AlfalfaGEDB | MS.gene038756

M. sativa cultivar XinJiangDaYe / MS.gene038756

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene038756.t1	RHN63833.1	97.1	208	6	0	1	208	162	369	1.50E-116	428.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene038756.t1	A0A396IGR6	97.1	208	6	0	1	208	162	369	1.1e-116	428.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene44883	MS.gene038756	PPI
MS.gene038756	MS.gene063474	PPI
MS.gene038756	MS.gene51190	PPI
MS.gene038756	MS.gene58319	PPI
MS.gene038756	MS.gene044426	PPI
MS.gene038756	MS.gene034681	PPI
MS.gene036583	MS.gene038756	PPI
MS.gene88780	MS.gene038756	PPI
MS.gene41046	MS.gene038756	PPI
MS.gene87588	MS.gene038756	PPI
MS.gene017412	MS.gene038756	PPI
MS.gene038756	MS.gene57532	PPI
MS.gene038756	MS.gene033442	PPI
MS.gene80884	MS.gene038756	PPI
MS.gene51192	MS.gene038756	PPI
MS.gene009883	MS.gene038756	PPI
MS.gene038756	MS.gene44428	PPI
MS.gene044563	MS.gene038756	PPI
MS.gene038756	MS.gene058669	PPI
MS.gene069075	MS.gene038756	PPI
MS.gene038756	MS.gene066120	PPI
MS.gene033427	MS.gene038756	PPI
MS.gene038756	MS.gene035235	PPI
MS.gene40985	MS.gene038756	PPI
MS.gene031591	MS.gene038756	PPI
MS.gene041474	MS.gene038756	PPI
MS.gene038756	MS.gene041489	PPI
MS.gene038756	MS.gene024000	PPI
MS.gene038756	MS.gene034688	PPI
MS.gene041388	MS.gene038756	PPI
MS.gene038756	MS.gene24213	PPI
MS.gene062698	MS.gene038756	PPI
MS.gene57536	MS.gene038756	PPI
MS.gene96126	MS.gene038756	PPI
MS.gene019503	MS.gene038756	PPI
MS.gene51208	MS.gene038756	PPI
MS.gene038756	MS.gene033079	PPI
MS.gene038756	MS.gene034677	PPI
MS.gene016524	MS.gene038756	PPI
MS.gene038756	MS.gene055694	PPI
MS.gene038756	MS.gene059101	PPI
MS.gene50304	MS.gene038756	PPI
MS.gene038756	MS.gene035238	PPI
MS.gene038756	MS.gene58316	PPI
MS.gene038756	MS.gene033430	PPI
MS.gene038756	MS.gene064114	PPI
MS.gene038756	MS.gene87584	PPI
MS.gene90744	MS.gene038756	PPI
MS.gene51204	MS.gene038756	PPI
MS.gene038756	MS.gene58315	PPI
MS.gene31587	MS.gene038756	PPI
MS.gene036557	MS.gene038756	PPI
MS.gene041393	MS.gene038756	PPI
MS.gene033441	MS.gene038756	PPI
MS.gene038756	MS.gene80610	PPI
MS.gene038756	MS.gene90743	PPI
MS.gene063826	MS.gene038756	PPI
MS.gene84698	MS.gene038756	PPI
MS.gene038756	MS.gene85454	PPI
MS.gene038756	MS.gene064112	PPI
MS.gene038756	MS.gene036556	PPI
MS.gene58239	MS.gene038756	PPI
MS.gene066641	MS.gene038756	PPI
MS.gene82082	MS.gene038756	PPI
MS.gene038756	MS.gene060367	PPI
MS.gene038756	MS.gene27319	PPI
MS.gene000038	MS.gene038756	PPI
MS.gene57531	MS.gene038756	PPI
MS.gene038756	MS.gene57536	PPI
MS.gene038756	MS.gene51200	PPI
MS.gene39262	MS.gene038756	PPI
MS.gene57535	MS.gene038756	PPI
MS.gene025887	MS.gene038756	PPI
MS.gene041470	MS.gene038756	PPI
MS.gene058694	MS.gene038756	PPI
MS.gene038756	MS.gene064083	PPI
MS.gene038756	MS.gene58783	PPI
MS.gene015089	MS.gene038756	PPI
MS.gene038756	MS.gene024420	PPI
MS.gene038756	MS.gene024008	PPI
MS.gene038756	MS.gene50337	PPI
MS.gene038756	MS.gene54541	PPI
MS.gene038756	MS.gene39265	PPI
MS.gene44885	MS.gene038756	PPI
MS.gene038756	MS.gene036584	PPI
MS.gene011679	MS.gene038756	PPI
MS.gene038756	MS.gene036662	PPI
MS.gene060370	MS.gene038756	PPI
MS.gene038756	MS.gene060368	PPI
MS.gene64001	MS.gene038756	PPI
