AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51190


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51190.t1 MTR_8g102520 58.491 371 101 7 1 367 1 322 1.53e-137 394
MS.gene51190.t1 MTR_7g079370 55.224 335 138 5 38 361 17 350 5.62e-113 333
MS.gene51190.t1 MTR_2g048580 50.396 379 139 15 1 367 1 342 1.11e-107 319
MS.gene51190.t1 MTR_7g079400 55.184 299 120 4 77 367 45 337 5.30e-104 310
MS.gene51190.t1 MTR_5g070088 42.559 383 185 11 6 361 5 379 1.37e-86 267
MS.gene51190.t1 MTR_4g116330 43.666 371 187 10 7 367 22 380 5.73e-86 265
MS.gene51190.t1 MTR_4g094365 43.467 375 193 11 1 367 1 364 2.64e-85 263
MS.gene51190.t1 MTR_3g103020 42.971 377 194 10 1 367 13 378 3.42e-84 260
MS.gene51190.t1 MTR_4g109280 45.333 375 181 12 1 367 1 359 2.85e-83 258
MS.gene51190.t1 MTR_5g070080 41.316 380 191 8 6 361 8 379 1.20e-82 257
MS.gene51190.t1 MTR_6g060650 43.832 381 190 8 1 366 1 372 6.52e-82 254
MS.gene51190.t1 MTR_4g023080 43.666 371 174 12 1 360 1 347 5.50e-81 251
MS.gene51190.t1 MTR_3g034180 43.122 378 188 13 6 366 121 488 1.31e-80 254
MS.gene51190.t1 MTR_5g070130 42.276 369 193 9 7 362 10 371 3.48e-80 251
MS.gene51190.t1 MTR_4g117770 43.902 369 188 10 7 367 10 367 3.21e-79 247
MS.gene51190.t1 MTR_4g117810 43.902 369 188 10 7 367 10 367 3.21e-79 247
MS.gene51190.t1 MTR_4g109270 44.531 384 176 15 1 367 1 364 4.20e-79 247
MS.gene51190.t1 MTR_4g117780 43.207 368 190 11 8 367 11 367 1.16e-78 246
MS.gene51190.t1 MTR_1g055135 40.106 379 204 8 2 367 7 375 5.76e-78 244
MS.gene51190.t1 MTR_5g097210 41.918 365 187 11 8 362 9 358 1.99e-77 243
MS.gene51190.t1 MTR_4g117850 42.547 369 184 12 7 362 22 375 2.48e-77 243
MS.gene51190.t1 MTR_4g023070 42.021 376 180 15 8 360 3 363 3.32e-77 242
MS.gene51190.t1 MTR_3g034130 42.000 350 182 9 6 340 7 350 1.26e-76 241
MS.gene51190.t1 MTR_4g117720 41.667 372 162 11 1 361 44 371 2.61e-76 240
MS.gene51190.t1 MTR_4g023120 40.885 384 173 16 8 360 3 363 2.34e-75 238
MS.gene51190.t1 MTR_4g021785 41.240 371 187 11 6 367 7 355 2.51e-74 234
MS.gene51190.t1 MTR_3g034160 41.287 373 192 12 6 361 7 369 2.82e-74 235
MS.gene51190.t1 MTR_4g122850 42.778 360 188 14 19 367 12 364 3.13e-74 235
MS.gene51190.t1 MTR_4g023090 40.691 376 190 14 7 361 15 378 5.13e-73 232
MS.gene51190.t1 MTR_4g117750 43.200 375 178 12 8 366 3 358 6.97e-73 234
MS.gene51190.t1 MTR_4g117750 42.727 110 50 4 260 361 373 477 5.07e-12 67.4
MS.gene51190.t1 MTR_4g023190 43.989 366 175 13 6 361 8 353 9.51e-73 230
MS.gene51190.t1 MTR_8g433040 40.374 374 190 13 4 367 14 364 6.57e-72 228
MS.gene51190.t1 MTR_8g032380 40.374 374 190 13 4 367 14 364 6.57e-72 228
MS.gene51190.t1 MTR_4g116330 40.108 369 164 10 7 367 22 341 4.99e-71 225
MS.gene51190.t1 MTR_8g098830 64.706 170 56 2 175 341 32 200 1.45e-70 220
MS.gene51190.t1 MTR_4g023150 42.077 366 183 12 6 361 8 354 5.40e-70 223
MS.gene51190.t1 MTR_8g013010 46.324 272 134 6 1 269 47 309 1.06e-69 221
MS.gene51190.t1 MTR_4g118380 40.278 360 191 7 1 339 1 357 7.29e-69 220
MS.gene51190.t1 MTR_8g032390 39.891 366 180 12 4 361 36 369 1.44e-68 220
MS.gene51190.t1 MTR_4g023130 39.295 369 152 11 1 360 1 306 1.96e-67 215
MS.gene51190.t1 MTR_4g023200 41.880 351 173 13 22 361 24 354 9.80e-67 215
MS.gene51190.t1 MTR_7g079420 48.551 276 96 8 103 367 904 1144 4.50e-64 221
MS.gene51190.t1 MTR_4g023440 39.084 371 161 12 7 367 17 332 7.58e-64 207
MS.gene51190.t1 MTR_4g023380 37.726 387 179 13 7 361 15 371 4.08e-63 206
MS.gene51190.t1 MTR_7g079450 70.714 140 37 1 228 367 2 137 6.65e-62 195
MS.gene51190.t1 MTR_1g055165 34.153 366 180 8 7 367 9 318 2.63e-57 189
MS.gene51190.t1 MTR_4g117870 42.105 304 129 10 68 367 7 267 2.28e-56 185
MS.gene51190.t1 MTR_4g121580 37.978 366 178 14 6 357 9 339 1.98e-55 186
MS.gene51190.t1 MTR_1g055195 38.328 287 149 7 91 367 210 478 4.53e-52 180
MS.gene51190.t1 MTR_5g069120 53.371 178 75 3 18 187 1 178 2.33e-50 167
MS.gene51190.t1 MTR_4g118400 41.603 262 112 9 104 361 70 294 1.56e-49 168
MS.gene51190.t1 MTR_4g118370 40.530 264 118 9 107 362 23 255 2.80e-48 164
MS.gene51190.t1 MTR_8g433030 35.165 364 167 12 4 361 36 336 5.92e-47 163
MS.gene51190.t1 MTR_4g116340 41.350 237 115 6 2 233 30 247 7.72e-46 157
MS.gene51190.t1 MTR_4g116320 45.327 214 107 7 154 361 43 252 4.04e-44 153
MS.gene51190.t1 MTR_4g117530 37.903 248 111 5 122 367 47 253 8.56e-40 142
MS.gene51190.t1 MTR_1g055175 41.026 195 108 4 178 367 9 201 1.02e-39 140
MS.gene51190.t1 MTR_4g107820 30.504 377 225 15 8 367 36 392 1.62e-33 129
MS.gene51190.t1 MTR_4g107820 30.894 369 219 14 8 359 36 385 1.86e-33 128
MS.gene51190.t1 MTR_4g107780 30.894 369 219 14 8 359 36 385 1.86e-33 128
MS.gene51190.t1 MTR_4g107780 30.504 377 225 15 8 367 36 392 1.87e-33 129
MS.gene51190.t1 MTR_2g021150 29.483 329 199 14 8 317 14 328 2.24e-33 127
MS.gene51190.t1 MTR_1g055250 35.377 212 124 6 149 354 49 253 2.79e-32 124
MS.gene51190.t1 MTR_4g108820 32.313 294 154 10 8 300 42 291 1.18e-31 122
MS.gene51190.t1 MTR_8g040935 39.086 197 111 5 178 367 14 208 4.49e-31 117
MS.gene51190.t1 MTR_6g463430 41.624 197 101 8 172 361 7 196 5.74e-30 114
MS.gene51190.t1 MTR_1g097560 30.508 295 174 12 7 293 35 306 7.65e-30 118
MS.gene51190.t1 MTR_4g133170 27.795 331 197 13 8 317 4 313 8.12e-30 118
