AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene87554


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87554.t1 MTR_4g023120 87.027 370 41 2 1 363 1 370 0.0 664
MS.gene87554.t1 MTR_4g023070 86.721 369 42 2 1 362 1 369 0.0 657
MS.gene87554.t1 MTR_4g023090 63.564 376 117 7 3 363 16 386 2.59e-161 457
MS.gene87554.t1 MTR_4g021785 64.402 368 103 3 3 363 9 355 1.14e-160 454
MS.gene87554.t1 MTR_4g023080 64.481 366 103 3 3 362 9 353 7.61e-160 452
MS.gene87554.t1 MTR_4g023380 58.333 396 98 9 3 363 16 379 2.10e-137 396
MS.gene87554.t1 MTR_4g023130 57.104 366 89 4 3 362 9 312 2.31e-132 381
MS.gene87554.t1 MTR_4g023150 59.079 369 121 6 3 361 10 358 3.06e-131 380
MS.gene87554.t1 MTR_4g023200 58.310 355 118 6 17 361 24 358 1.06e-129 376
MS.gene87554.t1 MTR_4g023190 58.424 368 124 6 3 361 10 357 2.32e-127 370
MS.gene87554.t1 MTR_3g103020 55.526 380 129 11 3 363 20 378 5.01e-124 362
MS.gene87554.t1 MTR_4g023440 55.435 368 104 6 3 363 18 332 3.02e-121 353
MS.gene87554.t1 MTR_4g094365 51.989 377 145 9 3 363 8 364 3.11e-114 337
MS.gene87554.t1 MTR_4g109270 52.105 380 144 9 1 363 6 364 3.48e-113 334
MS.gene87554.t1 MTR_3g034130 54.144 362 129 8 3 343 9 354 4.72e-113 334
MS.gene87554.t1 MTR_4g116330 53.158 380 131 13 3 360 23 377 6.47e-113 334
MS.gene87554.t1 MTR_3g034180 51.823 384 145 10 3 363 123 489 1.01e-112 337
MS.gene87554.t1 MTR_4g109280 51.475 373 148 9 3 363 8 359 4.12e-109 323
MS.gene87554.t1 MTR_3g034160 52.105 380 144 9 3 360 9 372 1.64e-107 320
MS.gene87554.t1 MTR_4g117850 52.267 375 141 13 3 360 23 376 4.08e-106 316
MS.gene87554.t1 MTR_4g122850 52.957 372 134 13 14 363 12 364 1.21e-105 315
MS.gene87554.t1 MTR_4g117770 50.396 379 148 9 3 363 11 367 8.32e-105 313
MS.gene87554.t1 MTR_4g117810 50.396 379 148 9 3 363 11 367 8.32e-105 313
MS.gene87554.t1 MTR_4g117780 49.211 380 153 9 2 363 10 367 8.23e-104 310
MS.gene87554.t1 MTR_8g433040 49.602 377 144 10 3 363 18 364 1.26e-100 302
MS.gene87554.t1 MTR_8g032380 49.602 377 144 10 3 363 18 364 1.26e-100 302
MS.gene87554.t1 MTR_1g055135 47.815 389 149 14 3 363 13 375 1.29e-97 295
MS.gene87554.t1 MTR_6g060650 49.219 384 152 12 3 362 8 372 2.08e-95 289
MS.gene87554.t1 MTR_5g070080 46.310 393 156 11 3 360 10 382 2.65e-94 286
MS.gene87554.t1 MTR_5g097210 48.794 373 153 12 3 359 9 359 5.41e-94 285
MS.gene87554.t1 MTR_8g032390 49.062 373 131 13 3 358 40 370 1.79e-93 284
MS.gene87554.t1 MTR_5g070130 47.480 377 157 11 3 356 11 369 1.20e-91 280
MS.gene87554.t1 MTR_4g118380 48.509 369 138 10 3 338 8 357 7.73e-91 276
MS.gene87554.t1 MTR_5g070088 43.734 391 174 8 3 361 7 383 1.39e-90 277
MS.gene87554.t1 MTR_4g116330 47.230 379 116 13 3 360 23 338 5.83e-89 271
MS.gene87554.t1 MTR_4g117720 46.073 382 129 13 1 360 49 375 3.03e-86 266
MS.gene87554.t1 MTR_4g121580 46.859 382 137 14 3 362 11 348 2.30e-83 259
MS.gene87554.t1 MTR_8g433030 45.528 369 117 11 3 358 40 337 3.20e-82 254
MS.gene87554.t1 MTR_4g117750 45.195 385 155 11 1 359 1 355 3.23e-79 251
MS.gene87554.t1 MTR_4g117750 51.240 121 45 2 243 361 373 481 1.31e-26 110
MS.gene87554.t1 MTR_1g055165 42.318 371 142 10 3 363 10 318 4.60e-77 240
MS.gene87554.t1 MTR_8g013010 48.864 264 117 7 1 252 52 309 3.47e-71 225
MS.gene87554.t1 MTR_4g117870 46.535 303 111 11 67 363 10 267 3.32e-70 221
MS.gene87554.t1 MTR_1g055195 40.426 329 158 8 47 360 170 475 2.83e-61 204
MS.gene87554.t1 MTR_7g079370 39.773 352 167 12 32 356 16 349 1.20e-58 194
MS.gene87554.t1 MTR_4g116320 50.435 230 84 6 144 360 43 255 1.61e-57 188
MS.gene87554.t1 MTR_8g040935 51.675 209 75 6 169 363 12 208 6.53e-56 182
MS.gene87554.t1 MTR_2g048580 35.753 372 177 14 3 356 8 335 1.87e-54 182
MS.gene87554.t1 MTR_7g079400 40.067 297 139 11 87 363 60 337 2.14e-54 182
MS.gene87554.t1 MTR_4g118400 41.818 275 109 7 91 356 61 293 6.55e-54 179
MS.gene87554.t1 MTR_6g463430 50.732 205 73 6 170 363 15 202 2.93e-52 172
MS.gene87554.t1 MTR_8g102520 34.921 378 166 14 3 363 8 322 5.88e-49 167
MS.gene87554.t1 MTR_4g118370 39.474 266 102 10 113 360 33 257 2.98e-47 161
MS.gene87554.t1 MTR_4g116340 45.923 233 89 9 3 219 36 247 3.73e-46 158
MS.gene87554.t1 MTR_1g055250 39.592 245 111 8 136 363 46 270 3.66e-40 144
MS.gene87554.t1 MTR_4g114700 37.778 270 90 6 101 353 9 217 3.72e-39 139
MS.gene87554.t1 MTR_1g055175 41.743 218 91 7 163 362 1 200 1.42e-38 137
MS.gene87554.t1 MTR_7g117720 47.396 192 69 6 3 185 10 178 2.06e-38 139
MS.gene87554.t1 MTR_7g117720 49.074 108 37 3 255 356 175 270 1.47e-20 90.5
MS.gene87554.t1 MTR_1g094210 28.947 380 221 15 3 363 57 406 4.06e-38 141
MS.gene87554.t1 MTR_1g097490 31.507 365 215 13 3 355 49 390 1.68e-37 139
MS.gene87554.t1 MTR_4g117530 39.394 231 83 5 139 363 74 253 4.17e-37 134
MS.gene87554.t1 MTR_4g117430 51.020 147 56 4 112 251 14 151 4.21e-37 131
MS.gene87554.t1 MTR_1g094210 29.268 369 218 14 3 355 57 398 5.97e-37 138
MS.gene87554.t1 MTR_4g107820 30.519 308 182 9 2 291 35 328 5.41e-34 129
MS.gene87554.t1 MTR_4g107780 30.519 308 182 9 2 291 35 328 5.41e-34 129
MS.gene87554.t1 MTR_4g107780 30.519 308 182 9 2 291 35 328 7.57e-34 129
MS.gene87554.t1 MTR_4g107820 30.519 308 182 9 2 291 35 328 8.13e-34 129
MS.gene87554.t1 MTR_1g097560 29.235 366 218 13 3 355 36 373 1.92e-33 128
MS.gene87554.t1 MTR_7g079420 34.767 279 125 11 100 361 905 1143 3.41e-33 131
MS.gene87554.t1 MTR_1g097330 32.653 294 176 9 3 284 16 299 5.39e-32 124
MS.gene87554.t1 MTR_8g101580 28.415 366 235 11 2 355 44 394 8.07e-32 124
