AlfalfaGEDB | MS.gene58722

M. sativa cultivar XinJiangDaYe / MS.gene58722

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58722.t1	RHN63833.1	64.4	135	46	1	13	147	237	369	2.10E-38	168.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58722.t1	A0A396IGR6	64.4	135	46	1	13	147	237	369	1.5e-38	168.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene58722	MS.gene41046	PPI
MS.gene58722	MS.gene066639	PPI
MS.gene58722	MS.gene041491	PPI
MS.gene58722	MS.gene42447	PPI
MS.gene58722	MS.gene77856	PPI
MS.gene58722	MS.gene024979	PPI
MS.gene58722	MS.gene51189	PPI
MS.gene58722	MS.gene041475	PPI
MS.gene58722	MS.gene43789	PPI
MS.gene58722	MS.gene64203	PPI
MS.gene58722	MS.gene066622	PPI
MS.gene58722	MS.gene24826	PPI
MS.gene58722	MS.gene40904	PPI
MS.gene58722	MS.gene044425	PPI
MS.gene58722	MS.gene032970	PPI
MS.gene58722	MS.gene57537	PPI
MS.gene58722	MS.gene064104	PPI
MS.gene58722	MS.gene81242	PPI
MS.gene58722	MS.gene59637	PPI
MS.gene58722	MS.gene033426	PPI
MS.gene58722	MS.gene27022	PPI
MS.gene58722	MS.gene97996	PPI
MS.gene58722	MS.gene87585	PPI
MS.gene58722	MS.gene041390	PPI
MS.gene58722	MS.gene024009	PPI
MS.gene58722	MS.gene036599	PPI
MS.gene58722	MS.gene40887	PPI
MS.gene58722	MS.gene87200	PPI
MS.gene58722	MS.gene42444	PPI
MS.gene58722	MS.gene67687	PPI
MS.gene58722	MS.gene62398	PPI
MS.gene58722	MS.gene44892	PPI
MS.gene58722	MS.gene006705	PPI
MS.gene58722	MS.gene80884	PPI
MS.gene58722	MS.gene035237	PPI
MS.gene58722	MS.gene000036	PPI
MS.gene58722	MS.gene44886	PPI
MS.gene58722	MS.gene50309	PPI
MS.gene58722	MS.gene041394	PPI
MS.gene58722	MS.gene059156	PPI
MS.gene063414	MS.gene58722	PPI
MS.gene58722	MS.gene036664	PPI
MS.gene58722	MS.gene053257	PPI
MS.gene58722	MS.gene010758	PPI
MS.gene58722	MS.gene77858	PPI
MS.gene58722	MS.gene51201	PPI
MS.gene58722	MS.gene058696	PPI
MS.gene58722	MS.gene009893	PPI
MS.gene58722	MS.gene045475	PPI
MS.gene58722	MS.gene63655	PPI
MS.gene58722	MS.gene50336	PPI
MS.gene58722	MS.gene39262	PPI
MS.gene58722	MS.gene57526	PPI
MS.gene58722	MS.gene87586	PPI
MS.gene58722	MS.gene77704	PPI
MS.gene26957	MS.gene58722	PPI
MS.gene58722	MS.gene96126	PPI
MS.gene58722	MS.gene58320	PPI
MS.gene58722	MS.gene033083	PPI
MS.gene58722	MS.gene75875	PPI
MS.gene58781	MS.gene58722	PPI
MS.gene58722	MS.gene63658	PPI
MS.gene58722	MS.gene60027	PPI
MS.gene58722	MS.gene033081	PPI
MS.gene58722	MS.gene036663	PPI
MS.gene58722	MS.gene68580	PPI
MS.gene58722	MS.gene072177	PPI
MS.gene58722	MS.gene92376	PPI
MS.gene58722	MS.gene58781	PPI
MS.gene58722	MS.gene57525	PPI
MS.gene58722	MS.gene059157	PPI
MS.gene58722	MS.gene023996	PPI
MS.gene58722	MS.gene031591	PPI
MS.gene58722	MS.gene030114	PPI
MS.gene87569	MS.gene58722	PPI
MS.gene58722	MS.gene58716	PPI
MS.gene58722	MS.gene045473	PPI
MS.gene041491	MS.gene58722	PPI
MS.gene58722	MS.gene50301	PPI
MS.gene58722	MS.gene87569	PPI
MS.gene58722	MS.gene88774	PPI
MS.gene58722	MS.gene045474	PPI
