AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92376


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92376.t1 MTR_3g103020 59.511 368 132 10 10 369 20 378 6.15e-141 405
MS.gene92376.t1 MTR_4g109270 60.163 369 126 10 10 369 8 364 4.39e-137 395
MS.gene92376.t1 MTR_3g034180 54.948 384 147 12 1 368 115 488 2.15e-126 372
MS.gene92376.t1 MTR_3g034160 56.104 385 141 14 1 368 1 374 3.10e-124 363
MS.gene92376.t1 MTR_4g117850 55.372 363 147 10 10 366 23 376 3.50e-122 357
MS.gene92376.t1 MTR_3g034130 53.639 371 147 11 1 355 1 362 1.43e-120 353
MS.gene92376.t1 MTR_4g116330 53.369 371 149 10 10 369 23 380 6.25e-120 352
MS.gene92376.t1 MTR_6g060650 55.200 375 142 10 10 368 8 372 1.05e-119 351
MS.gene92376.t1 MTR_4g109280 56.676 367 137 11 10 369 8 359 1.34e-118 348
MS.gene92376.t1 MTR_4g117780 53.659 369 150 10 10 369 11 367 4.54e-118 347
MS.gene92376.t1 MTR_4g117770 54.918 366 144 10 13 369 14 367 7.29e-117 343
MS.gene92376.t1 MTR_4g117810 54.918 366 144 10 13 369 14 367 7.29e-117 343
MS.gene92376.t1 MTR_4g094365 53.639 371 147 12 10 369 8 364 2.36e-116 342
MS.gene92376.t1 MTR_4g021785 52.589 367 159 9 4 369 3 355 8.92e-115 338
MS.gene92376.t1 MTR_5g070080 51.269 394 159 11 1 369 1 386 2.78e-114 338
MS.gene92376.t1 MTR_4g023080 51.613 372 157 11 1 368 1 353 3.31e-113 334
MS.gene92376.t1 MTR_4g023090 51.053 380 153 12 10 368 16 383 2.99e-111 330
MS.gene92376.t1 MTR_5g070088 50.904 387 156 11 10 369 7 386 1.98e-109 325
MS.gene92376.t1 MTR_4g117870 57.718 298 82 6 77 369 9 267 5.01e-109 320
MS.gene92376.t1 MTR_4g117720 50.667 375 123 11 10 369 51 378 1.13e-107 320
MS.gene92376.t1 MTR_4g122850 51.374 364 151 15 21 369 12 364 1.25e-107 320
MS.gene92376.t1 MTR_5g070130 50.670 373 165 11 10 369 11 377 1.98e-106 318
MS.gene92376.t1 MTR_4g023130 49.322 369 129 9 1 368 1 312 9.86e-106 313
MS.gene92376.t1 MTR_5g097210 51.639 366 152 13 10 365 9 359 1.18e-104 313
MS.gene92376.t1 MTR_4g023070 49.077 379 161 11 10 368 3 369 6.91e-104 311
MS.gene92376.t1 MTR_8g433040 50.270 370 151 11 10 369 18 364 2.79e-103 309
MS.gene92376.t1 MTR_8g032380 50.270 370 151 11 10 369 18 364 2.79e-103 309
MS.gene92376.t1 MTR_4g023120 48.421 380 164 12 10 369 3 370 3.41e-101 304
MS.gene92376.t1 MTR_8g032390 48.476 361 150 9 10 364 40 370 5.09e-101 303
MS.gene92376.t1 MTR_1g055135 50.134 373 163 14 10 369 13 375 3.82e-100 301
MS.gene92376.t1 MTR_4g116330 48.518 371 128 10 10 369 23 341 4.70e-99 297
MS.gene92376.t1 MTR_4g118380 52.514 358 133 11 10 340 8 355 6.52e-99 298
MS.gene92376.t1 MTR_4g023190 51.200 375 157 13 1 367 1 357 3.89e-96 290
MS.gene92376.t1 MTR_4g023380 49.361 391 140 14 10 369 16 379 1.00e-95 290
MS.gene92376.t1 MTR_4g023200 50.847 354 145 14 24 367 24 358 3.91e-95 288
MS.gene92376.t1 MTR_4g023440 48.649 370 137 10 4 369 12 332 2.56e-94 285
MS.gene92376.t1 MTR_4g023150 50.532 376 159 14 1 367 1 358 1.37e-93 284
MS.gene92376.t1 MTR_4g117750 51.604 374 142 18 10 365 3 355 7.14e-91 281
MS.gene92376.t1 MTR_4g117750 56.061 132 50 1 244 367 350 481 2.35e-36 138
MS.gene92376.t1 MTR_8g433030 45.658 357 133 9 10 364 40 337 2.85e-86 265
MS.gene92376.t1 MTR_8g013010 54.545 275 102 11 10 274 54 315 7.84e-84 258
MS.gene92376.t1 MTR_4g121580 45.924 368 154 11 4 359 5 339 1.78e-83 259
MS.gene92376.t1 MTR_1g055165 44.000 375 147 14 1 369 1 318 1.18e-82 254
MS.gene92376.t1 MTR_1g055195 48.505 301 128 13 81 369 193 478 1.73e-78 249
MS.gene92376.t1 MTR_8g040935 55.024 209 89 4 165 369 1 208 2.26e-70 219
MS.gene92376.t1 MTR_7g079370 42.319 345 169 13 39 363 16 350 6.75e-67 215
MS.gene92376.t1 MTR_4g118400 47.692 260 107 7 104 363 64 294 2.09e-66 212
MS.gene92376.t1 MTR_4g118370 49.004 251 95 10 123 366 33 257 1.25e-64 206
MS.gene92376.t1 MTR_7g079400 42.715 302 152 11 82 369 43 337 2.37e-64 208
MS.gene92376.t1 MTR_4g116320 53.425 219 90 6 154 366 43 255 1.47e-63 203
MS.gene92376.t1 MTR_6g463430 53.110 209 87 6 165 369 1 202 1.76e-63 201
MS.gene92376.t1 MTR_2g048580 40.000 370 177 17 10 369 8 342 1.29e-62 204
MS.gene92376.t1 MTR_8g102520 37.228 368 170 13 10 369 8 322 4.91e-62 202
MS.gene92376.t1 MTR_5g023000 92.929 99 7 0 271 369 1 99 1.12e-61 193
MS.gene92376.t1 MTR_4g117530 44.758 248 90 6 128 369 47 253 1.31e-54 180
MS.gene92376.t1 MTR_1g055175 49.510 204 93 8 171 369 3 201 2.75e-52 172
MS.gene92376.t1 MTR_4g116340 44.915 236 95 7 10 234 36 247 6.09e-52 173
MS.gene92376.t1 MTR_1g055250 45.022 231 110 10 134 356 32 253 3.67e-51 174
MS.gene92376.t1 MTR_4g117430 56.291 151 56 5 122 271 14 155 3.47e-48 160
MS.gene92376.t1 MTR_4g114700 38.996 259 100 6 111 360 9 218 3.97e-41 145
MS.gene92376.t1 MTR_7g079420 37.091 275 123 10 110 369 905 1144 4.28e-39 149
MS.gene92376.t1 MTR_4g118360 63.793 116 36 4 256 369 15 126 1.14e-38 134
MS.gene92376.t1 MTR_7g117720 43.333 210 82 7 1 198 1 185 5.68e-38 137
