AlfalfaGEDB | MS.gene58316

M. sativa cultivar XinJiangDaYe / MS.gene58316

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58316.t1	AET02110.2	73.2	127	30	2	2	124	238	364	3.50E-44	187.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58316.t1	G7LCP3	73.2	127	30	2	2	124	238	364	2.6e-44	187.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene060366	MS.gene58316	PPI
MS.gene047279	MS.gene58316	PPI
MS.gene58316	MS.gene024420	PPI
MS.gene58316	MS.gene016220	PPI
MS.gene58316	MS.gene024008	PPI
MS.gene48221	MS.gene58316	PPI
MS.gene57529	MS.gene58316	PPI
MS.gene58316	MS.gene053299	PPI
MS.gene80884	MS.gene58316	PPI
MS.gene58316	MS.gene28758	PPI
MS.gene58316	MS.gene27284	PPI
MS.gene041395	MS.gene58316	PPI
MS.gene40886	MS.gene58316	PPI
MS.gene40902	MS.gene58316	PPI
MS.gene03060	MS.gene58316	PPI
MS.gene27051	MS.gene58316	PPI
MS.gene060368	MS.gene58316	PPI
MS.gene033875	MS.gene58316	PPI
MS.gene77704	MS.gene58316	PPI
MS.gene27020	MS.gene58316	PPI
MS.gene066620	MS.gene58316	PPI
MS.gene035236	MS.gene58316	PPI
MS.gene58316	MS.gene51190	PPI
MS.gene86273	MS.gene58316	PPI
MS.gene58316	MS.gene58319	PPI
MS.gene041394	MS.gene58316	PPI
MS.gene059157	MS.gene58316	PPI
MS.gene57525	MS.gene58316	PPI
MS.gene028390	MS.gene58316	PPI
MS.gene011106	MS.gene58316	PPI
MS.gene62398	MS.gene58316	PPI
MS.gene60027	MS.gene58316	PPI
MS.gene58316	MS.gene033442	PPI
MS.gene045475	MS.gene58316	PPI
MS.gene038756	MS.gene58316	PPI
MS.gene88776	MS.gene58316	PPI
MS.gene35068	MS.gene58316	PPI
MS.gene041390	MS.gene58316	PPI
MS.gene90744	MS.gene58316	PPI
MS.gene24286	MS.gene58316	PPI
MS.gene058693	MS.gene58316	PPI
MS.gene92376	MS.gene58316	PPI
MS.gene000035	MS.gene58316	PPI
MS.gene58316	MS.gene44428	PPI
MS.gene50329	MS.gene58316	PPI
MS.gene070462	MS.gene58316	PPI
MS.gene31637	MS.gene58316	PPI
MS.gene87573	MS.gene58316	PPI
MS.gene58316	MS.gene058703	PPI
MS.gene57537	MS.gene58316	PPI
MS.gene42447	MS.gene58316	PPI
MS.gene019504	MS.gene58316	PPI
MS.gene034762	MS.gene58316	PPI
MS.gene064114	MS.gene58316	PPI
MS.gene059156	MS.gene58316	PPI
MS.gene58316	MS.gene024000	PPI
MS.gene82082	MS.gene58316	PPI
MS.gene033444	MS.gene58316	PPI
MS.gene50306	MS.gene58316	PPI
MS.gene066639	MS.gene58316	PPI
MS.gene26949	MS.gene58316	PPI
MS.gene044426	MS.gene58316	PPI
MS.gene012215	MS.gene58316	PPI
MS.gene50309	MS.gene58316	PPI
MS.gene87200	MS.gene58316	PPI
MS.gene58311	MS.gene58316	PPI
MS.gene058669	MS.gene58316	PPI
MS.gene59637	MS.gene58316	PPI
MS.gene26830	MS.gene58316	PPI
MS.gene033432	MS.gene58316	PPI
MS.gene58316	MS.gene50311	PPI
MS.gene59639	MS.gene58316	PPI
MS.gene031590	MS.gene58316	PPI
MS.gene036584	MS.gene58316	PPI
MS.gene50327	MS.gene58316	PPI
MS.gene066635	MS.gene58316	PPI