MS.gene87554.t1 MTR_2g055970 29.380 371 223 15 3 355 211 560 6.95e-31 123
MS.gene87554.t1 MTR_2g021150 29.819 332 198 15 3 316 14 328 7.49e-31 120
MS.gene87554.t1 MTR_3g009310 29.223 373 220 14 3 355 42 390 2.06e-30 120
MS.gene87554.t1 MTR_4g108820 32.759 290 144 13 3 283 42 289 2.10e-30 118
MS.gene87554.t1 MTR_8g467140 31.650 297 181 12 3 285 32 320 1.02e-29 117
MS.gene87554.t1 MTR_5g022420 31.186 295 173 13 3 285 27 303 1.03e-29 117
MS.gene87554.t1 MTR_4g023430 70.732 82 24 0 3 84 41 122 1.08e-29 114
MS.gene87554.t1 MTR_4g023430 45.865 133 43 3 236 363 114 222 1.33e-24 100
MS.gene87554.t1 MTR_2g046920 32.107 299 179 10 3 287 24 312 1.78e-29 117
MS.gene87554.t1 MTR_5g057790 32.132 333 185 16 3 318 46 354 3.35e-29 116
MS.gene87554.t1 MTR_5g023000 54.545 110 36 2 256 363 2 99 3.13e-28 106
MS.gene87554.t1 MTR_5g057710 32.440 336 181 18 3 318 46 355 3.18e-27 111
MS.gene87554.t1 MTR_4g055060 31.715 309 185 13 3 292 30 331 4.95e-27 110
MS.gene87554.t1 MTR_5g057690 31.915 329 181 15 3 313 46 349 3.17e-26 108
MS.gene87554.t1 MTR_4g118360 49.180 122 42 3 243 360 18 123 4.39e-26 101
MS.gene87554.t1 MTR_4g122860 37.624 202 74 8 176 363 157 320 5.83e-26 107
MS.gene87554.t1 MTR_4g122860 54.930 71 28 3 3 72 70 137 1.41e-11 65.5
MS.gene87554.t1 MTR_3g013740 31.152 382 215 19 3 355 44 406 5.99e-26 107
MS.gene87554.t1 MTR_4g133170 28.308 325 193 12 2 302 3 311 6.90e-26 107
MS.gene87554.t1 MTR_2g047832 27.794 349 200 13 3 316 29 360 9.55e-26 107
MS.gene87554.t1 MTR_5g069120 41.341 179 91 6 13 179 1 177 1.46e-25 101
MS.gene87554.t1 MTR_3g036430 27.838 370 203 15 3 355 20 342 3.68e-25 104
MS.gene87554.t1 MTR_7g062100 28.224 411 203 17 3 357 24 398 4.96e-25 105
MS.gene87554.t1 MTR_3g036290 28.455 369 214 15 3 355 22 356 6.04e-25 104
MS.gene87554.t1 MTR_2g046900 27.968 379 225 16 3 355 28 384 9.60e-25 104
MS.gene87554.t1 MTR_1g050542 25.683 366 240 13 3 355 58 404 1.15e-24 104
MS.gene87554.t1 MTR_3g007360 29.894 378 209 19 6 356 55 403 1.22e-24 104
MS.gene87554.t1 MTR_8g098830 37.374 198 90 9 171 354 35 212 1.64e-24 100
MS.gene87554.t1 MTR_6g027910 27.937 383 223 15 6 355 12 374 2.83e-24 102
MS.gene87554.t1 MTR_7g070830 27.100 369 200 12 3 316 21 375 4.47e-24 102
MS.gene87554.t1 MTR_3g010920 27.671 365 225 13 3 355 44 381 4.95e-24 102
MS.gene87554.t1 MTR_3g007330 30.435 299 170 12 3 282 48 327 4.99e-24 102
MS.gene87554.t1 MTR_4g013180 29.201 363 181 14 4 316 12 348 5.37e-24 103
MS.gene87554.t1 MTR_3g014540 28.796 382 216 20 3 358 29 380 5.57e-24 102
MS.gene87554.t1 MTR_6g065980 29.123 285 175 11 3 278 16 282 1.03e-23 100
MS.gene87554.t1 MTR_3g023930 27.540 374 210 15 3 355 34 367 1.49e-23 100
MS.gene87554.t1 MTR_3g010590 27.419 372 226 14 3 355 39 385 1.76e-23 100
MS.gene87554.t1 MTR_3g007410 29.024 379 211 18 6 356 55 403 1.85e-23 100
MS.gene87554.t1 MTR_7g070880 27.371 369 199 12 3 316 21 375 2.44e-23 100
MS.gene87554.t1 MTR_7g057270 28.809 361 194 15 3 316 26 370 2.51e-23 100
MS.gene87554.t1 MTR_7g079450 39.610 154 73 5 213 363 1 137 3.51e-23 94.0
MS.gene87554.t1 MTR_2g021155 29.167 312 194 14 6 299 39 341 3.76e-23 101
MS.gene87554.t1 MTR_0128s0020 29.867 375 190 17 3 330 18 366 4.27e-23 99.8
MS.gene87554.t1 MTR_2g078900 29.667 300 174 13 3 283 33 314 4.77e-23 99.0
MS.gene87554.t1 MTR_7g070440 27.950 322 173 11 5 287 9 310 4.78e-23 99.4
MS.gene87554.t1 MTR_3g013770 27.968 379 227 14 3 357 33 389 4.93e-23 99.4
MS.gene87554.t1 MTR_5g057020 32.237 304 166 16 3 292 46 323 5.20e-23 98.6
MS.gene87554.t1 MTR_4g109290 43.871 155 53 6 3 153 9 133 6.60e-23 95.1
MS.gene87554.t1 MTR_4g109290 62.264 53 18 1 313 363 136 188 8.19e-11 61.2
MS.gene87554.t1 MTR_4g061340 26.744 344 203 15 3 313 26 353 6.65e-23 99.0
MS.gene87554.t1 MTR_2g028130 28.657 335 196 13 2 298 4 333 9.15e-23 99.0
MS.gene87554.t1 MTR_4g129190 28.532 361 194 17 1 316 4 345 1.21e-22 98.2
MS.gene87554.t1 MTR_2g046800 30.357 336 175 17 3 292 14 336 1.23e-22 98.2
MS.gene87554.t1 MTR_5g011200 26.578 301 190 11 3 283 17 306 1.31e-22 98.2
MS.gene87554.t1 MTR_0044s0300 26.846 298 186 10 3 283 38 320 1.38e-22 98.2
MS.gene87554.t1 MTR_2g021190 28.032 371 230 14 3 355 21 372 1.69e-22 97.8
MS.gene87554.t1 MTR_2g046830 28.788 330 201 13 3 316 25 336 1.90e-22 97.8
MS.gene87554.t1 MTR_7g056760 26.343 391 241 14 3 355 23 404 2.32e-22 97.8
MS.gene87554.t1 MTR_3g006500 27.034 381 222 17 3 355 17 369 4.54e-22 96.3
MS.gene87554.t1 MTR_7g066000 29.032 310 180 13 3 278 25 328 5.54e-22 96.7
MS.gene87554.t1 MTR_1g054575 27.974 311 201 14 3 299 52 353 5.58e-22 97.8
MS.gene87554.t1 MTR_4g030830 26.062 353 210 12 3 316 9 349 5.96e-22 96.3
MS.gene87554.t1 MTR_3g010870 26.738 374 227 16 3 355 37 384 6.64e-22 96.3
MS.gene87554.t1 MTR_3g083640 26.471 374 228 18 3 355 55 402 7.12e-22 96.3
MS.gene87554.t1 MTR_2g028140 29.107 347 185 16 2 298 4 339 7.77e-22 96.3
MS.gene87554.t1 MTR_2g028160 28.779 344 188 15 2 299 4 336 1.03e-21 95.9
MS.gene87554.t1 MTR_2g461450 31.034 290 170 13 3 278 18 291 1.17e-21 95.1
MS.gene87554.t1 MTR_0667s0010 28.228 333 188 15 3 298 6 324 1.51e-21 95.5
MS.gene87554.t1 MTR_6g021880 27.797 295 180 10 14 283 31 317 1.54e-21 95.1
MS.gene87554.t1 MTR_3g006670 31.353 303 162 15 3 278 49 332 2.15e-21 95.1
MS.gene87554.t1 MTR_0760s0010 27.446 368 217 15 8 355 52 389 2.17e-21 94.7
MS.gene87554.t1 MTR_3g010520 27.078 373 214 13 3 355 25 359 2.19e-21 94.4