MS.gene92376.t1 MTR_7g117720 63.218 87 28 2 282 364 186 272 4.35e-24 100
MS.gene92376.t1 MTR_4g122860 38.767 227 98 6 148 369 130 320 6.62e-37 136
MS.gene92376.t1 MTR_8g098830 46.154 169 79 8 177 340 35 196 6.20e-34 125
MS.gene92376.t1 MTR_4g133170 28.954 373 227 14 7 360 1 354 1.45e-33 129
MS.gene92376.t1 MTR_5g069120 42.541 181 85 5 20 185 1 177 1.79e-32 120
MS.gene92376.t1 MTR_2g021150 28.052 385 236 16 1 361 1 368 6.40e-32 124
MS.gene92376.t1 MTR_4g109290 43.902 164 59 5 4 165 3 135 7.21e-32 119
MS.gene92376.t1 MTR_4g109290 58.491 53 22 0 317 369 136 188 1.05e-11 63.5
MS.gene92376.t1 MTR_8g101580 26.933 375 242 13 2 361 37 394 1.02e-31 124
MS.gene92376.t1 MTR_1g050542 27.473 364 237 11 9 361 57 404 6.36e-30 119
MS.gene92376.t1 MTR_4g108820 31.208 298 157 12 10 304 42 294 1.17e-29 116
MS.gene92376.t1 MTR_7g079450 46.853 143 69 4 228 369 1 137 3.80e-29 110
MS.gene92376.t1 MTR_3g007330 29.967 307 172 10 10 299 48 328 3.82e-28 114
MS.gene92376.t1 MTR_1g094210 28.338 367 225 17 9 361 56 398 7.66e-28 113
MS.gene92376.t1 MTR_1g094210 28.779 344 208 16 9 338 56 376 1.00e-27 113
MS.gene92376.t1 MTR_4g107820 28.526 312 196 13 10 312 36 329 1.13e-27 112
MS.gene92376.t1 MTR_4g107780 28.526 312 196 13 10 312 36 329 1.13e-27 112
MS.gene92376.t1 MTR_4g107780 28.526 312 196 13 10 312 36 329 1.36e-27 112
MS.gene92376.t1 MTR_4g107820 28.526 312 196 13 10 312 36 329 1.53e-27 112
MS.gene92376.t1 MTR_2g028130 28.150 373 196 13 10 334 5 353 2.41e-27 112
MS.gene92376.t1 MTR_2g426020 27.901 405 217 19 10 366 6 383 2.94e-27 111
MS.gene92376.t1 MTR_1g097490 28.571 364 226 15 10 361 49 390 5.37e-27 110
MS.gene92376.t1 MTR_3g009310 29.940 334 207 12 10 334 42 357 5.40e-27 110
MS.gene92376.t1 MTR_3g007360 30.449 312 165 12 13 299 55 339 6.09e-27 110
MS.gene92376.t1 MTR_2g046830 30.000 310 193 10 5 303 17 313 7.83e-27 110
MS.gene92376.t1 MTR_2g046920 30.667 300 191 11 10 303 24 312 1.03e-26 109
MS.gene92376.t1 MTR_3g007410 30.449 312 165 12 13 299 55 339 1.24e-26 110
MS.gene92376.t1 MTR_5g022420 29.766 299 171 11 10 296 27 298 1.32e-26 109
MS.gene92376.t1 MTR_2g028160 28.150 373 218 16 10 340 5 369 2.18e-26 109
MS.gene92376.t1 MTR_2g055970 28.406 345 213 13 10 337 211 538 2.22e-26 110
MS.gene92376.t1 MTR_4g055060 30.721 319 174 12 6 299 26 322 2.96e-26 108
MS.gene92376.t1 MTR_2g028140 29.341 334 166 15 10 294 5 317 7.20e-26 107
MS.gene92376.t1 MTR_5g057790 30.363 303 179 11 10 298 46 330 8.25e-26 107
MS.gene92376.t1 MTR_1g068875 28.329 353 212 18 7 338 1 333 2.44e-25 105
MS.gene92376.t1 MTR_8g467140 28.254 315 193 12 7 306 29 325 2.53e-25 105
MS.gene92376.t1 MTR_1g097560 29.683 347 195 17 10 337 36 352 2.86e-25 105
MS.gene92376.t1 MTR_3g007430 31.068 309 158 13 12 294 45 324 4.05e-25 105
MS.gene92376.t1 MTR_0667s0010 27.221 349 198 13 10 323 6 333 4.73e-25 105
MS.gene92376.t1 MTR_2g024110 27.877 391 230 17 7 366 1 370 6.88e-25 104
MS.gene92376.t1 MTR_3g036290 29.667 300 176 14 9 299 21 294 9.87e-25 103
MS.gene92376.t1 MTR_3g009240 29.153 295 181 12 10 294 36 312 1.05e-24 104
MS.gene92376.t1 MTR_5g011200 28.302 318 184 13 10 306 17 311 1.41e-24 103
MS.gene92376.t1 MTR_4g061340 28.438 320 170 12 10 299 26 316 2.16e-24 103
MS.gene92376.t1 MTR_5g057710 29.530 298 188 11 10 298 46 330 3.75e-24 102
MS.gene92376.t1 MTR_2g046900 28.247 308 196 11 10 303 28 324 4.25e-24 102
MS.gene92376.t1 MTR_2g025420 27.807 374 202 14 6 330 2 356 7.43e-24 102
MS.gene92376.t1 MTR_3g013740 29.102 323 171 13 10 298 44 342 7.61e-24 102
MS.gene92376.t1 MTR_3g007270 28.750 320 188 16 4 299 41 344 1.17e-23 101
MS.gene92376.t1 MTR_3g072470 29.360 344 180 16 3 304 15 337 1.21e-23 101
MS.gene92376.t1 MTR_3g006670 29.712 313 181 13 2 294 39 332 1.58e-23 101
MS.gene92376.t1 MTR_3g030250 27.321 377 215 14 10 361 37 379 1.65e-23 100
MS.gene92376.t1 MTR_3g083010 27.470 415 227 16 10 369 6 401 3.65e-23 100
MS.gene92376.t1 MTR_4g031770 27.036 307 191 11 7 298 1 289 3.79e-23 99.8
MS.gene92376.t1 MTR_1g054575 29.310 290 186 9 9 293 51 326 4.02e-23 101
MS.gene92376.t1 MTR_1g068860 29.073 313 183 13 7 299 1 294 4.12e-23 99.8
MS.gene92376.t1 MTR_2g047832 30.094 319 188 12 10 303 29 337 5.01e-23 99.8
MS.gene92376.t1 MTR_2g031720 27.970 404 215 17 8 369 4 373 7.51e-23 99.0
MS.gene92376.t1 MTR_8g099460 28.490 351 191 17 10 329 5 326 1.10e-22 98.6
MS.gene92376.t1 MTR_3g010390 28.115 313 193 12 10 299 33 336 1.27e-22 98.6
MS.gene92376.t1 MTR_3g014540 28.296 311 177 13 10 298 29 315 2.11e-22 97.8
MS.gene92376.t1 MTR_3g023930 29.568 301 170 13 3 294 27 294 2.33e-22 97.4
MS.gene92376.t1 MTR_2g021190 30.293 307 169 17 10 294 21 304 2.44e-22 97.4
MS.gene92376.t1 MTR_3g013770 26.115 314 192 10 6 298 29 323 2.77e-22 97.4
MS.gene92376.t1 MTR_1g068835 28.254 315 181 14 7 299 1 292 3.07e-22 97.1
MS.gene92376.t1 MTR_5g007610 28.981 314 182 13 10 299 41 337 5.42e-22 96.7