MS.gene58316	MS.gene57538	PPI
MS.gene035261	MS.gene58316	PPI
MS.gene58316	MS.gene27319	PPI
MS.gene010758	MS.gene58316	PPI
MS.gene96406	MS.gene58316	PPI
MS.gene063670	MS.gene58316	PPI
MS.gene87586	MS.gene58316	PPI
MS.gene57530	MS.gene58316	PPI
MS.gene066626	MS.gene58316	PPI
MS.gene019506	MS.gene58316	PPI
MS.gene50326	MS.gene58316	PPI
MS.gene42451	MS.gene58316	PPI
MS.gene51200	MS.gene58316	PPI
MS.gene54541	MS.gene58316	PPI
MS.gene046958	MS.gene58316	PPI
MS.gene87564	MS.gene58316	PPI
MS.gene88774	MS.gene58316	PPI
MS.gene58316	MS.gene24173	PPI
MS.gene42452	MS.gene58316	PPI
MS.gene40986	MS.gene58316	PPI
MS.gene063414	MS.gene58316	PPI
MS.gene69307	MS.gene58316	PPI
MS.gene009892	MS.gene58316	PPI
MS.gene58316	MS.gene023999	PPI
MS.gene036662	MS.gene58316	PPI
MS.gene87563	MS.gene58316	PPI
MS.gene57526	MS.gene58316	PPI
MS.gene58316	MS.gene69307	PPI
MS.gene021553	MS.gene58316	PPI
MS.gene051820	MS.gene58316	PPI
MS.gene26957	MS.gene58316	PPI
MS.gene97996	MS.gene58316	PPI
MS.gene58316	MS.gene036581	PPI
MS.gene036582	MS.gene58316	PPI
MS.gene27021	MS.gene58316	PPI
MS.gene035235	MS.gene58316	PPI
MS.gene40988	MS.gene58316	PPI
MS.gene58320	MS.gene58316	PPI
MS.gene26101	MS.gene58316	PPI
MS.gene066120	MS.gene58316	PPI
MS.gene27283	MS.gene58316	PPI
MS.gene045140	MS.gene58316	PPI
MS.gene053299	MS.gene58316	PPI
MS.gene58316	MS.gene50320	PPI
MS.gene024004	MS.gene58316	PPI
MS.gene58781	MS.gene58316	PPI
MS.gene42444	MS.gene58316	PPI
MS.gene58316	MS.gene58314	PPI
MS.gene58316	MS.gene87557	PPI
MS.gene57717	MS.gene58316	PPI
MS.gene033440	MS.gene58316	PPI
MS.gene58316	MS.gene035263	PPI
MS.gene44886	MS.gene58316	PPI
MS.gene58316	MS.gene96406	PPI
MS.gene87562	MS.gene58316	PPI
MS.gene066623	MS.gene58316	PPI
MS.gene40904	MS.gene58316	PPI
MS.gene024420	MS.gene58316	PPI
MS.gene87569	MS.gene58316	PPI
MS.gene041491	MS.gene58316	PPI
MS.gene51201	MS.gene58316	PPI
MS.gene88416	MS.gene58316	PPI
MS.gene033443	MS.gene58316	PPI
MS.gene51207	MS.gene58316	PPI
MS.gene58316	MS.gene047279	PPI
MS.gene58316	MS.gene50305	PPI
MS.gene059096	MS.gene58316	PPI
MS.gene57528	MS.gene58316	PPI
MS.gene58316	MS.gene032969	PPI
MS.gene50297	MS.gene58316	PPI
MS.gene006711	MS.gene58316	PPI
MS.gene27285	MS.gene58316	PPI
MS.gene58716	MS.gene58316	PPI
MS.gene68580	MS.gene58316	PPI
MS.gene064091	MS.gene58316	PPI
MS.gene58316	MS.gene42445	PPI
MS.gene019505	MS.gene58316	PPI
MS.gene064112	MS.gene58316	PPI
MS.gene053257	MS.gene58316	PPI
MS.gene045476	MS.gene58316	PPI
MS.gene58785	MS.gene58316	PPI
MS.gene24208	MS.gene58316	PPI
MS.gene58316	MS.gene22715	PPI
MS.gene50307	MS.gene58316	PPI
MS.gene034690	MS.gene58316	PPI
MS.gene044429	MS.gene58316	PPI
MS.gene51189	MS.gene58316	PPI