MS.gene51190.t1 MTR_1g097490 29.363 361 229 12 7 359 48 390 8.50e-30 118
MS.gene51190.t1 MTR_3g007360 29.801 302 185 10 11 300 55 341 2.79e-29 117
MS.gene51190.t1 MTR_4g117430 40.268 149 68 5 105 249 3 134 9.85e-29 109
MS.gene51190.t1 MTR_3g007410 29.470 302 186 10 11 300 55 341 1.39e-28 115
MS.gene51190.t1 MTR_6g021880 28.375 363 226 17 19 359 31 381 2.09e-28 114
MS.gene51190.t1 MTR_4g114700 34.351 262 112 9 105 358 9 218 4.15e-28 110
MS.gene51190.t1 MTR_3g009310 29.836 305 181 10 8 298 42 327 6.15e-28 113
MS.gene51190.t1 MTR_5g057790 29.801 302 187 10 8 299 46 332 6.66e-28 113
MS.gene51190.t1 MTR_5g057710 29.139 302 189 11 8 299 46 332 9.28e-28 112
MS.gene51190.t1 MTR_4g061340 30.868 311 177 12 8 299 26 317 1.38e-27 112
MS.gene51190.t1 MTR_4g055060 30.284 317 171 15 8 298 30 322 3.01e-27 111
MS.gene51190.t1 MTR_7g117720 38.000 200 93 8 7 199 9 184 4.27e-27 108
MS.gene51190.t1 MTR_7g117720 46.875 96 46 3 272 362 177 272 1.70e-14 73.2
MS.gene51190.t1 MTR_2g055970 32.673 303 166 13 8 293 211 492 5.23e-27 112
MS.gene51190.t1 MTR_8g467140 31.126 302 172 12 8 293 32 313 7.54e-27 109
MS.gene51190.t1 MTR_5g022420 28.792 389 202 19 8 359 27 377 1.15e-26 109
MS.gene51190.t1 MTR_6g004660 28.803 309 195 11 8 299 16 316 4.16e-26 108
MS.gene51190.t1 MTR_3g007330 31.023 303 177 13 8 299 48 329 4.36e-26 108
MS.gene51190.t1 MTR_3g007430 29.012 324 202 13 11 322 46 353 8.93e-26 107
MS.gene51190.t1 MTR_4g118360 45.833 120 64 1 243 361 1 120 9.61e-26 100
MS.gene51190.t1 MTR_0064s0160 30.061 326 193 12 1 295 35 356 1.25e-25 107
MS.gene51190.t1 MTR_3g006670 31.290 310 167 13 8 295 49 334 6.85e-25 105
MS.gene51190.t1 MTR_2g104340 25.250 400 233 12 7 360 13 392 1.16e-24 104
MS.gene51190.t1 MTR_5g057020 26.441 295 191 9 8 299 46 317 1.17e-24 103
MS.gene51190.t1 MTR_3g010590 28.213 319 179 15 8 307 39 326 2.09e-24 103
MS.gene51190.t1 MTR_3g036290 27.545 334 196 16 8 325 22 325 5.55e-24 101
MS.gene51190.t1 MTR_8g101580 30.392 306 179 14 3 293 40 326 6.93e-24 102
MS.gene51190.t1 MTR_6g065980 28.041 296 178 13 8 295 16 284 1.33e-23 100
MS.gene51190.t1 MTR_2g029990 27.027 296 196 10 9 295 52 336 1.70e-23 100
MS.gene51190.t1 MTR_1g097330 29.360 344 193 14 8 328 16 332 1.85e-23 100
MS.gene51190.t1 MTR_5g057690 27.609 297 190 10 8 299 46 322 2.08e-23 100
MS.gene51190.t1 MTR_3g009240 28.053 303 187 11 8 299 36 318 2.27e-23 100
MS.gene51190.t1 MTR_7g070830 25.862 406 243 16 8 360 21 421 3.42e-23 100
MS.gene51190.t1 MTR_2g028110 28.000 325 202 15 8 314 4 314 8.61e-23 98.6
MS.gene51190.t1 MTR_1g055070 28.090 267 158 8 6 247 47 304 9.56e-23 98.6
MS.gene51190.t1 MTR_3g014540 28.247 308 178 11 8 295 29 313 1.16e-22 98.2
MS.gene51190.t1 MTR_2g046920 27.148 291 196 8 8 293 24 303 1.18e-22 98.2
MS.gene51190.t1 MTR_3g007270 27.331 311 187 15 8 295 47 341 1.37e-22 98.6
MS.gene51190.t1 MTR_7g070880 25.123 406 246 15 8 360 21 421 1.44e-22 98.6
MS.gene51190.t1 MTR_7g066000 28.446 341 206 14 8 317 25 358 1.45e-22 98.2
MS.gene51190.t1 MTR_7g067680 28.618 304 162 13 8 295 49 313 1.57e-22 98.2
MS.gene51190.t1 MTR_3g013740 28.846 312 179 13 8 293 44 338 1.63e-22 98.2
MS.gene51190.t1 MTR_2g028130 25.954 393 228 18 5 357 2 371 1.71e-22 98.2
MS.gene51190.t1 MTR_5g011200 27.541 305 182 12 8 293 17 301 1.99e-22 97.4
MS.gene51190.t1 MTR_2g024110 24.927 341 218 13 8 327 4 327 2.16e-22 97.4
MS.gene51190.t1 MTR_2g028140 26.368 402 224 15 5 362 2 375 2.48e-22 97.8
MS.gene51190.t1 MTR_1g068875 27.193 342 218 13 8 337 4 326 2.79e-22 97.4
MS.gene51190.t1 MTR_2g021190 27.778 306 183 12 8 295 21 306 4.01e-22 96.7
MS.gene51190.t1 MTR_2g028160 25.510 392 247 18 5 364 2 380 5.08e-22 97.1
MS.gene51190.t1 MTR_3g011100 28.344 314 182 14 8 299 235 527 5.16e-22 97.8
MS.gene51190.t1 MTR_1g094210 26.316 380 214 14 8 359 57 398 5.55e-22 96.7
MS.gene51190.t1 MTR_7g062100 28.161 348 195 13 8 317 24 354 6.01e-22 96.7
MS.gene51190.t1 MTR_5g069930 25.356 351 205 15 5 317 3 334 6.60e-22 96.3
MS.gene51190.t1 MTR_5g023000 53.763 93 40 2 277 367 8 99 7.09e-22 89.4
MS.gene51190.t1 MTR_7g060940 28.267 329 174 13 8 299 22 325 9.28e-22 95.9
MS.gene51190.t1 MTR_3g010870 26.962 293 189 12 8 293 37 311 1.21e-21 95.5
MS.gene51190.t1 MTR_7g013590 29.492 295 179 12 15 295 43 322 1.24e-21 95.5
MS.gene51190.t1 MTR_1g094210 26.404 356 198 13 8 335 57 376 1.60e-21 95.5
MS.gene51190.t1 MTR_3g023930 27.273 297 173 11 8 295 34 296 1.92e-21 94.7
MS.gene51190.t1 MTR_3g009260 28.226 372 213 19 11 359 44 384 2.07e-21 94.7
MS.gene51190.t1 MTR_5g059430 25.862 406 237 16 7 358 25 420 2.10e-21 95.1
MS.gene51190.t1 MTR_0128s0020 27.385 325 186 12 6 299 16 321 3.21e-21 94.4
MS.gene51190.t1 MTR_1g050542 25.397 378 225 16 8 359 58 404 3.46e-21 94.4
MS.gene51190.t1 MTR_3g013770 28.065 310 180 12 8 295 33 321 5.20e-21 93.6
MS.gene51190.t1 MTR_3g024110 26.645 304 186 12 8 299 101 379 6.07e-21 94.0
MS.gene51190.t1 MTR_3g010970 24.734 376 221 15 11 359 51 391 6.94e-21 93.6
MS.gene51190.t1 MTR_7g007300 26.738 374 221 17 8 359 103 445 9.69e-21 93.6
MS.gene51190.t1 MTR_1g115160 27.832 309 167 15 6 293 20 293 1.18e-20 92.4
MS.gene51190.t1 MTR_7g066100 24.872 390 260 8 4 361 7 395 1.45e-20 92.4
MS.gene51190.t1 MTR_5g069760 25.074 339 212 12 6 317 4 327 1.69e-20 92.0