MS.gene92376.t1 MTR_3g006500 26.790 377 227 15 10 361 17 369 5.60e-22 96.3
MS.gene92376.t1 MTR_1g115160 27.869 305 192 13 1 296 10 295 6.06e-22 96.3
MS.gene92376.t1 MTR_8g073550 35.294 204 104 9 4 191 24 215 6.89e-22 93.6
MS.gene92376.t1 MTR_1g097330 29.260 311 187 14 4 301 10 300 8.02e-22 96.3
MS.gene92376.t1 MTR_3g006570 27.226 393 208 19 10 361 21 376 8.17e-22 95.9
MS.gene92376.t1 MTR_2g046800 26.500 400 227 15 9 361 13 392 1.36e-21 95.5
MS.gene92376.t1 MTR_1g056710 26.786 392 212 17 10 362 34 389 1.93e-21 95.1
MS.gene92376.t1 MTR_3g009260 29.252 294 179 13 10 294 41 314 2.63e-21 94.7
MS.gene92376.t1 MTR_3g014570 28.896 308 181 14 10 299 29 316 2.81e-21 94.4
MS.gene92376.t1 MTR_3g010970 26.042 384 208 17 12 361 50 391 3.34e-21 94.4
MS.gene92376.t1 MTR_2g021210 26.567 335 215 12 10 334 84 397 4.00e-21 94.4
MS.gene92376.t1 MTR_7g070880 24.941 425 233 19 3 362 18 421 4.22e-21 94.4
MS.gene92376.t1 MTR_7g070830 26.247 381 207 17 1 320 8 375 5.51e-21 94.0
MS.gene92376.t1 MTR_2g021155 28.758 306 181 13 10 298 36 321 5.99e-21 95.1
MS.gene92376.t1 MTR_2g021155 28.922 204 122 9 104 294 689 882 2.16e-12 68.9
MS.gene92376.t1 MTR_2g078900 28.571 315 171 14 4 294 25 309 8.58e-21 92.8
MS.gene92376.t1 MTR_2g026010 27.979 386 209 17 7 364 1 345 9.44e-21 93.2
MS.gene92376.t1 MTR_4g013180 27.441 379 225 16 1 339 1 369 1.16e-20 93.6
MS.gene92376.t1 MTR_7g407070 28.955 335 171 17 10 302 32 341 1.22e-20 92.8
MS.gene92376.t1 MTR_2g426070 28.180 401 224 16 11 368 7 386 1.98e-20 92.0
MS.gene92376.t1 MTR_7g056820 25.543 368 228 13 5 340 2 355 2.27e-20 91.7
MS.gene92376.t1 MTR_4g070550 27.829 327 174 15 10 294 5 311 2.70e-20 91.7
MS.gene92376.t1 MTR_4g122840 40.441 136 45 3 235 369 164 264 3.00e-20 89.7
MS.gene92376.t1 MTR_2g031680 27.036 307 188 11 9 298 5 292 3.24e-20 91.3
MS.gene92376.t1 MTR_5g069760 26.382 398 215 16 10 362 6 370 3.37e-20 91.3
MS.gene92376.t1 MTR_2g029990 26.344 372 232 15 11 361 52 402 4.59e-20 91.3
MS.gene92376.t1 MTR_3g011060 27.187 320 179 15 10 298 28 324 5.03e-20 90.9
MS.gene92376.t1 MTR_3g083640 26.954 371 229 17 10 361 55 402 5.09e-20 90.9
MS.gene92376.t1 MTR_6g034720 38.587 184 86 10 105 276 31 199 6.37e-20 87.4
MS.gene92376.t1 MTR_0044s0300 26.289 388 226 17 4 361 32 389 7.00e-20 90.5
MS.gene92376.t1 MTR_3g010520 28.571 301 160 17 10 294 25 286 7.82e-20 90.1
MS.gene92376.t1 MTR_1g055070 28.214 280 165 11 9 261 48 318 9.04e-20 90.1
MS.gene92376.t1 MTR_0707s0020 24.605 443 238 16 2 363 18 445 1.01e-19 90.5
MS.gene92376.t1 MTR_8g046310 24.533 375 245 10 13 365 19 377 1.40e-19 89.4
MS.gene92376.t1 MTR_0129s0050 24.500 400 244 10 13 364 17 406 1.46e-19 89.7
MS.gene92376.t1 MTR_5g057690 28.620 297 182 13 10 298 46 320 2.65e-19 89.0
MS.gene92376.t1 MTR_3g036335 27.851 377 224 16 10 361 41 394 4.23e-19 88.2
MS.gene92376.t1 MTR_7g056290 27.660 329 189 14 13 304 25 341 4.57e-19 88.6
MS.gene92376.t1 MTR_3g010430 27.640 322 157 16 10 294 36 318 5.40e-19 88.2
MS.gene92376.t1 MTR_1g054725 26.316 380 228 16 10 361 20 375 7.42e-19 87.4
MS.gene92376.t1 MTR_2g031640 27.013 385 235 17 9 368 5 368 7.47e-19 87.4
MS.gene92376.t1 MTR_1g114700 27.184 309 193 11 10 302 29 321 9.12e-19 87.4
MS.gene92376.t1 MTR_3g010590 27.393 303 181 12 3 294 32 306 1.24e-18 86.7
MS.gene92376.t1 MTR_7g055987 26.879 346 197 17 3 318 16 335 1.25e-18 86.7
MS.gene92376.t1 MTR_2g025960 28.279 244 141 9 108 323 5 242 1.39e-18 85.9
MS.gene92376.t1 MTR_7g056390 26.744 344 190 14 3 304 14 337 1.46e-18 87.0
MS.gene92376.t1 MTR_7g060940 26.857 350 178 14 5 311 17 331 1.99e-18 86.3
MS.gene92376.t1 MTR_3g030350 28.247 308 184 13 10 302 35 320 2.11e-18 86.3
MS.gene92376.t1 MTR_3g030240 24.599 374 238 13 3 361 33 377 2.42e-18 85.9
MS.gene92376.t1 MTR_3g024110 28.618 304 167 14 10 294 101 373 2.68e-18 86.3
MS.gene92376.t1 MTR_0115s0020 25.155 322 211 12 1 294 1 320 2.74e-18 85.9
MS.gene92376.t1 MTR_3g436150 28.125 352 198 15 10 331 32 358 2.99e-18 85.9
MS.gene92376.t1 MTR_2g104340 25.310 403 231 15 10 364 14 394 4.65e-18 85.1
MS.gene92376.t1 MTR_1g115185 25.212 353 219 15 3 336 32 358 4.84e-18 85.1
MS.gene92376.t1 MTR_2g024100 27.673 318 171 14 14 294 11 306 5.35e-18 85.1
MS.gene92376.t1 MTR_0464s0020 25.797 345 200 16 4 304 17 349 6.75e-18 85.1
MS.gene92376.t1 MTR_6g016285 25.532 423 234 18 2 361 13 417 7.00e-18 85.1
MS.gene92376.t1 MTR_0649s0020 26.835 395 230 15 9 361 10 387 8.63e-18 84.3
MS.gene92376.t1 MTR_8g013005 61.017 59 23 0 311 369 1 59 1.05e-17 76.6
MS.gene92376.t1 MTR_7g056003 27.596 366 181 16 13 320 18 357 1.41e-17 84.0
MS.gene92376.t1 MTR_5g057020 28.070 285 184 8 10 293 46 310 1.44e-17 83.2
MS.gene92376.t1 MTR_3g010620 26.710 307 176 14 3 294 29 301 1.76e-17 83.6
MS.gene92376.t1 MTR_3g023940 25.858 379 225 14 10 361 34 383 2.09e-17 83.2
MS.gene92376.t1 MTR_7g079640 27.042 355 216 15 10 339 13 349 2.25e-17 83.2