MS.gene58316	MS.gene63657	PPI
MS.gene85454	MS.gene58316	PPI
MS.gene96407	MS.gene58316	PPI
MS.gene036558	MS.gene58316	PPI
MS.gene58316	MS.gene36595	PPI
MS.gene58316	MS.gene54541	PPI
MS.gene036760	MS.gene58316	PPI
MS.gene77857	MS.gene58316	PPI
MS.gene43790	MS.gene58316	PPI
MS.gene57527	MS.gene58316	PPI
MS.gene51191	MS.gene58316	PPI
MS.gene58316	MS.gene061240	PPI
MS.gene033426	MS.gene58316	PPI
MS.gene035237	MS.gene58316	PPI
MS.gene064086	MS.gene58316	PPI
MS.gene034681	MS.gene58316	PPI
MS.gene033430	MS.gene58316	PPI
MS.gene034677	MS.gene58316	PPI
MS.gene50298	MS.gene58316	PPI
MS.gene58316	MS.gene035234	PPI
MS.gene58316	MS.gene058989	PPI
MS.gene67687	MS.gene58316	PPI
MS.gene58316	MS.gene041468	PPI
MS.gene58316	MS.gene42447	PPI
MS.gene58316	MS.gene024979	PPI
MS.gene71159	MS.gene58316	PPI
MS.gene96448	MS.gene58316	PPI
MS.gene77858	MS.gene58316	PPI
MS.gene058692	MS.gene58316	PPI
MS.gene041392	MS.gene58316	PPI
MS.gene033083	MS.gene58316	PPI
MS.gene58316	MS.gene044425	PPI
MS.gene69309	MS.gene58316	PPI
MS.gene63658	MS.gene58316	PPI
MS.gene024002	MS.gene58316	PPI
MS.gene033081	MS.gene58316	PPI
MS.gene036581	MS.gene58316	PPI
MS.gene035263	MS.gene58316	PPI
MS.gene035262	MS.gene58316	PPI
MS.gene034686	MS.gene58316	PPI
MS.gene58316	MS.gene59637	PPI
MS.gene40982	MS.gene58316	PPI
MS.gene070461	MS.gene58316	PPI
MS.gene003076	MS.gene58316	PPI
MS.gene51199	MS.gene58316	PPI
MS.gene064108	MS.gene58316	PPI
MS.gene58316	MS.gene27022	PPI
MS.gene58315	MS.gene58316	PPI
MS.gene87557	MS.gene58316	PPI
MS.gene030114	MS.gene58316	PPI
MS.gene87559	MS.gene58316	PPI
MS.gene58316	MS.gene024009	PPI
MS.gene036663	MS.gene58316	PPI
MS.gene58316	MS.gene036599	PPI
MS.gene033431	MS.gene58316	PPI
MS.gene064109	MS.gene58316	PPI
MS.gene24212	MS.gene58316	PPI
MS.gene58316	MS.gene006705	PPI
MS.gene041475	MS.gene58316	PPI
MS.gene58316	MS.gene035237	PPI
MS.gene81242	MS.gene58316	PPI
MS.gene64203	MS.gene58316	PPI
MS.gene58316	MS.gene000036	PPI
MS.gene060367	MS.gene58316	PPI
MS.gene51202	MS.gene58316	PPI
MS.gene059101	MS.gene58316	PPI
MS.gene036664	MS.gene58316	PPI
MS.gene58316	MS.gene053257	PPI
MS.gene024011	MS.gene58316	PPI
MS.gene58316	MS.gene51201	PPI
MS.gene58316	MS.gene058696	PPI
MS.gene064111	MS.gene58316	PPI
MS.gene58316	MS.gene009893	PPI
MS.gene87584	MS.gene58316	PPI
MS.gene26829	MS.gene58316	PPI
MS.gene064104	MS.gene58316	PPI
MS.gene40878	MS.gene58316	PPI
MS.gene053256	MS.gene58316	PPI
MS.gene75875	MS.gene58316	PPI
MS.gene54049	MS.gene58316	PPI
MS.gene50337	MS.gene58316	PPI
MS.gene43789	MS.gene58316	PPI
MS.gene006710	MS.gene58316	PPI
MS.gene50332	MS.gene58316	PPI
MS.gene072177	MS.gene58316	PPI
MS.gene58722	MS.gene58316	PPI
MS.gene58316	MS.gene036663	PPI