MS.gene019504	MS.gene58722	PPI
MS.gene58722	MS.gene031590	PPI
MS.gene58722	MS.gene44883	PPI
MS.gene059096	MS.gene58722	PPI
MS.gene58722	MS.gene019504	PPI
MS.gene58722	MS.gene066623	PPI
MS.gene58722	MS.gene064108	PPI
MS.gene58722	MS.gene064090	PPI
MS.gene58722	MS.gene24208	PPI
MS.gene58722	MS.gene58317	PPI
MS.gene58722	MS.gene90742	PPI
MS.gene58722	MS.gene24212	PPI
MS.gene034690	MS.gene58722	PPI
MS.gene58722	MS.gene51191	PPI
MS.gene58722	MS.gene50332	PPI
MS.gene26949	MS.gene58722	PPI
MS.gene58722	MS.gene40902	PPI
MS.gene58722	MS.gene58240	PPI
MS.gene58722	MS.gene063472	PPI
MS.gene58722	MS.gene025887	PPI
MS.gene58722	MS.gene43790	PPI
MS.gene58722	MS.gene57717	PPI
MS.gene58722	MS.gene034680	PPI
MS.gene58722	MS.gene31587	PPI
MS.gene58722	MS.gene27021	PPI
MS.gene58722	MS.gene51208	PPI
MS.gene58722	MS.gene044563	PPI
MS.gene58722	MS.gene50327	PPI
MS.gene58722	MS.gene066626	PPI
MS.gene58722	MS.gene40982	PPI
MS.gene58722	MS.gene50339	PPI
MS.gene50298	MS.gene58722	PPI
MS.gene58722	MS.gene063474	PPI
MS.gene58722	MS.gene42452	PPI
MS.gene58722	MS.gene58785	PPI
MS.gene58722	MS.gene88416	PPI
MS.gene58722	MS.gene57530	PPI
MS.gene58722	MS.gene034681	PPI
MS.gene58722	MS.gene84698	PPI
MS.gene58722	MS.gene57532	PPI
MS.gene58722	MS.gene003076	PPI
MS.gene58722	MS.gene019506	PPI
MS.gene019506	MS.gene58722	PPI
MS.gene58722	MS.gene009892	PPI
MS.gene58722	MS.gene26101	PPI
MS.gene58722	MS.gene57535	PPI
MS.gene58722	MS.gene061241	PPI
MS.gene58722	MS.gene87559	PPI
MS.gene58722	MS.gene058669	PPI
MS.gene58722	MS.gene51192	PPI
MS.gene58722	MS.gene063826	PPI
MS.gene58722	MS.gene51188	PPI
MS.gene58722	MS.gene033875	PPI
MS.gene58722	MS.gene041489	PPI
MS.gene58722	MS.gene38220	PPI
MS.gene58722	MS.gene40986	PPI
MS.gene58722	MS.gene36704	PPI
MS.gene58722	MS.gene034688	PPI
MS.gene58722	MS.gene58239	PPI
MS.gene58722	MS.gene03060	PPI
MS.gene58722	MS.gene43796	PPI
MS.gene58722	MS.gene24213	PPI
MS.gene58722	MS.gene033440	PPI
MS.gene58722	MS.gene31637	PPI
MS.gene58722	MS.gene024011	PPI
MS.gene58722	MS.gene58241	PPI
MS.gene58722	MS.gene58313	PPI
MS.gene58722	MS.gene034677	PPI
MS.gene58722	MS.gene064109	PPI
MS.gene58722	MS.gene035238	PPI
MS.gene58722	MS.gene85043	PPI
MS.gene58722	MS.gene064114	PPI
MS.gene58722	MS.gene87584	PPI
MS.gene58722	MS.gene87563	PPI
MS.gene58722	MS.gene019505	PPI
MS.gene58722	MS.gene062698	PPI
MS.gene58722	MS.gene26829	PPI
MS.gene58722	MS.gene80610	PPI
MS.gene58722	MS.gene26949	PPI
MS.gene58722	MS.gene036557	PPI
MS.gene58722	MS.gene90743	PPI
MS.gene58722	MS.gene053256	PPI
MS.gene58722	MS.gene40886	PPI
MS.gene51202	MS.gene58722	PPI
MS.gene58722	MS.gene041391	PPI
MS.gene58722	MS.gene033443	PPI
MS.gene58722	MS.gene036583	PPI
MS.gene58722	MS.gene006711	PPI
MS.gene58722	MS.gene51202	PPI
MS.gene58722	MS.gene26957	PPI
MS.gene58722	MS.gene57536	PPI
MS.gene58722	MS.gene50307	PPI
MS.gene58722	MS.gene021553	PPI