MS.gene92376.t1 MTR_6g090180 25.124 402 238 15 10 362 47 434 2.48e-17 83.2
MS.gene92376.t1 MTR_3g007300 26.790 377 192 16 10 361 49 366 2.68e-17 82.8
MS.gene92376.t1 MTR_7g056760 23.834 386 256 12 10 361 23 404 3.53e-17 82.8
MS.gene92376.t1 MTR_6g013270 25.962 312 200 11 1 296 20 316 3.74e-17 82.4
MS.gene92376.t1 MTR_6g021880 26.299 308 201 11 21 311 31 329 4.59e-17 82.0
MS.gene92376.t1 MTR_4g024890 23.500 400 251 15 1 361 1 384 4.76e-17 82.0
MS.gene92376.t1 MTR_6g086825 25.436 401 247 13 10 367 70 461 5.12e-17 82.4
MS.gene92376.t1 MTR_3g011100 26.410 390 226 18 10 361 235 601 5.53e-17 82.8
MS.gene92376.t1 MTR_6g065980 30.068 296 167 14 10 294 16 282 5.73e-17 81.6
MS.gene92376.t1 MTR_5g069930 26.396 394 202 18 10 345 6 369 6.49e-17 81.6
MS.gene92376.t1 MTR_3g030330 27.157 313 172 12 4 294 14 292 7.73e-17 81.3
MS.gene92376.t1 MTR_4g023430 50.000 82 38 1 291 369 141 222 8.28e-17 79.0
MS.gene92376.t1 MTR_4g023430 55.172 87 35 3 1 87 32 114 2.18e-14 72.0
MS.gene92376.t1 MTR_7g007300 27.742 310 169 13 10 298 103 378 8.59e-17 81.6
MS.gene92376.t1 MTR_5g048160 25.000 400 244 17 7 362 1 388 9.50e-17 81.3
MS.gene92376.t1 MTR_4g030830 24.352 386 214 16 9 339 8 370 9.86e-17 81.3
MS.gene92376.t1 MTR_0760s0010 28.065 367 215 19 15 361 52 389 1.00e-16 81.3
MS.gene92376.t1 MTR_7g070440 27.864 323 181 15 13 304 10 311 1.32e-16 80.9
MS.gene92376.t1 MTR_7g078040 27.933 358 189 16 1 304 1 343 1.45e-16 80.9
MS.gene92376.t1 MTR_4g037465 25.000 388 227 17 2 346 13 379 1.62e-16 80.5
MS.gene92376.t1 MTR_3g010920 26.421 299 170 13 10 294 44 306 2.01e-16 80.1
MS.gene92376.t1 MTR_2g043400 27.536 345 180 14 4 303 17 336 2.33e-16 80.5
MS.gene92376.t1 MTR_4g033495 27.027 407 225 22 9 366 26 409 3.10e-16 80.1
MS.gene92376.t1 MTR_6g053240 24.918 305 193 11 10 294 28 316 3.25e-16 79.7
MS.gene92376.t1 MTR_1g055375 26.064 376 237 16 12 361 6 366 3.28e-16 79.3
MS.gene92376.t1 MTR_6g086920 23.581 458 238 17 2 363 30 471 3.50e-16 80.1
MS.gene92376.t1 MTR_8g464770 23.316 386 244 15 10 363 12 377 3.51e-16 79.3
MS.gene92376.t1 MTR_3g024150 28.758 306 165 15 12 294 37 312 3.64e-16 79.7
MS.gene92376.t1 MTR_5g057643 29.707 239 139 10 10 234 46 269 3.75e-16 78.2
MS.gene92376.t1 MTR_7g066100 26.163 344 199 15 3 306 5 333 4.66e-16 79.3
MS.gene92376.t1 MTR_4g129160 27.123 365 196 19 9 317 6 356 4.96e-16 79.0
MS.gene92376.t1 MTR_7g013590 26.518 313 190 10 2 294 28 320 5.36e-16 79.3
MS.gene92376.t1 MTR_7g057270 26.284 331 200 13 9 305 25 345 5.80e-16 79.3
MS.gene92376.t1 MTR_6g053260 28.025 314 167 17 10 294 337 620 9.95e-16 79.0
MS.gene92376.t1 MTR_0054s0090 25.758 396 235 16 18 367 25 407 1.11e-15 78.2
MS.gene92376.t1 MTR_3g096250 33.140 172 109 5 1 167 38 208 1.18e-15 77.8
MS.gene92376.t1 MTR_7g055870 25.789 380 196 15 13 320 16 381 1.41e-15 78.2
MS.gene92376.t1 MTR_7g017130 26.205 332 185 14 10 298 18 332 1.47e-15 77.8
MS.gene92376.t1 MTR_0128s0070 24.121 398 231 14 10 360 22 395 1.58e-15 77.8
MS.gene92376.t1 MTR_7g017170 26.205 332 185 14 10 298 18 332 1.72e-15 77.8
MS.gene92376.t1 MTR_5g057040 31.343 201 117 9 10 195 46 240 2.01e-15 78.6
MS.gene92376.t1 MTR_2g461450 25.000 364 226 13 2 339 9 351 2.26e-15 77.0
MS.gene92376.t1 MTR_4g014370 22.195 410 251 16 10 364 11 407 2.27e-15 77.4
MS.gene92376.t1 MTR_7g061060 26.061 330 195 10 1 299 4 315 2.37e-15 77.0
MS.gene92376.t1 MTR_8g062660 25.381 394 219 19 9 361 21 380 2.41e-15 77.8
MS.gene92376.t1 MTR_7g062060 25.212 353 202 13 3 308 5 342 2.54e-15 77.0
MS.gene92376.t1 MTR_7g067680 27.434 339 192 17 10 334 49 347 3.24e-15 76.6
MS.gene92376.t1 MTR_7g056503 24.211 380 257 14 10 361 21 397 3.41e-15 76.6
MS.gene92376.t1 MTR_6g079810 25.728 412 248 17 2 366 63 463 3.88e-15 77.0
MS.gene92376.t1 MTR_7g066000 27.640 322 196 12 10 303 25 337 4.57e-15 76.3
MS.gene92376.t1 MTR_1g055200 48.780 82 38 3 107 185 5 85 4.76e-15 70.9
MS.gene92376.t1 MTR_7g028660 25.762 361 205 14 3 324 4 340 4.78e-15 76.3
MS.gene92376.t1 MTR_7g091630 24.074 324 213 12 10 305 32 350 1.04e-14 75.5
MS.gene92376.t1 MTR_0128s0020 26.220 328 181 13 9 299 17 320 1.06e-14 75.1
MS.gene92376.t1 MTR_7g445890 22.589 394 238 11 9 361 15 382 1.16e-14 75.1
MS.gene92376.t1 MTR_7g069550 25.199 377 220 15 9 339 13 373 1.25e-14 75.1
MS.gene92376.t1 MTR_2g021252 24.607 382 212 17 12 362 49 385 1.47e-14 74.7
MS.gene92376.t1 MTR_7g077970 25.872 344 195 13 7 303 1 331 1.70e-14 74.7
MS.gene92376.t1 MTR_6g007135 25.879 313 206 10 2 298 18 320 2.22e-14 74.3
MS.gene92376.t1 MTR_7g062100 23.858 394 237 14 10 361 24 396 2.57e-14 73.9
MS.gene92376.t1 MTR_3g011020 25.714 315 171 14 10 298 28 305 3.14e-14 73.6
MS.gene92376.t1 MTR_7g055977 27.536 345 188 18 5 310 2 323 3.51e-14 73.6
MS.gene92376.t1 MTR_1g055055 24.752 303 183 11 10 300 26 295 3.75e-14 73.2
MS.gene92376.t1 MTR_6g478230 23.785 391 244 11 13 364 30 405 4.34e-14 73.6