MS.gene51190.t1 MTR_7g070440 28.086 324 193 15 10 309 9 316 1.74e-20 92.0
MS.gene51190.t1 MTR_1g054575 27.000 300 179 12 8 292 52 326 1.86e-20 93.2
MS.gene51190.t1 MTR_3g014570 28.254 315 177 12 8 299 29 317 1.89e-20 92.0
MS.gene51190.t1 MTR_6g007135 26.518 313 205 10 8 305 26 328 2.35e-20 91.7
MS.gene51190.t1 MTR_2g066200 25.450 389 240 15 7 360 11 384 2.61e-20 91.7
MS.gene51190.t1 MTR_3g030240 25.697 323 191 13 8 315 40 328 3.22e-20 91.3
MS.gene51190.t1 MTR_1g088120 27.356 329 187 12 10 299 12 327 3.38e-20 91.7
MS.gene51190.t1 MTR_7g407070 26.247 381 220 14 8 356 32 383 3.62e-20 91.3
MS.gene51190.t1 MTR_0667s0010 26.893 383 231 17 7 363 5 364 4.56e-20 91.3
MS.gene51190.t1 MTR_4g055820 27.928 333 187 14 7 295 13 336 4.67e-20 90.5
MS.gene51190.t1 MTR_3g436150 26.720 378 216 16 8 356 32 377 4.91e-20 90.9
MS.gene51190.t1 MTR_3g083640 24.490 294 196 8 8 293 55 330 5.16e-20 90.9
MS.gene51190.t1 MTR_2g078900 25.413 303 187 12 8 295 33 311 5.34e-20 90.5
MS.gene51190.t1 MTR_7g056503 27.044 318 200 14 8 301 21 330 5.80e-20 90.9
MS.gene51190.t1 MTR_5g046300 24.503 302 198 10 8 299 4 285 6.25e-20 90.1
MS.gene51190.t1 MTR_5g046290 24.503 302 198 10 8 299 4 285 6.25e-20 90.1
MS.gene51190.t1 MTR_3g030330 27.333 300 181 11 8 295 20 294 7.42e-20 90.1
MS.gene51190.t1 MTR_4g109290 36.943 157 68 5 7 163 8 133 7.65e-20 86.7
MS.gene51190.t1 MTR_5g007610 29.870 308 190 12 8 299 41 338 1.01e-19 90.1
MS.gene51190.t1 MTR_2g021155 26.780 295 192 11 11 295 39 319 1.16e-19 91.3
MS.gene51190.t1 MTR_0267s0050 25.543 368 218 15 11 336 9 362 1.30e-19 89.7
MS.gene51190.t1 MTR_2g043400 26.254 339 179 11 8 301 23 335 1.37e-19 89.7
MS.gene51190.t1 MTR_0128s0070 26.769 325 189 12 6 300 20 325 1.42e-19 89.7
MS.gene51190.t1 MTR_7g061050 26.852 324 190 11 6 301 11 315 1.58e-19 89.4
MS.gene51190.t1 MTR_0115s0020 25.000 396 246 16 7 360 9 395 1.83e-19 89.4
MS.gene51190.t1 MTR_2g046900 26.316 323 216 11 8 320 28 338 2.04e-19 89.0
MS.gene51190.t1 MTR_6g053260 26.562 320 205 12 2 307 331 634 2.51e-19 90.1
MS.gene51190.t1 MTR_3g010520 27.000 300 171 14 8 295 25 288 2.53e-19 88.6
MS.gene51190.t1 MTR_4g070550 25.938 320 200 13 5 295 2 313 2.83e-19 89.0
MS.gene51190.t1 MTR_3g036430 24.503 302 192 10 8 309 20 285 2.88e-19 88.2
MS.gene51190.t1 MTR_1g054725 24.934 381 234 16 7 359 19 375 2.99e-19 88.6
MS.gene51190.t1 MTR_7g057270 25.000 328 201 9 8 301 26 342 3.34e-19 88.6
MS.gene51190.t1 MTR_3g010920 25.135 370 227 14 8 359 44 381 4.15e-19 88.2
MS.gene51190.t1 MTR_6g027910 25.789 380 234 17 11 359 12 374 4.17e-19 88.2
MS.gene51190.t1 MTR_7g061060 26.911 327 189 11 6 301 11 318 4.33e-19 88.2
MS.gene51190.t1 MTR_1g061330 25.714 385 222 17 8 360 4 356 4.99e-19 87.8
MS.gene51190.t1 MTR_7g055977 28.834 326 191 10 3 303 2 311 5.06e-19 87.8
MS.gene51190.t1 MTR_2g046800 27.879 330 174 15 8 293 14 323 5.24e-19 87.8
MS.gene51190.t1 MTR_3g030250 25.166 302 182 10 8 295 37 308 6.32e-19 87.4
MS.gene51190.t1 MTR_3g024150 24.671 304 183 12 11 295 38 314 6.88e-19 87.4
MS.gene51190.t1 MTR_7g069550 26.997 363 209 13 8 326 14 364 7.01e-19 87.4
MS.gene51190.t1 MTR_1g068835 25.143 350 216 15 8 337 4 327 1.05e-18 87.0
MS.gene51190.t1 MTR_6g055210 27.187 320 200 10 8 299 22 336 1.40e-18 87.0
MS.gene51190.t1 MTR_6g053240 24.375 320 205 11 8 307 28 330 2.03e-18 86.3
MS.gene51190.t1 MTR_7g056390 26.225 347 183 11 8 305 18 340 2.11e-18 86.3
MS.gene51190.t1 MTR_0044s0300 25.163 306 193 14 8 299 38 321 2.12e-18 86.3
MS.gene51190.t1 MTR_4g102410 23.284 335 203 11 5 295 58 382 2.57e-18 86.3
MS.gene51190.t1 MTR_1g068860 26.966 356 220 16 6 343 2 335 3.01e-18 85.5
MS.gene51190.t1 MTR_5g069390 25.333 375 226 14 7 336 25 390 3.64e-18 86.3
MS.gene51190.t1 MTR_0831s0010 25.872 344 205 16 7 317 49 375 4.08e-18 85.5
MS.gene51190.t1 MTR_3g023940 25.532 376 230 17 8 359 34 383 4.90e-18 85.1
MS.gene51190.t1 MTR_2g047200 27.273 396 226 19 6 359 18 393 5.39e-18 85.1
MS.gene51190.t1 MTR_2g047832 26.687 326 195 14 8 304 29 339 8.25e-18 84.7
MS.gene51190.t1 MTR_4g122860 32.990 194 89 7 183 366 157 319 1.00e-17 83.6
MS.gene51190.t1 MTR_4g028510 25.765 392 243 17 8 360 16 398 1.13e-17 84.3
MS.gene51190.t1 MTR_7g091630 23.512 336 207 9 2 301 26 347 1.21e-17 84.3
MS.gene51190.t1 MTR_7g028660 26.462 325 195 12 6 301 9 318 1.28e-17 83.6
MS.gene51190.t1 MTR_7g078860 23.120 359 213 11 8 317 9 353 1.29e-17 84.0
MS.gene51190.t1 MTR_3g010620 25.733 307 164 14 11 295 39 303 1.31e-17 84.0
MS.gene51190.t1 MTR_0760s0010 26.441 295 179 11 13 295 52 320 1.34e-17 84.0
MS.gene51190.t1 MTR_6g461660 26.173 405 222 18 7 360 18 396 1.35e-17 84.0
MS.gene51190.t1 MTR_4g031770 24.837 306 188 12 7 293 3 285 1.38e-17 83.6
MS.gene51190.t1 MTR_3g006570 25.000 304 191 13 8 295 21 303 1.43e-17 83.6
MS.gene51190.t1 MTR_3g024040 25.839 298 179 11 15 299 38 306 1.56e-17 83.6
MS.gene51190.t1 MTR_7g079640 27.457 346 213 14 4 326 9 339 1.76e-17 83.2
MS.gene51190.t1 MTR_0464s0020 25.797 345 194 11 8 305 23 352 1.85e-17 83.6
MS.gene51190.t1 MTR_8g039500 26.346 353 210 16 7 329 11 343 2.09e-17 82.8
MS.gene51190.t1 MTR_6g090180 23.929 397 255 13 7 362 46 436 2.17e-17 83.6
MS.gene51190.t1 MTR_2g047892 23.664 393 245 12 6 359 20 396 2.29e-17 83.2
MS.gene51190.t1 MTR_4g117550 24.682 393 218 16 7 360 16 369 2.39e-17 82.8