MS.gene033079	MS.gene58316	PPI
MS.gene061241	MS.gene58316	PPI
MS.gene24213	MS.gene58316	PPI
MS.gene43796	MS.gene58316	PPI
MS.gene58312	MS.gene58316	PPI
MS.gene36704	MS.gene58316	PPI
MS.gene58316	MS.gene023996	PPI
MS.gene58316	MS.gene030114	PPI
MS.gene58316	MS.gene045473	PPI
MS.gene58316	MS.gene50301	PPI
MS.gene58316	MS.gene036558	PPI
MS.gene036556	MS.gene58316	PPI
MS.gene58313	MS.gene58316	PPI
MS.gene066622	MS.gene58316	PPI
MS.gene58316	MS.gene40984	PPI
MS.gene44887	MS.gene58316	PPI
MS.gene85043	MS.gene58316	PPI
MS.gene39265	MS.gene58316	PPI
MS.gene63655	MS.gene58316	PPI
MS.gene44883	MS.gene58316	PPI
MS.gene036583	MS.gene58316	PPI
MS.gene88780	MS.gene58316	PPI
MS.gene41046	MS.gene58316	PPI
MS.gene063472	MS.gene58316	PPI
MS.gene87588	MS.gene58316	PPI
MS.gene055694	MS.gene58316	PPI
MS.gene017412	MS.gene58316	PPI
MS.gene58314	MS.gene58316	PPI
MS.gene51192	MS.gene58316	PPI
MS.gene87585	MS.gene58316	PPI
MS.gene009883	MS.gene58316	PPI
MS.gene58316	MS.gene58240	PPI
MS.gene58317	MS.gene58316	PPI
MS.gene044563	MS.gene58316	PPI
MS.gene069075	MS.gene58316	PPI
MS.gene58316	MS.gene43790	PPI
MS.gene58316	MS.gene034680	PPI
MS.gene033427	MS.gene58316	PPI
MS.gene40985	MS.gene58316	PPI
MS.gene031591	MS.gene58316	PPI
MS.gene041474	MS.gene58316	PPI
MS.gene58321	MS.gene58316	PPI
MS.gene041388	MS.gene58316	PPI
MS.gene062698	MS.gene58316	PPI
MS.gene57536	MS.gene58316	PPI
MS.gene96126	MS.gene58316	PPI
MS.gene019503	MS.gene58316	PPI
MS.gene51208	MS.gene58316	PPI
MS.gene016524	MS.gene58316	PPI
MS.gene58316	MS.gene57532	PPI
MS.gene58316	MS.gene003076	PPI
MS.gene50304	MS.gene58316	PPI
MS.gene041473	MS.gene58316	PPI
MS.gene50336	MS.gene58316	PPI
MS.gene59943	MS.gene58316	PPI
MS.gene51204	MS.gene58316	PPI
MS.gene58783	MS.gene58316	PPI
MS.gene31587	MS.gene58316	PPI
MS.gene036557	MS.gene58316	PPI
MS.gene041393	MS.gene58316	PPI
MS.gene58316	MS.gene058669	PPI
MS.gene033441	MS.gene58316	PPI
MS.gene063474	MS.gene58316	PPI
MS.gene048193	MS.gene58316	PPI
MS.gene58316	MS.gene041489	PPI
MS.gene063826	MS.gene58316	PPI
MS.gene58316	MS.gene38220	PPI
MS.gene84698	MS.gene58316	PPI
MS.gene44892	MS.gene58316	PPI
MS.gene58316	MS.gene03060	PPI
MS.gene009891	MS.gene58316	PPI
MS.gene58239	MS.gene58316	PPI
MS.gene066641	MS.gene58316	PPI
MS.gene58316	MS.gene064109	PPI
MS.gene000038	MS.gene58316	PPI
MS.gene57531	MS.gene58316	PPI
MS.gene58316	MS.gene035238	PPI
MS.gene67501	MS.gene58316	PPI
MS.gene90742	MS.gene58316	PPI
MS.gene58316	MS.gene064114	PPI
MS.gene39262	MS.gene58316	PPI
MS.gene58241	MS.gene58316	PPI
MS.gene58316	MS.gene87584	PPI
MS.gene57535	MS.gene58316	PPI
MS.gene025887	MS.gene58316	PPI
MS.gene019507	MS.gene58316	PPI
MS.gene045474	MS.gene58316	PPI