MS.gene92376.t1 MTR_3g013950 24.599 374 224 15 9 339 6 364 4.45e-14 73.2
MS.gene92376.t1 MTR_4g129190 25.208 361 199 14 10 320 6 345 4.57e-14 73.2
MS.gene92376.t1 MTR_1g112930 24.834 302 198 13 3 293 16 299 4.92e-14 73.2
MS.gene92376.t1 MTR_6g017280 23.932 351 222 11 5 320 4 344 5.64e-14 73.2
MS.gene92376.t1 MTR_5g068040 26.562 320 168 14 13 299 19 304 6.68e-14 72.8
MS.gene92376.t1 MTR_0129s0070 23.020 404 238 14 13 368 20 398 8.49e-14 72.4
MS.gene92376.t1 MTR_4g028510 23.810 399 244 13 13 366 19 402 8.54e-14 72.8
MS.gene92376.t1 MTR_7g056260 26.923 338 180 14 2 299 6 316 8.60e-14 72.0
MS.gene92376.t1 MTR_2g047892 23.762 404 239 20 4 361 16 396 1.02e-13 72.4
MS.gene92376.t1 MTR_5g072060 28.650 363 203 17 10 339 6 345 1.20e-13 72.8
MS.gene92376.t1 MTR_2g031700 27.165 254 139 9 9 243 5 231 1.21e-13 71.2
MS.gene92376.t1 MTR_3g009250 30.769 221 129 10 10 222 41 245 1.22e-13 70.5
MS.gene92376.t1 MTR_4g028660 24.242 396 241 14 10 362 16 395 1.23e-13 72.0
MS.gene92376.t1 MTR_4g027450 24.242 396 241 14 10 362 16 395 1.23e-13 72.0
MS.gene92376.t1 MTR_7g066030 24.084 382 227 14 2 336 13 378 1.82e-13 71.6
MS.gene92376.t1 MTR_7g056737 26.146 371 195 15 1 324 13 351 1.91e-13 71.6
MS.gene92376.t1 MTR_5g056020 26.426 333 190 14 9 294 16 340 1.92e-13 71.6
MS.gene92376.t1 MTR_5g023570 38.462 117 61 4 4 118 31 138 1.93e-13 67.4
MS.gene92376.t1 MTR_2g078850 26.710 307 172 15 12 294 32 309 2.54e-13 70.9
MS.gene92376.t1 MTR_2g021950 23.404 376 217 14 13 339 19 372 2.58e-13 70.9
MS.gene92376.t1 MTR_8g063440 22.656 384 250 13 10 362 12 379 2.74e-13 70.9
MS.gene92376.t1 MTR_4g055820 23.907 343 189 14 10 298 14 338 3.10e-13 70.5
MS.gene92376.t1 MTR_8g041270 24.752 404 241 16 10 364 15 404 3.71e-13 70.5
MS.gene92376.t1 MTR_5g008530 73.469 49 12 1 10 58 18 65 4.25e-13 64.3
MS.gene92376.t1 MTR_1g088120 24.590 366 221 12 1 320 1 357 7.33e-13 69.7
MS.gene92376.t1 MTR_7g091640 25.610 328 199 16 10 305 35 349 7.89e-13 69.3
MS.gene92376.t1 MTR_3g006530 25.000 400 221 20 4 361 34 396 8.10e-13 69.7
MS.gene92376.t1 MTR_3g024040 23.693 287 196 10 17 299 38 305 8.72e-13 69.3
MS.gene92376.t1 MTR_2g010950 22.785 395 252 12 10 361 20 404 1.01e-12 69.3
MS.gene92376.t1 MTR_5g046300 24.921 317 187 14 7 302 1 287 1.23e-12 68.6
MS.gene92376.t1 MTR_5g046290 24.921 317 187 14 7 302 1 287 1.23e-12 68.6
MS.gene92376.t1 MTR_7g061050 26.393 341 189 15 1 305 4 318 1.28e-12 68.9
MS.gene92376.t1 MTR_2g010920 25.220 341 208 13 10 306 20 357 1.36e-12 68.9
MS.gene92376.t1 MTR_7g056200 25.758 396 213 20 10 361 23 381 1.36e-12 68.9
MS.gene92376.t1 MTR_3g010440 25.490 306 135 11 10 299 26 254 1.37e-12 68.6
MS.gene92376.t1 MTR_2g043410 26.979 341 188 16 3 303 16 335 1.39e-12 68.9
MS.gene92376.t1 MTR_4g011660 24.157 356 207 13 2 307 11 353 1.43e-12 68.9
MS.gene92376.t1 MTR_0054s0100 23.797 395 246 13 18 367 25 409 1.82e-12 68.6
MS.gene92376.t1 MTR_7g079160 23.040 421 235 18 4 353 2 404 1.93e-12 68.6
MS.gene92376.t1 MTR_0097s0030 23.670 376 219 16 13 348 17 364 2.50e-12 68.2
MS.gene92376.t1 MTR_2g047240 23.670 376 219 16 13 348 17 364 2.50e-12 68.2
MS.gene92376.t1 MTR_7g078860 25.686 401 226 21 4 354 3 381 2.58e-12 67.8
MS.gene92376.t1 MTR_6g080680 24.874 398 225 15 10 360 19 389 3.17e-12 67.8
MS.gene92376.t1 MTR_7g017040 23.929 397 240 15 10 362 16 394 4.16e-12 67.4
MS.gene92376.t1 MTR_7g050480 27.160 324 176 17 4 294 16 312 4.89e-12 67.0
MS.gene92376.t1 MTR_2g046860 26.190 210 140 7 102 303 3 205 5.56e-12 66.6
MS.gene92376.t1 MTR_5g037680 24.623 398 224 18 13 361 11 381 5.76e-12 67.0
MS.gene92376.t1 MTR_7g060960 27.358 318 165 14 4 299 26 299 7.79e-12 66.2
MS.gene92376.t1 MTR_4g023100 57.143 56 22 1 313 368 65 118 1.01e-11 62.0
MS.gene92376.t1 MTR_3g030320 25.926 270 166 14 109 361 46 298 1.15e-11 65.5
MS.gene92376.t1 MTR_3g007390 26.115 157 100 3 148 299 1 146 1.20e-11 63.9
MS.gene92376.t1 MTR_3g006300 63.830 47 16 1 5 51 25 70 1.35e-11 60.8
MS.gene92376.t1 MTR_6g048120 25.566 309 188 14 10 294 36 326 1.40e-11 65.9
MS.gene92376.t1 MTR_4g030110 25.479 365 221 19 1 337 21 362 1.45e-11 65.5
MS.gene92376.t1 MTR_7g066080 24.044 366 213 14 4 320 10 359 1.81e-11 65.5
MS.gene92376.t1 MTR_2g104280 22.276 413 240 15 10 364 14 403 1.84e-11 65.5
MS.gene92376.t1 MTR_2g022000 23.214 392 222 16 10 339 16 390 1.95e-11 65.5
MS.gene92376.t1 MTR_3g058480 27.341 267 157 12 2 247 32 282 2.02e-11 64.7
MS.gene92376.t1 MTR_7g050520 26.462 325 165 18 10 294 22 312 3.43e-11 64.7
MS.gene92376.t1 MTR_1g015730 24.841 314 196 11 10 299 9 306 3.92e-11 64.3
MS.gene92376.t1 MTR_5g086590 23.737 198 127 7 116 299 8 195 4.03e-11 62.8
MS.gene92376.t1 MTR_4g080200 26.490 302 175 14 13 294 6 280 4.88e-11 63.9
MS.gene92376.t1 MTR_0129s0120 23.232 396 225 16 18 362 25 392 5.80e-11 63.9
MS.gene92376.t1 MTR_3g009290 26.432 227 141 8 4 222 29 237 8.62e-11 62.4