MS.gene51190.t1 MTR_6g048120 24.756 307 198 10 8 295 36 328 2.62e-17 83.2
MS.gene51190.t1 MTR_2g426020 24.603 378 243 15 7 360 5 364 2.66e-17 83.2
MS.gene51190.t1 MTR_6g034720 44.737 114 59 4 128 239 53 164 2.89e-17 80.1
MS.gene51190.t1 MTR_2g046830 26.948 308 197 13 8 304 25 315 2.90e-17 82.8
MS.gene51190.t1 MTR_7g062060 24.620 329 209 11 8 301 12 336 3.23e-17 82.8
MS.gene51190.t1 MTR_3g011120 26.437 348 211 16 7 326 13 343 3.42e-17 82.4
MS.gene51190.t1 MTR_4g030830 22.000 400 249 12 8 359 9 393 4.09e-17 82.4
MS.gene51190.t1 MTR_7g056003 26.647 334 188 12 10 305 17 331 4.47e-17 82.4
MS.gene51190.t1 MTR_5g046260 24.658 292 180 9 8 299 4 255 4.71e-17 81.3
MS.gene51190.t1 MTR_7g445890 26.331 357 187 15 6 317 14 339 4.86e-17 82.0
MS.gene51190.t1 MTR_7g066030 25.000 404 245 15 1 360 14 403 5.00e-17 82.0
MS.gene51190.t1 MTR_5g096710 25.223 337 210 12 6 317 21 340 5.03e-17 82.0
MS.gene51190.t1 MTR_2g021050 25.915 328 197 12 8 314 5 307 5.16e-17 82.0
MS.gene51190.t1 MTR_6g017280 23.796 353 219 11 3 317 4 344 5.26e-17 82.0
MS.gene51190.t1 MTR_2g021800 24.020 408 246 15 7 360 15 412 6.11e-17 82.0
MS.gene51190.t1 MTR_8g041270 22.963 405 245 12 7 360 14 402 6.19e-17 82.0
MS.gene51190.t1 MTR_3g072470 25.723 346 185 12 8 305 19 340 6.96e-17 82.0
MS.gene51190.t1 MTR_3g030350 25.249 301 199 13 8 299 35 318 7.89e-17 81.6
MS.gene51190.t1 MTR_7g060960 28.205 312 173 12 2 299 26 300 9.19e-17 81.3
MS.gene51190.t1 MTR_1g112930 25.839 298 185 12 8 292 25 299 9.35e-17 81.3
MS.gene51190.t1 MTR_0627s0010 25.294 340 189 12 8 298 38 361 9.90e-17 81.3
MS.gene51190.t1 MTR_7g077970 26.220 328 188 11 8 293 7 322 1.16e-16 81.3
MS.gene51190.t1 MTR_3g006500 23.360 381 227 15 8 351 17 369 1.30e-16 80.9
MS.gene51190.t1 MTR_7g055987 27.457 346 179 15 10 315 22 335 1.46e-16 80.5
MS.gene51190.t1 MTR_7g022600 26.034 411 237 15 6 359 21 421 1.50e-16 80.9
MS.gene51190.t1 MTR_4g023430 50.633 79 38 1 3 80 36 114 1.68e-16 78.2
MS.gene51190.t1 MTR_1g442850 26.012 346 211 13 10 322 7 340 2.22e-16 80.1
MS.gene51190.t1 MTR_2g021770 25.728 412 233 17 5 360 9 403 2.26e-16 80.1
MS.gene51190.t1 MTR_3g030310 24.759 311 188 11 8 295 21 308 3.12e-16 79.7
MS.gene51190.t1 MTR_4g013180 22.923 349 219 10 8 317 11 348 3.20e-16 80.1
MS.gene51190.t1 MTR_8g073550 29.952 207 104 7 8 193 30 216 3.24e-16 77.4
MS.gene51190.t1 MTR_4g037465 25.217 345 207 16 8 317 21 349 3.70e-16 79.7
MS.gene51190.t1 MTR_2g461450 25.817 306 195 12 6 301 16 299 3.96e-16 79.3
MS.gene51190.t1 MTR_2g021252 23.871 310 194 12 11 307 50 330 4.02e-16 79.3
MS.gene51190.t1 MTR_7g066850 24.198 343 176 11 6 301 21 326 4.81e-16 79.7
MS.gene51190.t1 MTR_2g031720 25.130 386 223 17 8 365 6 353 5.14e-16 79.0
MS.gene51190.t1 MTR_8g012090 24.784 347 207 12 7 329 15 331 5.82e-16 78.6
MS.gene51190.t1 MTR_2g425980 24.921 317 198 13 8 295 5 310 5.86e-16 79.0
MS.gene51190.t1 MTR_4g014370 22.384 411 247 14 7 360 10 405 5.99e-16 79.0
MS.gene51190.t1 MTR_8g063440 23.760 383 249 12 7 360 11 379 6.00e-16 79.0
MS.gene51190.t1 MTR_7g016930 24.510 306 198 10 7 294 15 305 6.10e-16 78.2
MS.gene51190.t1 MTR_7g055930 25.464 377 206 15 8 317 13 381 6.49e-16 79.0
MS.gene51190.t1 MTR_4g024890 22.840 324 208 9 9 306 11 318 7.24e-16 78.6
MS.gene51190.t1 MTR_3g010390 26.852 324 184 16 8 298 33 336 7.46e-16 78.6
MS.gene51190.t1 MTR_5g096630 23.077 377 239 14 6 336 16 387 7.87e-16 78.6
MS.gene51190.t1 MTR_5g027330 24.925 333 194 17 12 310 44 354 9.05e-16 78.6
MS.gene51190.t1 MTR_7g055870 25.199 377 207 15 8 317 13 381 9.12e-16 78.6
MS.gene51190.t1 MTR_2g426090 25.161 310 206 12 6 295 5 308 9.25e-16 78.6
MS.gene51190.t1 MTR_8g063330 25.688 327 194 12 6 295 12 326 1.01e-15 78.6
MS.gene51190.t1 MTR_1g114700 26.710 307 182 13 8 293 29 313 1.03e-15 78.2
MS.gene51190.t1 MTR_0242s0060 26.625 323 193 9 6 293 7 320 1.03e-15 78.6
MS.gene51190.t1 MTR_0242s0040 26.625 323 193 9 6 293 7 320 1.03e-15 78.6
MS.gene51190.t1 MTR_4g129190 24.022 358 214 12 4 317 2 345 1.26e-15 77.8
MS.gene51190.t1 MTR_5g027370 24.925 333 194 17 12 310 33 343 1.28e-15 78.2
MS.gene51190.t1 MTR_7g061090 25.672 335 195 12 6 301 20 339 1.59e-15 77.8
MS.gene51190.t1 MTR_5g043160 26.359 368 195 17 10 314 52 406 1.63e-15 77.8
MS.gene51190.t1 MTR_4g028660 23.308 399 247 17 7 362 15 397 1.71e-15 77.4
MS.gene51190.t1 MTR_4g027450 23.308 399 247 17 7 362 15 397 1.71e-15 77.4
MS.gene51190.t1 MTR_2g066170 26.554 354 217 16 7 329 11 352 1.89e-15 77.4
MS.gene51190.t1 MTR_5g072060 26.801 347 216 14 5 326 3 336 2.06e-15 78.2
MS.gene51190.t1 MTR_3g011060 25.000 320 183 15 8 295 28 322 2.12e-15 77.4
MS.gene51190.t1 MTR_8g099460 24.416 385 235 15 6 365 3 356 2.19e-15 77.4
MS.gene51190.t1 MTR_5g010660 24.359 312 184 12 7 296 33 314 2.52e-15 77.4
MS.gene51190.t1 MTR_4g080200 27.097 310 180 14 6 296 1 283 2.54e-15 76.6
MS.gene51190.t1 MTR_7g056170 25.341 367 196 13 6 317 73 416 2.81e-15 77.4
MS.gene51190.t1 MTR_4g006350 24.786 351 204 13 8 315 494 827 3.21e-15 77.8
MS.gene51190.t1 MTR_5g037680 23.810 378 227 13 1 336 1 359 3.26e-15 77.0
MS.gene51190.t1 MTR_4g129160 25.469 373 198 16 8 318 7 361 3.27e-15 76.6
MS.gene51190.t1 MTR_3g464500 23.333 360 199 12 8 317 27 359 3.59e-15 76.6