MS.gene041470	MS.gene58316	PPI
MS.gene058694	MS.gene58316	PPI
MS.gene064090	MS.gene58316	PPI
MS.gene58316	MS.gene80610	PPI
MS.gene058701	MS.gene58316	PPI
MS.gene58319	MS.gene58316	PPI
MS.gene015089	MS.gene58316	PPI
MS.gene90743	MS.gene58316	PPI
MS.gene44885	MS.gene58316	PPI
MS.gene011679	MS.gene58316	PPI
MS.gene060370	MS.gene58316	PPI
MS.gene58316	MS.gene041391	PPI
MS.gene64001	MS.gene58316	PPI
MS.gene57533	MS.gene58316	PPI
MS.gene032970	MS.gene58316	PPI
MS.gene77856	MS.gene58316	PPI
MS.gene24826	MS.gene58316	PPI
MS.gene57532	MS.gene58316	PPI
MS.gene68890	MS.gene58316	PPI
MS.gene40887	MS.gene58316	PPI
MS.gene58316	MS.gene87554	PPI
MS.gene58316	MS.gene064083	PPI
MS.gene50339	MS.gene58316	PPI
MS.gene034688	MS.gene58316	PPI
MS.gene51188	MS.gene58316	PPI
MS.gene58316	MS.gene048193	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58316.t1	MTR_8g433040	73.228	127	30	2	2	124	238	364	5.29e-58	183
MS.gene58316.t1	MTR_8g032380	73.228	127	30	2	2	124	238	364	5.29e-58	183
MS.gene58316.t1	MTR_8g433030	69.919	123	32	2	2	119	215	337	1.05e-51	166
MS.gene58316.t1	MTR_8g032390	69.919	123	32	2	2	119	248	370	2.89e-51	166
MS.gene58316.t1	MTR_3g103020	56.923	130	49	2	2	124	249	378	6.23e-40	137
MS.gene58316.t1	MTR_4g116330	56.061	132	49	2	2	124	249	380	9.99e-40	136
MS.gene58316.t1	MTR_4g023130	57.480	127	48	2	2	123	187	312	1.23e-39	134
MS.gene58316.t1	MTR_8g040935	54.545	132	51	2	2	124	77	208	2.89e-39	130
MS.gene58316.t1	MTR_4g021785	55.469	128	51	2	2	124	229	355	5.42e-39	134
MS.gene58316.t1	MTR_4g109270	55.385	130	51	2	2	124	235	364	6.38e-39	134
MS.gene58316.t1	MTR_4g094365	57.252	131	48	3	2	124	234	364	2.64e-38	132
MS.gene58316.t1	MTR_4g117870	55.469	128	50	3	3	124	141	267	4.24e-38	129
MS.gene58316.t1	MTR_6g060650	54.264	129	50	3	2	123	246	372	4.82e-38	132
MS.gene58316.t1	MTR_6g463430	53.968	126	55	2	2	124	77	202	9.04e-38	127
MS.gene58316.t1	MTR_4g023080	55.118	127	51	2	2	123	228	353	9.98e-38	130
MS.gene58316.t1	MTR_4g023380	50.658	152	46	5	2	124	228	379	3.34e-37	130
MS.gene58316.t1	MTR_4g109280	53.788	132	49	4	2	124	231	359	2.10e-35	124
MS.gene58316.t1	MTR_4g122850	57.895	133	43	6	2	124	235	364	3.32e-35	124
MS.gene58316.t1	MTR_4g023070	48.921	139	53	2	3	123	231	369	7.99e-35	123
MS.gene58316.t1	MTR_4g117720	53.676	136	48	5	2	124	245	378	8.67e-35	123
MS.gene58316.t1	MTR_4g023090	48.611	144	53	4	2	124	243	386	2.88e-34	122
MS.gene58316.t1	MTR_3g034180	54.615	130	49	4	2	124	363	489	3.28e-34	123
MS.gene58316.t1	MTR_4g116320	54.688	128	47	3	2	120	129	254	3.47e-34	119
MS.gene58316.t1	MTR_4g023120	48.571	140	54	2	3	124	231	370	3.58e-34	121
MS.gene58316.t1	MTR_1g055175	48.837	129	58	3	2	123	73	200	8.01e-33	114