MS.gene92376.t1 MTR_6g079770 23.487 413 242 14 13 366 20 417 9.66e-11 63.2
MS.gene92376.t1 MTR_4g130330 25.000 376 217 17 10 339 7 363 9.90e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92376.t1 AT3G06240 28.108 370 204 15 9 332 35 388 5.71e-25 105
MS.gene92376.t1 AT3G23880 29.841 315 178 13 10 304 14 305 9.25e-25 103
MS.gene92376.t1 AT4G12560 28.981 314 192 14 7 299 1 304 5.45e-21 94.0
MS.gene92376.t1 AT4G12560 28.981 314 192 14 7 299 1 304 5.45e-21 94.0
MS.gene92376.t1 AT4G12560 28.981 314 192 14 7 299 1 304 5.45e-21 94.0
MS.gene92376.t1 AT3G18910 25.649 308 203 12 9 300 7 304 3.64e-17 82.4
MS.gene92376.t1 AT3G10430 27.852 298 159 15 10 285 5 268 2.65e-15 77.0
MS.gene92376.t1 AT3G16210 27.551 294 183 13 10 300 5 271 8.80e-15 75.1
MS.gene92376.t1 AT3G07870 23.757 362 224 13 10 334 28 374 1.76e-13 71.6
MS.gene92376.t1 AT3G21410 26.885 305 177 16 9 294 37 314 2.29e-13 71.2
MS.gene92376.t1 AT1G12870 22.917 384 248 18 10 363 33 398 1.25e-12 68.9
MS.gene92376.t1 AT1G12855 26.122 245 134 11 10 219 71 303 2.98e-12 68.2
MS.gene92376.t1 AT1G33530 25.000 304 189 12 4 295 91 367 3.89e-12 67.8
MS.gene92376.t1 AT3G44120 27.184 309 188 13 10 298 6 297 9.33e-12 66.2
MS.gene92376.t1 AT1G32600 27.465 142 86 5 109 248 47 173 1.24e-11 65.1
MS.gene92376.t1 AT2G40925 22.654 309 204 11 10 298 27 320 1.47e-11 65.9
MS.gene92376.t1 AT4G19930 25.070 359 225 13 7 338 40 381 2.86e-11 65.1
MS.gene92376.t1 AT4G21240 25.974 308 172 17 9 286 35 316 3.02e-11 64.7
MS.gene92376.t1 AT1G47790 24.333 300 188 12 3 289 21 294 3.06e-11 64.7
MS.gene92376.t1 AT3G21120 24.906 265 153 12 10 250 3 245 3.56e-11 64.3
MS.gene92376.t1 AT3G52320 24.204 314 196 11 10 304 27 317 6.68e-11 63.5
MS.gene92376.t1 AT3G19410 26.687 326 193 15 10 318 6 302 9.28e-11 63.2

Find 68 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCTTAGTATTAGCTAATT+TGG 0.070994 5.1:-160223 None:intergenic
CCCCATGATCTTCAATTTAA+AGG 0.126204 5.1:+160018 MS.gene92376:CDS
CGAAATTATTTCTATGGTTT+TGG 0.137317 5.1:+160150 MS.gene92376:CDS
AATTGTGATGTGTGGGTATT+TGG 0.202909 5.1:+160483 MS.gene92376:CDS
TTGGAGAATTTCTCAGTATA+TGG 0.237144 5.1:+160502 MS.gene92376:CDS
TGCTTAGTATTAGCTAATTT+GGG 0.241281 5.1:-160222 None:intergenic
TCGTATCGAAATTATTTCTA+TGG 0.245541 5.1:+160144 MS.gene92376:CDS
CTAATGATACACTTGAAATA+TGG 0.280671 5.1:+160538 MS.gene92376:CDS
CAATTACCTTTGTCTCGTTA+TGG 0.313224 5.1:+160117 MS.gene92376:CDS
CTGGTAAGCGAAGTAGGATT+TGG 0.323051 5.1:-159765 None:intergenic
GAAAATGTGAAAGTGCAAAA+TGG 0.333523 5.1:-159852 None:intergenic
GTCAACTGATGATTACTTCT+TGG 0.334048 5.1:+160182 MS.gene92376:CDS
AACAGAAGATGGATGGAAAT+TGG 0.341630 5.1:+160680 MS.gene92376:CDS
ATTAGCTAATACTAAGCATT+TGG 0.343978 5.1:+160227 MS.gene92376:CDS
TCAGTAGAGGAATTGATATA+AGG 0.357380 5.1:-160303 None:intergenic
AACCTTTAAATTGAAGATCA+TGG 0.378478 5.1:-160020 None:intergenic
GCTTCATAGTCAATATCAAT+TGG 0.392804 5.1:-160456 None:intergenic
AAACGAATAAGAGACTTAAC+TGG 0.393097 5.1:-159784 None:intergenic
ACTGATTACCCCAAAATAAC+AGG 0.399631 5.1:+160321 MS.gene92376:CDS
TGGAGAATTTCTCAGTATAT+GGG 0.404173 5.1:+160503 MS.gene92376:CDS
TGCCTTTGATTTAATCAAAA+GGG 0.415367 5.1:+160413 MS.gene92376:CDS
TTGCCTTTGATTTAATCAAA+AGG 0.422457 5.1:+160412 MS.gene92376:CDS
CAGTAGAGGAATTGATATAA+GGG 0.438574 5.1:-160302 None:intergenic
ATAGATAGACAATGACGATA+TGG 0.445555 5.1:-159931 None:intergenic
AGACAATGACGATATGGAAT+TGG 0.446305 5.1:-159925 None:intergenic
AAAATGTGAAAGTGCAAAAT+GGG 0.449731 5.1:-159851 None:intergenic
GGTGACAGTGACCAAGCTTA+AGG 0.452041 5.1:+160807 MS.gene92376:CDS
GAGTCTCTGCTTTCACTCCC+TGG 0.452167 5.1:+160786 MS.gene92376:CDS
ACCTTTAAATTGAAGATCAT+GGG 0.460143 5.1:-160019 None:intergenic
AATACAAAGTGCATTCCTCT+TGG 0.461402 5.1:+160571 MS.gene92376:CDS
AAGTGCAAAATGGGTATCAT+TGG 0.467363 5.1:-159842 None:intergenic
ATTTCTCAGTATATGGGCTA+TGG 0.479112 5.1:+160509 MS.gene92376:CDS
GATATCATTGGAACAGAAGA+TGG 0.479823 5.1:+160669 MS.gene92376:CDS
GGGGTACATAAAATAAATGC+TGG 0.490025 5.1:-159998 None:intergenic
TATTGGGGAAAACAGCTTAG+TGG 0.491914 5.1:-160628 None:intergenic
TGTTTATGAAATCCAGTGGA+TGG 0.494690 5.1:-160096 None:intergenic
TTGTGTCATCTCCTTAAGCT+TGG 0.494818 5.1:-160818 None:intergenic
TCAAACGCGTTTGTAAGTCT+TGG 0.496074 5.1:+159806 MS.gene92376:CDS
TAATGATACACTTGAAATAT+GGG 0.496908 5.1:+160539 MS.gene92376:CDS
CTTCATAGTCAATATCAATT+GGG 0.498545 5.1:-160455 None:intergenic
TAAGCTTGGTCACTGTCACC+AGG 0.500905 5.1:-160804 None:intergenic
TAATACATGGAAAGAAATTG+AGG 0.507096 5.1:+160269 MS.gene92376:CDS
ACTTAACTGGTAAGCGAAGT+AGG 0.511913 5.1:-159771 None:intergenic
TCTCATTCAGAGCTAATACA+TGG 0.515391 5.1:+160256 MS.gene92376:CDS
ATTTGGATGATCAATTCAAA+AGG 0.520859 5.1:-159748 None:intergenic
CAATTTAAAGGTTCTTGTAG+AGG 0.527315 5.1:+160030 MS.gene92376:CDS
CTCTGTATAAAGAGCCACTT+CGG 0.548132 5.1:-160766 None:intergenic