MS.gene038756	MS.gene053299	PPI
MS.gene038756	MS.gene28758	PPI
MS.gene57533	MS.gene038756	PPI
MS.gene038756	MS.gene044429	PPI
MS.gene038756	MS.gene42451	PPI
MS.gene032970	MS.gene038756	PPI
MS.gene87586	MS.gene038756	PPI
MS.gene038756	MS.gene69307	PPI
MS.gene40887	MS.gene038756	PPI
MS.gene50339	MS.gene038756	PPI
MS.gene038756	MS.gene019507	PPI
MS.gene038756	MS.gene033431	PPI
MS.gene060366	MS.gene038756	PPI
MS.gene038756	MS.gene034762	PPI
MS.gene038756	MS.gene59943	PPI
MS.gene038756	MS.gene58314	PPI
MS.gene57529	MS.gene038756	PPI
MS.gene038756	MS.gene67501	PPI
MS.gene038756	MS.gene96406	PPI
MS.gene038756	MS.gene035262	PPI
MS.gene038756	MS.gene028390	PPI
MS.gene038756	MS.gene40878	PPI
MS.gene40902	MS.gene038756	PPI
MS.gene038756	MS.gene96407	PPI
MS.gene033875	MS.gene038756	PPI
MS.gene038756	MS.gene058703	PPI
MS.gene27020	MS.gene038756	PPI
MS.gene066620	MS.gene038756	PPI
MS.gene035236	MS.gene038756	PPI
MS.gene038756	MS.gene060370	PPI
MS.gene038756	MS.gene024002	PPI
MS.gene038756	MS.gene012215	PPI
MS.gene038756	MS.gene032969	PPI
MS.gene038756	MS.gene50297	PPI
MS.gene58781	MS.gene038756	PPI
MS.gene038756	MS.gene42445	PPI
MS.gene011106	MS.gene038756	PPI
MS.gene62398	MS.gene038756	PPI
MS.gene60027	MS.gene038756	PPI
MS.gene038756	MS.gene26830	PPI
MS.gene038756	MS.gene22715	PPI
MS.gene045475	MS.gene038756	PPI
MS.gene88776	MS.gene038756	PPI
MS.gene038756	MS.gene51207	PPI
MS.gene038756	MS.gene58321	PPI
MS.gene35068	MS.gene038756	PPI
MS.gene041390	MS.gene038756	PPI
MS.gene92376	MS.gene038756	PPI
MS.gene038756	MS.gene87564	PPI
MS.gene038756	MS.gene36595	PPI
MS.gene000035	MS.gene038756	PPI
MS.gene50329	MS.gene038756	PPI
MS.gene038756	MS.gene024004	PPI
MS.gene038756	MS.gene045140	PPI
MS.gene31637	MS.gene038756	PPI
MS.gene87573	MS.gene038756	PPI
MS.gene038756	MS.gene061240	PPI
MS.gene57537	MS.gene038756	PPI
MS.gene019504	MS.gene038756	PPI
MS.gene038756	MS.gene041473	PPI
MS.gene059156	MS.gene038756	PPI
MS.gene038756	MS.gene50311	PPI
MS.gene038756	MS.gene035234	PPI
MS.gene038756	MS.gene058989	PPI
MS.gene038756	MS.gene57538	PPI
MS.gene038756	MS.gene041468	PPI
MS.gene58716	MS.gene038756	PPI
MS.gene038756	MS.gene058693	PPI
MS.gene033444	MS.gene038756	PPI
MS.gene50306	MS.gene038756	PPI
MS.gene038756	MS.gene041395	PPI
MS.gene038756	MS.gene42447	PPI
MS.gene038756	MS.gene51189	PPI
MS.gene066639	MS.gene038756	PPI
MS.gene26949	MS.gene038756	PPI
MS.gene038756	MS.gene046958	PPI
MS.gene036760	MS.gene038756	PPI
MS.gene038756	MS.gene24286	PPI
MS.gene87200	MS.gene038756	PPI
MS.gene58311	MS.gene038756	PPI
MS.gene038756	MS.gene044425	PPI
MS.gene033432	MS.gene038756	PPI
MS.gene038756	MS.gene40988	PPI
MS.gene59639	MS.gene038756	PPI
MS.gene038756	MS.gene59637	PPI
MS.gene038756	MS.gene24173	PPI
MS.gene066635	MS.gene038756	PPI
MS.gene038756	MS.gene27022	PPI
MS.gene010758	MS.gene038756	PPI
MS.gene063670	MS.gene038756	PPI
MS.gene038756	MS.gene035261	PPI
MS.gene038756	MS.gene87585	PPI
MS.gene038756	MS.gene023999	PPI
MS.gene019506	MS.gene038756	PPI
MS.gene50326	MS.gene038756	PPI
MS.gene51200	MS.gene038756	PPI
MS.gene038756	MS.gene036581	PPI
MS.gene038756	MS.gene035237	PPI
MS.gene024002	MS.gene038756	PPI
MS.gene88774	MS.gene038756	PPI
MS.gene038756	MS.gene000036	PPI