MS.gene58722	MS.gene011106	PPI
MS.gene58722	MS.gene44887	PPI
MS.gene58722	MS.gene058701	PPI
MS.gene58722	MS.gene036558	PPI
MS.gene58722	MS.gene041474	PPI
MS.gene58722	MS.gene87554	PPI
MS.gene58722	MS.gene009891	PPI
MS.gene58722	MS.gene064083	PPI
MS.gene58722	MS.gene27051	PPI
MS.gene58722	MS.gene048193	PPI
MS.gene58722	MS.gene58312	PPI
MS.gene58722	MS.gene87562	PPI
MS.gene58722	MS.gene024420	PPI
MS.gene58722	MS.gene016220	PPI
MS.gene58722	MS.gene57533	PPI
MS.gene58722	MS.gene024008	PPI
MS.gene58722	MS.gene50337	PPI
MS.gene58722	MS.gene063670	PPI
MS.gene58722	MS.gene54541	PPI
MS.gene58722	MS.gene39265	PPI
MS.gene58722	MS.gene50306	PPI
MS.gene58722	MS.gene041393	PPI
MS.gene58722	MS.gene69309	PPI
MS.gene43796	MS.gene58722	PPI
MS.gene58722	MS.gene060368	PPI
MS.gene58722	MS.gene053299	PPI
MS.gene58722	MS.gene000035	PPI
MS.gene58722	MS.gene28758	PPI
MS.gene58722	MS.gene064111	PPI
MS.gene58722	MS.gene044429	PPI
MS.gene58722	MS.gene034690	PPI
MS.gene58722	MS.gene57531	PPI
MS.gene58722	MS.gene066620	PPI
MS.gene58722	MS.gene27284	PPI
MS.gene58722	MS.gene96448	PPI
MS.gene58722	MS.gene041388	PPI
MS.gene58722	MS.gene019503	PPI
MS.gene58313	MS.gene58722	PPI
MS.gene58722	MS.gene48221	PPI
MS.gene066622	MS.gene58722	PPI
MS.gene44883	MS.gene58722	PPI
MS.gene58722	MS.gene51204	PPI
MS.gene58722	MS.gene51190	PPI
MS.gene58722	MS.gene041470	PPI
MS.gene58722	MS.gene034762	PPI
MS.gene58722	MS.gene58319	PPI
MS.gene58722	MS.gene009883	PPI
MS.gene58722	MS.gene71159	PPI
MS.gene58722	MS.gene59943	PPI
MS.gene58722	MS.gene044426	PPI
MS.gene87588	MS.gene58722	PPI
MS.gene69309	MS.gene58722	PPI
MS.gene017412	MS.gene58722	PPI
MS.gene58722	MS.gene033441	PPI
MS.gene58722	MS.gene033442	PPI
MS.gene58722	MS.gene060366	PPI
MS.gene58722	MS.gene44428	PPI
MS.gene58722	MS.gene066120	PPI
MS.gene031591	MS.gene58722	PPI
MS.gene58722	MS.gene035235	PPI
MS.gene58722	MS.gene058703	PPI
MS.gene58722	MS.gene033432	PPI
MS.gene58722	MS.gene50329	PPI
MS.gene58722	MS.gene57528	PPI
MS.gene58722	MS.gene045476	PPI
MS.gene58722	MS.gene87588	PPI
MS.gene58722	MS.gene024000	PPI
MS.gene58722	MS.gene012215	PPI
MS.gene96126	MS.gene58722	PPI
MS.gene58722	MS.gene059096	PPI
MS.gene58722	MS.gene033079	PPI
MS.gene58722	MS.gene055694	PPI
MS.gene58722	MS.gene059101	PPI
MS.gene58722	MS.gene033444	PPI
MS.gene58722	MS.gene035236	PPI
MS.gene58722	MS.gene58316	PPI
MS.gene58722	MS.gene033430	PPI
MS.gene58722	MS.gene58321	PPI
MS.gene58722	MS.gene016524	PPI
MS.gene036557	MS.gene58722	PPI
MS.gene58722	MS.gene87564	PPI
MS.gene58722	MS.gene58315	PPI
MS.gene58722	MS.gene40984	PPI
MS.gene58722	MS.gene011679	PPI
MS.gene063826	MS.gene58722	PPI
MS.gene58722	MS.gene041473	PPI
MS.gene44892	MS.gene58722	PPI
MS.gene58722	MS.gene50311	PPI
MS.gene58722	MS.gene85454	PPI
MS.gene58722	MS.gene064112	PPI
MS.gene58722	MS.gene036556	PPI
MS.gene58722	MS.gene57538	PPI
MS.gene000038	MS.gene58722	PPI