MS.gene58316.t1	MTR_4g117850	50.806	124	53	2	2	117	250	373	1.78e-32	117
MS.gene58316.t1	MTR_5g097210	52.756	127	50	4	2	121	237	360	2.22e-32	117
MS.gene58316.t1	MTR_4g118360	52.713	129	46	5	6	123	1	125	2.97e-32	110
MS.gene58316.t1	MTR_4g118370	52.000	125	53	3	2	121	135	257	4.40e-32	114
MS.gene58316.t1	MTR_4g117750	56.481	108	40	2	21	121	373	480	6.33e-32	117
MS.gene58316.t1	MTR_4g117750	51.376	109	46	3	20	123	252	358	1.34e-23	94.7
MS.gene58316.t1	MTR_5g023000	60.204	98	32	2	34	124	2	99	1.45e-31	107
MS.gene58316.t1	MTR_1g055165	48.462	130	59	3	2	124	190	318	2.31e-31	113
MS.gene58316.t1	MTR_4g122860	49.606	127	50	3	9	124	197	320	7.01e-31	112
MS.gene58316.t1	MTR_5g070130	50.758	132	56	4	2	124	246	377	9.06e-31	113
MS.gene58316.t1	MTR_4g117780	55.856	111	42	3	21	124	257	367	2.65e-30	111
MS.gene58316.t1	MTR_4g118380	55.455	110	33	3	2	97	248	355	2.85e-30	111
MS.gene58316.t1	MTR_4g117770	55.856	111	42	3	21	124	257	367	3.01e-30	111
MS.gene58316.t1	MTR_4g117810	55.856	111	42	3	21	124	257	367	3.01e-30	111
MS.gene58316.t1	MTR_5g070080	52.000	125	52	3	2	119	257	380	3.20e-30	111
MS.gene58316.t1	MTR_4g023190	51.538	130	54	4	2	122	228	357	7.29e-29	107
MS.gene58316.t1	MTR_4g023440	60.440	91	31	1	39	124	242	332	2.07e-28	105
MS.gene58316.t1	MTR_4g121580	50.877	114	51	2	2	114	230	339	2.39e-28	106
MS.gene58316.t1	MTR_3g034160	54.688	128	50	3	2	123	249	374	2.71e-28	106
MS.gene58316.t1	MTR_4g116330	53.097	113	44	2	21	124	229	341	4.83e-28	105
MS.gene58316.t1	MTR_3g034130	57.000	100	36	2	2	96	249	346	1.15e-27	104
MS.gene58316.t1	MTR_1g055135	48.507	134	54	6	3	124	245	375	1.22e-27	104
MS.gene58316.t1	MTR_4g023150	49.231	130	57	4	2	122	229	358	6.44e-27	102
MS.gene58316.t1	MTR_7g079450	45.312	128	60	4	3	124	14	137	3.60e-26	95.5
MS.gene58316.t1	MTR_4g023200	48.462	130	58	4	2	122	229	358	4.81e-26	100
MS.gene58316.t1	MTR_4g117530	47.458	118	54	3	12	124	139	253	8.14e-26	97.4
MS.gene58316.t1	MTR_4g118400	61.628	86	26	2	40	118	209	294	9.97e-26	98.2
MS.gene58316.t1	MTR_5g070088	46.970	132	61	4	2	124	255	386	4.18e-25	97.8
MS.gene58316.t1	MTR_1g055195	49.219	128	52	6	2	120	351	474	4.93e-25	98.6
MS.gene58316.t1	MTR_7g079400	45.455	132	58	4	5	124	208	337	8.56e-24	94.0
MS.gene58316.t1	MTR_1g055250	46.087	115	54	3	2	111	142	253	3.41e-23	92.0
MS.gene58316.t1	MTR_8g102520	42.969	128	63	4	5	124	197	322	9.90e-23	90.9
MS.gene58316.t1	MTR_8g098830	41.463	123	62	5	1	118	98	215	8.34e-21	84.0
MS.gene58316.t1	MTR_7g079370	43.307	127	63	4	5	124	232	356	9.26e-20	83.2
MS.gene58316.t1	MTR_4g023430	44.231	104	48	2	31	124	119	222	1.11e-19	80.9
MS.gene58316.t1	MTR_7g117720	45.082	122	49	6	8	118	157	271	4.63e-19	80.1
MS.gene58316.t1	MTR_7g079420	40.625	128	65	5	1	119	1014	1139	5.45e-17	75.9