MS.gene038756	MS.gene50320	PPI
MS.gene034686	MS.gene038756	PPI
MS.gene038756	MS.gene87557	PPI
MS.gene42452	MS.gene038756	PPI
MS.gene038756	MS.gene51199	PPI
MS.gene038756	MS.gene035263	PPI
MS.gene063414	MS.gene038756	PPI
MS.gene038756	MS.gene27285	PPI
MS.gene038756	MS.gene053257	PPI
MS.gene038756	MS.gene77858	PPI
MS.gene038756	MS.gene51201	PPI
MS.gene038756	MS.gene009893	PPI
MS.gene038756	MS.gene50336	PPI
MS.gene87563	MS.gene038756	PPI
MS.gene57526	MS.gene038756	PPI
MS.gene038756	MS.gene77704	PPI
MS.gene021553	MS.gene038756	PPI
MS.gene051820	MS.gene038756	PPI
MS.gene26957	MS.gene038756	PPI
MS.gene97996	MS.gene038756	PPI
MS.gene036582	MS.gene038756	PPI
MS.gene27021	MS.gene038756	PPI
MS.gene038756	MS.gene047279	PPI
MS.gene58320	MS.gene038756	PPI
MS.gene038756	MS.gene50305	PPI
MS.gene81242	MS.gene038756	PPI
MS.gene26101	MS.gene038756	PPI
MS.gene27283	MS.gene038756	PPI
MS.gene64203	MS.gene038756	PPI
MS.gene038756	MS.gene68890	PPI
MS.gene42444	MS.gene038756	PPI
MS.gene038756	MS.gene86273	PPI
MS.gene038756	MS.gene036663	PPI
MS.gene038756	MS.gene68580	PPI
MS.gene44886	MS.gene038756	PPI
MS.gene038756	MS.gene40985	PPI
MS.gene87562	MS.gene038756	PPI
MS.gene40904	MS.gene038756	PPI
MS.gene038756	MS.gene63657	PPI
MS.gene038756	MS.gene059157	PPI
MS.gene038756	MS.gene023996	PPI
MS.gene038756	MS.gene030114	PPI
MS.gene038756	MS.gene045473	PPI
MS.gene87569	MS.gene038756	PPI
MS.gene038756	MS.gene50301	PPI
MS.gene038756	MS.gene070462	PPI
MS.gene038756	MS.gene88774	PPI
MS.gene041491	MS.gene038756	PPI
MS.gene038756	MS.gene031590	PPI
MS.gene059096	MS.gene038756	PPI
MS.gene57528	MS.gene038756	PPI
MS.gene038756	MS.gene066623	PPI
MS.gene50297	MS.gene038756	PPI
MS.gene038756	MS.gene064086	PPI
MS.gene038756	MS.gene064090	PPI
MS.gene006711	MS.gene038756	PPI
MS.gene038756	MS.gene58317	PPI
MS.gene27285	MS.gene038756	PPI
MS.gene064091	MS.gene038756	PPI
MS.gene019505	MS.gene038756	PPI
MS.gene064112	MS.gene038756	PPI
MS.gene038756	MS.gene90742	PPI
MS.gene045476	MS.gene038756	PPI
MS.gene58785	MS.gene038756	PPI
MS.gene24208	MS.gene038756	PPI
MS.gene038756	MS.gene24212	PPI
MS.gene038756	MS.gene066639	PPI
MS.gene038756	MS.gene50332	PPI
MS.gene50307	MS.gene038756	PPI
MS.gene038756	MS.gene024979	PPI
MS.gene034690	MS.gene038756	PPI
MS.gene96407	MS.gene038756	PPI
MS.gene038756	MS.gene24826	PPI
MS.gene77857	MS.gene038756	PPI
MS.gene038756	MS.gene063472	PPI
MS.gene038756	MS.gene43790	PPI
MS.gene57527	MS.gene038756	PPI
MS.gene51191	MS.gene038756	PPI
MS.gene033426	MS.gene038756	PPI
MS.gene038756	MS.gene40982	PPI
MS.gene033430	MS.gene038756	PPI
MS.gene50298	MS.gene038756	PPI
MS.gene67687	MS.gene038756	PPI
MS.gene038756	MS.gene88416	PPI
MS.gene038756	MS.gene57530	PPI
MS.gene038756	MS.gene003076	PPI
MS.gene038756	MS.gene024009	PPI
MS.gene038756	MS.gene036599	PPI
MS.gene038756	MS.gene40887	PPI
MS.gene71159	MS.gene038756	PPI
MS.gene96448	MS.gene038756	PPI
MS.gene038756	MS.gene009892	PPI
MS.gene058692	MS.gene038756	PPI
MS.gene041392	MS.gene038756	PPI
MS.gene038756	MS.gene006705	PPI
MS.gene038756	MS.gene061241	PPI
MS.gene69309	MS.gene038756	PPI
MS.gene038756	MS.gene51192	PPI
MS.gene63658	MS.gene038756	PPI
MS.gene033081	MS.gene038756	PPI
MS.gene038756	MS.gene51188	PPI