MS.gene58722	MS.gene060367	PPI
MS.gene58722	MS.gene058693	PPI
MS.gene064111	MS.gene58722	PPI
MS.gene58722	MS.gene27319	PPI
MS.gene58722	MS.gene64001	PPI
MS.gene58722	MS.gene015089	PPI
MS.gene58722	MS.gene041395	PPI
MS.gene58722	MS.gene51200	PPI
MS.gene58722	MS.gene066641	PPI
MS.gene57535	MS.gene58722	PPI
MS.gene58722	MS.gene046958	PPI
MS.gene58722	MS.gene24286	PPI
MS.gene58722	MS.gene066635	PPI
MS.gene58722	MS.gene90744	PPI
MS.gene58722	MS.gene87573	PPI
MS.gene006710	MS.gene58722	PPI
MS.gene58722	MS.gene58783	PPI
MS.gene58722	MS.gene82082	PPI
MS.gene58722	MS.gene44885	PPI
MS.gene58722	MS.gene036760	PPI
MS.gene58722	MS.gene40988	PPI
MS.gene44885	MS.gene58722	PPI
MS.gene011679	MS.gene58722	PPI
MS.gene58722	MS.gene27283	PPI
MS.gene58722	MS.gene24173	PPI
MS.gene58722	MS.gene036584	PPI
MS.gene58722	MS.gene036662	PPI
MS.gene58722	MS.gene58311	PPI
MS.gene58722	MS.gene88776	PPI
MS.gene58722	MS.gene42451	PPI
MS.gene58722	MS.gene50304	PPI
MS.gene58722	MS.gene35068	PPI
MS.gene58722	MS.gene035261	PPI
MS.gene58722	MS.gene023999	PPI
MS.gene58722	MS.gene070461	PPI
MS.gene58722	MS.gene063414	PPI
MS.gene58722	MS.gene69307	PPI
MS.gene58722	MS.gene59639	PPI
MS.gene58722	MS.gene036581	PPI
MS.gene58722	MS.gene019507	PPI
MS.gene58722	MS.gene033431	PPI
MS.gene58722	MS.gene058692	PPI
MS.gene58722	MS.gene50320	PPI
MS.gene58722	MS.gene58314	PPI
MS.gene58722	MS.gene87557	PPI
MS.gene58722	MS.gene51199	PPI
MS.gene58722	MS.gene035263	PPI
MS.gene58722	MS.gene006710	PPI
MS.gene58722	MS.gene67501	PPI
MS.gene58722	MS.gene96406	PPI
MS.gene58722	MS.gene27285	PPI
MS.gene58722	MS.gene035262	PPI
MS.gene009883	MS.gene58722	PPI
MS.gene58722	MS.gene77857	PPI
MS.gene58722	MS.gene028390	PPI
MS.gene58722	MS.gene40878	PPI
MS.gene58722	MS.gene27020	PPI
MS.gene58722	MS.gene96407	PPI
MS.gene58722	MS.gene058694	PPI
MS.gene58722	MS.gene069075	PPI
MS.gene58722	MS.gene051820	PPI
MS.gene58722	MS.gene064091	PPI
MS.gene27020	MS.gene58722	PPI
MS.gene066620	MS.gene58722	PPI
MS.gene58722	MS.gene047279	PPI
MS.gene58722	MS.gene060370	PPI
MS.gene58722	MS.gene50305	PPI
MS.gene58722	MS.gene024002	PPI
MS.gene58722	MS.gene032969	PPI
MS.gene58722	MS.gene68890	PPI
MS.gene58722	MS.gene041392	PPI
MS.gene58722	MS.gene50297	PPI
MS.gene58722	MS.gene42445	PPI
MS.gene58722	MS.gene86273	PPI
MS.gene58722	MS.gene26830	PPI
MS.gene58722	MS.gene40985	PPI
MS.gene58722	MS.gene22715	PPI
MS.gene58722	MS.gene000038	PPI
MS.gene58722	MS.gene038756	PPI
MS.gene51204	MS.gene58722	PPI
MS.gene58722	MS.gene51207	PPI
MS.gene58722	MS.gene57529	PPI
MS.gene58722	MS.gene63657	PPI
MS.gene58722	MS.gene017412	PPI
MS.gene000035	MS.gene58722	PPI
MS.gene58722	MS.gene36595	PPI
MS.gene58722	MS.gene57527	PPI
MS.gene87573	MS.gene58722	PPI
MS.gene58722	MS.gene024004	PPI
MS.gene58722	MS.gene045140	PPI
MS.gene58722	MS.gene070462	PPI
MS.gene58722	MS.gene50298	PPI
MS.gene58722	MS.gene061240	PPI
MS.gene58722	MS.gene54049	PPI
