e-14 73.6
MS.gene44428.t1 MTR_4g028510 24.397 373 208 15 13 329 7 361 3.03e-14 73.9
MS.gene44428.t1 MTR_7g070440 24.425 348 188 12 18 308 3 332 3.06e-14 73.6
MS.gene44428.t1 MTR_2g104340 24.570 407 213 16 21 360 13 392 3.08e-14 73.9
MS.gene44428.t1 MTR_4g130330 27.928 333 169 16 21 295 6 325 3.18e-14 73.6
MS.gene44428.t1 MTR_1g114700 26.730 318 170 11 18 296 25 318 3.72e-14 73.6
MS.gene44428.t1 MTR_3g009260 26.647 334 166 17 12 304 33 328 3.77e-14 73.6
MS.gene44428.t1 MTR_3g058480 28.713 202 133 6 22 217 39 235 4.16e-14 72.8
MS.gene44428.t1 MTR_2g047200 23.476 328 189 10 11 291 9 321 4.70e-14 73.2
MS.gene44428.t1 MTR_4g030760 24.716 352 171 13 22 317 73 386 5.60e-14 73.2
MS.gene44428.t1 MTR_7g017040 23.934 422 224 19 11 365 8 399 6.65e-14 72.8
MS.gene44428.t1 MTR_0760s0010 27.243 301 167 11 27 300 52 327 6.82e-14 72.8
MS.gene44428.t1 MTR_3g010590 26.129 310 157 13 22 296 39 311 6.95e-14 72.8
MS.gene44428.t1 MTR_3g036335 25.987 304 179 13 17 291 36 322 8.37e-14 72.4
MS.gene44428.t1 MTR_6g004210 25.559 313 183 9 33 300 36 343 1.01e-13 72.4
MS.gene44428.t1 MTR_7g022670 36.170 141 65 5 10 137 9 137 1.12e-13 71.6
MS.gene44428.t1 MTR_3g024150 25.987 304 169 11 25 296 38 317 1.30e-13 72.0
MS.gene44428.t1 MTR_7g060940 25.060 415 218 18 7 358 8 392 1.55e-13 71.6
MS.gene44428.t1 MTR_0115s0020 27.982 218 126 9 22 222 10 213 1.63e-13 71.6
MS.gene44428.t1 MTR_7g066010 24.000 325 205 9 20 317 19 328 1.69e-13 71.2
MS.gene44428.t1 MTR_2g078850 25.658 304 172 11 25 296 33 314 1.85e-13 71.2
MS.gene44428.t1 MTR_3g030250 24.585 301 175 11 22 296 37 311 2.15e-13 71.2
MS.gene44428.t1 MTR_4g013185 25.668 374 190 15 21 317 9 371 2.18e-13 71.2
MS.gene44428.t1 MTR_5g096710 24.750 400 223 16 18 359 19 398 2.23e-13 71.2
MS.gene44428.t1 MTR_7g077970 26.923 338 183 12 22 304 7 335 2.25e-13 71.2
MS.gene44428.t1 MTR_0649s0020 24.685 397 187 18 22 342 11 371 2.49e-13 70.9
MS.gene44428.t1 MTR_3g010620 25.733 307 171 14 18 296 29 306 2.56e-13 70.9
MS.gene44428.t1 MTR_3g009250 31.250 208 118 8 12 216 33 218 2.74e-13 69.3
MS.gene44428.t1 MTR_1g068860 23.567 314 176 10 22 295 4 293 2.79e-13 70.9
MS.gene44428.t1 MTR_3g007300 27.273 297 150 12 18 291 45 298 3.12e-13 70.5
MS.gene44428.t1 MTR_3g030330 25.987 304 170 12 22 296 20 297 3.27e-13 70.5
MS.gene44428.t1 MTR_4g028660 24.552 391 202 18 13 339 7 368 3.75e-13 70.5
MS.gene44428.t1 MTR_4g027450 24.552 391 202 18 13 339 7 368 3.75e-13 70.5
MS.gene44428.t1 MTR_7g079640 24.211 380 194 15 21 342 12 355 4.23e-13 70.1
MS.gene44428.t1 MTR_0128s0070 27.988 343 170 16 11 299 7 326 4.43e-13 70.5
MS.gene44428.t1 MTR_3g464500 25.410 366 193 15 10 317 16 359 4.62e-13 70.1
MS.gene44428.t1 MTR_3g010440 23.235 340 200 11 18 344 22 313 5.23e-13 69.7
MS.gene44428.t1 MTR_6g034830 35.714 140 69 4 1 140 1 119 6.81e-13 65.1
MS.gene44428.t1 MTR_7g066030 21.615 384 225 13 20 342 19 387 7.97e-13 69.7