MS.gene038756	MS.gene033875	PPI
MS.gene038756	MS.gene38220	PPI
MS.gene038756	MS.gene40986	PPI
MS.gene038756	MS.gene50309	PPI
MS.gene40982	MS.gene038756	PPI
MS.gene038756	MS.gene041394	PPI
MS.gene070461	MS.gene038756	PPI
MS.gene51199	MS.gene038756	PPI
MS.gene038756	MS.gene03060	PPI
MS.gene038756	MS.gene033440	PPI
MS.gene038756	MS.gene036664	PPI
MS.gene038756	MS.gene024011	PPI
MS.gene038756	MS.gene58241	PPI
MS.gene038756	MS.gene064109	PPI
MS.gene038756	MS.gene058696	PPI
MS.gene87559	MS.gene038756	PPI
MS.gene038756	MS.gene85043	PPI
MS.gene038756	MS.gene062698	PPI
MS.gene041475	MS.gene038756	PPI
MS.gene038756	MS.gene033083	PPI
MS.gene060367	MS.gene038756	PPI
MS.gene038756	MS.gene40886	PPI
MS.gene44892	MS.gene038756	PPI
MS.gene51202	MS.gene038756	PPI
MS.gene038756	MS.gene041391	PPI
MS.gene038756	MS.gene033443	PPI
MS.gene038756	MS.gene57525	PPI
MS.gene064111	MS.gene038756	PPI
MS.gene26829	MS.gene038756	PPI
MS.gene064104	MS.gene038756	PPI
MS.gene053256	MS.gene038756	PPI
MS.gene038756	MS.gene045474	PPI
MS.gene75875	MS.gene038756	PPI
MS.gene038756	MS.gene058701	PPI
MS.gene038756	MS.gene036558	PPI
MS.gene038756	MS.gene87554	PPI
MS.gene038756	MS.gene009891	PPI
MS.gene54049	MS.gene038756	PPI
MS.gene038756	MS.gene27051	PPI
MS.gene43789	MS.gene038756	PPI
MS.gene038756	MS.gene40984	PPI
MS.gene038756	MS.gene064108	PPI
MS.gene038756	MS.gene048193	PPI
MS.gene006710	MS.gene038756	PPI
MS.gene038756	MS.gene016220	PPI
MS.gene038756	MS.gene24208	PPI
MS.gene072177	MS.gene038756	PPI
MS.gene58722	MS.gene038756	PPI
MS.gene43796	MS.gene038756	PPI
MS.gene58312	MS.gene038756	PPI
MS.gene36704	MS.gene038756	PPI
MS.gene038756	MS.gene58240	PPI
MS.gene038756	MS.gene27284	PPI
MS.gene77856	MS.gene038756	PPI
MS.gene038756	MS.gene57717	PPI
MS.gene038756	MS.gene034680	PPI
MS.gene58313	MS.gene038756	PPI
MS.gene038756	MS.gene48221	PPI
MS.gene038756	MS.gene044563	PPI
MS.gene038756	MS.gene50327	PPI
MS.gene038756	MS.gene066626	PPI
MS.gene066622	MS.gene038756	PPI
MS.gene44887	MS.gene038756	PPI
MS.gene63655	MS.gene038756	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene038756.t1	MTR_3g103020	62.069	203	72	3	7	208	180	378	3.69e-80	244
MS.gene038756.t1	MTR_4g117720	62.201	209	66	7	6	208	177	378	2.27e-78	239
MS.gene038756.t1	MTR_6g060650	61.500	200	69	4	8	207	181	372	2.89e-76	234
MS.gene038756.t1	MTR_4g109270	58.654	208	77	4	1	208	166	364	7.27e-73	225
MS.gene038756.t1	MTR_4g109280	61.500	200	67	6	11	208	168	359	8.63e-73	224
MS.gene038756.t1	MTR_8g040935	55.924	211	87	3	1	208	1	208	6.91e-68	207
MS.gene038756.t1	MTR_3g034180	58.824	204	74	5	8	207	291	488	3.76e-67	214
MS.gene038756.t1	MTR_4g117850	58.163	196	77	4	8	201	181	373	5.70e-66	207
MS.gene038756.t1	MTR_4g122850	55.288	208	85	7	4	208	162	364	8.34e-66	207
MS.gene038756.t1	MTR_4g117770	58.621	203	76	4	9	208	170	367	1.13e-62	199
MS.gene038756.t1	MTR_4g117810	58.621	203	76	4	9	208	170	367	1.13e-62	199
MS.gene038756.t1	MTR_4g023130	55.340	206	83	5	2	207	116	312	1.68e-62	197
MS.gene038756.t1	MTR_3g034130	56.345	197	76	5	3	194	171	362	1.73e-62	198
MS.gene038756.t1	MTR_4g116330	55.556	198	80	4	13	208	189	380	2.98e-62	198
MS.gene038756.t1	MTR_4g116320	55.000	200	80	5	8	205	64	255	4.29e-62	194
MS.gene038756.t1	MTR_3g034160	56.667	210	80	6	3	207	171	374	8.38e-62	197