MS.gene58722	MS.gene036582	PPI
MS.gene58722	MS.gene033427	PPI
MS.gene58722	MS.gene88780	PPI
MS.gene58722	MS.gene064086	PPI
MS.gene58722	MS.gene035234	PPI
MS.gene58722	MS.gene058989	PPI
MS.gene58722	MS.gene50326	PPI
MS.gene82082	MS.gene58722	PPI
MS.gene58722	MS.gene041468	PPI
MS.gene58722	MS.gene034686	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58722.t1	MTR_4g109270	62.963	135	48	1	13	147	232	364	1.72e-49	162
MS.gene58722.t1	MTR_8g433040	60.000	135	49	2	13	147	235	364	9.56e-45	150
MS.gene58722.t1	MTR_8g032380	60.000	135	49	2	13	147	235	364	9.56e-45	150
MS.gene58722.t1	MTR_3g103020	61.481	135	50	1	13	147	246	378	4.24e-44	149
MS.gene58722.t1	MTR_4g094365	57.664	137	53	2	13	147	231	364	1.52e-43	147
MS.gene58722.t1	MTR_4g116330	56.934	137	55	2	13	147	246	380	1.37e-42	145
MS.gene58722.t1	MTR_8g433030	60.305	131	46	3	13	142	212	337	1.41e-42	144
MS.gene58722.t1	MTR_8g032390	60.305	131	46	3	13	142	245	370	3.64e-42	144
MS.gene58722.t1	MTR_8g040935	57.037	135	54	2	15	147	76	208	4.51e-42	139
MS.gene58722.t1	MTR_4g109280	59.854	137	48	4	13	147	228	359	3.49e-41	141
MS.gene58722.t1	MTR_4g117780	62.281	114	41	1	34	147	256	367	5.23e-41	140
MS.gene58722.t1	MTR_4g117770	62.281	114	41	1	34	147	256	367	5.52e-41	140
MS.gene58722.t1	MTR_4g117810	62.281	114	41	1	34	147	256	367	5.52e-41	140
MS.gene58722.t1	MTR_4g116320	57.463	134	51	2	13	144	126	255	9.43e-41	137
MS.gene58722.t1	MTR_6g060650	56.716	134	54	2	13	146	243	372	1.48e-40	139
MS.gene58722.t1	MTR_4g117530	66.038	106	31	2	42	147	153	253	2.26e-40	136
MS.gene58722.t1	MTR_4g122850	56.835	139	54	4	13	149	232	366	2.11e-39	137
MS.gene58722.t1	MTR_4g023130	56.716	134	53	3	13	146	184	312	4.80e-39	134
MS.gene58722.t1	MTR_5g023000	65.000	100	33	2	48	147	2	99	1.65e-37	124
MS.gene58722.t1	MTR_4g023080	53.731	134	57	3	13	146	225	353	7.61e-37	129
MS.gene58722.t1	MTR_4g117850	57.480	127	51	2	15	140	249	373	9.90e-37	129
MS.gene58722.t1	MTR_4g117870	52.593	135	60	2	13	147	137	267	3.18e-36	125
MS.gene58722.t1	MTR_4g118370	52.273	132	57	2	13	144	132	257	3.47e-36	125
MS.gene58722.t1	MTR_4g117720	56.028	141	52	5	13	147	242	378	3.52e-36	128
MS.gene58722.t1	MTR_4g023380	49.405	168	52	6	9	147	216	379	4.66e-36	128
MS.gene58722.t1	MTR_3g034180	56.716	134	53	3	13	146	360	488	4.47e-35	127
MS.gene58722.t1	MTR_1g055175	50.746	134	61	3	15	147	72	201	6.08e-35	120
MS.gene58722.t1	MTR_1g055195	51.079	139	60	3	13	149	348	480	4.91e-34	124
MS.gene58722.t1	MTR_1g055165	52.593	135	57	4	15	147	189	318	9.54e-34	120
MS.gene58722.t1	MTR_4g117750	58.559	111	44	1	35	145	373	481	4.24e-33	122
MS.gene58722.t1	MTR_4g117750	54.464	112	45	2	35	146	253	358	1.01e-30	115
MS.gene58722.t1	MTR_5g097210	54.264	129	54	2	15	143	236	359	5.04e-33	120
MS.gene58722.t1	MTR_4g118360	57.391	115	41	3	35	147	18	126	7.86e-33	113
MS.gene58722.t1	MTR_4g023070	49.650	143	59	3	15	146	229	369	1.11e-32	119