MS.gene87554.t1 MTR_5g008530 75.000 60 13 1 1 60 16 73 2.26e-21 87.0
MS.gene87554.t1 MTR_1g068835 27.714 350 214 12 2 332 3 332 3.00e-21 94.4
MS.gene87554.t1 MTR_3g030330 27.946 297 181 10 3 284 20 298 3.02e-21 94.0
MS.gene87554.t1 MTR_6g007135 28.042 378 233 17 3 355 26 389 6.91e-21 93.2
MS.gene87554.t1 MTR_6g016285 25.485 412 244 16 3 359 21 424 7.22e-21 93.6
MS.gene87554.t1 MTR_2g021050 26.455 378 218 15 2 359 4 341 7.49e-21 93.2
MS.gene87554.t1 MTR_6g004660 29.967 307 172 13 3 278 16 310 8.83e-21 92.8
MS.gene87554.t1 MTR_4g031770 27.181 298 189 12 3 283 4 290 8.90e-21 92.8
MS.gene87554.t1 MTR_3g030240 25.737 373 222 13 3 355 40 377 9.01e-21 92.8
MS.gene87554.t1 MTR_1g068875 28.882 322 188 12 2 298 3 308 9.72e-21 92.8
MS.gene87554.t1 MTR_3g014570 26.753 385 221 18 3 358 29 381 1.05e-20 92.8
MS.gene87554.t1 MTR_8g464770 24.930 357 212 11 3 330 12 341 1.15e-20 92.4
MS.gene87554.t1 MTR_2g104340 24.880 418 223 14 3 362 14 398 1.39e-20 92.4
MS.gene87554.t1 MTR_7g028660 27.492 331 196 11 3 299 11 331 2.00e-20 92.0
MS.gene87554.t1 MTR_2g024110 27.187 320 199 11 2 298 3 311 2.34e-20 91.7
MS.gene87554.t1 MTR_7g062060 26.667 405 230 19 3 356 12 400 2.49e-20 91.7
MS.gene87554.t1 MTR_3g010390 27.329 322 187 13 3 289 33 342 2.64e-20 91.7
MS.gene87554.t1 MTR_2g425980 28.655 342 184 14 2 298 4 330 3.09e-20 91.7
MS.gene87554.t1 MTR_1g115160 28.387 310 197 13 1 299 20 315 3.31e-20 91.3
MS.gene87554.t1 MTR_2g426090 28.783 337 177 14 6 297 9 327 3.84e-20 91.3
MS.gene87554.t1 MTR_3g030250 25.272 368 235 13 3 355 37 379 3.96e-20 90.9
MS.gene87554.t1 MTR_2g078850 27.577 359 213 15 6 341 33 367 4.12e-20 90.9
MS.gene87554.t1 MTR_2g426070 29.070 344 176 16 4 298 7 331 4.32e-20 91.3
MS.gene87554.t1 MTR_3g011060 27.778 360 205 14 3 330 28 364 4.66e-20 90.9
MS.gene87554.t1 MTR_7g407070 27.132 387 228 19 3 355 32 398 5.08e-20 90.9
MS.gene87554.t1 MTR_2g025420 28.324 346 187 16 3 298 6 340 5.64e-20 90.9
MS.gene87554.t1 MTR_3g010430 27.041 392 212 17 3 355 36 392 6.21e-20 90.9
MS.gene87554.t1 MTR_3g010620 25.658 304 183 12 1 286 31 309 6.54e-20 90.5
MS.gene87554.t1 MTR_1g068860 27.660 329 188 14 1 298 2 311 6.78e-20 90.1
MS.gene87554.t1 MTR_6g053240 26.866 335 188 14 2 308 27 332 7.75e-20 90.5
MS.gene87554.t1 MTR_7g445890 26.149 348 199 11 3 316 16 339 1.05e-19 89.7
MS.gene87554.t1 MTR_3g009240 28.920 287 183 8 3 278 36 312 1.17e-19 89.7
MS.gene87554.t1 MTR_3g006570 27.926 376 228 17 3 355 21 376 1.19e-19 89.7
MS.gene87554.t1 MTR_3g024110 28.620 297 189 10 3 289 101 384 1.40e-19 90.1
MS.gene87554.t1 MTR_5g069760 26.776 366 202 17 3 330 6 343 1.42e-19 89.4
MS.gene87554.t1 MTR_2g426060 28.402 338 187 15 3 298 6 330 1.52e-19 89.7
MS.gene87554.t1 MTR_3g007430 29.110 292 175 12 6 278 46 324 1.93e-19 89.0
MS.gene87554.t1 MTR_0128s0070 27.543 403 216 18 1 354 20 395 1.96e-19 89.4
MS.gene87554.t1 MTR_7g007300 27.273 297 180 11 3 283 103 379 2.04e-19 89.4
MS.gene87554.t1 MTR_5g056020 26.034 411 239 15 3 355 17 420 2.04e-19 89.7
MS.gene87554.t1 MTR_5g096710 27.481 393 232 15 3 357 23 400 2.47e-19 89.0
MS.gene87554.t1 MTR_4g024890 25.000 360 224 14 4 330 11 357 2.98e-19 88.6
MS.gene87554.t1 MTR_4g070550 28.000 325 169 14 2 278 4 311 3.08e-19 88.6
MS.gene87554.t1 MTR_7g060960 27.072 362 198 15 3 341 32 350 3.31e-19 88.2
MS.gene87554.t1 MTR_2g437110 26.433 314 182 11 3 280 22 322 3.44e-19 89.0
MS.gene87554.t1 MTR_7g066100 26.814 317 185 12 3 278 11 321 3.48e-19 88.6
MS.gene87554.t1 MTR_4g030090 28.205 312 176 13 4 278 15 315 3.74e-19 88.6
MS.gene87554.t1 MTR_5g027370 26.452 310 189 13 2 279 28 330 3.76e-19 88.6
MS.gene87554.t1 MTR_6g017280 26.198 313 185 11 3 280 9 310 4.06e-19 88.2
MS.gene87554.t1 MTR_5g027330 26.537 309 188 13 2 278 39 340 4.20e-19 88.6
MS.gene87554.t1 MTR_4g019990 26.479 355 204 14 3 316 6 344 4.41e-19 88.2
MS.gene87554.t1 MTR_7g061060 27.070 314 175 12 3 278 13 310 5.53e-19 87.8
MS.gene87554.t1 MTR_7g013590 27.676 383 221 16 6 358 39 395 6.07e-19 87.8
MS.gene87554.t1 MTR_7g050520 27.794 349 192 17 3 316 22 345 6.62e-19 87.4
MS.gene87554.t1 MTR_1g088120 26.171 363 202 14 6 318 13 359 6.77e-19 87.8
MS.gene87554.t1 MTR_3g023940 25.798 376 230 11 3 355 34 383 8.35e-19 87.0
MS.gene87554.t1 MTR_3g011020 26.963 382 209 15 3 354 28 369 9.24e-19 87.0
MS.gene87554.t1 MTR_2g029990 27.586 377 222 18 4 355 52 402 9.53e-19 87.4
MS.gene87554.t1 MTR_0097s0030 28.065 367 199 16 1 330 12 350 1.19e-18 86.7
MS.gene87554.t1 MTR_2g047240 28.065 367 199 16 1 330 12 350 1.19e-18 86.7
MS.gene87554.t1 MTR_7g055930 28.010 382 194 17 3 316 13 381 1.21e-18 87.0
MS.gene87554.t1 MTR_6g086920 25.285 439 239 18 1 355 36 469 1.31e-18 87.4
MS.gene87554.t1 MTR_6g034720 39.535 129 71 2 138 260 72 199 1.39e-18 84.0
MS.gene87554.t1 MTR_7g050480 27.794 349 192 18 3 316 22 345 1.44e-18 86.7
MS.gene87554.t1 MTR_5g046300 27.397 292 180 11 3 278 4 279 1.53e-18 86.3
MS.gene87554.t1 MTR_5g046290 27.397 292 180 11 3 278 4 279 1.53e-18 86.3
MS.gene87554.t1 MTR_8g099460 27.184 309 188 11 1 282 3 301 1.58e-18 86.7
MS.gene87554.t1 MTR_2g021770 27.184 412 224 20 6 360 15 407 2.10e-18 86.3
MS.gene87554.t1 MTR_0707s0020 26.121 379 199 14 1 302 24 398 2.18e-18 86.7
MS.gene87554.t1 MTR_6g053260 26.970 330 189 15 2 308 336 636 2.19e-18 87.0
MS.gene87554.t1 MTR_8g063330 27.864 323 182 14 3 282 14 328 2.26e-18 86.7
MS.gene87554.t1 MTR_4g117550 25.310 403 212 16 3 361 17 374 2.46e-18 85.9
MS.gene87554.t1 MTR_3g464470 26.425 386 222 17 3 342 7 376 2.50e-18 85.9