MS.gene038756.t1	MTR_4g094365	54.950	202	80	6	10	208	171	364	9.78e-62	196
MS.gene038756.t1	MTR_4g117780	57.143	203	79	4	9	208	170	367	2.79e-61	195
MS.gene038756.t1	MTR_4g023080	54.369	206	85	5	2	207	157	353	3.48e-61	194
MS.gene038756.t1	MTR_4g021785	54.589	207	86	5	2	208	157	355	1.18e-59	191
MS.gene038756.t1	MTR_4g023070	54.286	210	74	6	11	207	169	369	1.28e-59	191
MS.gene038756.t1	MTR_4g023090	50.000	216	85	6	6	207	177	383	5.80e-58	187
MS.gene038756.t1	MTR_4g118380	55.738	183	64	5	8	181	183	357	5.94e-57	184
MS.gene038756.t1	MTR_4g118400	55.385	195	67	6	8	202	120	294	1.76e-56	181
MS.gene038756.t1	MTR_8g433030	53.465	202	83	8	4	202	143	336	8.77e-56	180
MS.gene038756.t1	MTR_4g023120	51.659	211	80	6	11	208	169	370	1.25e-55	181
MS.gene038756.t1	MTR_8g032390	53.465	202	83	8	4	202	176	369	2.82e-55	180
MS.gene038756.t1	MTR_6g463430	48.585	212	95	6	1	208	1	202	2.05e-54	172
MS.gene038756.t1	MTR_4g023380	48.848	217	80	6	13	207	169	376	2.79e-54	177
MS.gene038756.t1	MTR_8g433040	50.481	208	85	5	2	208	174	364	9.75e-53	173
MS.gene038756.t1	MTR_8g032380	50.481	208	85	5	2	208	174	364	9.75e-53	173
MS.gene038756.t1	MTR_5g097210	49.749	199	90	6	8	204	169	359	9.89e-52	171
MS.gene038756.t1	MTR_1g055175	48.259	201	91	8	13	208	9	201	1.40e-51	165
MS.gene038756.t1	MTR_4g023190	52.683	205	81	9	7	206	164	357	2.26e-51	169
MS.gene038756.t1	MTR_5g070080	48.095	210	101	6	1	208	183	386	2.00e-48	162
MS.gene038756.t1	MTR_4g117530	46.701	197	66	6	12	208	96	253	2.26e-48	159
MS.gene038756.t1	MTR_4g023200	49.268	205	89	9	7	206	164	358	5.42e-47	158
MS.gene038756.t1	MTR_1g055195	46.377	207	89	7	13	208	283	478	5.45e-47	161
MS.gene038756.t1	MTR_1g055135	47.343	207	97	6	8	208	175	375	2.30e-46	157
MS.gene038756.t1	MTR_4g117870	45.320	203	69	4	6	208	107	267	2.38e-46	154
MS.gene038756.t1	MTR_4g023150	50.244	205	87	9	7	206	164	358	3.95e-46	156
MS.gene038756.t1	MTR_1g055165	51.852	162	71	5	49	208	162	318	3.96e-46	155
MS.gene038756.t1	MTR_4g117750	44.878	205	98	6	11	207	161	358	6.95e-44	153
MS.gene038756.t1	MTR_4g117750	60.000	110	42	1	98	207	373	480	1.88e-35	130
MS.gene038756.t1	MTR_7g079400	45.673	208	96	9	10	208	138	337	1.74e-43	148
MS.gene038756.t1	MTR_5g070130	43.627	204	105	5	11	208	176	375	2.02e-43	149
MS.gene038756.t1	MTR_4g118370	43.590	195	85	5	11	204	86	256	1.24e-42	144
MS.gene038756.t1	MTR_8g102520	41.346	208	111	6	5	208	122	322	2.09e-42	145
MS.gene038756.t1	MTR_4g023440	44.724	199	64	5	10	208	180	332	2.04e-39	138
MS.gene038756.t1	MTR_4g121580	45.596	193	69	6	8	198	181	339	1.56e-38	137
MS.gene038756.t1	MTR_1g055250	42.000	200	101	8	8	201	73	263	1.96e-38	135
MS.gene038756.t1	MTR_4g118360	56.154	130	49	5	83	208	1	126	5.20e-38	128
MS.gene038756.t1	MTR_4g116330	43.939	198	64	4	13	208	189	341	6.69e-38	134
MS.gene038756.t1	MTR_5g070088	43.434	198	96	5	11	202	192	379	2.19e-37	134
MS.gene038756.t1	MTR_4g117430	63.303	109	28	4	1	109	58	154	2.58e-35	122
MS.gene038756.t1	MTR_7g079370	43.077	195	97	10	13	202	165	350	2.00e-34	125
MS.gene038756.t1	MTR_5g023000	61.702	94	36	0	115	208	6	99	4.15e-34	117
MS.gene038756.t1	MTR_4g122860	40.513	195	81	5	18	208	157	320	5.96e-33	121
MS.gene038756.t1	MTR_8g098830	43.931	173	86	7	9	178	31	195	2.15e-32	117