MS.gene58722.t1	MTR_4g021785	49.630	135	63	3	13	147	226	355	1.63e-32	118
MS.gene58722.t1	MTR_4g023190	53.676	136	57	5	13	145	225	357	3.23e-32	117
MS.gene58722.t1	MTR_4g116330	56.522	115	46	2	35	147	229	341	3.67e-32	117
MS.gene58722.t1	MTR_6g463430	47.059	136	64	2	13	147	74	202	7.02e-32	113
MS.gene58722.t1	MTR_4g023090	48.299	147	58	4	13	145	240	382	8.51e-32	117
MS.gene58722.t1	MTR_4g118400	65.909	88	28	1	54	141	209	294	3.55e-31	113
MS.gene58722.t1	MTR_4g122860	50.000	128	59	3	22	147	196	320	5.07e-31	114
MS.gene58722.t1	MTR_3g034160	57.463	134	52	3	13	146	246	374	2.04e-30	113
MS.gene58722.t1	MTR_4g023120	48.611	144	61	4	15	147	229	370	3.54e-30	112
MS.gene58722.t1	MTR_5g070080	53.333	135	57	4	15	147	256	386	4.47e-30	112
MS.gene58722.t1	MTR_4g023150	51.471	136	60	5	13	145	226	358	6.49e-30	111
MS.gene58722.t1	MTR_4g023200	51.471	136	60	5	13	145	226	358	9.97e-30	111
MS.gene58722.t1	MTR_4g023440	59.184	98	36	2	50	147	239	332	2.01e-29	109
MS.gene58722.t1	MTR_5g070130	48.951	143	69	3	13	153	243	383	1.25e-28	108
MS.gene58722.t1	MTR_1g055135	46.429	140	65	4	13	147	241	375	1.47e-28	108
MS.gene58722.t1	MTR_4g118380	52.137	117	43	3	13	120	245	357	2.24e-28	107
MS.gene58722.t1	MTR_3g034130	52.101	119	53	2	15	133	248	362	7.95e-28	106
MS.gene58722.t1	MTR_7g079450	51.485	101	44	2	48	147	41	137	1.42e-26	97.4
MS.gene58722.t1	MTR_5g070088	48.092	131	65	2	13	142	252	380	5.64e-26	101
MS.gene58722.t1	MTR_8g102520	49.505	101	46	2	48	147	226	322	1.94e-23	93.6
MS.gene58722.t1	MTR_1g055250	47.107	121	55	5	15	134	141	253	3.98e-22	90.5
MS.gene58722.t1	MTR_4g114700	56.180	89	34	2	53	138	132	218	1.52e-21	87.4
MS.gene58722.t1	MTR_8g013005	71.186	59	17	0	89	147	1	59	1.71e-21	82.4
MS.gene58722.t1	MTR_7g079400	46.479	142	55	9	17	147	206	337	3.62e-20	85.1
MS.gene58722.t1	MTR_7g117720	58.889	90	31	4	58	143	186	273	9.38e-20	83.2
MS.gene58722.t1	MTR_4g122840	40.909	132	40	3	17	147	170	264	3.11e-19	81.6
MS.gene58722.t1	MTR_7g079370	52.688	93	39	2	50	141	262	350	2.42e-18	80.5
MS.gene58722.t1	MTR_4g121580	44.715	123	54	4	16	137	230	339	1.64e-17	78.2
MS.gene58722.t1	MTR_4g023430	39.860	143	64	5	15	147	92	222	2.60e-17	75.9
MS.gene58722.t1	MTR_8g098830	47.115	104	42	5	17	116	100	194	1.01e-16	74.3
MS.gene58722.t1	MTR_7g079420	40.580	138	66	6	17	147	1016	1144	7.45e-16	73.9
MS.gene58722.t1	MTR_2g048580	45.263	95	40	3	53	147	260	342	2.58e-14	68.9
MS.gene58722.t1	MTR_4g109290	66.038	53	18	0	95	147	136	188	3.77e-14	66.6
MS.gene58722.t1	MTR_4g023100	60.000	55	20	1	92	146	66	118	6.25e-12	59.3
MS.gene58722.t1	MTR_2g064960	69.048	42	13	0	106	147	18	59	6.69e-12	57.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 32 sgRNAs with CRISPR-Local

Find 37 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATTCTGGTTTGTGGGTATT+TGG	0.119331	8.1:+9884467	MS.gene58722:CDS
ATTCTGGTTTGTGGGTATTT+GGG	0.224908	8.1:+9884468	MS.gene58722:CDS