MS.gene44428.t1 MTR_4g028750 24.543 383 211 15 13 339 7 367 8.45e-13 69.3
MS.gene44428.t1 MTR_2g437110 25.781 384 232 16 19 359 19 392 9.74e-13 69.7
MS.gene44428.t1 MTR_0097s0030 25.926 324 160 13 22 293 14 309 1.15e-12 68.9
MS.gene44428.t1 MTR_2g047240 25.926 324 160 13 22 293 14 309 1.15e-12 68.9
MS.gene44428.t1 MTR_1g022200 25.455 385 204 15 25 360 18 368 1.27e-12 68.9
MS.gene44428.t1 MTR_2g047878 26.158 367 206 19 13 343 11 348 1.44e-12 68.6
MS.gene44428.t1 MTR_7g050480 28.767 219 128 7 8 217 4 203 1.48e-12 68.6
MS.gene44428.t1 MTR_7g091640 24.629 337 186 12 8 293 21 340 1.57e-12 68.6
MS.gene44428.t1 MTR_5g027370 25.074 339 200 13 1 293 1 331 1.58e-12 68.9
MS.gene44428.t1 MTR_5g027330 25.074 339 200 13 1 293 12 342 1.66e-12 68.9
MS.gene44428.t1 MTR_6g048140 28.247 308 170 12 22 296 39 328 1.76e-12 68.6
MS.gene44428.t1 MTR_7g035295 35.165 182 95 6 19 185 13 186 2.13e-12 68.2
MS.gene44428.t1 MTR_2g043410 26.331 338 158 13 19 293 19 328 2.27e-12 68.2
MS.gene44428.t1 MTR_1g112930 24.675 308 172 11 22 296 25 305 2.33e-12 68.2
MS.gene44428.t1 MTR_3g010870 27.092 251 143 10 18 258 33 253 2.36e-12 67.4
MS.gene44428.t1 MTR_4g019990 26.087 230 156 7 21 245 5 225 2.45e-12 68.2
MS.gene44428.t1 MTR_7g078840 28.794 257 142 10 20 245 8 254 2.63e-12 68.2
MS.gene44428.t1 MTR_5g010660 25.691 362 222 15 22 360 34 371 2.99e-12 68.2
MS.gene44428.t1 MTR_0831s0010 24.181 397 216 16 21 360 49 417 3.18e-12 67.8
MS.gene44428.t1 MTR_7g055850 33.163 196 98 9 22 190 13 202 3.22e-12 67.0
MS.gene44428.t1 MTR_4g129160 24.650 357 198 14 22 314 7 356 3.30e-12 67.4
MS.gene44428.t1 MTR_5g037680 25.871 402 208 19 21 359 7 381 3.74e-12 67.8
MS.gene44428.t1 MTR_2g021950 22.760 413 226 14 14 360 8 393 3.87e-12 67.4
MS.gene44428.t1 MTR_7g050520 28.571 210 116 6 18 217 18 203 4.24e-12 67.4
MS.gene44428.t1 MTR_3g030350 24.860 358 205 14 18 334 31 365 5.67e-12 67.0
MS.gene44428.t1 MTR_6g461660 23.977 342 185 12 21 301 18 345 6.49e-12 66.6
MS.gene44428.t1 MTR_7g077070 27.490 251 146 9 20 245 14 253 6.71e-12 67.0
MS.gene44428.t1 MTR_6g055210 26.444 329 181 15 21 300 21 337 8.20e-12 66.6
MS.gene44428.t1 MTR_1g068875 24.038 312 174 12 22 295 4 290 8.26e-12 66.2
MS.gene44428.t1 MTR_3g010970 24.746 295 175 11 25 296 51 321 8.48e-12 66.2
MS.gene44428.t1 MTR_7g078860 30.055 183 106 6 21 189 8 182 8.99e-12 66.2
MS.gene44428.t1 MTR_4g037465 25.926 351 183 16 22 317 21 349 1.08e-11 66.2
MS.gene44428.t1 MTR_7g061050 24.786 351 169 11 20 310 11 326 1.17e-11 65.9
MS.gene44428.t1 MTR_4g023100 60.345 58 18 2 311 367 66 119 1.19e-11 61.6
MS.gene44428.t1 MTR_2g031680 24.204 314 171 13 22 295 6 292 1.50e-11 65.5
MS.gene44428.t1 MTR_4g024870 25.403 248 162 8 6 245 28 260 2.01e-11 65.5
MS.gene44428.t1 MTR_7g052670 30.556 180 115 4 19 188 18 197 2.15e-11 65.5
MS.gene44428.t1 MTR_7g061060 24.789 355 187 12 20 317 11 342 2.26e-11 65.1
MS.gene44428.t1 MTR_1g023400 25.858 379 205 18 25 360 6 351 2.51e-11 64.7