MS.gene58316.t1	MTR_4g114700	49.425	87	34	2	39	115	132	218	1.13e-16	73.2
MS.gene58316.t1	MTR_4g023100	56.364	55	24	0	70	124	65	119	1.18e-12	60.5
MS.gene58316.t1	MTR_8g013005	56.140	57	23	1	70	124	3	59	6.88e-12	56.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 25 sgRNAs with CRISPR-Local

Find 31 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATAATTGGACAATTGAAATA+TGG	0.213992	8.2:-65670300	MS.gene58316:CDS
TGTTATGATTTGTGGGTATT+TGG	0.285185	8.2:-65670355	MS.gene58316:CDS
TTGGAGAATTTCTCAGTCTA+TGG	0.288501	8.2:-65670336	MS.gene58316:CDS
TAATTGGACAATTGAAATAT+GGG	0.403350	8.2:-65670299	MS.gene58316:CDS
ATCTTCGGTGTTATGATTTG+TGG	0.417327	8.2:-65670363	MS.gene58316:CDS
AGATCATGGTCAAAATCATC+TGG	0.426340	8.2:+65670382	None:intergenic
GAGTCTCTGCTTTCACTGCC+TGG	0.432512	8.2:-65670073	MS.gene58316:CDS
TGGTCAAAATCATCTGGAAA+TGG	0.450872	8.2:+65670388	None:intergenic
AATTGAAATATGGGTGATGA+AGG	0.467515	8.2:-65670290	MS.gene58316:CDS
TTGGTGAAGTATAATGATAA+AGG	0.492510	8.2:-65670154	MS.gene58316:CDS
TCTTCGGTGTTATGATTTGT+GGG	0.498485	8.2:-65670362	MS.gene58316:CDS
TAATGATAAAGGACAGGAGA+TGG	0.501156	8.2:-65670143	MS.gene58316:CDS
ACTGCCTGGTGACCGTCAGC+AGG	0.501497	8.2:-65670059	MS.gene58316:CDS
AATACAAACAACATTCGTCT+TGG	0.503398	8.2:-65670267	MS.gene58316:CDS
GAAGTATAATGATAAAGGAC+AGG	0.531427	8.2:-65670149	MS.gene58316:CDS
AATCATAACACCGAAGATCA+TGG	0.550232	8.2:+65670368	None:intergenic
GTTGGAAATGACGGTGGTCG+TGG	0.551166	8.2:-65670178	MS.gene58316:CDS
ATAGGGGAAAAGTGAAGGCT+AGG	0.553655	8.2:+65670226	None:intergenic
AGTATATAGGGGAAAAGTGA+AGG	0.557979	8.2:+65670221	None:intergenic
AAATGACGGTGGTCGTGGAT+TGG	0.563207	8.2:-65670173	MS.gene58316:CDS
TAAACCTGCTGACGGTCACC+AGG	0.573679	8.2:+65670055	None:intergenic
GAATCTGAATGCATCTGAAG+TGG	0.574519	8.2:-65670107	MS.gene58316:CDS
GGTGATATTGTTGGAAATGA+CGG	0.595106	8.2:-65670187	MS.gene58316:CDS
CATCTTGTTAAACCTGCTGA+CGG	0.678381	8.2:+65670047	None:intergenic
GATATTGTTGGAAATGACGG+TGG	0.748349	8.2:-65670184	MS.gene58316:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAATTGGACAATTGAAATA+TGG	-	chr8.2:65670160-65670179	MS.gene58316:CDS	20.0%
!!	TAATTGGACAATTGAAATAT+GGG	-	chr8.2:65670161-65670180	MS.gene58316:CDS	20.0%
!!!	GGAATAGAAATTTTCATAAT+TGG	-	chr8.2:65670145-65670164	MS.gene58316:CDS	20.0%
!	TTGGTGAAGTATAATGATAA+AGG	-	chr8.2:65670306-65670325	MS.gene58316:CDS	25.0%
!!	ACTTTTTGTAGAGTATATAG+GGG	+	chr8.2:65670253-65670272	None:intergenic	25.0%
!!!	CACTTTTTGTAGAGTATATA+GGG	+	chr8.2:65670254-65670273	None:intergenic	25.0%
	AATACAAACAACATTCGTCT+TGG	-	chr8.2:65670193-65670212	MS.gene58316:CDS	30.0%
	AATTGAAATATGGGTGATGA+AGG	-	chr8.2:65670170-65670189	MS.gene58316:CDS	30.0%