GACAATATACTTGACTATTC+TGG	0.288946	8.1:+9884452	MS.gene58722:CDS
ATAATCATACGGTTGAAATA+TGG	0.292170	8.1:+9884522	MS.gene58722:CDS
CTCATTAACATTGGCATCAA+TGG	0.363458	8.1:-9884597	None:intergenic
CCATACGGTTTGTGGGTTTG+TGG	0.390139	8.1:+9884386	MS.gene58722:CDS
ATTGGAACATGTGGTGGTAT+TGG	0.396640	8.1:+9884665	MS.gene58722:CDS
TACTTGACTATTCTGGTTTG+TGG	0.398497	8.1:+9884459	MS.gene58722:CDS
AATACAAATTGCATTCATCT+TGG	0.398909	8.1:+9884555	MS.gene58722:CDS
AAGTAAAACCATACGGTTTG+TGG	0.415808	8.1:+9884378	MS.gene58722:CDS
TAATCATACGGTTGAAATAT+GGG	0.438296	8.1:+9884523	MS.gene58722:CDS
AGTATATTGTCAAACTCATC+TGG	0.441674	8.1:-9884440	None:intergenic
ACTTGACTATTCTGGTTTGT+GGG	0.445951	8.1:+9884460	MS.gene58722:CDS
CATACGGTTTGTGGGTTTGT+GGG	0.446555	8.1:+9884387	MS.gene58722:CDS
TTCTGGTTTGTGGGTATTTG+GGG	0.446634	8.1:+9884469	MS.gene58722:CDS
TGTGGGTTTGTGGGTTAACA+AGG	0.452247	8.1:+9884396	MS.gene58722:CDS
GAGTCTCTGCTCTCACTCCC+TGG	0.513546	8.1:+9884776	MS.gene58722:CDS
GGGATTCACGTGAATCGTTA+CGG	0.517791	8.1:-9884736	None:intergenic
AGTAAAACCATACGGTTTGT+GGG	0.523582	8.1:+9884379	MS.gene58722:CDS
AACAAGCTTTAAGAAGAATG+AGG	0.543856	8.1:+9884807	MS.gene58722:CDS
CTCTGTATACATAGCCACTT+GGG	0.546267	8.1:-9884756	None:intergenic
AAAGCTTGTTCACTTTCACC+AGG	0.551123	8.1:-9884794	None:intergenic
CCACAAACCCACAAACCGTA+TGG	0.565600	8.1:-9884386	None:intergenic
AGAAAGAGACTCATTAACAT+TGG	0.571014	8.1:-9884606	None:intergenic
AACATGTGGTGGTATTGGAT+TGG	0.578026	8.1:+9884670	MS.gene58722:CDS
AAGCTTGTTCACTTTCACCA+GGG	0.600758	8.1:-9884793	None:intergenic
ACTCTGTATACATAGCCACT+TGG	0.613352	8.1:-9884757	None:intergenic
GGTGATATTATTGGAACATG+TGG	0.633288	8.1:+9884656	MS.gene58722:CDS
GATATTATTGGAACATGTGG+TGG	0.648140	8.1:+9884659	MS.gene58722:CDS
ACGATGCAAGTAAAACCATA+CGG	0.652244	8.1:+9884371	None:intergenic
TTGGTGAAGTACAATGACAA+AGG	0.668246	8.1:+9884689	MS.gene58722:CDS
CGATTCACGTGAATCCCAAG+TGG	0.676953	8.1:+9884742	MS.gene58722:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TAATAATTTTGATAATCATA+CGG	+	chr8.1:9884511-9884530	MS.gene58722:CDS	10.0%
!	AATACAAATTGCATTCATCT+TGG	+	chr8.1:9884555-9884574	MS.gene58722:CDS	25.0%
!	ATAATCATACGGTTGAAATA+TGG	+	chr8.1:9884522-9884541	MS.gene58722:CDS	25.0%
!	TAATCATACGGTTGAAATAT+GGG	+	chr8.1:9884523-9884542	MS.gene58722:CDS	25.0%
	AGAAAGAGACTCATTAACAT+TGG	-	chr8.1:9884609-9884628	None:intergenic	30.0%
	AGTATATTGTCAAACTCATC+TGG	-	chr8.1:9884443-9884462	None:intergenic	30.0%
	GACAATATACTTGACTATTC+TGG	+	chr8.1:9884452-9884471	MS.gene58722:CDS	30.0%
	GCAAAAAGTGGTGATATTAT+TGG	+	chr8.1:9884647-9884666	MS.gene58722:CDS	30.0%
!!	AACAAGCTTTAAGAAGAATG+AGG	+	chr8.1:9884807-9884826	MS.gene58722:CDS	30.0%
	AAGTAAAACCATACGGTTTG+TGG	+	chr8.1:9884378-9884397	MS.gene58722:CDS	35.0%
	AGTAAAACCATACGGTTTGT+GGG	+	chr8.1:9884379-9884398	MS.gene58722:CDS	35.0%
	CTCATTAACATTGGCATCAA+TGG	-	chr8.1:9884600-9884619	None:intergenic	35.0%