MS.gene87554.t1 MTR_2g021252 28.571 308 182 12 6 296 50 336 2.95e-18 85.5
MS.gene87554.t1 MTR_2g031720 26.718 393 231 16 3 363 6 373 3.15e-18 85.5
MS.gene87554.t1 MTR_7g055870 26.753 385 195 16 3 316 13 381 3.18e-18 85.9
MS.gene87554.t1 MTR_3g058470 24.929 353 180 13 2 323 36 334 3.33e-18 85.5
MS.gene87554.t1 MTR_7g066030 25.000 404 232 15 3 356 21 403 3.35e-18 85.5
MS.gene87554.t1 MTR_1g442850 27.841 352 191 15 5 316 7 335 3.93e-18 85.1
MS.gene87554.t1 MTR_4g030980 26.531 343 181 10 3 280 15 351 4.23e-18 85.5
MS.gene87554.t1 MTR_4g023100 43.478 115 58 2 255 363 6 119 4.38e-18 79.7
MS.gene87554.t1 MTR_4g030760 24.926 337 207 12 3 316 73 386 5.08e-18 85.1
MS.gene87554.t1 MTR_3g010970 28.912 294 170 13 6 283 51 321 5.10e-18 85.1
MS.gene87554.t1 MTR_5g069930 26.781 351 198 14 3 316 6 334 5.11e-18 84.7
MS.gene87554.t1 MTR_4g129160 28.177 362 197 17 3 313 7 356 5.48e-18 84.7
MS.gene87554.t1 MTR_3g464500 28.571 315 173 14 3 280 27 326 7.03e-18 84.7
MS.gene87554.t1 MTR_3g072470 27.320 388 201 17 3 336 19 379 7.45e-18 84.7
MS.gene87554.t1 MTR_7g056290 29.091 330 164 17 3 280 22 333 8.15e-18 84.7
MS.gene87554.t1 MTR_7g035295 27.097 310 162 9 3 278 16 295 9.40e-18 84.3
MS.gene87554.t1 MTR_7g078860 26.912 353 209 13 4 316 10 353 9.64e-18 84.3
MS.gene87554.t1 MTR_2g021800 24.396 414 236 15 3 356 16 412 1.08e-17 84.3
MS.gene87554.t1 MTR_2g024100 27.795 331 181 15 10 298 14 328 1.66e-17 83.6
MS.gene87554.t1 MTR_7g066840 25.989 354 199 13 3 316 23 353 1.88e-17 83.6
MS.gene87554.t1 MTR_5g046260 25.263 285 165 10 3 278 4 249 1.90e-17 82.0
MS.gene87554.t1 MTR_1g055070 27.612 268 158 12 3 241 49 309 1.95e-17 83.2
MS.gene87554.t1 MTR_6g090180 25.826 333 188 10 3 282 47 373 2.07e-17 83.6
MS.gene87554.t1 MTR_3g009260 28.276 290 178 10 3 278 41 314 2.14e-17 83.2
MS.gene87554.t1 MTR_3g436150 26.823 384 227 18 3 355 32 392 2.17e-17 83.2
MS.gene87554.t1 MTR_0129s0050 25.121 414 231 14 5 360 16 408 2.64e-17 83.2
MS.gene87554.t1 MTR_2g025960 31.064 235 122 11 98 298 5 233 2.97e-17 81.6
MS.gene87554.t1 MTR_3g036335 26.053 380 228 16 3 355 41 394 3.16e-17 82.8
MS.gene87554.t1 MTR_8g073550 33.500 200 102 9 3 185 30 215 3.86e-17 80.1
MS.gene87554.t1 MTR_7g061090 24.706 340 193 11 3 293 22 347 3.97e-17 82.4
MS.gene87554.t1 MTR_2g028110 27.356 329 185 13 2 297 3 310 3.99e-17 82.4
MS.gene87554.t1 MTR_0649s0020 27.451 408 210 20 3 355 11 387 4.26e-17 82.4
MS.gene87554.t1 MTR_7g066080 26.108 406 244 18 3 357 16 416 4.38e-17 82.4
MS.gene87554.t1 MTR_7g017130 27.103 321 189 12 2 282 17 332 4.54e-17 82.4
MS.gene87554.t1 MTR_7g017170 27.103 321 189 12 2 282 17 332 4.64e-17 82.4
MS.gene87554.t1 MTR_6g017270 30.846 201 115 6 3 185 9 203 4.99e-17 81.6
MS.gene87554.t1 MTR_7g016930 24.422 303 190 11 3 279 16 305 5.44e-17 81.3
MS.gene87554.t1 MTR_7g056503 26.221 389 239 17 3 355 21 397 5.83e-17 82.0
MS.gene87554.t1 MTR_3g024150 27.895 380 212 17 6 355 38 385 6.49e-17 81.6
MS.gene87554.t1 MTR_6g055210 25.735 408 238 16 3 355 22 419 9.45e-17 81.6
MS.gene87554.t1 MTR_0115s0020 24.765 319 191 11 2 278 9 320 1.03e-16 81.3
MS.gene87554.t1 MTR_5g057643 30.568 229 136 9 3 216 46 266 1.03e-16 79.7
MS.gene87554.t1 MTR_3g030350 26.649 379 229 17 3 355 35 390 1.08e-16 80.9
MS.gene87554.t1 MTR_5g022090 25.871 402 218 18 2 363 33 394 1.31e-16 80.9
MS.gene87554.t1 MTR_3g007270 27.129 317 186 14 3 288 47 349 1.46e-16 80.9
MS.gene87554.t1 MTR_2g031680 24.471 331 189 12 3 298 6 310 1.75e-16 80.5
MS.gene87554.t1 MTR_3g011100 26.943 386 230 17 3 355 235 601 1.76e-16 81.3
MS.gene87554.t1 MTR_7g052670 25.405 370 211 12 3 316 21 381 1.82e-16 80.9
MS.gene87554.t1 MTR_2g022000 24.205 409 234 16 3 352 16 407 1.95e-16 80.5
MS.gene87554.t1 MTR_7g060940 28.834 326 158 14 3 280 22 321 2.08e-16 80.1
MS.gene87554.t1 MTR_7g022600 25.606 371 208 13 1 316 21 378 2.22e-16 80.5
MS.gene87554.t1 MTR_1g061330 23.785 391 233 15 3 361 4 361 2.32e-16 80.1
MS.gene87554.t1 MTR_3g080370 25.935 401 233 15 17 363 35 425 2.45e-16 80.5
MS.gene87554.t1 MTR_7g077970 26.566 399 217 16 3 350 7 380 2.49e-16 80.1
MS.gene87554.t1 MTR_5g068040 26.433 314 167 11 3 280 16 301 2.99e-16 79.7
MS.gene87554.t1 MTR_7g056797 28.173 394 228 17 3 355 23 402 3.03e-16 79.7
MS.gene87554.t1 MTR_7g061050 25.231 325 190 10 3 291 13 320 3.08e-16 79.7
MS.gene87554.t1 MTR_3g024040 26.897 290 190 11 10 291 38 313 3.62e-16 79.3
MS.gene87554.t1 MTR_8g066440 24.934 377 221 15 4 331 24 387 3.87e-16 79.3
MS.gene87554.t1 MTR_5g072060 27.654 358 197 17 3 325 6 336 4.08e-16 80.1
MS.gene87554.t1 MTR_5g007610 27.742 310 180 12 3 282 41 336 4.93e-16 79.3
MS.gene87554.t1 MTR_1g054725 25.397 378 235 17 3 355 20 375 5.00e-16 79.0
MS.gene87554.t1 MTR_7g056003 31.269 323 154 16 6 280 18 320 5.42e-16 79.0
MS.gene87554.t1 MTR_1g055375 26.452 310 193 13 6 291 7 305 5.47e-16 79.0
MS.gene87554.t1 MTR_0831s0010 26.774 310 194 9 3 282 50 356 5.90e-16 79.0
MS.gene87554.t1 MTR_7g079640 26.440 382 219 17 3 351 13 365 6.43e-16 78.6
MS.gene87554.t1 MTR_1g056710 26.821 302 188 13 2 284 33 320 6.76e-16 78.6
MS.gene87554.t1 MTR_2g047200 26.075 372 207 16 3 330 20 367 8.81e-16 78.6
MS.gene87554.t1 MTR_0128s0010 26.276 392 239 14 3 357 21 399 1.01e-15 78.2
MS.gene87554.t1 MTR_3g011120 25.574 305 191 13 3 278 14 311 1.13e-15 77.8
MS.gene87554.t1 MTR_5g086590 29.557 203 117 9 107 291 9 203 1.92e-15 75.5
MS.gene87554.t1 MTR_7g055977 27.119 354 196 16 3 316 7 338 1.95e-15 77.4