MS.gene44428.t1 MTR_1g007450 22.546 377 231 9 22 346 12 379 2.66e-11 65.1
MS.gene44428.t1 MTR_3g080370 24.368 435 220 18 10 359 7 417 3.10e-11 64.7
MS.gene44428.t1 MTR_1g442850 31.390 223 95 10 21 217 4 194 3.10e-11 64.7
MS.gene44428.t1 MTR_7g050490 28.910 211 114 7 17 216 3 188 3.49e-11 62.0
MS.gene44428.t1 MTR_4g033495 27.686 242 121 10 22 242 27 235 3.68e-11 64.7
MS.gene44428.t1 MTR_4g011660 32.804 189 107 8 12 187 9 190 3.98e-11 64.3
MS.gene44428.t1 MTR_6g016285 23.709 426 212 18 20 359 19 417 4.12e-11 64.3
MS.gene44428.t1 MTR_2g047832 25.974 231 140 8 21 244 28 234 4.64e-11 64.3
MS.gene44428.t1 MTR_5g074870 60.465 43 17 0 22 64 82 124 5.04e-11 60.8
MS.gene44428.t1 MTR_7g056260 26.000 250 132 10 19 245 11 230 5.09e-11 63.5
MS.gene44428.t1 MTR_7g056003 25.737 373 164 17 25 317 18 357 5.32e-11 63.9
MS.gene44428.t1 MTR_5g097680 23.697 422 236 19 21 365 16 428 7.00e-11 63.5
MS.gene44428.t1 MTR_2g010920 25.882 340 172 16 22 293 20 347 7.97e-11 63.5
MS.gene44428.t1 MTR_3g023940 25.080 311 174 12 22 296 34 321 8.46e-11 63.2
MS.gene44428.t1 MTR_6g460450 50.909 55 26 1 12 66 20 73 8.84e-11 60.1
MS.gene44428.t1 MTR_7g069550 23.969 388 196 18 22 337 14 374 9.03e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44428.t1 AT3G23880 28.800 375 202 16 22 359 14 360 3.82e-27 110
MS.gene44428.t1 AT4G12560 26.448 397 213 15 22 365 4 374 7.83e-20 90.5
MS.gene44428.t1 AT4G12560 26.448 397 213 15 22 365 4 374 7.83e-20 90.5
MS.gene44428.t1 AT4G12560 26.448 397 213 15 22 365 4 374 7.83e-20 90.5
MS.gene44428.t1 AT4G19940 27.386 241 153 7 14 245 27 254 2.98e-14 73.9
MS.gene44428.t1 AT5G49610 27.897 233 143 6 22 249 9 221 5.96e-14 72.8
MS.gene44428.t1 AT1G47300 31.455 213 106 8 22 204 6 208 2.52e-13 70.5
MS.gene44428.t1 AT1G33530 28.163 245 141 10 8 244 76 293 4.21e-13 70.5
MS.gene44428.t1 AT1G11270 26.070 257 154 9 2 245 13 246 9.52e-13 68.6
MS.gene44428.t1 AT1G11270 26.070 257 154 9 2 245 13 246 9.52e-13 68.6
MS.gene44428.t1 AT3G10240 27.381 252 138 12 22 262 27 244 1.28e-12 68.9
MS.gene44428.t1 AT3G16210 27.632 228 128 9 21 245 4 197 1.35e-12 68.6
MS.gene44428.t1 AT1G12870 25.896 251 157 10 8 246 19 252 1.93e-12 68.6
MS.gene44428.t1 AT1G50870 42.683 82 40 1 2 76 4 85 5.99e-12 67.0

Find 84 sgRNAs with CRISPR-Local

Find 96 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATGTTCGTCGCGTAAAT+TGG 0.195446 8.1:+24783694 None:intergenic
TTCAAAATCATAATAAGATT+TGG 0.206976 8.1:+24783841 None:intergenic
AAACGCATTTAAAACGAATA+AGG 0.213430 8.1:+24784068 None:intergenic
GATTGTGGTTTGTGGGTATT+TGG 0.241982 8.1:-24783345 MS.gene44428:CDS
TCATCGTAGCTACTTGTATA+AGG 0.256905 8.1:+24783518 None:intergenic
ATAATAGTACAGCTGAAATA+TGG 0.258630 8.1:-24783290 MS.gene44428:CDS
ATTATAGAGGCACCCTGCTT+TGG 0.270652 8.1:+24783490 None:intergenic
ATTCTTCAAAACTCTATCTA+TGG 0.290808 8.1:-24783766 MS.gene44428:CDS
GATCACAGTATTGTAATAAT+AGG 0.306433 8.1:+24783619 None:intergenic