MS.gene51190.t1 MTR_3g010430 23.602 322 175 13 8 295 36 320 3.70e-15 76.6
MS.gene51190.t1 MTR_3g036335 23.057 386 231 16 8 359 41 394 4.06e-15 76.3
MS.gene51190.t1 MTR_0097s0030 25.220 341 209 12 6 317 12 335 5.25e-15 76.3
MS.gene51190.t1 MTR_2g047240 25.220 341 209 12 6 317 12 335 5.25e-15 76.3
MS.gene51190.t1 MTR_8g062660 24.601 313 182 14 8 291 22 309 5.29e-15 76.6
MS.gene51190.t1 MTR_8g064890 26.230 366 219 19 5 336 13 361 5.98e-15 75.9
MS.gene51190.t1 MTR_2g078850 25.753 299 188 12 11 295 33 311 7.93e-15 75.5
MS.gene51190.t1 MTR_2g026010 28.986 207 133 9 102 295 90 295 9.37e-15 75.5
MS.gene51190.t1 MTR_3g009250 31.250 224 116 11 11 220 44 243 9.77e-15 73.6
MS.gene51190.t1 MTR_3g011650 28.251 223 125 8 11 220 82 282 1.07e-14 73.9
MS.gene51190.t1 MTR_1g007410 23.669 338 189 12 7 295 21 338 1.15e-14 75.1
MS.gene51190.t1 MTR_7g052150 26.074 326 183 14 8 300 22 322 1.26e-14 75.1
MS.gene51190.t1 MTR_5g068040 25.387 323 179 12 8 300 16 306 1.78e-14 74.3
MS.gene51190.t1 MTR_7g078040 25.073 343 202 12 6 301 7 341 2.06e-14 74.3
MS.gene51190.t1 MTR_5g008530 57.895 57 23 1 6 62 16 71 2.23e-14 68.2
MS.gene51190.t1 MTR_8g046310 26.494 385 229 16 7 361 15 375 2.38e-14 73.9
MS.gene51190.t1 MTR_4g030110 23.861 373 194 15 2 322 24 358 2.45e-14 73.9
MS.gene51190.t1 MTR_7g077070 24.706 340 210 13 1 299 9 343 2.50e-14 74.3
MS.gene51190.t1 MTR_2g031680 23.934 305 195 9 8 295 6 290 2.66e-14 73.9
MS.gene51190.t1 MTR_4g033495 24.688 320 201 12 8 299 27 334 2.86e-14 73.9
MS.gene51190.t1 MTR_2g006360 29.180 305 157 16 2 300 41 292 3.19e-14 73.6
MS.gene51190.t1 MTR_6g048140 25.321 312 184 13 8 295 39 325 3.19e-14 73.9
MS.gene51190.t1 MTR_1g056710 26.953 256 159 13 6 247 32 273 3.44e-14 73.6
MS.gene51190.t1 MTR_3g007300 26.246 301 168 13 8 299 49 304 3.68e-14 73.6
MS.gene51190.t1 MTR_2g022000 24.000 400 247 14 7 356 15 407 3.93e-14 73.6
MS.gene51190.t1 MTR_4g013185 24.269 342 193 11 10 299 12 339 4.23e-14 73.6
MS.gene51190.t1 MTR_6g013270 25.581 301 194 12 8 293 29 314 5.49e-14 73.2
MS.gene51190.t1 MTR_3g058480 25.483 259 160 9 8 247 39 283 6.63e-14 72.4
MS.gene51190.t1 MTR_3g464470 21.690 355 208 10 8 317 7 336 6.91e-14 72.8
MS.gene51190.t1 MTR_4g011660 24.286 350 191 13 6 301 17 346 7.31e-14 72.8
MS.gene51190.t1 MTR_6g016285 25.373 335 192 14 6 299 19 336 7.48e-14 72.8
MS.gene51190.t1 MTR_4g030090 24.149 323 201 13 9 301 15 323 7.98e-14 72.4
MS.gene51190.t1 MTR_7g091640 26.586 331 199 15 2 301 29 346 9.59e-14 72.0
MS.gene51190.t1 MTR_7g078900 24.471 331 204 9 10 301 14 337 1.01e-13 72.4
MS.gene51190.t1 MTR_5g009060 26.506 332 184 15 8 295 25 340 1.18e-13 72.0
MS.gene51190.t1 MTR_7g050480 25.617 324 184 12 1 293 15 312 1.24e-13 72.0
MS.gene51190.t1 MTR_2g021210 23.625 309 205 11 8 307 84 370 1.34e-13 72.0
MS.gene51190.t1 MTR_5g057643 28.111 217 136 7 8 215 46 251 1.39e-13 70.5
MS.gene51190.t1 MTR_5g048160 25.495 404 233 18 7 360 3 388 1.63e-13 71.6
MS.gene51190.t1 MTR_5g056020 24.819 415 238 18 8 359 17 420 2.63e-13 71.2
MS.gene51190.t1 MTR_2g031640 23.642 313 189 12 8 295 6 293 2.69e-13 70.9
MS.gene51190.t1 MTR_7g090810 21.795 312 216 9 7 298 39 342 3.35e-13 70.9
MS.gene51190.t1 MTR_0649s0020 23.636 330 196 9 8 301 11 320 3.53e-13 70.5
MS.gene51190.t1 MTR_7g056710 26.211 351 191 16 8 317 18 341 3.75e-13 70.5
MS.gene51190.t1 MTR_7g056200 23.229 353 192 12 6 317 21 335 3.91e-13 70.5
MS.gene51190.t1 MTR_4g028750 23.836 365 223 17 6 329 14 364 4.98e-13 70.1
MS.gene51190.t1 MTR_3g010870 27.315 216 138 8 8 218 37 238 1.05e-12 68.6
MS.gene51190.t1 MTR_2g104280 23.020 404 246 13 7 360 13 401 1.11e-12 68.9
MS.gene51190.t1 MTR_8g066440 24.534 322 210 10 9 301 24 341 1.30e-12 68.9
MS.gene51190.t1 MTR_0054s0090 21.266 395 244 13 16 360 25 402 1.34e-12 68.9
MS.gene51190.t1 MTR_7g061010 27.246 334 179 16 1 299 15 319 1.58e-12 68.6
MS.gene51190.t1 MTR_7g056760 23.739 337 196 13 6 301 21 337 1.68e-12 68.6
MS.gene51190.t1 MTR_1g068905 27.068 266 161 9 8 266 4 243 2.45e-12 67.4
MS.gene51190.t1 MTR_6g004210 24.036 337 192 14 19 311 36 352 2.68e-12 68.2
MS.gene51190.t1 MTR_2g047878 24.377 361 213 12 8 342 21 347 2.92e-12 67.8
MS.gene51190.t1 MTR_6g080680 23.416 363 243 11 6 340 17 372 3.36e-12 67.8
MS.gene51190.t1 MTR_5g046280 25.000 184 119 7 118 299 22 188 4.32e-12 65.9
MS.gene51190.t1 MTR_0129s0070 24.370 357 226 13 7 329 16 362 4.98e-12 67.0
MS.gene51190.t1 MTR_5g057040 27.962 211 132 8 8 209 46 245 5.03e-12 67.8
MS.gene51190.t1 MTR_3g058470 23.907 343 198 10 8 328 37 338 5.81e-12 66.6
MS.gene51190.t1 MTR_7g050520 25.378 331 176 12 1 293 15 312 6.15e-12 66.6
MS.gene51190.t1 MTR_4g019990 23.739 337 204 12 8 308 6 325 7.76e-12 66.6
MS.gene51190.t1 MTR_3g058440 25.000 260 158 9 8 247 35 277 8.08e-12 65.9
MS.gene51190.t1 MTR_7g077990 24.924 329 187 9 6 299 15 318 8.46e-12 66.2
MS.gene51190.t1 MTR_2g078870 25.140 179 111 7 118 295 78 234 9.59e-12 65.5
MS.gene51190.t1 MTR_7g056260 23.214 336 182 13 8 299 14 317 1.14e-11 65.5
MS.gene51190.t1 MTR_2g033410 24.407 295 182 10 9 285 10 281 1.16e-11 65.9
MS.gene51190.t1 MTR_3g024130 28.436 211 124 12 100 299 58 252 1.16e-11 65.5
MS.gene51190.t1 MTR_4g016000 28.421 190 104 9 120 295 2 173 1.21e-11 63.9
MS.gene51190.t1 MTR_7g078840 23.276 348 203 10 6 299 8 345 1.28e-11 65.9