MS.gene87554.t1 MTR_1g055145 48.352 91 40 3 13 99 43 130 1.96e-15 76.3
MS.gene87554.t1 MTR_1g055145 47.945 73 37 1 197 269 131 202 4.19e-12 66.2
MS.gene87554.t1 MTR_8g063440 26.433 314 190 14 3 282 12 318 2.39e-15 77.0
MS.gene87554.t1 MTR_2g047878 26.190 378 219 16 3 355 21 363 2.43e-15 77.0
MS.gene87554.t1 MTR_8g013005 60.345 58 21 1 307 362 1 58 2.62e-15 70.1
MS.gene87554.t1 MTR_7g067680 27.740 292 176 9 3 283 49 316 2.67e-15 77.0
MS.gene87554.t1 MTR_4g055820 25.305 328 194 11 3 282 14 338 2.71e-15 76.6
MS.gene87554.t1 MTR_0064s0160 24.495 396 235 18 3 340 42 431 2.74e-15 77.0
MS.gene87554.t1 MTR_3g058480 27.239 268 157 9 2 243 38 293 3.30e-15 76.3
MS.gene87554.t1 MTR_4g037465 27.487 382 212 18 3 342 21 379 3.67e-15 76.6
MS.gene87554.t1 MTR_7g056200 27.419 310 166 13 3 280 23 305 3.68e-15 76.3
MS.gene87554.t1 MTR_7g056170 23.377 385 181 11 3 316 75 416 4.15e-15 76.6
MS.gene87554.t1 MTR_4g031020 25.294 340 185 11 3 278 15 349 4.31e-15 76.6
MS.gene87554.t1 MTR_7g091640 27.245 323 173 15 3 280 35 340 5.37e-15 75.9
MS.gene87554.t1 MTR_2g047892 24.147 381 210 15 3 334 22 372 5.39e-15 75.9
MS.gene87554.t1 MTR_6g086825 27.164 335 180 16 3 282 70 395 5.83e-15 76.3
MS.gene87554.t1 MTR_6g013270 27.000 300 193 14 3 284 29 320 6.27e-15 75.9
MS.gene87554.t1 MTR_3g437520 25.118 422 223 17 3 347 23 428 6.53e-15 76.3
MS.gene87554.t1 MTR_7g077070 26.273 373 205 17 3 318 16 375 7.13e-15 75.9
MS.gene87554.t1 MTR_7g091630 25.275 364 202 17 3 316 32 375 1.04e-14 75.5
MS.gene87554.t1 MTR_6g017295 27.483 302 163 15 58 316 1 289 1.28e-14 75.5
MS.gene87554.t1 MTR_7g055987 28.105 306 169 16 6 280 23 308 1.28e-14 74.7
MS.gene87554.t1 MTR_4g028510 23.821 403 242 16 3 358 16 400 1.33e-14 75.1
MS.gene87554.t1 MTR_8g101940 25.723 346 186 13 3 302 2 322 1.84e-14 74.3
MS.gene87554.t1 MTR_0242s0060 29.091 330 166 16 3 280 9 322 1.85e-14 74.7
MS.gene87554.t1 MTR_0242s0040 29.091 330 166 16 3 280 9 322 1.85e-14 74.7
MS.gene87554.t1 MTR_7g078040 27.294 436 224 20 3 356 9 433 3.03e-14 73.9
MS.gene87554.t1 MTR_5g023570 40.741 108 54 3 3 107 37 137 3.09e-14 69.7
MS.gene87554.t1 MTR_4g030110 25.000 356 193 14 3 316 30 353 3.32e-14 73.6
MS.gene87554.t1 MTR_4g033495 25.926 324 184 13 3 285 27 335 3.59e-14 73.9
MS.gene87554.t1 MTR_5g057040 27.715 267 162 11 3 246 46 304 4.23e-14 74.3
MS.gene87554.t1 MTR_0129s0070 23.678 397 247 14 6 363 20 399 6.01e-14 72.8
MS.gene87554.t1 MTR_3g007300 27.248 367 204 15 3 355 49 366 7.18e-14 72.4
MS.gene87554.t1 MTR_4g028750 27.103 321 182 15 3 278 16 329 1.04e-13 72.0
MS.gene87554.t1 MTR_4g130330 23.704 405 238 15 3 358 7 389 1.11e-13 72.0
MS.gene87554.t1 MTR_2g006360 29.936 314 152 17 6 298 49 315 1.13e-13 72.0
MS.gene87554.t1 MTR_5g048160 24.375 320 196 14 2 278 3 319 1.23e-13 72.0
MS.gene87554.t1 MTR_7g066010 23.678 397 213 12 3 356 21 370 1.47e-13 71.6
MS.gene87554.t1 MTR_3g058440 29.915 234 124 12 2 208 34 254 1.49e-13 70.9
MS.gene87554.t1 MTR_5g069390 24.771 327 199 13 3 282 26 352 1.53e-13 72.0
MS.gene87554.t1 MTR_5g043160 25.806 341 173 12 5 280 52 377 1.57e-13 72.0
MS.gene87554.t1 MTR_2g010900 24.412 340 197 13 23 317 3 327 1.72e-13 71.2
MS.gene87554.t1 MTR_2g066200 24.127 315 193 14 3 278 12 319 1.85e-13 71.2
MS.gene87554.t1 MTR_7g050490 32.161 199 100 8 3 184 8 188 2.33e-13 68.6
MS.gene87554.t1 MTR_7g061010 27.864 323 173 14 3 287 22 322 2.53e-13 70.9
MS.gene87554.t1 MTR_1g112930 25.581 301 186 12 3 284 25 306 2.66e-13 70.9
MS.gene87554.t1 MTR_2g065860 25.321 312 193 13 3 278 12 319 2.74e-13 70.9
MS.gene87554.t1 MTR_3g010870 26.230 244 150 8 3 231 37 265 3.20e-13 70.1
MS.gene87554.t1 MTR_2g021210 26.460 291 191 10 3 283 84 361 3.58e-13 70.9
MS.gene87554.t1 MTR_5g010660 24.916 297 185 10 2 278 33 311 4.03e-13 70.5
MS.gene87554.t1 MTR_5g037680 23.367 398 236 16 3 355 8 381 5.67e-13 70.1
MS.gene87554.t1 MTR_0054s0100 26.032 315 186 10 11 278 25 339 6.20e-13 69.7
MS.gene87554.t1 MTR_1g007410 24.691 324 195 12 3 282 22 340 6.47e-13 69.7
MS.gene87554.t1 MTR_7g009265 27.273 275 147 12 86 316 15 280 6.47e-13 69.3
MS.gene87554.t1 MTR_7g056260 25.373 335 158 15 3 280 14 313 9.98e-13 68.6
MS.gene87554.t1 MTR_4g028660 23.077 403 238 15 3 356 16 395 1.09e-12 68.9
MS.gene87554.t1 MTR_4g027450 23.077 403 238 15 3 356 16 395 1.09e-12 68.9
MS.gene87554.t1 MTR_4g013175 25.946 370 204 12 6 316 13 371 1.12e-12 69.3
MS.gene87554.t1 MTR_7g055830 24.939 413 187 17 3 358 13 359 1.42e-12 68.6
MS.gene87554.t1 MTR_6g092560 24.074 378 238 16 3 341 12 379 1.49e-12 68.9
MS.gene87554.t1 MTR_2g104280 22.983 409 249 13 3 361 14 406 1.50e-12 68.6
MS.gene87554.t1 MTR_3g009300 24.390 369 207 15 6 355 37 352 1.60e-12 68.2
MS.gene87554.t1 MTR_4g006840 28.194 227 96 8 6 208 2 185 1.62e-12 66.6
MS.gene87554.t1 MTR_4g080200 35.119 168 80 7 1 156 1 151 1.84e-12 68.2
MS.gene87554.t1 MTR_2g021950 22.646 393 244 14 6 356 19 393 1.97e-12 68.2
MS.gene87554.t1 MTR_7g052150 25.215 349 206 15 3 314 22 352 2.19e-12 68.2
MS.gene87554.t1 MTR_1g114700 26.557 305 187 12 3 284 29 319 2.23e-12 68.2
MS.gene87554.t1 MTR_3g010440 25.667 300 151 9 3 292 26 263 2.25e-12 67.8
MS.gene87554.t1 MTR_7g056710 27.508 309 172 15 3 278 18 307 2.28e-12 68.2
MS.gene87554.t1 MTR_1g055200 55.000 60 26 1 97 156 5 63 2.57e-12 63.2
MS.gene87554.t1 MTR_4g028680 24.020 408 233 18 3 358 16 398 2.61e-12 67.8
MS.gene87554.t1 MTR_1g071010 24.845 322 186 14 4 285 16 321 4.62e-12 67.0