GACGAACATTTCTATGGTTT+AGG 0.311221 8.1:-24783683 MS.gene44428:CDS
TTATAGAGGCACCCTGCTTT+GGG 0.321689 8.1:+24783491 None:intergenic
AAAGCAGGGTGCCTCTATAA+TGG 0.327045 8.1:-24783488 MS.gene44428:CDS
GAGAGAGGAGTTTGATGATC+TGG 0.329102 8.1:+24783944 None:intergenic
TTACGCGACGAACATTTCTA+TGG 0.332601 8.1:-24783689 MS.gene44428:CDS
TCAAAATCATAATAAGATTT+GGG 0.354108 8.1:+24783842 None:intergenic
ACGAACATTTCTATGGTTTA+GGG 0.370783 8.1:-24783682 MS.gene44428:CDS
AAGCAGGGTGCCTCTATAAT+GGG 0.371254 8.1:-24783487 MS.gene44428:CDS
TCTATAATGGGGCTATTCAT+TGG 0.373487 8.1:-24783475 MS.gene44428:CDS
TGATAACTCAAATCCTCTTA+AGG 0.384495 8.1:-24784105 MS.gene44428:CDS
AACGCATTTAAAACGAATAA+GGG 0.395784 8.1:+24784069 None:intergenic
TCAAATCCTCTTAAGGTTAC+CGG 0.400804 8.1:-24784098 MS.gene44428:CDS
TTAAATGCGTTTGTAAGTCT+TGG 0.408309 8.1:-24784057 MS.gene44428:CDS
CAAATACCTTTGTCCCCTCT+TGG 0.408500 8.1:-24783719 MS.gene44428:CDS
TCCTATGGATTGTGGTTTGT+GGG 0.425204 8.1:-24783352 MS.gene44428:CDS
ACTTCACCGGTAACCTTAAG+AGG 0.429946 8.1:+24784092 None:intergenic
ATCCTATGGATTGTGGTTTG+TGG 0.444692 8.1:-24783353 MS.gene44428:CDS
TACGATGATAAGCCCAAAGC+AGG 0.447340 8.1:-24783503 MS.gene44428:CDS
ATTGGAACAGATGGTGGTAC+TGG 0.468517 8.1:-24783153 MS.gene44428:CDS
ATATGATATTCCATCATACT+TGG 0.472815 8.1:-24783594 MS.gene44428:CDS
CACTGTGATCCTATGGATTG+TGG 0.475668 8.1:-24783360 MS.gene44428:CDS
AAGTGAAGCGGAAGCGGAAG+CGG 0.475802 8.1:+24783883 None:intergenic
TAATAGTACAGCTGAAATAT+GGG 0.480639 8.1:-24783289 MS.gene44428:CDS
TGATTGGGAAAGTCATCAAC+AGG 0.485811 8.1:+24783216 None:intergenic
AGAGCATTCCTCCATTGATC+GGG 0.489163 8.1:-24783097 MS.gene44428:CDS
TCTCATTGCGAAACAATACA+TGG 0.493782 8.1:-24783565 MS.gene44428:CDS
ACCACACGAATCCCGATCAA+TGG 0.499167 8.1:+24783086 None:intergenic
AAGATTAAGTGAAGCGGAAG+CGG 0.501678 8.1:+24783877 None:intergenic
CATCGTAGCTACTTGTATAA+GGG 0.502407 8.1:+24783519 None:intergenic
TAATGGGGCTATTCATTGGT+TGG 0.502486 8.1:-24783471 MS.gene44428:CDS
AATACAAAATCAATTCGTCT+TGG 0.508534 8.1:-24783257 MS.gene44428:CDS
AATGAATAGCCCCATTATAG+AGG 0.512893 8.1:+24783477 None:intergenic
GAAATTAAAGGTTCATGTAG+AGG 0.523080 8.1:-24783821 MS.gene44428:CDS
TAGAGCATTCCTCCATTGAT+CGG 0.523193 8.1:-24783098 MS.gene44428:CDS
AAATTAAAGGTTCATGTAGA+GGG 0.530849 8.1:-24783820 MS.gene44428:CDS
AAATGTGAATTTGTAAAATG+AGG 0.533580 8.1:+24784016 None:intergenic
ATTGATCGGGATTCGTGTGG+TGG 0.541108 8.1:-24783084 MS.gene44428:CDS
GTCAACCGATGATTACTTGG+TGG 0.543507 8.1:-24783651 MS.gene44428:CDS
TGAGTCAACCGATGATTACT+TGG 0.546599 8.1:-24783654 MS.gene44428:CDS
GAGTTATCAACTCATGAGGT+AGG 0.554989 8.1:+24784119 None:intergenic
GGTGATATTATTGGAACAGA+TGG 0.560748 8.1:-24783162 MS.gene44428:CDS
CGCGTAAATTGGAACCAAGA+GGG 0.567554 8.1:+24783705 None:intergenic
TATCTATGGAATTCATCCAC+TGG 0.577525 8.1:-24783752 MS.gene44428:CDS
AAGAGAAACAACGATGGCAG+AGG 0.585249 8.1:-24784178 MS.gene44428:CDS