MS.gene51190.t1 MTR_8g054320 27.027 185 109 6 118 299 78 239 1.38e-11 65.1
MS.gene51190.t1 MTR_6g017305 25.439 228 140 6 116 317 15 238 1.86e-11 64.3
MS.gene51190.t1 MTR_4g130330 26.061 330 193 16 6 295 5 323 2.20e-11 65.1
MS.gene51190.t1 MTR_7g445750 25.362 276 170 8 6 249 21 292 2.24e-11 64.7
MS.gene51190.t1 MTR_4g013175 25.269 372 210 17 6 317 8 371 3.43e-11 64.7
MS.gene51190.t1 MTR_0054s0100 20.792 404 251 14 7 358 16 402 3.77e-11 64.3
MS.gene51190.t1 MTR_3g007390 28.846 156 96 6 148 298 1 146 3.78e-11 62.4
MS.gene51190.t1 MTR_5g056990 28.571 154 98 6 148 299 34 177 3.91e-11 63.2
MS.gene51190.t1 MTR_1g055145 41.860 86 50 0 11 96 36 121 6.58e-11 62.8
MS.gene51190.t1 MTR_7g066010 22.951 366 182 15 1 317 14 328 7.92e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51190.t1 AT3G06240 27.945 365 208 13 8 329 36 388 5.08e-27 111
MS.gene51190.t1 AT4G12560 27.832 309 191 11 8 295 4 301 1.24e-24 104
MS.gene51190.t1 AT4G12560 27.832 309 191 11 8 295 4 301 1.24e-24 104
MS.gene51190.t1 AT4G12560 27.832 309 191 11 8 295 4 301 1.24e-24 104
MS.gene51190.t1 AT4G22390 25.166 302 202 10 9 295 5 297 1.33e-21 95.5
MS.gene51190.t1 AT4G22390 25.166 302 202 10 9 295 5 297 1.34e-21 95.5
MS.gene51190.t1 AT3G23880 29.431 299 185 11 7 293 13 297 1.25e-20 92.4
MS.gene51190.t1 AT1G33530 26.885 305 177 12 5 294 94 367 6.62e-16 79.0
MS.gene51190.t1 AT5G49610 26.733 303 183 10 3 289 4 283 3.29e-15 76.6
MS.gene51190.t1 AT3G16210 25.641 312 171 14 8 301 5 273 4.55e-15 76.3
MS.gene51190.t1 AT3G07870 24.798 371 215 17 8 339 28 373 1.55e-12 68.9
MS.gene51190.t1 AT3G21120 23.864 264 160 11 6 248 1 244 5.29e-12 67.0
MS.gene51190.t1 AT4G21240 23.839 323 195 14 8 308 36 329 1.65e-11 65.5
MS.gene51190.t1 AT5G62660 25.360 347 195 16 7 317 40 358 2.26e-11 65.1
MS.gene51190.t1 AT2G40910 21.523 302 198 12 7 280 61 351 6.67e-11 63.9
MS.gene51190.t1 AT2G40910 21.523 302 198 12 7 280 68 358 6.90e-11 63.9

Find 76 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGAGTGGCGGTGATATAAT+TGG 0.222533 7.3:-27689133 MS.gene51190:CDS
TTCAAGGTGCTCTATGGTTT+TGG 0.240782 7.3:-27689631 MS.gene51190:CDS
TTGGTATTTCGCGGACTTAT+CGG 0.247915 7.3:-27689283 MS.gene51190:CDS
CCTGGTTCTTGTCCTGAGAT+TGG 0.261520 7.3:-27689784 MS.gene51190:CDS
TCTTGAATGGTTCTATTCAT+TGG 0.308230 7.3:-27689432 MS.gene51190:CDS
CCGCCACTCGTAAAGCATAC+TGG 0.321813 7.3:+27689145 None:intergenic
TCTTCCTGAAGAAGTGATTA+AGG 0.326542 7.3:-27690043 MS.gene51190:CDS
TGCATCAAAATCTATGGATA+TGG 0.333047 7.3:+27689858 None:intergenic
AATACCTTCAAGGTGCTCTA+TGG 0.342466 7.3:-27689637 MS.gene51190:CDS
AAGAGATGCATCAAAATCTA+TGG 0.347096 7.3:+27689852 None:intergenic
TAAGCTTGCTCAATGTAATC+AGG 0.350722 7.3:+27688983 None:intergenic
ATTTCCTTAATCACTTCTTC+AGG 0.363932 7.3:+27690039 None:intergenic
AAATCTATGGATATGGCTTT+AGG 0.364398 7.3:+27689865 None:intergenic
GAACAGGTGGCAATAGTTAT+AGG 0.367199 7.3:+27689667 None:intergenic
CGAAAATGAGAGGTACTATA+AGG 0.374428 7.3:+27689472 None:intergenic
CTCTGTATACACCGCCATTT+GGG 0.377469 7.3:+27689021 None:intergenic
AGAGTTCTAAAATTAAGATA+TGG 0.380976 7.3:-27689246 MS.gene51190:CDS
GAATGGTTCTATTCATTGGC+TGG 0.382596 7.3:-27689428 MS.gene51190:CDS
AATGCACAAAAGTCTATGTT+TGG 0.394996 7.3:+27689900 None:intergenic
GGAAATACTGCTGAAGTTGC+CGG 0.396842 7.3:-27690022 MS.gene51190:CDS
ACTCTGTATACACCGCCATT+TGG 0.406867 7.3:+27689020 None:intergenic
TATTATTGCCTTTGATATGA+AGG 0.415721 7.3:-27689377 MS.gene51190:CDS
AGAGTTGGGTCGTTCTTGAA+TGG 0.417419 7.3:-27689445 MS.gene51190:CDS
CGCCACTCGTAAAGCATACT+GGG 0.421445 7.3:+27689146 None:intergenic
GAAGGTATTGGTAGTGGAAC+AGG 0.431110 7.3:+27689651 None:intergenic
TTCGCGGACTTATCGGTGTA+TGG 0.431111 7.3:-27689276 MS.gene51190:CDS
TATCTATGGGATCCATCCAC+TGG 0.437922 7.3:-27689715 MS.gene51190:CDS
TTCCACTACCAATACCTTCA+AGG 0.447526 7.3:-27689647 MS.gene51190:CDS
TCTCATTGAGAGCTAATAAG+TGG 0.462649 7.3:-27689522 MS.gene51190:CDS
TATGATTTGTTGGTATTTCG+CGG 0.474638 7.3:-27689292 MS.gene51190:CDS
GGTTCTTGTCCTGAGATTGG+AGG 0.478976 7.3:-27689781 MS.gene51190:CDS
AATACACAGTGCATTCATCT+TGG 0.480902 7.3:-27689213 MS.gene51190:CDS
ACTAATCTACCATCAGCAAT+TGG 0.483472 7.3:+27689109 None:intergenic
ATAGAGCACCTTGAAGGTAT+TGG 0.489050 7.3:+27689639 None:intergenic
CACCTTGAAGGTATTGGTAG+TGG 0.489065 7.3:+27689645 None:intergenic
GAGTTCTAAAATTAAGATAT+GGG 0.492351 7.3:-27689245 MS.gene51190:CDS
CTACAGTAACCTCCAATCTC+AGG 0.499236 7.3:+27689772 None:intergenic
GCAAGTGCGTCTGTAAGTTA+TGG 0.505376 7.3:-27689981 MS.gene51190:CDS
GGTATCTAATTCAATTGACT+TGG 0.514361 7.3:-27689551 MS.gene51190:CDS
TTGAATTAGATACCTCATGA+TGG 0.516344 7.3:+27689560 None:intergenic
AAAACCATAGAGCACCTTGA+AGG 0.516661 7.3:+27689633 None:intergenic
CTGCTAGAGTATCACTCCTA+TGG 0.517498 7.3:-27689064 MS.gene51190:CDS
CAAAAGTCTATGTTTGGTTG+AGG 0.523023 7.3:+27689906 None:intergenic
GGCAATAATAACATCCCTAT+CGG 0.524249 7.3:+27689390 None:intergenic
AGATTGGAGGTTACTGTAGA+GGG 0.524260 7.3:-27689768 MS.gene51190:CDS
AAGTGGAAACAACTTGAGCT+TGG 0.531120 7.3:-27689505 MS.gene51190:CDS
CACCGTAGCACAGACTTCAC+CGG 0.537284 7.3:+27690003 None:intergenic
TTTATAATTATCAAACCGAT+AGG 0.537428 7.3:-27689405 MS.gene51190:CDS
TGATGATTACATTGTAGTTG+TGG 0.551299 7.3:-27689593 MS.gene51190:CDS