MS.gene87554.t1 MTR_5g024260 26.257 358 219 15 3 329 22 365 5.11e-12 67.0
MS.gene87554.t1 MTR_3g011650 29.358 218 126 8 6 209 82 285 6.15e-12 65.9
MS.gene87554.t1 MTR_2g078870 26.071 280 165 16 93 355 53 307 7.01e-12 65.9
MS.gene87554.t1 MTR_8g467670 24.606 317 178 14 3 278 14 310 7.39e-12 66.6
MS.gene87554.t1 MTR_4g013185 24.872 390 215 14 6 326 13 393 8.91e-12 66.2
MS.gene87554.t1 MTR_6g027890 31.176 170 100 5 138 297 112 274 1.25e-11 65.5
MS.gene87554.t1 MTR_8g046220 25.872 344 167 15 5 282 19 340 1.33e-11 65.9
MS.gene87554.t1 MTR_3g030310 24.286 350 196 16 3 316 21 337 1.50e-11 65.5
MS.gene87554.t1 MTR_6g034830 35.652 115 58 2 1 113 18 118 1.63e-11 61.2
MS.gene87554.t1 MTR_3g096250 27.891 294 151 14 3 283 47 292 2.00e-11 65.1
MS.gene87554.t1 MTR_2g031700 27.686 242 132 11 3 222 6 226 2.25e-11 64.3
MS.gene87554.t1 MTR_7g056820 24.868 378 223 17 3 342 7 361 2.26e-11 65.1
MS.gene87554.t1 MTR_1g112010 23.765 324 197 14 25 328 2 295 2.54e-11 64.3
MS.gene87554.t1 MTR_3g009250 29.358 218 129 8 3 208 41 245 3.34e-11 63.2
MS.gene87554.t1 MTR_5g037190 26.457 223 137 7 2 205 15 229 4.57e-11 62.8
MS.gene87554.t1 MTR_6g461660 25.625 320 194 15 3 281 19 335 4.78e-11 63.9
MS.gene87554.t1 MTR_5g059430 23.077 338 199 14 3 282 26 360 8.64e-11 63.5
MS.gene87554.t1 MTR_5g096910 22.727 264 162 9 114 358 151 391 8.81e-11 63.2
MS.gene87554.t1 MTR_6g079810 23.284 335 196 12 3 282 70 398 9.17e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87554.t1 AT4G12560 25.441 397 230 15 3 359 4 374 2.70e-23 100
MS.gene87554.t1 AT4G12560 25.441 397 230 15 3 359 4 374 2.70e-23 100
MS.gene87554.t1 AT4G12560 25.441 397 230 15 3 359 4 374 2.70e-23 100
MS.gene87554.t1 AT3G06240 27.778 378 196 15 3 328 36 388 1.61e-22 98.6
MS.gene87554.t1 AT3G16210 29.932 294 163 13 3 282 5 269 1.29e-20 92.0
MS.gene87554.t1 AT4G22390 26.462 325 203 14 2 299 3 318 3.40e-20 91.7
MS.gene87554.t1 AT4G22390 26.462 325 203 14 2 299 3 318 3.77e-20 91.3
MS.gene87554.t1 AT3G23880 27.575 301 188 12 2 283 13 302 6.53e-20 90.1
MS.gene87554.t1 AT1G11620 26.888 331 174 16 1 293 4 304 4.80e-16 79.0
MS.gene87554.t1 AT4G19940 23.647 351 205 11 2 316 34 357 1.05e-14 75.5
MS.gene87554.t1 AT3G21120 22.709 251 170 8 1 234 1 244 1.92e-14 74.3
MS.gene87554.t1 AT1G33530 26.562 320 188 14 1 299 95 388 2.85e-14 73.9
MS.gene87554.t1 AT3G16590 28.169 284 175 12 3 268 5 277 3.78e-14 73.6
MS.gene87554.t1 AT2G40925 23.824 319 185 12 2 284 26 322 1.54e-13 71.6
MS.gene87554.t1 AT3G21410 23.779 307 193 13 3 288 38 324 2.37e-13 71.2
MS.gene87554.t1 AT2G40910 22.078 308 203 9 2 282 61 358 4.89e-13 70.5
MS.gene87554.t1 AT1G47790 22.667 300 196 10 4 286 26 306 5.81e-13 70.1
MS.gene87554.t1 AT2G40910 22.078 308 203 9 2 282 68 365 6.41e-13 70.1
MS.gene87554.t1 AT3G17500 25.000 308 188 15 2 286 4 291 9.37e-13 69.3
MS.gene87554.t1 AT3G17540 25.087 287 184 11 2 269 9 283 9.51e-13 69.3
MS.gene87554.t1 AT3G08750 24.286 280 176 10 3 269 12 268 1.13e-12 68.9
MS.gene87554.t1 AT3G17500 25.000 308 188 15 2 286 3 290 1.97e-12 68.6
MS.gene87554.t1 AT5G62660 27.532 316 171 16 2 282 40 332 2.34e-12 68.2
MS.gene87554.t1 AT3G10430 28.814 236 136 13 3 223 5 223 2.37e-12 67.8
MS.gene87554.t1 AT1G19160 25.263 285 188 12 3 279 2 269 1.92e-11 65.1
MS.gene87554.t1 AT3G10240 24.055 291 186 11 3 277 27 298 1.98e-11 65.1
MS.gene87554.t1 AT3G17490 24.658 292 190 13 3 277 6 284 2.07e-11 65.1
MS.gene87554.t1 AT4G10190 24.407 295 199 13 1 280 7 292 3.81e-11 64.3
MS.gene87554.t1 AT3G17480 23.179 302 196 12 3 280 12 301 4.53e-11 63.9
MS.gene87554.t1 AT5G42460 24.597 248 165 7 2 232 6 248 5.03e-11 63.9

Find 66 sgRNAs with CRISPR-Local

Find 81 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGAACTGATTACATTTAT+TGG 0.095281 4.1:+75342733 None:intergenic
ACCGAAAATGGTGATATTAT+TGG 0.168379 4.1:-75342272 MS.gene87554:CDS
AAATCAATTGATCGAATTTC+AGG 0.224377 4.1:+75343013 None:intergenic
TCAAATTCTGTTGAGGTTAC+AGG 0.238787 4.1:-75343173 MS.gene87554:CDS
GATTCTGGTTTGTGGGTATT+TGG 0.239313 4.1:-75342482 MS.gene87554:CDS
TTGGAGAATTTCTCAGTATA+TGG 0.239627 4.1:-75342463 MS.gene87554:CDS
AAAGCGTATATTAATCTATA+TGG 0.257587 4.1:-75342803 MS.gene87554:CDS
TTTGACCATGCAATTGATTC+TGG 0.272648 4.1:-75342497 MS.gene87554:CDS
CCTATGCATTCTACCGAAAA+TGG 0.279950 4.1:-75342284 MS.gene87554:CDS
CTTCCTCAGCATGTCATTCC+TGG 0.289129 4.1:-75342356 MS.gene87554:CDS
TATATTAATCTATATGGTTT+TGG 0.298100 4.1:-75342797 MS.gene87554:CDS
CTAATGATACGATTGAAATA+TGG 0.302648 4.1:-75342427 MS.gene87554:CDS
TCAAATGCGTTTGTAAGTTA+TGG 0.325488 4.1:-75343132 MS.gene87554:CDS
GGTGATATTATTGGAAAATA+TGG 0.325508 4.1:-75342263 MS.gene87554:CDS
TATTGTTGGCTTTGATTTAA+CGG 0.336906 4.1:-75342555 MS.gene87554:CDS
GTGAAAGTAGTCCGCAAATC+TGG 0.357133 4.1:+75342307 None:intergenic
GTCATCCAAACATTTACATT+TGG 0.361833 4.1:-75342877 MS.gene87554:CDS
ACGTGGAAAGAAATCGATTA+TGG 0.371046 4.1:-75342662 MS.gene87554:CDS
GGATTCCAAATGTAAATGTT+TGG 0.401055 4.1:+75342872 None:intergenic
TGGTGTTCCTCAATCACATT+TGG 0.406622 4.1:-75342708 MS.gene87554:CDS
TGGAGAATTTCTCAGTATAT+GGG 0.411388 4.1:-75342462 MS.gene87554:CDS
ATATAGATTAATATACGCTT+TGG 0.416973 4.1:+75342805 None:intergenic
ATTTCTCAGTATATGGGTTA+AGG 0.418550 4.1:-75342456 MS.gene87554:CDS
ATAGCTTTGGATGTTATTGT+TGG 0.436202 4.1:-75342569 MS.gene87554:CDS
GAGTCGCTACTTTCACTCTC+TGG 0.439571 4.1:-75342149 MS.gene87554:CDS
AAATGTAATCAGTTCTTAGT+TGG 0.442543 4.1:-75342728 MS.gene87554:CDS