	ACAAAAAGTGGTGATATTGT+TGG	-	chr8.2:65670264-65670283	MS.gene58316:CDS	30.0%
	CCTATATACTCTACAAAAAG+TGG	-	chr8.2:65670252-65670271	MS.gene58316:CDS	30.0%
	GAAGTATAATGATAAAGGAC+AGG	-	chr8.2:65670311-65670330	MS.gene58316:CDS	30.0%
!	TGTTATGATTTGTGGGTATT+TGG	-	chr8.2:65670105-65670124	MS.gene58316:CDS	30.0%
!!	ATGATTTTGACCATGATCTT+CGG	-	chr8.2:65670082-65670101	MS.gene58316:CDS	30.0%
!!!	CCACTTTTTGTAGAGTATAT+AGG	+	chr8.2:65670255-65670274	None:intergenic	30.0%
	AATCATAACACCGAAGATCA+TGG	+	chr8.2:65670095-65670114	None:intergenic	35.0%
	AGATCATGGTCAAAATCATC+TGG	+	chr8.2:65670081-65670100	None:intergenic	35.0%
	AGTATATAGGGGAAAAGTGA+AGG	+	chr8.2:65670242-65670261	None:intergenic	35.0%
	GGTGATATTGTTGGAAATGA+CGG	-	chr8.2:65670273-65670292	MS.gene58316:CDS	35.0%
	TAATGATAAAGGACAGGAGA+TGG	-	chr8.2:65670317-65670336	MS.gene58316:CDS	35.0%
	TGGTCAAAATCATCTGGAAA+TGG	+	chr8.2:65670075-65670094	None:intergenic	35.0%
	TTGGAGAATTTCTCAGTCTA+TGG	-	chr8.2:65670124-65670143	MS.gene58316:CDS	35.0%
!!	ATCTTCGGTGTTATGATTTG+TGG	-	chr8.2:65670097-65670116	MS.gene58316:CDS	35.0%
!!	TCTTCGGTGTTATGATTTGT+GGG	-	chr8.2:65670098-65670117	MS.gene58316:CDS	35.0%
	GAATCTGAATGCATCTGAAG+TGG	-	chr8.2:65670353-65670372	MS.gene58316:CDS	40.0%
	GATATTGTTGGAAATGACGG+TGG	-	chr8.2:65670276-65670295	MS.gene58316:CDS	40.0%
	ATAGGGGAAAAGTGAAGGCT+AGG	+	chr8.2:65670237-65670256	None:intergenic	45.0%
	AAATGACGGTGGTCGTGGAT+TGG	-	chr8.2:65670287-65670306	MS.gene58316:CDS	50.0%
	GAGTCTCTGCTTTCACTGCC+TGG	-	chr8.2:65670387-65670406	MS.gene58316:CDS	55.0%
	GTTGGAAATGACGGTGGTCG+TGG	-	chr8.2:65670282-65670301	MS.gene58316:CDS	55.0%
	TAAACCTGCTGACGGTCACC+AGG	+	chr8.2:65670408-65670427	None:intergenic	55.0%
	ACTGCCTGGTGACCGTCAGC+AGG	-	chr8.2:65670401-65670420	MS.gene58316:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.2	gene	65670054	65670428	65670054	ID=MS.gene58316
chr8.2	mRNA	65670054	65670428	65670054	ID=MS.gene58316.t1;Parent=MS.gene58316
chr8.2	exon	65670054	65670428	65670054	ID=MS.gene58316.t1.exon1;Parent=MS.gene58316.t1
chr8.2	CDS	65670054	65670428	65670054	ID=cds.MS.gene58316.t1;Parent=MS.gene58316.t1

Gene Sequence	>MS.gene58316 ATGAAACTGTTACAGATACCATTTCCAGATGATTTTGACCATGATCTTCGGTGTTATGATTTGTGGGTATTTGGAGAATTTCTCAGTCTATGGAATAGAAATTTTCATAATTGGACAATTGAAATATGGGTGATGAAGGAATACAAACAACATTCGTCTTGGACTAAGTCTCTTGTAATTCCTAGCCTTCACTTTTCCCCTATATACTCTACAAAAAGTGGTGATATTGTTGGAAATGACGGTGGTCGTGGATTGGTGAAGTATAATGATAAAGGACAGGAGATGGAGTATCTTGAAATGAATCTGAATGCATCTGAAGTGGCTATGTATACAGAGTCTCTGCTTTCACTGCCTGGTGACCGTCAGCAGGTTTAA
Protein sequence	>MS.gene58316.t1 MKLLQIPFPDDFDHDLRCYDLWVFGEFLSLWNRNFHNWTIEIWVMKEYKQHSSWTKSLVIPSLHFSPIYSTKSGDIVGNDGGRGLVKYNDKGQEMEYLEMNLNASEVAMYTESLLSLPGDRQQV