AAAATCAAGATTAAGTGAAG+CGG 0.589148 8.1:+24783871 None:intergenic
TCCATTGATCGGGATTCGTG+TGG 0.591950 8.1:-24783087 MS.gene44428:CDS
TCATGAGGTAGGTACAGTAA+TGG 0.593572 8.1:+24784130 None:intergenic
AAACGAATAAGGGACTTCAC+CGG 0.598463 8.1:+24784079 None:intergenic
TAAAACCACCAAGTAATCAT+CGG 0.600604 8.1:+24783646 None:intergenic
AATTCTACGAGTGGGTGTTG+TGG 0.601123 8.1:+24783982 None:intergenic
TAAGCTTGCTCATTGTCACA+AGG 0.608287 8.1:+24783021 None:intergenic
TATTTGTTTGTGAAGTCCAG+TGG 0.609460 8.1:+24783736 None:intergenic
TTGGAACCAAGAGGGGACAA+AGG 0.613590 8.1:+24783713 None:intergenic
ACGGTGTATACATAGCCACT+TGG 0.614071 8.1:+24783058 None:intergenic
CGGTGTATACATAGCCACTT+GGG 0.614341 8.1:+24783059 None:intergenic
CGTAGCTACTTGTATAAGGG+TGG 0.617261 8.1:+24783522 None:intergenic
GCGTAAATTGGAACCAAGAG+GGG 0.619064 8.1:+24783706 None:intergenic
TCTACGAGTGGGTGTTGTGG+CGG 0.621108 8.1:+24783985 None:intergenic
ACAACGATGGCAGAGGACGA+AGG 0.624614 8.1:-24784171 MS.gene44428:CDS
AACAGATGGTGGTACTGGAT+TGG 0.625571 8.1:-24783148 MS.gene44428:CDS
ATTTGAGTTATCAACTCATG+AGG 0.627740 8.1:+24784115 None:intergenic
GCTTCTATGTCTACAGAGAG+AGG 0.629876 8.1:+24783929 None:intergenic
ACCCACAAACCACAATCCAT+AGG 0.640888 8.1:+24783351 None:intergenic
CAAGGGAGTGAAAGTAGAGA+CGG 0.648740 8.1:+24783039 None:intergenic
AAGCTTGCTCATTGTCACAA+GGG 0.648928 8.1:+24783022 None:intergenic
ATGAACAGAATTCTACGAGT+GGG 0.650401 8.1:+24783974 None:intergenic
ACACGAATCCCGATCAATGG+AGG 0.658441 8.1:+24783089 None:intergenic
AGCAGGGTGCCTCTATAATG+GGG 0.666385 8.1:-24783486 MS.gene44428:CDS
GATATTATTGGAACAGATGG+TGG 0.666571 8.1:-24783159 MS.gene44428:CDS
TTCGTGTGGTGGATCCCAAG+TGG 0.668800 8.1:-24783073 MS.gene44428:CDS
TCGCGTAAATTGGAACCAAG+AGG 0.671601 8.1:+24783704 None:intergenic
ACGATGATAAGCCCAAAGCA+GGG 0.688005 8.1:-24783502 MS.gene44428:CDS
TATGAACAGAATTCTACGAG+TGG 0.694833 8.1:+24783973 None:intergenic
GAAATGAAGAGAAACAACGA+TGG 0.698891 8.1:-24784184 MS.gene44428:CDS
TTGGTGAAGTATGATGACAA+TGG 0.745035 8.1:-24783129 MS.gene44428:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTATGATTTTGAAATTAA+AGG - chr8.1:24783368-24783387 MS.gene44428:CDS 10.0%
!! TCAAAATCATAATAAGATTT+GGG + chr8.1:24783362-24783381 None:intergenic 15.0%
!! TTCAAAATCATAATAAGATT+TGG + chr8.1:24783363-24783382 None:intergenic 15.0%
!! AAATGTGAATTTGTAAAATG+AGG + chr8.1:24783188-24783207 None:intergenic 20.0%
!! ACAAAAAATGGTGATATTAT+TGG - chr8.1:24784030-24784049 MS.gene44428:CDS 20.0%
!! TATATCTAAAAGATTCCTTT+CGG + chr8.1:24783794-24783813 None:intergenic 20.0%
! AAAATCAAGATTAAGTGAAG+CGG + chr8.1:24783333-24783352 None:intergenic 25.0%
! AAATTAAAGGTTCATGTAGA+GGG - chr8.1:24783381-24783400 MS.gene44428:intron 25.0%
! AATACAAAATCAATTCGTCT+TGG - chr8.1:24783944-24783963 MS.gene44428:CDS 25.0%
! ATAATAGTACAGCTGAAATA+TGG - chr8.1:24783911-24783930 MS.gene44428:CDS 25.0%