TGTCATATCCTTCATATCAA+AGG 0.557886 7.3:+27689369 None:intergenic
CGTTTGCTGACACCAGTGGA+TGG 0.558295 7.3:+27689703 None:intergenic
TATTCGTTTGCTGACACCAG+TGG 0.561491 7.3:+27689699 None:intergenic
CAATGTAATCATCAGTTGAC+TGG 0.565919 7.3:+27689602 None:intergenic
GATGATTACATTGTAGTTGT+GGG 0.566894 7.3:-27689592 MS.gene51190:CDS
GAGATTGGAGGTTACTGTAG+AGG 0.571194 7.3:-27689769 MS.gene51190:CDS
AACCAGGAAGCAGAAAATCA+AGG 0.572133 7.3:+27689800 None:intergenic
AAGCTTGCTCAATGTAATCA+GGG 0.572538 7.3:+27688984 None:intergenic
TTATAATTATCAAACCGATA+GGG 0.574064 7.3:-27689404 MS.gene51190:CDS
CCAGTATGCTTTACGAGTGG+CGG 0.574446 7.3:-27689145 MS.gene51190:CDS
TGAATTAGATACCTCATGAT+GGG 0.584377 7.3:+27689561 None:intergenic
GGCAATAGTTATAGGAGACA+CGG 0.585266 7.3:+27689675 None:intergenic
TCCCCAGTATGCTTTACGAG+TGG 0.588263 7.3:-27689148 MS.gene51190:CDS
CCAATCTCAGGACAAGAACC+AGG 0.590417 7.3:+27689784 None:intergenic
TTCAAGAACGACCCAACTCT+AGG 0.591167 7.3:+27689448 None:intergenic
AGATACCTCATGATGGGTGT+AGG 0.593183 7.3:+27689567 None:intergenic
TGCCGGTGAAGTCTGTGCTA+CGG 0.611026 7.3:-27690005 MS.gene51190:CDS
AAATGTGAAGTTGCAAAATG+AGG 0.620704 7.3:+27689940 None:intergenic
TCTATGGATATGGCTTTAGG+AGG 0.624573 7.3:+27689868 None:intergenic
GCAATAGTTATAGGAGACAC+GGG 0.645466 7.3:+27689676 None:intergenic
GGTATTGGTAGTGGAACAGG+TGG 0.645920 7.3:+27689654 None:intergenic
AACTCTAGGACGAAAATGAG+AGG 0.664352 7.3:+27689462 None:intergenic
ATAATTGGACCAATTGCTGA+TGG 0.668643 7.3:-27689118 MS.gene51190:CDS
GGGGTCCTACACCCATCATG+AGG 0.674451 7.3:-27689572 MS.gene51190:CDS
ATGATTACATTGTAGTTGTG+GGG 0.675645 7.3:-27689591 MS.gene51190:CDS
TAGGAGTGATACTCTAGCAG+CGG 0.680152 7.3:+27689067 None:intergenic
GCCACTCGTAAAGCATACTG+GGG 0.732668 7.3:+27689147 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAGAATTTATGATTTGT+TGG - chr7.3:27689743-27689762 MS.gene51190:CDS 15.0%
!! TAATCACTATAAAAATCATC+TGG + chr7.3:27689720-27689739 None:intergenic 20.0%
!! TTATAATTATCAAACCGATA+GGG - chr7.3:27689641-27689660 MS.gene51190:CDS 20.0%
!! TTTATAATTATCAAACCGAT+AGG - chr7.3:27689640-27689659 MS.gene51190:CDS 20.0%
!!! AGAGTTCTAAAATTAAGATA+TGG - chr7.3:27689799-27689818 MS.gene51190:CDS 20.0%
!!! GAGTTCTAAAATTAAGATAT+GGG - chr7.3:27689800-27689819 MS.gene51190:CDS 20.0%
!!! TTACACAGATTTTTATCTAT+GGG - chr7.3:27689317-27689336 MS.gene51190:CDS 20.0%
! TAAAAAGTAACAATCACCAT+AGG + chr7.3:27690000-27690019 None:intergenic 25.0%
! TATTATTGCCTTTGATATGA+AGG - chr7.3:27689668-27689687 MS.gene51190:CDS 25.0%
!! GTTACACAGATTTTTATCTA+TGG - chr7.3:27689316-27689335 MS.gene51190:CDS 25.0%
!!! TTACTTTTTAGAATCCCAAA+TGG - chr7.3:27690010-27690029 MS.gene51190:CDS 25.0%
AAATCTATGGATATGGCTTT+AGG + chr7.3:27689183-27689202 None:intergenic 30.0%
AAATGTGAAGTTGCAAAATG+AGG + chr7.3:27689108-27689127 None:intergenic 30.0%
AAGAGATGCATCAAAATCTA+TGG + chr7.3:27689196-27689215 None:intergenic 30.0%
AATGCACAAAAGTCTATGTT+TGG + chr7.3:27689148-27689167 None:intergenic 30.0%
ATGATTACATTGTAGTTGTG+GGG - chr7.3:27689454-27689473 MS.gene51190:CDS 30.0%
ATTTCCTTAATCACTTCTTC+AGG + chr7.3:27689009-27689028 None:intergenic 30.0%
GATGATTACATTGTAGTTGT+GGG - chr7.3:27689453-27689472 MS.gene51190:CDS 30.0%
GGTATCTAATTCAATTGACT+TGG - chr7.3:27689494-27689513 MS.gene51190:CDS 30.0%
TGAATTAGATACCTCATGAT+GGG + chr7.3:27689487-27689506 None:intergenic 30.0%
TGATGATTACATTGTAGTTG+TGG - chr7.3:27689452-27689471 MS.gene51190:CDS 30.0%
TGCATCAAAATCTATGGATA+TGG + chr7.3:27689190-27689209 None:intergenic 30.0%
TGTCATATCCTTCATATCAA+AGG + chr7.3:27689679-27689698 None:intergenic 30.0%
TTGAATTAGATACCTCATGA+TGG + chr7.3:27689488-27689507 None:intergenic 30.0%
! TCTTGAATGGTTCTATTCAT+TGG - chr7.3:27689613-27689632 MS.gene51190:CDS 30.0%
!! TATGATTTGTTGGTATTTCG+CGG - chr7.3:27689753-27689772 MS.gene51190:CDS 30.0%
AATACACAGTGCATTCATCT+TGG - chr7.3:27689832-27689851 MS.gene51190:CDS 35.0%
ACTAATCTACCATCAGCAAT+TGG + chr7.3:27689939-27689958 None:intergenic 35.0%
ATAATTGGACCAATTGCTGA+TGG - chr7.3:27689927-27689946 MS.gene51190:CDS 35.0%
CAAAAGTCTATGTTTGGTTG+AGG + chr7.3:27689142-27689161 None:intergenic 35.0%
CAATGTAATCATCAGTTGAC+TGG + chr7.3:27689446-27689465 None:intergenic 35.0%
GGCAATAATAACATCCCTAT+CGG + chr7.3:27689658-27689677 None:intergenic 35.0%
TCTCATTGAGAGCTAATAAG+TGG - chr7.3:27689523-27689542 MS.gene51190:CDS 35.0%
TCTTCCTGAAGAAGTGATTA+AGG - chr7.3:27689002-27689021 MS.gene51190:CDS 35.0%
! AAGCTTGCTCAATGTAATCA+GGG + chr7.3:27690064-27690083 None:intergenic 35.0%
! TAAGCTTGCTCAATGTAATC+AGG + chr7.3:27690065-27690084 None:intergenic 35.0%
!! CGAAAATGAGAGGTACTATA+AGG + chr7.3:27689576-27689595 None:intergenic 35.0%
!!! CTTTTTAGAATCCCAAATGG+CGG - chr7.3:27690013-27690032 MS.gene51190:CDS 35.0%
AACCAGGAAGCAGAAAATCA+AGG + chr7.3:27689248-27689267 None:intergenic 40.0%
AAGTGGAAACAACTTGAGCT+TGG - chr7.3:27689540-27689559 MS.gene51190:CDS 40.0%
AGATTGGAGGTTACTGTAGA+GGG - chr7.3:27689277-27689296 MS.gene51190:CDS 40.0%
GAACAGGTGGCAATAGTTAT+AGG + chr7.3:27689381-27689400 None:intergenic 40.0%
GCAATAGTTATAGGAGACAC+GGG + chr7.3:27689372-27689391 None:intergenic 40.0%
GGCAATAGTTATAGGAGACA+CGG + chr7.3:27689373-27689392 None:intergenic 40.0%
TTCCACTACCAATACCTTCA+AGG - chr7.3:27689398-27689417 MS.gene51190:CDS 40.0%