TGCAATTGATTCTGGTTTGT+GGG 0.454874 4.1:-75342489 MS.gene87554:CDS
ACATGACCCTTTGATTTCAA+AGG 0.460865 4.1:+75342922 None:intergenic
CATGACCCTTTGATTTCAAA+GGG 0.461447 4.1:+75342923 None:intergenic
TTTGCGTCGTGATATAGCTT+TGG 0.463623 4.1:-75342582 MS.gene87554:CDS
ATGCAATTGATTCTGGTTTG+TGG 0.475656 4.1:-75342490 MS.gene87554:CDS
TCAAAGGGAAAATAAGAGTC+TGG 0.478722 4.1:+75342938 None:intergenic
TAATGATACGATTGAAATAT+GGG 0.485063 4.1:-75342426 MS.gene87554:CDS
AATACAAAATGCATTCGTCT+TGG 0.493649 4.1:-75342394 MS.gene87554:CDS
CGATTATAGAGAAGGGGAAG+GGG 0.521099 4.1:-75342636 MS.gene87554:CDS
GGAAGGGAACAGTTAAAGTT+CGG 0.528741 4.1:+75342959 None:intergenic
TACATTTGGAATCCATCCAC+CGG 0.532440 4.1:-75342863 MS.gene87554:CDS
AAAATATGGTGGTACTAGAT+TGG 0.540379 4.1:-75342249 MS.gene87554:CDS
AAATCAAAGGGTCATGTAGA+GGG 0.545526 4.1:-75342916 MS.gene87554:CDS
AGGGAAAATAAGAGTCTGGA+AGG 0.546184 4.1:+75342942 None:intergenic
TGATCATTCAAATTCTGTTG+AGG 0.546882 4.1:-75343180 MS.gene87554:CDS
ATGGCGACGATTATAGAGAA+GGG 0.548373 4.1:-75342643 MS.gene87554:CDS
TCTGTACTATTCCAGATTTG+CGG 0.550677 4.1:-75342318 MS.gene87554:CDS
CTCTGAATACACGACAACTT+CGG 0.554316 4.1:+75342169 None:intergenic
TGGTCAAAATCACTTGGAAG+AGG 0.568189 4.1:+75342512 None:intergenic
ATTGCATGGTCAAAATCACT+TGG 0.570347 4.1:+75342506 None:intergenic
GAAATCAAAGGGTCATGTAG+AGG 0.571310 4.1:-75342917 MS.gene87554:CDS
TTCGGATGGACTGTTGCTGA+AGG 0.571451 4.1:+75342187 None:intergenic
ACGATTATAGAGAAGGGGAA+GGG 0.575034 4.1:-75342637 MS.gene87554:CDS
TATGGCGACGATTATAGAGA+AGG 0.578610 4.1:-75342644 MS.gene87554:CDS
GAATACACGACAACTTCGGA+TGG 0.585294 4.1:+75342173 None:intergenic
TTGGCTTTGATTTAACGGAA+AGG 0.585773 4.1:-75342550 MS.gene87554:CDS
ATTTGAATGATCAGTTCTTG+AGG 0.594660 4.1:+75343190 None:intergenic
GTCTAGAGATGATTATGTAG+TGG 0.597891 4.1:-75342765 MS.gene87554:CDS
CAAATCTGGAATAGTACAGA+GGG 0.610389 4.1:+75342321 None:intergenic
GCAAATCTGGAATAGTACAG+AGG 0.612314 4.1:+75342320 None:intergenic
GACGATTATAGAGAAGGGGA+AGG 0.629293 4.1:-75342638 MS.gene87554:CDS
AAATGTTGATTTGCAAAGTG+AGG 0.629728 4.1:+75343091 None:intergenic
TGACCAGGAATGACATGCTG+AGG 0.635899 4.1:+75342353 None:intergenic
TTGGTGAAGTATAATGACAA+AGG 0.639076 4.1:-75342230 MS.gene87554:CDS
GATATTATTGGAAAATATGG+TGG 0.639099 4.1:-75342260 MS.gene87554:CDS
TGGCGACGATTATAGAGAAG+GGG 0.641788 4.1:-75342642 MS.gene87554:CDS
ACAAACCAGAATCAATTGCA+TGG 0.654116 4.1:+75342492 None:intergenic
AGAGGGTTAAAGTAGTGACC+AGG 0.655673 4.1:+75342338 None:intergenic
GGGAAAATAAGAGTCTGGAA+GGG 0.662237 4.1:+75342943 None:intergenic
TCTCGTTTAGAGACAATACG+TGG 0.705506 4.1:-75342679 MS.gene87554:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTAATCTATATGGTTT+TGG - chr4.1:75342532-75342551 MS.gene87554:CDS 15.0%
!! AAAGCGTATATTAATCTATA+TGG - chr4.1:75342526-75342545 MS.gene87554:CDS 20.0%
!! ATATAGATTAATATACGCTT+TGG + chr4.1:75342527-75342546 None:intergenic 20.0%
!! TAAGAACTGATTACATTTAT+TGG + chr4.1:75342599-75342618 None:intergenic 20.0%
!! TAATGATACGATTGAAATAT+GGG - chr4.1:75342903-75342922 MS.gene87554:CDS 20.0%
! AAATCAATTGATCGAATTTC+AGG + chr4.1:75342319-75342338 None:intergenic 25.0%
! AAATGTAATCAGTTCTTAGT+TGG - chr4.1:75342601-75342620 MS.gene87554:CDS 25.0%
! CTAATGATACGATTGAAATA+TGG - chr4.1:75342902-75342921 MS.gene87554:CDS 25.0%
! GATATTATTGGAAAATATGG+TGG - chr4.1:75343069-75343088 MS.gene87554:CDS 25.0%
! GGTGATATTATTGGAAAATA+TGG - chr4.1:75343066-75343085 MS.gene87554:CDS 25.0%
!! TCCAATAATATCACCATTTT+CGG + chr4.1:75343061-75343080 None:intergenic 25.0%
!!! ATTTTCCCTTTGAAATCAAA+GGG - chr4.1:75342401-75342420 MS.gene87554:CDS 25.0%
!!! TATTGTTGGCTTTGATTTAA+CGG - chr4.1:75342774-75342793 MS.gene87554:CDS 25.0%
!!! TATTTTCCCTTTGAAATCAA+AGG - chr4.1:75342400-75342419 MS.gene87554:CDS 25.0%
AAAAACTCCAAATGTGATTG+AGG + chr4.1:75342631-75342650 None:intergenic 30.0%
AAAATATGGTGGTACTAGAT+TGG - chr4.1:75343080-75343099 MS.gene87554:CDS 30.0%
AATACAAAATGCATTCGTCT+TGG - chr4.1:75342935-75342954 MS.gene87554:CDS 30.0%
ACCGAAAATGGTGATATTAT+TGG - chr4.1:75343057-75343076 MS.gene87554:CDS 30.0%
ATTTGAATGATCAGTTCTTG+AGG + chr4.1:75342142-75342161 None:intergenic 30.0%
GGATTCCAAATGTAAATGTT+TGG + chr4.1:75342460-75342479 None:intergenic 30.0%
GTCATCCAAACATTTACATT+TGG - chr4.1:75342452-75342471 MS.gene87554:CDS 30.0%
TCAAATGCGTTTGTAAGTTA+TGG - chr4.1:75342197-75342216 MS.gene87554:CDS 30.0%
TGATCATTCAAATTCTGTTG+AGG - chr4.1:75342149-75342168 MS.gene87554:CDS 30.0%
TGGAGAATTTCTCAGTATAT+GGG - chr4.1:75342867-75342886 MS.gene87554:CDS 30.0%
TTGGAGAATTTCTCAGTATA+TGG - chr4.1:75342866-75342885 MS.gene87554:CDS 30.0%
TTGGTGAAGTATAATGACAA+AGG - chr4.1:75343099-75343118 MS.gene87554:CDS 30.0%
! AAGTATTTGTCTTTTCGATC+CGG + chr4.1:75342488-75342507 None:intergenic 30.0%
! AATGACAAAGGACAGTTTTT+AGG - chr4.1:75343111-75343130 MS.gene87554:CDS 30.0%
! ATGACAAAGGACAGTTTTTA+GGG - chr4.1:75343112-75343131 MS.gene87554:CDS 30.0%
! ATTTCTCAGTATATGGGTTA+AGG - chr4.1:75342873-75342892 MS.gene87554:CDS 30.0%
! TTTTTAATGGGGCTATTCAT+TGG - chr4.1:75342719-75342738 MS.gene87554:CDS 30.0%
!! AAATGTTGATTTGCAAAGTG+AGG + chr4.1:75342241-75342260 None:intergenic 30.0%
!! ATAGCTTTGGATGTTATTGT+TGG - chr4.1:75342760-75342779 MS.gene87554:CDS 30.0%
AAATCAAAGGGTCATGTAGA+GGG - chr4.1:75342413-75342432 MS.gene87554:CDS 35.0%
ACAAACCAGAATCAATTGCA+TGG + chr4.1:75342840-75342859 None:intergenic 35.0%