! ATATGATATTCCATCATACT+TGG - chr8.1:24783607-24783626 MS.gene44428:CDS 25.0%
! ATTCTTCAAAACTCTATCTA+TGG - chr8.1:24783435-24783454 MS.gene44428:intron 25.0%
! GAAAACCTACATAATCATAT+GGG + chr8.1:24783822-24783841 None:intergenic 25.0%
! GATCACAGTATTGTAATAAT+AGG + chr8.1:24783585-24783604 None:intergenic 25.0%
! TAATAGTACAGCTGAAATAT+GGG - chr8.1:24783912-24783931 MS.gene44428:CDS 25.0%
! TGAAAACCTACATAATCATA+TGG + chr8.1:24783823-24783842 None:intergenic 25.0%
!! AAACGCATTTAAAACGAATA+AGG + chr8.1:24783136-24783155 None:intergenic 25.0%
!! AACGCATTTAAAACGAATAA+GGG + chr8.1:24783135-24783154 None:intergenic 25.0%
!!! AATGCTAAAAAGTACTGATT+GGG + chr8.1:24784003-24784022 None:intergenic 25.0%
ACGAACATTTCTATGGTTTA+GGG - chr8.1:24783519-24783538 MS.gene44428:CDS 30.0%
CATTTCCCATATGATTATGT+AGG - chr8.1:24783814-24783833 MS.gene44428:CDS 30.0%
GAAATTAAAGGTTCATGTAG+AGG - chr8.1:24783380-24783399 MS.gene44428:intron 30.0%
GCATTGTGTTGTACAAAAAA+TGG - chr8.1:24784018-24784037 MS.gene44428:CDS 30.0%
TAAAACCACCAAGTAATCAT+CGG + chr8.1:24783558-24783577 None:intergenic 30.0%
TGATAACTCAAATCCTCTTA+AGG - chr8.1:24783096-24783115 MS.gene44428:CDS 30.0%
TTAAATGCGTTTGTAAGTCT+TGG - chr8.1:24783144-24783163 MS.gene44428:CDS 30.0%
! ATTTGAGTTATCAACTCATG+AGG + chr8.1:24783089-24783108 None:intergenic 30.0%
!! CAATGCTAAAAAGTACTGAT+TGG + chr8.1:24784004-24784023 None:intergenic 30.0%
!! TTGCATTTGATTTTACCGAA+AGG - chr8.1:24783776-24783795 MS.gene44428:CDS 30.0%
!!! TGATTACTTGGTGGTTTTAA+TGG - chr8.1:24783559-24783578 MS.gene44428:CDS 30.0%
AATGAATAGCCCCATTATAG+AGG + chr8.1:24783727-24783746 None:intergenic 35.0%
ATGAACAGAATTCTACGAGT+GGG + chr8.1:24783230-24783249 None:intergenic 35.0%
CATCGTAGCTACTTGTATAA+GGG + chr8.1:24783685-24783704 None:intergenic 35.0%
GACGAACATTTCTATGGTTT+AGG - chr8.1:24783518-24783537 MS.gene44428:CDS 35.0%
GAGAAAAACTCCAAGTATGA+TGG + chr8.1:24783620-24783639 None:intergenic 35.0%
GATATTATTGGAACAGATGG+TGG - chr8.1:24784042-24784061 MS.gene44428:CDS 35.0%
GGTGATATTATTGGAACAGA+TGG - chr8.1:24784039-24784058 MS.gene44428:CDS 35.0%
TATCTATGGAATTCATCCAC+TGG - chr8.1:24783449-24783468 MS.gene44428:intron 35.0%
TATGAACAGAATTCTACGAG+TGG + chr8.1:24783231-24783250 None:intergenic 35.0%
TATTTGTTTGTGAAGTCCAG+TGG + chr8.1:24783468-24783487 None:intergenic 35.0%
TCAAATCCTCTTAAGGTTAC+CGG - chr8.1:24783103-24783122 MS.gene44428:CDS 35.0%
TCATCGTAGCTACTTGTATA+AGG + chr8.1:24783686-24783705 None:intergenic 35.0%
TCTCATTGCGAAACAATACA+TGG - chr8.1:24783636-24783655 MS.gene44428:CDS 35.0%
TTGGTGAAGTATGATGACAA+TGG - chr8.1:24784072-24784091 MS.gene44428:CDS 35.0%
! TCTATAATGGGGCTATTCAT+TGG - chr8.1:24783726-24783745 MS.gene44428:CDS 35.0%
AAACGAATAAGGGACTTCAC+CGG + chr8.1:24783125-24783144 None:intergenic 40.0%
AAGATTAAGTGAAGCGGAAG+CGG + chr8.1:24783327-24783346 None:intergenic 40.0%
GAAATGTTCGTCGCGTAAAT+TGG + chr8.1:24783510-24783529 None:intergenic 40.0%