TTGGTATTTCGCGGACTTAT+CGG - chr7.3:27689762-27689781 MS.gene51190:CDS 40.0%
! AAAACCATAGAGCACCTTGA+AGG + chr7.3:27689415-27689434 None:intergenic 40.0%
! AATACCTTCAAGGTGCTCTA+TGG - chr7.3:27689408-27689427 MS.gene51190:CDS 40.0%
! ATAGAGCACCTTGAAGGTAT+TGG + chr7.3:27689409-27689428 None:intergenic 40.0%
! CTCATTTTCGTCCTAGAGTT+GGG - chr7.3:27689586-27689605 MS.gene51190:CDS 40.0%
! GAATGGTTCTATTCATTGGC+TGG - chr7.3:27689617-27689636 MS.gene51190:CDS 40.0%
! TCTCATTTTCGTCCTAGAGT+TGG - chr7.3:27689585-27689604 MS.gene51190:CDS 40.0%
!! AACTCTAGGACGAAAATGAG+AGG + chr7.3:27689586-27689605 None:intergenic 40.0%
!! TCTATGGATATGGCTTTAGG+AGG + chr7.3:27689180-27689199 None:intergenic 40.0%
!! TTCAAGGTGCTCTATGGTTT+TGG - chr7.3:27689414-27689433 MS.gene51190:CDS 40.0%
!! TTTCTCTTTTGATTCCGCAC+TGG - chr7.3:27689869-27689888 MS.gene51190:CDS 40.0%
ACGAGTGGCGGTGATATAAT+TGG - chr7.3:27689912-27689931 MS.gene51190:CDS 45.0%
ACTCTGTATACACCGCCATT+TGG + chr7.3:27690028-27690047 None:intergenic 45.0%
AGAGTTGGGTCGTTCTTGAA+TGG - chr7.3:27689600-27689619 MS.gene51190:CDS 45.0%
CTACAGTAACCTCCAATCTC+AGG + chr7.3:27689276-27689295 None:intergenic 45.0%
CTCTGTATACACCGCCATTT+GGG + chr7.3:27690027-27690046 None:intergenic 45.0%
GAGATTGGAGGTTACTGTAG+AGG - chr7.3:27689276-27689295 MS.gene51190:CDS 45.0%
GCAAGTGCGTCTGTAAGTTA+TGG - chr7.3:27689064-27689083 MS.gene51190:CDS 45.0%
GGAAATACTGCTGAAGTTGC+CGG - chr7.3:27689023-27689042 MS.gene51190:CDS 45.0%
TACTGGGGAAAAATCCAGTG+CGG + chr7.3:27689886-27689905 None:intergenic 45.0%
TAGGAGTGATACTCTAGCAG+CGG + chr7.3:27689981-27690000 None:intergenic 45.0%
TATCTATGGGATCCATCCAC+TGG - chr7.3:27689330-27689349 MS.gene51190:CDS 45.0%
TTCAAGAACGACCCAACTCT+AGG + chr7.3:27689600-27689619 None:intergenic 45.0%
! AGCCTTGATTTTCTGCTTCC+TGG - chr7.3:27689243-27689262 MS.gene51190:CDS 45.0%
! CTGCTAGAGTATCACTCCTA+TGG - chr7.3:27689981-27690000 MS.gene51190:CDS 45.0%
! TATTCGTTTGCTGACACCAG+TGG + chr7.3:27689349-27689368 None:intergenic 45.0%
!! AGATACCTCATGATGGGTGT+AGG + chr7.3:27689481-27689500 None:intergenic 45.0%
!! CACCTTGAAGGTATTGGTAG+TGG + chr7.3:27689403-27689422 None:intergenic 45.0%
!! GAAGGTATTGGTAGTGGAAC+AGG + chr7.3:27689397-27689416 None:intergenic 45.0%
CCAATCTCAGGACAAGAACC+AGG + chr7.3:27689264-27689283 None:intergenic 50.0%
CCAGTATGCTTTACGAGTGG+CGG - chr7.3:27689900-27689919 MS.gene51190:CDS 50.0%
CGCCACTCGTAAAGCATACT+GGG + chr7.3:27689902-27689921 None:intergenic 50.0%
GCCACTCGTAAAGCATACTG+GGG + chr7.3:27689901-27689920 None:intergenic 50.0%
GGTTCTTGTCCTGAGATTGG+AGG - chr7.3:27689264-27689283 MS.gene51190:CDS 50.0%
TCCCCAGTATGCTTTACGAG+TGG - chr7.3:27689897-27689916 MS.gene51190:CDS 50.0%
TTCGCGGACTTATCGGTGTA+TGG - chr7.3:27689769-27689788 MS.gene51190:CDS 50.0%
! CCTGGTTCTTGTCCTGAGAT+TGG - chr7.3:27689261-27689280 MS.gene51190:CDS 50.0%
!! GGTATTGGTAGTGGAACAGG+TGG + chr7.3:27689394-27689413 None:intergenic 50.0%
CACCGTAGCACAGACTTCAC+CGG + chr7.3:27689045-27689064 None:intergenic 55.0%
CCGCCACTCGTAAAGCATAC+TGG + chr7.3:27689903-27689922 None:intergenic 55.0%
TGCCGGTGAAGTCTGTGCTA+CGG - chr7.3:27689040-27689059 MS.gene51190:CDS 55.0%
! CGTTTGCTGACACCAGTGGA+TGG + chr7.3:27689345-27689364 None:intergenic 55.0%
GGGGTCCTACACCCATCATG+AGG - chr7.3:27689473-27689492 MS.gene51190:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 27688982 27690085 27688982 ID=MS.gene51190
chr7.3 mRNA 27688982 27690085 27688982 ID=MS.gene51190.t1;Parent=MS.gene51190
chr7.3 exon 27688982 27690085 27688982 ID=MS.gene51190.t1.exon1;Parent=MS.gene51190.t1
chr7.3 CDS 27688982 27690085 27688982 ID=cds.MS.gene51190.t1;Parent=MS.gene51190.t1
Gene Sequence

>MS.gene51190

ATGGCGAACAAATGTGTGCATCTTCCTGAAGAAGTGATTAAGGAAATACTGCTGAAGTTGCCGGTGAAGTCTGTGCTACGGTGCAAGTGCGTCTGTAAGTTATGGCTTTATATCATCTCTCATCCTCATTTTGCAACTTCACATTTTCAACTTGCTGCCTCAACCAAACATAGACTTTTGTGCATTTATTCTTATCCTCCTAAAGCCATATCCATAGATTTTGATGCATCTCTTCAAAATGATTCTGCATTTGTTTCACGAAGCCTTGATTTTCTGCTTCCTGGTTCTTGTCCTGAGATTGGAGGTTACTGTAGAGGGTTTCTGTTTGTGCGTTGTTACACAGATTTTTATCTATGGGATCCATCCACTGGTGTCAGCAAACGAATACCCGTGTCTCCTATAACTATTGCCACCTGTTCCACTACCAATACCTTCAAGGTGCTCTATGGTTTTGGATACAACCAGTCAACTGATGATTACATTGTAGTTGTGGGGTCCTACACCCATCATGAGGTATCTAATTCAATTGACTTGGAGATTTTCTCATTGAGAGCTAATAAGTGGAAACAACTTGAGCTTGGTTTTCATTTGCCTTATAGTACCTCTCATTTTCGTCCTAGAGTTGGGTCGTTCTTGAATGGTTCTATTCATTGGCTGGTTTATAATTATCAAACCGATAGGGATGTTATTATTGCCTTTGATATGAAGGATATGACAATGTCAGAGATTGCTCTTCCAGATGATTTTTATAGTGATTACTCTTTTAGAATTTATGATTTGTTGGTATTTCGCGGACTTATCGGTGTATGGATTGTGAAGAGTTCTAAAATTAAGATATGGGTGATGCAAGAATACACAGTGCATTCATCTTGGACTAAGACTTTTGATTTCTCTTTTGATTCCGCACTGGATTTTTCCCCAGTATGCTTTACGAGTGGCGGTGATATAATTGGACCAATTGCTGATGGTAGATTAGTGAAGCTTAATGACAAAGAACCGCTGCTAGAGTATCACTCCTATGGTGATTGTTACTTTTTAGAATCCCAAATGGCGGTGTATACAGAGTCTCTACTTTCACTCCCTGATTACATTGAGCAAGCTTAA

Protein sequence

>MS.gene51190.t1

MANKCVHLPEEVIKEILLKLPVKSVLRCKCVCKLWLYIISHPHFATSHFQLAASTKHRLLCIYSYPPKAISIDFDASLQNDSAFVSRSLDFLLPGSCPEIGGYCRGFLFVRCYTDFYLWDPSTGVSKRIPVSPITIATCSTTNTFKVLYGFGYNQSTDDYIVVVGSYTHHEVSNSIDLEIFSLRANKWKQLELGFHLPYSTSHFRPRVGSFLNGSIHWLVYNYQTDRDVIIAFDMKDMTMSEIALPDDFYSDYSFRIYDLLVFRGLIGVWIVKSSKIKIWVMQEYTVHSSWTKTFDFSFDSALDFSPVCFTSGGDIIGPIADGRLVKLNDKEPLLEYHSYGDCYFLESQMAVYTESLLSLPDYIEQA