ACGTGGAAAGAAATCGATTA+TGG - chr4.1:75342667-75342686 MS.gene87554:CDS 35.0%
ATTGCATGGTCAAAATCACT+TGG + chr4.1:75342826-75342845 None:intergenic 35.0%
GTCTAGAGATGATTATGTAG+TGG - chr4.1:75342564-75342583 MS.gene87554:CDS 35.0%
TCAAAGGGAAAATAAGAGTC+TGG + chr4.1:75342394-75342413 None:intergenic 35.0%
TCAAATTCTGTTGAGGTTAC+AGG - chr4.1:75342156-75342175 MS.gene87554:CDS 35.0%
TCTGTACTATTCCAGATTTG+CGG - chr4.1:75343011-75343030 MS.gene87554:CDS 35.0%
! ACATGACCCTTTGATTTCAA+AGG + chr4.1:75342410-75342429 None:intergenic 35.0%
! CAAATCTGGAATAGTACAGA+GGG + chr4.1:75343011-75343030 None:intergenic 35.0%
! CATGACCCTTTGATTTCAAA+GGG + chr4.1:75342409-75342428 None:intergenic 35.0%
! CATTTTCGGTAGAATGCATA+GGG + chr4.1:75343047-75343066 None:intergenic 35.0%
! TTTGACCATGCAATTGATTC+TGG - chr4.1:75342832-75342851 MS.gene87554:CDS 35.0%
!! ATGCAATTGATTCTGGTTTG+TGG - chr4.1:75342839-75342858 MS.gene87554:CDS 35.0%
!! TGCAATTGATTCTGGTTTGT+GGG - chr4.1:75342840-75342859 MS.gene87554:CDS 35.0%
!! TTGGCTTTGATTTAACGGAA+AGG - chr4.1:75342779-75342798 MS.gene87554:CDS 35.0%
ACGATTATAGAGAAGGGGAA+GGG - chr4.1:75342692-75342711 MS.gene87554:CDS 40.0%
AGGGAAAATAAGAGTCTGGA+AGG + chr4.1:75342390-75342409 None:intergenic 40.0%
ATGGCGACGATTATAGAGAA+GGG - chr4.1:75342686-75342705 MS.gene87554:CDS 40.0%
CCTATGCATTCTACCGAAAA+TGG - chr4.1:75343045-75343064 MS.gene87554:CDS 40.0%
CTCTGAATACACGACAACTT+CGG + chr4.1:75343163-75343182 None:intergenic 40.0%
GAAATCAAAGGGTCATGTAG+AGG - chr4.1:75342412-75342431 MS.gene87554:CDS 40.0%
GGAAGGGAACAGTTAAAGTT+CGG + chr4.1:75342373-75342392 None:intergenic 40.0%
GGGAAAATAAGAGTCTGGAA+GGG + chr4.1:75342389-75342408 None:intergenic 40.0%
TATGGCGACGATTATAGAGA+AGG - chr4.1:75342685-75342704 MS.gene87554:CDS 40.0%
TCTCGTTTAGAGACAATACG+TGG - chr4.1:75342650-75342669 MS.gene87554:CDS 40.0%
TGGTCAAAATCACTTGGAAG+AGG + chr4.1:75342820-75342839 None:intergenic 40.0%
TGGTGTTCCTCAATCACATT+TGG - chr4.1:75342621-75342640 MS.gene87554:CDS 40.0%
TTTGCGTCGTGATATAGCTT+TGG - chr4.1:75342747-75342766 MS.gene87554:CDS 40.0%
! CCATTTTCGGTAGAATGCAT+AGG + chr4.1:75343048-75343067 None:intergenic 40.0%
! GCAAATCTGGAATAGTACAG+AGG + chr4.1:75343012-75343031 None:intergenic 40.0%
! TACATTTGGAATCCATCCAC+CGG - chr4.1:75342466-75342485 MS.gene87554:CDS 40.0%
! TATTTGTCTTTTCGATCCGG+TGG + chr4.1:75342485-75342504 None:intergenic 40.0%
!! GATTCTGGTTTGTGGGTATT+TGG - chr4.1:75342847-75342866 MS.gene87554:CDS 40.0%
AGAGGGTTAAAGTAGTGACC+AGG + chr4.1:75342994-75343013 None:intergenic 45.0%
CGATTATAGAGAAGGGGAAG+GGG - chr4.1:75342693-75342712 MS.gene87554:CDS 45.0%
GAATACACGACAACTTCGGA+TGG + chr4.1:75343159-75343178 None:intergenic 45.0%
GACGATTATAGAGAAGGGGA+AGG - chr4.1:75342691-75342710 MS.gene87554:CDS 45.0%
GTGAAAGTAGTCCGCAAATC+TGG + chr4.1:75343025-75343044 None:intergenic 45.0%
TGGCGACGATTATAGAGAAG+GGG - chr4.1:75342687-75342706 MS.gene87554:CDS 45.0%
!!! GGAAGGGGTGCTTTTTAATG+GGG - chr4.1:75342708-75342727 MS.gene87554:CDS 45.0%
!!! GGGAAGGGGTGCTTTTTAAT+GGG - chr4.1:75342707-75342726 MS.gene87554:CDS 45.0%
CTTCCTCAGCATGTCATTCC+TGG - chr4.1:75342973-75342992 MS.gene87554:CDS 50.0%
TGACCAGGAATGACATGCTG+AGG + chr4.1:75342979-75342998 None:intergenic 50.0%
! GAGTCGCTACTTTCACTCTC+TGG - chr4.1:75343180-75343199 MS.gene87554:CDS 50.0%
! TGTCTTTTCGATCCGGTGGA+TGG + chr4.1:75342481-75342500 None:intergenic 50.0%
!! TTCGGATGGACTGTTGCTGA+AGG + chr4.1:75343145-75343164 None:intergenic 50.0%
!!! GGGGAAGGGGTGCTTTTTAA+TGG - chr4.1:75342706-75342725 MS.gene87554:CDS 50.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 75342130 75343221 75342130 ID=MS.gene87554
chr4.1 mRNA 75342130 75343221 75342130 ID=MS.gene87554.t1;Parent=MS.gene87554
chr4.1 exon 75342130 75343221 75342130 ID=MS.gene87554.t1.exon1;Parent=MS.gene87554.t1
chr4.1 CDS 75342130 75343221 75342130 ID=cds.MS.gene87554.t1;Parent=MS.gene87554.t1
Gene Sequence

>MS.gene87554

ATGGATCTTCCTCAAGAACTGATCATTCAAATTCTGTTGAGGTTACAGGTGAAGTCTCTTATATTTTTCAAATGCGTTTGTAAGTTATGGTTCTCTCTTATCTCTGATCCTCACTTTGCAAATCAACATTTTCAACTTAACTTTGCAAAACACACTCGTAGATTTTTATGCATTTCAGCTCTATCTCCTGAAATTCGATCAATTGATTTCGATGCATTTCTTAACGATGCTTCTACTTCACCGAACTTTAACTGTTCCCTTCCAGACTCTTATTTTCCCTTTGAAATCAAAGGGTCATGTAGAGGGTTTATATTCTTGTATCGTCATCCAAACATTTACATTTGGAATCCATCCACCGGATCGAAAAGACAAATACTTATGTCTCATTTTAATTCCAAAGCGTATATTAATCTATATGGTTTTGGTTATGATCAGTCTAGAGATGATTATGTAGTGGTTTTATTGTCCAATAAATGTAATCAGTTCTTAGTTGGTGTTCCTCAATCACATTTGGAGTTTTTCTCGTTTAGAGACAATACGTGGAAAGAAATCGATTATGGCGACGATTATAGAGAAGGGGAAGGGGTGCTTTTTAATGGGGCTATTCATTGGTTGTCTTTGCGTCGTGATATAGCTTTGGATGTTATTGTTGGCTTTGATTTAACGGAAAGGAAATTGTTTGAGATGCCTCTTCCAAGTGATTTTGACCATGCAATTGATTCTGGTTTGTGGGTATTTGGAGAATTTCTCAGTATATGGGTTAAGGATACTGCTAATGATACGATTGAAATATGGGTGATGAAAGAATACAAAATGCATTCGTCTTGGACTAAGACTCTTGTTCTTCCTCAGCATGTCATTCCTGGTCACTACTTTAACCCTCTGTACTATTCCAGATTTGCGGACTACTTTCACCCTATGCATTCTACCGAAAATGGTGATATTATTGGAAAATATGGTGGTACTAGATTGGTGAAGTATAATGACAAAGGACAGTTTTTAGGGCATCACTCCTTCAGCAACAGTCCATCCGAAGTTGTCGTGTATTCAGAGTCGCTACTTTCACTCTCTGGTGACAATGAGCATGTTTAA

Protein sequence

>MS.gene87554.t1

MDLPQELIIQILLRLQVKSLIFFKCVCKLWFSLISDPHFANQHFQLNFAKHTRRFLCISALSPEIRSIDFDAFLNDASTSPNFNCSLPDSYFPFEIKGSCRGFIFLYRHPNIYIWNPSTGSKRQILMSHFNSKAYINLYGFGYDQSRDDYVVVLLSNKCNQFLVGVPQSHLEFFSFRDNTWKEIDYGDDYREGEGVLFNGAIHWLSLRRDIALDVIVGFDLTERKLFEMPLPSDFDHAIDSGLWVFGEFLSIWVKDTANDTIEIWVMKEYKMHSSWTKTLVLPQHVIPGHYFNPLYYSRFADYFHPMHSTENGDIIGKYGGTRLVKYNDKGQFLGHHSFSNSPSEVVVYSESLLSLSGDNEHV