GAGTTATCAACTCATGAGGT+AGG + chr8.1:24783085-24783104 None:intergenic 40.0%
TAATGGGGCTATTCATTGGT+TGG - chr8.1:24783730-24783749 MS.gene44428:CDS 40.0%
TCATGAGGTAGGTACAGTAA+TGG + chr8.1:24783074-24783093 None:intergenic 40.0%
TGAGTCAACCGATGATTACT+TGG - chr8.1:24783547-24783566 MS.gene44428:CDS 40.0%
TGATTGGGAAAGTCATCAAC+AGG + chr8.1:24783988-24784007 None:intergenic 40.0%
TTACGCGACGAACATTTCTA+TGG - chr8.1:24783512-24783531 MS.gene44428:CDS 40.0%
! AAGCTTGCTCATTGTCACAA+GGG + chr8.1:24784182-24784201 None:intergenic 40.0%
! AGGTTTTCACTGTGATCCTA+TGG - chr8.1:24783834-24783853 MS.gene44428:CDS 40.0%
! ATCCTATGGATTGTGGTTTG+TGG - chr8.1:24783848-24783867 MS.gene44428:CDS 40.0%
! GATTGTGGTTTGTGGGTATT+TGG - chr8.1:24783856-24783875 MS.gene44428:CDS 40.0%
! TAAGCTTGCTCATTGTCACA+AGG + chr8.1:24784183-24784202 None:intergenic 40.0%
! TAGAGCATTCCTCCATTGAT+CGG - chr8.1:24784103-24784122 MS.gene44428:CDS 40.0%
! TCCTATGGATTGTGGTTTGT+GGG - chr8.1:24783849-24783868 MS.gene44428:CDS 40.0%
AAGAGAAACAACGATGGCAG+AGG - chr8.1:24783023-24783042 MS.gene44428:CDS 45.0%
ACCCACAAACCACAATCCAT+AGG + chr8.1:24783853-24783872 None:intergenic 45.0%
ACGATGATAAGCCCAAAGCA+GGG - chr8.1:24783699-24783718 MS.gene44428:CDS 45.0%
ACGGTGTATACATAGCCACT+TGG + chr8.1:24784146-24784165 None:intergenic 45.0%
ACTTCACCGGTAACCTTAAG+AGG + chr8.1:24783112-24783131 None:intergenic 45.0%
CAAATACCTTTGTCCCCTCT+TGG - chr8.1:24783482-24783501 MS.gene44428:CDS 45.0%
CAAGGGAGTGAAAGTAGAGA+CGG + chr8.1:24784165-24784184 None:intergenic 45.0%
CGCGTAAATTGGAACCAAGA+GGG + chr8.1:24783499-24783518 None:intergenic 45.0%
CGGTGTATACATAGCCACTT+GGG + chr8.1:24784145-24784164 None:intergenic 45.0%
CGTAGCTACTTGTATAAGGG+TGG + chr8.1:24783682-24783701 None:intergenic 45.0%
GCGTAAATTGGAACCAAGAG+GGG + chr8.1:24783498-24783517 None:intergenic 45.0%
GCTTCTATGTCTACAGAGAG+AGG + chr8.1:24783275-24783294 None:intergenic 45.0%
GTCAACCGATGATTACTTGG+TGG - chr8.1:24783550-24783569 MS.gene44428:CDS 45.0%
TACGATGATAAGCCCAAAGC+AGG - chr8.1:24783698-24783717 MS.gene44428:CDS 45.0%
TCGCGTAAATTGGAACCAAG+AGG + chr8.1:24783500-24783519 None:intergenic 45.0%
! AAAGCAGGGTGCCTCTATAA+TGG - chr8.1:24783713-24783732 MS.gene44428:CDS 45.0%
! AACAGATGGTGGTACTGGAT+TGG - chr8.1:24784053-24784072 MS.gene44428:CDS 45.0%
! AAGCAGGGTGCCTCTATAAT+GGG - chr8.1:24783714-24783733 MS.gene44428:CDS 45.0%
! AATTCTACGAGTGGGTGTTG+TGG + chr8.1:24783222-24783241 None:intergenic 45.0%
! AGAGCATTCCTCCATTGATC+GGG - chr8.1:24784104-24784123 MS.gene44428:CDS 45.0%
! ATTGGAACAGATGGTGGTAC+TGG - chr8.1:24784048-24784067 MS.gene44428:CDS 45.0%
! CACTGTGATCCTATGGATTG+TGG - chr8.1:24783841-24783860 MS.gene44428:CDS 45.0%
! GAGAGAGGAGTTTGATGATC+TGG + chr8.1:24783260-24783279 None:intergenic 45.0%
!! ATTATAGAGGCACCCTGCTT+TGG + chr8.1:24783714-24783733 None:intergenic 45.0%
!! TTATAGAGGCACCCTGCTTT+GGG + chr8.1:24783713-24783732 None:intergenic 45.0%