MS.gene038756.t1	MTR_4g114700	39.791	191	60	5	11	198	79	217	2.80e-29	109
MS.gene038756.t1	MTR_2g048580	37.264	212	109	12	3	208	149	342	1.11e-28	110
MS.gene038756.t1	MTR_7g079420	38.830	188	97	9	30	208	966	1144	5.24e-27	108
MS.gene038756.t1	MTR_7g079450	41.549	142	76	4	68	208	2	137	2.98e-24	93.6
MS.gene038756.t1	MTR_8g013010	55.263	114	39	6	1	113	212	314	6.21e-24	97.1
MS.gene038756.t1	MTR_8g013005	66.102	59	20	0	150	208	1	59	5.84e-20	80.1
MS.gene038756.t1	MTR_7g117720	56.977	86	33	2	121	202	186	271	1.90e-19	84.0
MS.gene038756.t1	MTR_4g023430	38.017	121	57	3	94	208	114	222	1.22e-16	75.5
MS.gene038756.t1	MTR_6g034720	46.739	92	41	3	8	97	99	184	1.14e-14	70.1
MS.gene038756.t1	MTR_4g109290	50.000	70	31	1	139	208	123	188	2.89e-11	60.5
MS.gene038756.t1	MTR_2g064960	64.286	42	15	0	167	208	18	59	7.88e-11	56.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene038756.t1	AT3G06240	30.256	195	108	9	16	200	243	419	4.22e-12	64.7

Find 50 sgRNAs with CRISPR-Local

Find 52 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGGAGAATTTCTTAGTTTA+TGG	0.111007	8.3:+14229718	MS.gene038756:CDS
GTCATGATTCACGTTTATTA+AGG	0.188886	8.3:+14229595	MS.gene038756:CDS
TATTGTGGTTTGTGGGTATT+TGG	0.253702	8.3:+14229699	MS.gene038756:CDS
ATATTGATACAATTGAAATA+TGG	0.279816	8.3:+14229754	MS.gene038756:CDS
TGGAGAATTTCTTAGTTTAT+GGG	0.300088	8.3:+14229719	MS.gene038756:CDS
TATTGTTGTCTTTGATTTAA+CGG	0.303490	8.3:+14229623	MS.gene038756:CDS
TACTAATATTTCATCGCAAT+TGG	0.320204	8.3:+14229434	MS.gene038756:CDS
TATTGATACAATTGAAATAT+GGG	0.363603	8.3:+14229755	MS.gene038756:CDS
ATTGAAACAGATGGTGATAC+TGG	0.365088	8.3:+14229891	MS.gene038756:CDS
TCATGATTCACGTTTATTAA+GGG	0.367232	8.3:+14229596	MS.gene038756:CDS
CCTCAATGGGATTGCTATAA+CGG	0.368433	8.3:-14229515	None:intergenic
TGCGATGAAATATTAGTAAC+CGG	0.431931	8.3:-14229429	None:intergenic
AATACAAAATGCCTTCATCT+TGG	0.434813	8.3:+14229787	MS.gene038756:CDS
TATTTAATGAGGCTATTCAT+TGG	0.437891	8.3:+14229562	MS.gene038756:CDS
GGTTTCAATGCTCATTGATC+CGG	0.441203	8.3:+14229410	None:intergenic
CTTAGGCTGCTCATCCTCAA+TGG	0.445603	8.3:-14229529	None:intergenic
TTAAATAGCAACCCCGGCTT+AGG	0.449345	8.3:-14229546	None:intergenic
AACTTGACTATTGTGGTTTG+TGG	0.450962	8.3:+14229691	MS.gene038756:CDS
AACCACAATAGTCAAGTTGA+TGG	0.467522	8.3:-14229686	None:intergenic
ATTTCTTAGTTTATGGGCTA+AGG	0.469399	8.3:+14229725	MS.gene038756:CDS
TGTCTTTGATTTAACGGAAA+GGG	0.470268	8.3:+14229629	MS.gene038756:CDS
TAATGAGGCTATTCATTGGT+TGG	0.476284	8.3:+14229566	MS.gene038756:CDS
AGTTGATGGTCAAACTCATC+TGG	0.476777	8.3:-14229672	None:intergenic
TTAGGCTGCTCATCCTCAAT+GGG	0.484131	8.3:-14229528	None:intergenic
GAGGATGAGCAGCCTAAGCC+GGG	0.489365	8.3:+14229534	MS.gene038756:CDS
TGAGGATGAGCAGCCTAAGC+CGG	0.491054	8.3:+14229533	MS.gene038756:CDS
ACTTGACTATTGTGGTTTGT+GGG	0.504506	8.3:+14229692	MS.gene038756:CDS
CTGATTTCACTTCCTTGTGA+CGG	0.505657	8.3:+14230008	MS.gene038756:CDS
CCGTTATAGCAATCCCATTG+AGG	0.526015	8.3:+14229515	MS.gene038756:CDS
GCCGGGGTTGCTATTTAATG+AGG	0.531997	8.3:+14229551	MS.gene038756:CDS
GACCATCAACTTGACTATTG+TGG	0.546126	8.3:+14229684	MS.gene038756:CDS
TTGTCTTTGATTTAACGGAA+AGG	0.568763	8.3:+14229628	MS.gene038756:CDS
TGAGTCTTAGTCCAAGATGA+AGG	0.569111	8.3:-14229798	None:intergenic