	GATATTATTGGAACATGTGG+TGG	+	chr8.1:9884659-9884678	MS.gene58722:CDS	35.0%
	GGTGATATTATTGGAACATG+TGG	+	chr8.1:9884656-9884675	MS.gene58722:CDS	35.0%
	TTGGTGAAGTACAATGACAA+AGG	+	chr8.1:9884689-9884708	MS.gene58722:CDS	35.0%
!!	ACTTGACTATTCTGGTTTGT+GGG	+	chr8.1:9884460-9884479	MS.gene58722:CDS	35.0%
!!	ATTCTGGTTTGTGGGTATTT+GGG	+	chr8.1:9884468-9884487	MS.gene58722:CDS	35.0%
!!	TACTTGACTATTCTGGTTTG+TGG	+	chr8.1:9884459-9884478	MS.gene58722:CDS	35.0%
!!	TATTCTGGTTTGTGGGTATT+TGG	+	chr8.1:9884467-9884486	MS.gene58722:CDS	35.0%
	ACTCTGTATACATAGCCACT+TGG	-	chr8.1:9884760-9884779	None:intergenic	40.0%
	ATTGGAACATGTGGTGGTAT+TGG	+	chr8.1:9884665-9884684	MS.gene58722:CDS	40.0%
	CTCTGTATACATAGCCACTT+GGG	-	chr8.1:9884759-9884778	None:intergenic	40.0%
!	AAAGCTTGTTCACTTTCACC+AGG	-	chr8.1:9884797-9884816	None:intergenic	40.0%
!	AACATGTGGTGGTATTGGAT+TGG	+	chr8.1:9884670-9884689	MS.gene58722:CDS	40.0%
!	AAGCTTGTTCACTTTCACCA+GGG	-	chr8.1:9884796-9884815	None:intergenic	40.0%
!	ACTTTTTGCACAGCACAATG+GGG	-	chr8.1:9884636-9884655	None:intergenic	40.0%
!!	CACTTTTTGCACAGCACAAT+GGG	-	chr8.1:9884637-9884656	None:intergenic	40.0%
!!	TTCTGGTTTGTGGGTATTTG+GGG	+	chr8.1:9884469-9884488	MS.gene58722:CDS	40.0%
	CATACGGTTTGTGGGTTTGT+GGG	+	chr8.1:9884387-9884406	MS.gene58722:CDS	45.0%
	CCATTGTGCTGTGCAAAAAG+TGG	+	chr8.1:9884635-9884654	MS.gene58722:CDS	45.0%
	GGGATTCACGTGAATCGTTA+CGG	-	chr8.1:9884739-9884758	None:intergenic	45.0%
!	TGTGGGTTTGTGGGTTAACA+AGG	+	chr8.1:9884396-9884415	MS.gene58722:CDS	45.0%
!!!	CCACTTTTTGCACAGCACAA+TGG	-	chr8.1:9884638-9884657	None:intergenic	45.0%
	CCACAAACCCACAAACCGTA+TGG	-	chr8.1:9884389-9884408	None:intergenic	50.0%
	CCATACGGTTTGTGGGTTTG+TGG	+	chr8.1:9884386-9884405	MS.gene58722:CDS	50.0%
	CGATTCACGTGAATCCCAAG+TGG	+	chr8.1:9884742-9884761	MS.gene58722:CDS	50.0%
	GAGTCTCTGCTCTCACTCCC+TGG	+	chr8.1:9884776-9884795	MS.gene58722:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	9884374	9884835	9884374	ID=MS.gene58722
chr8.1	mRNA	9884374	9884835	9884374	ID=MS.gene58722.t1;Parent=MS.gene58722
chr8.1	exon	9884374	9884835	9884374	ID=MS.gene58722.t1.exon1;Parent=MS.gene58722.t1
chr8.1	CDS	9884374	9884835	9884374	ID=cds.MS.gene58722.t1;Parent=MS.gene58722.t1

Gene Sequence

>MS.gene58722

ATGCAAGTAAAACCATACGGTTTGTGGGTTTGTGGGTTAACAAGGAAACTTTGCAATATGTATTTGCCAGATGAGTTTGACAATATACTTGACTATTCTGGTTTGTGGGTATTTGGGGAATTTCTCAGTTTTTCGTCTAATAATTTTGATAATCATACGGTTGAAATATGGGTGATGAAAGAATACAAATTGCATTCATCTTGGACAAAGACTCATGTTCTGTCCATTGATGCCAATGTTAATGAGTCTCTTTCTTTTTCCCCATTGTGCTGTGCAAAAAGTGGTGATATTATTGGAACATGTGGTGGTATTGGATTGGTGAAGTACAATGACAAAGGACAGCTACTAGAGCATTGCTCTTACCGTAACGATTCACGTGAATCCCAAGTGGCTATGTATACAGAGTCTCTGCTCTCACTCCCTGGTGAAAGTGAACAAGCTTTAAGAAGAATGAGGTTGTGA

Protein sequence

>MS.gene58722.t1

MQVKPYGLWVCGLTRKLCNMYLPDEFDNILDYSGLWVFGEFLSFSSNNFDNHTVEIWVMKEYKLHSSWTKTHVLSIDANVNESLSFSPLCCAKSGDIIGTCGGIGLVKYNDKGQLLEHCSYRNDSRESQVAMYTESLLSLPGESEQALRRMRL