TATATATGGAATCCATCCAC+TGG 0.555167 5.1:+160084 MS.gene92376:CDS
TCGTCACGATCATTTACGAA+TGG 0.560012 5.1:+160380 MS.gene92376:CDS
AATACATGGAAAGAAATTGA+GGG 0.567862 5.1:+160270 MS.gene92376:CDS
TCATTGGAACAGAAGATGGA+TGG 0.571754 5.1:+160673 MS.gene92376:CDS
CATAAAATAAATGCTGGAGG+AGG 0.577645 5.1:-159992 None:intergenic
TACTATTCTGACAGTACACA+TGG 0.588984 5.1:+160741 MS.gene92376:CDS
AAGCTTGGTCACTGTCACCA+GGG 0.590911 5.1:-160803 None:intergenic
GCTTAGTATTAGCTAATTTG+GGG 0.600479 5.1:-160221 None:intergenic
AGCTACAAATTGTGATGTGT+GGG 0.604681 5.1:+160476 MS.gene92376:CDS
CCTTTAAATTGAAGATCATG+GGG 0.611314 5.1:-160018 None:intergenic
TTGGTAAAGTATAATGACAA+AGG 0.621999 5.1:+160699 MS.gene92376:CDS
AAGCTACAAATTGTGATGTG+TGG 0.622283 5.1:+160475 MS.gene92376:CDS
ACAAAGGACAGTTGATAGAG+TGG 0.633105 5.1:+160715 MS.gene92376:CDS
AGTGAGTGTTGCAGTTGAAG+AGG 0.639070 5.1:-159881 None:intergenic
TAATTGTTTATGAAATCCAG+TGG 0.646923 5.1:-160100 None:intergenic
AGCATATACATTGCAGACGT+AGG 0.648430 5.1:-159724 None:intergenic
GAGGAACCATAACGAGACAA+AGG 0.654923 5.1:-160123 None:intergenic
CAGTACACATGGAACCGAAG+TGG 0.667775 5.1:+160752 MS.gene92376:CDS
GTACATAAAATAAATGCTGG+AGG 0.704444 5.1:-159995 None:intergenic
CTTTAAATTGAAGATCATGG+GGG 0.721953 5.1:-160017 None:intergenic
ATAGAAATAATTTCGATACG+AGG 0.746208 5.1:-160142 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATGATACACTTGAAATAT+GGG + chr5.1:160539-160558 MS.gene92376:CDS 20.0%
!!! GAAATTATTTCTATGGTTTT+GGG + chr5.1:160151-160170 MS.gene92376:CDS 20.0%
! AACCTTTAAATTGAAGATCA+TGG - chr5.1:160023-160042 None:intergenic 25.0%
! AATACATGGAAAGAAATTGA+GGG + chr5.1:160270-160289 MS.gene92376:CDS 25.0%
! ACCTTTAAATTGAAGATCAT+GGG - chr5.1:160022-160041 None:intergenic 25.0%
! ATAGAAATAATTTCGATACG+AGG - chr5.1:160145-160164 None:intergenic 25.0%
! ATGCTTAGTATTAGCTAATT+TGG - chr5.1:160226-160245 None:intergenic 25.0%
! ATTAGCTAATACTAAGCATT+TGG + chr5.1:160227-160246 MS.gene92376:CDS 25.0%
! ATTTGGATGATCAATTCAAA+AGG - chr5.1:159751-159770 None:intergenic 25.0%
! CTAATGATACACTTGAAATA+TGG + chr5.1:160538-160557 MS.gene92376:CDS 25.0%
! CTTCATAGTCAATATCAATT+GGG - chr5.1:160458-160477 None:intergenic 25.0%
! TAATACATGGAAAGAAATTG+AGG + chr5.1:160269-160288 MS.gene92376:CDS 25.0%
! TAATTGTTTATGAAATCCAG+TGG - chr5.1:160103-160122 None:intergenic 25.0%
! TGCTTAGTATTAGCTAATTT+GGG - chr5.1:160225-160244 None:intergenic 25.0%
! TTGGTAAAGTATAATGACAA+AGG + chr5.1:160699-160718 MS.gene92376:CDS 25.0%
!! AAAATGTGAAAGTGCAAAAT+GGG - chr5.1:159854-159873 None:intergenic 25.0%
!! ACTTTTTGTAGAACATATTG+GGG - chr5.1:160646-160665 None:intergenic 25.0%
!! GTTCTTTTGACATCTATATA+TGG + chr5.1:160070-160089 MS.gene92376:CDS 25.0%
!! TGCCTTTGATTTAATCAAAA+GGG + chr5.1:160413-160432 MS.gene92376:CDS 25.0%
!! TTGCCTTTGATTTAATCAAA+AGG + chr5.1:160412-160431 MS.gene92376:CDS 25.0%
!!! CACTTTTTGTAGAACATATT+GGG - chr5.1:160647-160666 None:intergenic 25.0%
!!! CGAAATTATTTCTATGGTTT+TGG + chr5.1:160150-160169 MS.gene92376:CDS 25.0%
!!! TCGTATCGAAATTATTTCTA+TGG + chr5.1:160144-160163 MS.gene92376:CDS 25.0%
!!! TTCCCTTTTGATTAAATCAA+AGG - chr5.1:160418-160437 None:intergenic 25.0%
AAACGAATAAGAGACTTAAC+TGG - chr5.1:159787-159806 None:intergenic 30.0%
ACAAAAAGTGGTGATATCAT+TGG + chr5.1:160657-160676 MS.gene92376:CDS 30.0%
ATAGATAGACAATGACGATA+TGG - chr5.1:159934-159953 None:intergenic 30.0%
CAATTTAAAGGTTCTTGTAG+AGG + chr5.1:160030-160049 MS.gene92376:CDS 30.0%
CAGTAGAGGAATTGATATAA+GGG - chr5.1:160305-160324 None:intergenic 30.0%
CCAATATGTTCTACAAAAAG+TGG + chr5.1:160645-160664 MS.gene92376:CDS 30.0%
CCTTTAAATTGAAGATCATG+GGG - chr5.1:160021-160040 None:intergenic 30.0%
CTTTAAATTGAAGATCATGG+GGG - chr5.1:160020-160039 None:intergenic 30.0%
GCTTAGTATTAGCTAATTTG+GGG - chr5.1:160224-160243 None:intergenic 30.0%
GCTTCATAGTCAATATCAAT+TGG - chr5.1:160459-160478 None:intergenic 30.0%
GTACATAAAATAAATGCTGG+AGG - chr5.1:159998-160017 None:intergenic 30.0%
TCAGTAGAGGAATTGATATA+AGG - chr5.1:160306-160325 None:intergenic 30.0%
TGGAGAATTTCTCAGTATAT+GGG + chr5.1:160503-160522 MS.gene92376:CDS 30.0%
TTGGAGAATTTCTCAGTATA+TGG + chr5.1:160502-160521 MS.gene92376:CDS 30.0%
! ACTCGTAGAATCATTTTCAT+TGG + chr5.1:159901-159920 MS.gene92376:CDS 30.0%
! ATAACAGGCTCTCTTTTTAA+TGG + chr5.1:160336-160355 MS.gene92376:CDS 30.0%
! GAAAATGTGAAAGTGCAAAA+TGG - chr5.1:159855-159874 None:intergenic 30.0%
! TAACAGGCTCTCTTTTTAAT+GGG + chr5.1:160337-160356 MS.gene92376:CDS 30.0%
! TTTTTAATGGGGCTATTCAT+TGG + chr5.1:160349-160368 MS.gene92376:CDS 30.0%
!! AAAAAGAGAGCCTGTTATTT+TGG - chr5.1:160334-160353 None:intergenic 30.0%
!!! AAAAGAGAGCCTGTTATTTT+GGG - chr5.1:160333-160352 None:intergenic 30.0%
!!! ACTCTTGTTTTGTCTATTGA+CGG + chr5.1:160600-160619 MS.gene92376:CDS 30.0%
!!! CCACTTTTTGTAGAACATAT+TGG - chr5.1:160648-160667 None:intergenic 30.0%