GTGGAAAGAAATTGAGATCG+AGG	0.598854	8.3:+14229482	MS.gene038756:CDS
TGGAAAGAAATTGAGATCGA+GGG	0.601685	8.3:+14229483	MS.gene038756:CDS
GCCTCATTAAATAGCAACCC+CGG	0.605181	8.3:-14229552	None:intergenic
AACAGATGGTGATACTGGAT+TGG	0.615393	8.3:+14229896	MS.gene038756:CDS
TCCATGTGAATCGTTGCGGA+AGG	0.617460	8.3:-14229958	None:intergenic
TAAGCTTGTTCACCGTCACA+AGG	0.619980	8.3:-14230020	None:intergenic
AATGGAGAAAAGTAATCTGT+CGG	0.624209	8.3:-14229843	None:intergenic
GGTGATATTATTGAAACAGA+TGG	0.625686	8.3:+14229882	MS.gene038756:CDS
CTCGGTATATATAGCCACAT+GGG	0.627450	8.3:-14229982	None:intergenic
GGGATCCATGTGAATCGTTG+CGG	0.632127	8.3:-14229962	None:intergenic
TCCTTCCGCAACGATTCACA+TGG	0.639682	8.3:+14229957	MS.gene038756:CDS
ACTCGGTATATATAGCCACA+TGG	0.649360	8.3:-14229983	None:intergenic
AGGAAGTGAAATCAGAGACT+CGG	0.652262	8.3:-14230000	None:intergenic
TCTCGTTGAGAGATAATACG+TGG	0.669859	8.3:+14229463	MS.gene038756:CDS
CGATTCACATGGATCCCATG+TGG	0.708556	8.3:+14229968	MS.gene038756:CDS
AGGATGAGCAGCCTAAGCCG+GGG	0.728363	8.3:+14229535	MS.gene038756:CDS
TTGGTGAAGTCTGATGACAA+AGG	0.797487	8.3:+14229915	MS.gene038756:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATATTGATACAATTGAAATA+TGG	+	chr8.3:14229754-14229773	MS.gene038756:CDS	15.0%
!!	TATTGATACAATTGAAATAT+GGG	+	chr8.3:14229755-14229774	MS.gene038756:CDS	15.0%
!!!	TATTGTTGTCTTTGATTTAA+CGG	+	chr8.3:14229623-14229642	MS.gene038756:CDS	20.0%
!	TACTAATATTTCATCGCAAT+TGG	+	chr8.3:14229434-14229453	MS.gene038756:CDS	25.0%
!	TATTTAATGAGGCTATTCAT+TGG	+	chr8.3:14229562-14229581	MS.gene038756:CDS	25.0%
!	TCATGATTCACGTTTATTAA+GGG	+	chr8.3:14229596-14229615	MS.gene038756:CDS	25.0%
!	TGGAGAATTTCTTAGTTTAT+GGG	+	chr8.3:14229719-14229738	MS.gene038756:CDS	25.0%
!	TTGGAGAATTTCTTAGTTTA+TGG	+	chr8.3:14229718-14229737	MS.gene038756:CDS	25.0%
	AATACAAAATGCCTTCATCT+TGG	+	chr8.3:14229787-14229806	MS.gene038756:CDS	30.0%
	AATGGAGAAAAGTAATCTGT+CGG	-	chr8.3:14229846-14229865	None:intergenic	30.0%
	GGTGATATTATTGAAACAGA+TGG	+	chr8.3:14229882-14229901	MS.gene038756:CDS	30.0%
	GTCATGATTCACGTTTATTA+AGG	+	chr8.3:14229595-14229614	MS.gene038756:CDS	30.0%
	TGCGATGAAATATTAGTAAC+CGG	-	chr8.3:14229432-14229451	None:intergenic	30.0%
!	ATTTCTTAGTTTATGGGCTA+AGG	+	chr8.3:14229725-14229744	MS.gene038756:CDS	30.0%
!	TGTCTTTGATTTAACGGAAA+GGG	+	chr8.3:14229629-14229648	MS.gene038756:CDS	30.0%
!	TTGTCTTTGATTTAACGGAA+AGG	+	chr8.3:14229628-14229647	MS.gene038756:CDS	30.0%
	AACTTGACTATTGTGGTTTG+TGG	+	chr8.3:14229691-14229710	MS.gene038756:CDS	35.0%
	ATTGAAACAGATGGTGATAC+TGG	+	chr8.3:14229891-14229910	MS.gene038756:CDS	35.0%
	CCATTGTGTTGTACAAAAAG+TGG	+	chr8.3:14229861-14229880	MS.gene038756:CDS	35.0%
	TAATGAGGCTATTCATTGGT+TGG	+	chr8.3:14229566-14229585	MS.gene038756:CDS	35.0%
	TGGAAAGAAATTGAGATCGA+GGG	+	chr8.3:14229483-14229502	MS.gene038756:CDS	35.0%
!	ACTTGACTATTGTGGTTTGT+GGG	+	chr8.3:14229692-14229711	MS.gene038756:CDS	35.0%
!	GGAAAGGGAACTTTTTGATA+TGG	+	chr8.3:14229644-14229663	MS.gene038756:CDS	35.0%
!	TATTGTGGTTTGTGGGTATT+TGG	+	chr8.3:14229699-14229718	MS.gene038756:CDS	35.0%
!!	AACCACAATAGTCAAGTTGA+TGG	-	chr8.3:14229689-14229708	None:intergenic	35.0%
!!!	CCACTTTTTGTACAACACAA+TGG	-	chr8.3:14229864-14229883	None:intergenic	35.0%
	AACAGATGGTGATACTGGAT+TGG	+	chr8.3:14229896-14229915	MS.gene038756:CDS	40.0%