ACACGAATCCCGATCAATGG+AGG + chr8.1:24784115-24784134 None:intergenic 50.0%
ACCACACGAATCCCGATCAA+TGG + chr8.1:24784118-24784137 None:intergenic 50.0%
ATTGATCGGGATTCGTGTGG+TGG - chr8.1:24784117-24784136 MS.gene44428:CDS 50.0%
TCCATTGATCGGGATTCGTG+TGG - chr8.1:24784114-24784133 MS.gene44428:CDS 50.0%
TTGGAACCAAGAGGGGACAA+AGG + chr8.1:24783491-24783510 None:intergenic 50.0%
! AGCAGGGTGCCTCTATAATG+GGG - chr8.1:24783715-24783734 MS.gene44428:CDS 50.0%
AAGTGAAGCGGAAGCGGAAG+CGG + chr8.1:24783321-24783340 None:intergenic 55.0%
ACAACGATGGCAGAGGACGA+AGG - chr8.1:24783030-24783049 MS.gene44428:CDS 55.0%
! TCTACGAGTGGGTGTTGTGG+CGG + chr8.1:24783219-24783238 None:intergenic 55.0%
!! TTCGTGTGGTGGATCCCAAG+TGG - chr8.1:24784128-24784147 MS.gene44428:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 24783020 24784203 24783020 ID=MS.gene44428
chr8.1 mRNA 24783020 24784203 24783020 ID=MS.gene44428.t1;Parent=MS.gene44428
chr8.1 exon 24783468 24784203 24783468 ID=MS.gene44428.t1.exon1;Parent=MS.gene44428.t1
chr8.1 CDS 24783468 24784203 24783468 ID=cds.MS.gene44428.t1;Parent=MS.gene44428.t1
chr8.1 exon 24783020 24783387 24783020 ID=MS.gene44428.t1.exon2;Parent=MS.gene44428.t1
chr8.1 CDS 24783020 24783387 24783020 ID=cds.MS.gene44428.t1;Parent=MS.gene44428.t1
Gene Sequence

>MS.gene44428

ATGAAGAGAAACAACGATGGCAGAGGACGAAGGCACAGAAAGAAGAAGAATCCATTACTGTACCTACCTCATGAGTTGATAACTCAAATCCTCTTAAGGTTACCGGTGAAGTCCCTTATTCGTTTTAAATGCGTTTGTAAGTCTTGGTTTTCTGTTATCTCTGATCCTCATTTTACAAATTCACATTTTCAACTTACCGCCACAACACCCACTCGTAGAATTCTGTTCATATCACTTCCAGATCATCAAACTCCTCTCTCTGTAGACATAGAAGCATCGTTTCATGATGATTCTGCTTCCGCTTCCGCTTCCGCTTCACTTAATCTTGATTTTCTTCTTCCCAAATCTTATTATGATTTTGAAATTAAAGGTTCATGTAGAGGGTTTGTAGTTTTGCAGCACTATTATTATTATTATTCTTCAAAACTCTATCTATGGAATTCATCCACTGGACTTCACAAACAAATACCTTTGTCCCCTCTTGGTTCCAATTTACGCGACGAACATTTCTATGGTTTAGGGTATGATGAGTCAACCGATGATTACTTGGTGGTTTTAATGGCCTATTATTACAATACTGTGATCTCATATGATATTCCATCATACTTGGAGTTTTTCTCATTGCGAAACAATACATGGAAACAAATTAAGTGTACTCACCACCCTTATACAAGTAGCTACGATGATAAGCCCAAAGCAGGGTGCCTCTATAATGGGGCTATTCATTGGTTGGCTAGTAAGCTTGATATGTTATTGTTGCATTTGATTTTACCGAAAGGAATCTTTTAGATATACATTTCCCATATGATTATGTAGGTTTTCACTGTGATCCTATGGATTGTGGTTTGTGGGTATTTGGTGAATTTCTCAGTCTATGTGTTATGAATCATTATAATAGTACAGCTGAAATATGGGTGATGAAAGAATACAAAATCAATTCGTCTTGGACAAAGACTCTCATTCTTCCTGTTGATGACTTTCCCAATCAGTACTTTTTAGCATTGTGTTGTACAAAAAATGGTGATATTATTGGAACAGATGGTGGTACTGGATTGGTGAAGTATGATGACAATGGACAGTTGCTAGAGCATTCCTCCATTGATCGGGATTCGTGTGGTGGATCCCAAGTGGCTATGTATACACCGTCTCTACTTTCACTCCCTTGTGACAATGAGCAAGCTTAA

Protein sequence

>MS.gene44428.t1

MKRNNDGRGRRHRKKKNPLLYLPHELITQILLRLPVKSLIRFKCVCKSWFSVISDPHFTNSHFQLTATTPTRRILFISLPDHQTPLSVDIEASFHDDSASASASASLNLDFLLPKSYYDFEIKGSCRGFVVLQHYYYYYSSKLYLWNSSTGLHKQIPLSPLGSNLRDEHFYGLGYDESTDDYLVVLMAYYYNTVISYDIPSYLEFFSLRNNTWKQIKCTHHPYTSSYDDKPKAGCLYNGAIHWLASFHCDPMDCGLWVFGEFLSLCVMNHYNSTAEIWVMKEYKINSSWTKTLILPVDDFPNQYFLALCCTKNGDIIGTDGGTGLVKYDDNGQLLEHSSIDRDSCGGSQVAMYTPSLLSLPCDNEQA