AACAGAAGATGGATGGAAAT+TGG + chr5.1:160680-160699 MS.gene92376:CDS 35.0%
AAGCTACAAATTGTGATGTG+TGG + chr5.1:160475-160494 MS.gene92376:CDS 35.0%
AAGTGCAAAATGGGTATCAT+TGG - chr5.1:159845-159864 None:intergenic 35.0%
AATACAAAGTGCATTCCTCT+TGG + chr5.1:160571-160590 MS.gene92376:CDS 35.0%
AATTGTGATGTGTGGGTATT+TGG + chr5.1:160483-160502 MS.gene92376:CDS 35.0%
ACTGATTACCCCAAAATAAC+AGG + chr5.1:160321-160340 MS.gene92376:CDS 35.0%
AGACAATGACGATATGGAAT+TGG - chr5.1:159928-159947 None:intergenic 35.0%
AGCTACAAATTGTGATGTGT+GGG + chr5.1:160476-160495 MS.gene92376:CDS 35.0%
CAATTACCTTTGTCTCGTTA+TGG + chr5.1:160117-160136 MS.gene92376:CDS 35.0%
CATAAAATAAATGCTGGAGG+AGG - chr5.1:159995-160014 None:intergenic 35.0%
CCCCATGATCTTCAATTTAA+AGG + chr5.1:160018-160037 MS.gene92376:CDS 35.0%
GATATCATTGGAACAGAAGA+TGG + chr5.1:160669-160688 MS.gene92376:CDS 35.0%
GGGGTACATAAAATAAATGC+TGG - chr5.1:160001-160020 None:intergenic 35.0%
GTCAACTGATGATTACTTCT+TGG + chr5.1:160182-160201 MS.gene92376:CDS 35.0%
TACTATTCTGACAGTACACA+TGG + chr5.1:160741-160760 MS.gene92376:CDS 35.0%
TATATATGGAATCCATCCAC+TGG + chr5.1:160084-160103 MS.gene92376:CDS 35.0%
TCTCATTCAGAGCTAATACA+TGG + chr5.1:160256-160275 MS.gene92376:CDS 35.0%
TGTTTATGAAATCCAGTGGA+TGG - chr5.1:160099-160118 None:intergenic 35.0%
! AACAAGAGTTTTTGTCCAAG+AGG - chr5.1:160589-160608 None:intergenic 35.0%
! AACAGGCTCTCTTTTTAATG+GGG + chr5.1:160338-160357 MS.gene92376:CDS 35.0%
! AGAGGCTTTTTACTTCTTCA+CGG + chr5.1:160048-160067 MS.gene92376:CDS 35.0%
! ATTTCTCAGTATATGGGCTA+TGG + chr5.1:160509-160528 MS.gene92376:CDS 35.0%
!! TGACTTCGAAGCATCTTTTA+AGG + chr5.1:159954-159973 MS.gene92376:CDS 35.0%
!!! AAAGAGAGCCTGTTATTTTG+GGG - chr5.1:160332-160351 None:intergenic 35.0%
!!! TATTTTGGGGTAATCAGTAG+AGG - chr5.1:160319-160338 None:intergenic 35.0%
!!! TTTCTATGGTTTTGGGTATG+AGG + chr5.1:160158-160177 MS.gene92376:CDS 35.0%
ACTTAACTGGTAAGCGAAGT+AGG - chr5.1:159774-159793 None:intergenic 40.0%
AGCATATACATTGCAGACGT+AGG - chr5.1:159727-159746 None:intergenic 40.0%
CTCTGTATAAAGAGCCACTT+CGG - chr5.1:160769-160788 None:intergenic 40.0%
TATTGGGGAAAACAGCTTAG+TGG - chr5.1:160631-160650 None:intergenic 40.0%
TCAAACGCGTTTGTAAGTCT+TGG + chr5.1:159806-159825 MS.gene92376:CDS 40.0%
TCATTGGAACAGAAGATGGA+TGG + chr5.1:160673-160692 MS.gene92376:CDS 40.0%
TCGTCACGATCATTTACGAA+TGG + chr5.1:160380-160399 MS.gene92376:CDS 40.0%
!! ACAAAGGACAGTTGATAGAG+TGG + chr5.1:160715-160734 MS.gene92376:CDS 40.0%
CTGGTAAGCGAAGTAGGATT+TGG - chr5.1:159768-159787 None:intergenic 45.0%
GAGGAACCATAACGAGACAA+AGG - chr5.1:160126-160145 None:intergenic 45.0%
! AGTGAGTGTTGCAGTTGAAG+AGG - chr5.1:159884-159903 None:intergenic 45.0%
AAGCTTGGTCACTGTCACCA+GGG - chr5.1:160806-160825 None:intergenic 50.0%
CAGTACACATGGAACCGAAG+TGG + chr5.1:160752-160771 MS.gene92376:CDS 50.0%
TAAGCTTGGTCACTGTCACC+AGG - chr5.1:160807-160826 None:intergenic 50.0%
GAGTCTCTGCTTTCACTCCC+TGG + chr5.1:160786-160805 MS.gene92376:CDS 55.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 159718 160827 159718 ID=MS.gene92376
chr5.1 mRNA 159718 160827 159718 ID=MS.gene92376.t1;Parent=MS.gene92376
chr5.1 exon 159718 160827 159718 ID=MS.gene92376.t1.exon1;Parent=MS.gene92376.t1
chr5.1 CDS 159718 160827 159718 ID=cds.MS.gene92376.t1;Parent=MS.gene92376.t1
Gene Sequence

>MS.gene92376

ATGGATCCTACGTCTGCAATGTATATGCTGCCTTTTGAATTGATCATCCAAATCCTACTTCGCTTACCAGTTAAGTCTCTTATTCGTTTCAAACGCGTTTGTAAGTCTTGGTTATCTCTCATCTCCAATGATACCCATTTTGCACTTTCACATTTTCAACTCACCTCTTCAACTGCAACACTCACTCGTAGAATCATTTTCATTGGACCAATTCCATATCGTCATTGTCTATCTATTGACTTCGAAGCATCTTTTAAGGATGATTCTTCTTATGCCTCCTCCAGCATTTATTTTATGTACCCCCATGATCTTCAATTTAAAGGTTCTTGTAGAGGCTTTTTACTTCTTCACGGTTCTTTTGACATCTATATATGGAATCCATCCACTGGATTTCATAAACAATTACCTTTGTCTCGTTATGGTTCCTCGTATCGAAATTATTTCTATGGTTTTGGGTATGAGGAGTCAACTGATGATTACTTCTTGGTGTCAATTTCTCATGACCCCAAATTAGCTAATACTAAGCATTTGGAGATTTTCTCATTCAGAGCTAATACATGGAAAGAAATTGAGGGTATTCACTGCCCTTATATCAATTCCTCTACTGATTACCCCAAAATAACAGGCTCTCTTTTTAATGGGGCTATTCATTGGTTTGCTTTTCGTCACGATCATTTACGAATGGATCTTATTCTTGCCTTTGATTTAATCAAAAGGGAACTTTTTGAGATTCATCTCCCAATTGATATTGACTATGAAGCTACAAATTGTGATGTGTGGGTATTTGGAGAATTTCTCAGTATATGGGCTATGGATTATGCTAATGATACACTTGAAATATGGGTGATGAAAGAATACAAAGTGCATTCCTCTTGGACAAAAACTCTTGTTTTGTCTATTGACGGCATTTCCACTAAGCTGTTTTCCCCAATATGTTCTACAAAAAGTGGTGATATCATTGGAACAGAAGATGGATGGAAATTGGTAAAGTATAATGACAAAGGACAGTTGATAGAGTGGCACTACTATTCTGACAGTACACATGGAACCGAAGTGGCTCTTTATACAGAGTCTCTGCTTTCACTCCCTGGTGACAGTGACCAAGCTTAA

Protein sequence

>MS.gene92376.t1

MDPTSAMYMLPFELIIQILLRLPVKSLIRFKRVCKSWLSLISNDTHFALSHFQLTSSTATLTRRIIFIGPIPYRHCLSIDFEASFKDDSSYASSSIYFMYPHDLQFKGSCRGFLLLHGSFDIYIWNPSTGFHKQLPLSRYGSSYRNYFYGFGYEESTDDYFLVSISHDPKLANTKHLEIFSFRANTWKEIEGIHCPYINSSTDYPKITGSLFNGAIHWFAFRHDHLRMDLILAFDLIKRELFEIHLPIDIDYEATNCDVWVFGEFLSIWAMDYANDTLEIWVMKEYKVHSSWTKTLVLSIDGISTKLFSPICSTKSGDIIGTEDGWKLVKYNDKGQLIEWHYYSDSTHGTEVALYTESLLSLPGDSDQA