	ACTCGGTATATATAGCCACA+TGG	-	chr8.3:14229986-14230005	None:intergenic	40.0%
	AGGAAGTGAAATCAGAGACT+CGG	-	chr8.3:14230003-14230022	None:intergenic	40.0%
	CCTCAATGGGATTGCTATAA+CGG	-	chr8.3:14229518-14229537	None:intergenic	40.0%
	CTCGGTATATATAGCCACAT+GGG	-	chr8.3:14229985-14230004	None:intergenic	40.0%
	CTGATTTCACTTCCTTGTGA+CGG	+	chr8.3:14230008-14230027	MS.gene038756:CDS	40.0%
	GACCATCAACTTGACTATTG+TGG	+	chr8.3:14229684-14229703	MS.gene038756:CDS	40.0%
	GTGGAAAGAAATTGAGATCG+AGG	+	chr8.3:14229482-14229501	MS.gene038756:CDS	40.0%
	TCTCGTTGAGAGATAATACG+TGG	+	chr8.3:14229463-14229482	MS.gene038756:CDS	40.0%
	TGAGTCTTAGTCCAAGATGA+AGG	-	chr8.3:14229801-14229820	None:intergenic	40.0%
	TTGGTGAAGTCTGATGACAA+AGG	+	chr8.3:14229915-14229934	MS.gene038756:CDS	40.0%
!!	AGTTGATGGTCAAACTCATC+TGG	-	chr8.3:14229675-14229694	None:intergenic	40.0%
	CCGTTATAGCAATCCCATTG+AGG	+	chr8.3:14229515-14229534	MS.gene038756:CDS	45.0%
	GCCTCATTAAATAGCAACCC+CGG	-	chr8.3:14229555-14229574	None:intergenic	45.0%
	TTAAATAGCAACCCCGGCTT+AGG	-	chr8.3:14229549-14229568	None:intergenic	45.0%
	TTAGGCTGCTCATCCTCAAT+GGG	-	chr8.3:14229531-14229550	None:intergenic	45.0%
!	TAAGCTTGTTCACCGTCACA+AGG	-	chr8.3:14230023-14230042	None:intergenic	45.0%
	CGATTCACATGGATCCCATG+TGG	+	chr8.3:14229968-14229987	MS.gene038756:CDS	50.0%
	CTTAGGCTGCTCATCCTCAA+TGG	-	chr8.3:14229532-14229551	None:intergenic	50.0%
	GGGATCCATGTGAATCGTTG+CGG	-	chr8.3:14229965-14229984	None:intergenic	50.0%
	TCCATGTGAATCGTTGCGGA+AGG	-	chr8.3:14229961-14229980	None:intergenic	50.0%
	TCCTTCCGCAACGATTCACA+TGG	+	chr8.3:14229957-14229976	MS.gene038756:CDS	50.0%
!!	GCCGGGGTTGCTATTTAATG+AGG	+	chr8.3:14229551-14229570	MS.gene038756:CDS	50.0%
	TGAGGATGAGCAGCCTAAGC+CGG	+	chr8.3:14229533-14229552	MS.gene038756:CDS	55.0%
	AGGATGAGCAGCCTAAGCCG+GGG	+	chr8.3:14229535-14229554	MS.gene038756:CDS	60.0%
	GAGGATGAGCAGCCTAAGCC+GGG	+	chr8.3:14229534-14229553	MS.gene038756:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	14229417	14230043	14229417	ID=MS.gene038756
chr8.3	mRNA	14229417	14230043	14229417	ID=MS.gene038756.t1;Parent=MS.gene038756
chr8.3	exon	14229417	14230043	14229417	ID=MS.gene038756.t1.exon1;Parent=MS.gene038756.t1
chr8.3	CDS	14229417	14230043	14229417	ID=cds.MS.gene038756.t1;Parent=MS.gene038756.t1

Gene Sequence

>MS.gene038756

ATGCTCATTGATCCGGTTACTAATATTTCATCGCAATTGGAGTTTTTCTCGTTGAGAGATAATACGTGGAAAGAAATTGAGATCGAGGGTAGTCATTTCCGTTATAGCAATCCCATTGAGGATGAGCAGCCTAAGCCGGGGTTGCTATTTAATGAGGCTATTCATTGGTTGGCTTATCGTCATGATTCACGTTTATTAAGGGATGTTATTGTTGTCTTTGATTTAACGGAAAGGGAACTTTTTGATATGGATTTGCCAGATGAGTTTGACCATCAACTTGACTATTGTGGTTTGTGGGTATTTGGAGAATTTCTTAGTTTATGGGCTAAGGATTGTTATATTGATACAATTGAAATATGGGTGATGAAAGAATACAAAATGCCTTCATCTTGGACTAAGACTCATGTTCTGTCTTTTGATAGTATGCCGACAGATTACTTTTCTCCATTGTGTTGTACAAAAAGTGGTGATATTATTGAAACAGATGGTGATACTGGATTGGTGAAGTCTGATGACAAAGGACAACTGCTTGAGCATCGCTCCTTCCGCAACGATTCACATGGATCCCATGTGGCTATATATACCGAGTCTCTGATTTCACTTCCTTGTGACGGTGAACAAGCTTAA

Protein sequence

>MS.gene038756.t1

MLIDPVTNISSQLEFFSLRDNTWKEIEIEGSHFRYSNPIEDEQPKPGLLFNEAIHWLAYRHDSRLLRDVIVVFDLTERELFDMDLPDEFDHQLDYCGLWVFGEFLSLWAKDCYIDTIEIWVMKEYKMPSSWTKTHVLSFDSMPTDYFSPLCCTKSGDIIETDGDTGLVKSDDKGQLLEHRSFRNDSHGSHVAIYTESLISLPCDGEQA