AlfalfaGEDB | MS.gene033440

M. sativa cultivar XinJiangDaYe / MS.gene033440

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene033440.t1	XP_024628923.1	76.5	213	47	1	2	214	16	225	4.50E-87	330.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene033440.t1	G7L7F6	76.5	213	47	1	2	214	113	322	3.2e-87	330.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene033440	MS.gene034681	PPI
MS.gene063414	MS.gene033440	PPI
MS.gene033440	MS.gene57532	PPI
MS.gene033440	MS.gene033442	PPI
MS.gene036662	MS.gene033440	PPI
MS.gene033440	MS.gene009892	PPI
MS.gene87563	MS.gene033440	PPI
MS.gene57526	MS.gene033440	PPI
MS.gene033440	MS.gene058669	PPI
MS.gene033440	MS.gene066120	PPI
MS.gene051820	MS.gene033440	PPI
MS.gene97996	MS.gene033440	PPI
MS.gene033440	MS.gene035235	PPI
MS.gene58320	MS.gene033440	PPI
MS.gene81242	MS.gene033440	PPI
MS.gene26101	MS.gene033440	PPI
MS.gene27283	MS.gene033440	PPI
MS.gene033440	MS.gene041489	PPI
MS.gene64203	MS.gene033440	PPI
MS.gene045140	MS.gene033440	PPI
MS.gene033440	MS.gene024000	PPI
MS.gene033440	MS.gene034688	PPI
MS.gene024004	MS.gene033440	PPI
MS.gene42444	MS.gene033440	PPI
MS.gene033440	MS.gene24213	PPI
MS.gene51202	MS.gene033440	PPI
MS.gene033440	MS.gene033079	PPI
MS.gene87562	MS.gene033440	PPI
MS.gene033440	MS.gene034677	PPI
MS.gene033440	MS.gene055694	PPI
MS.gene033440	MS.gene059101	PPI
MS.gene40904	MS.gene033440	PPI
MS.gene033440	MS.gene035238	PPI
MS.gene033440	MS.gene064114	PPI
MS.gene033440	MS.gene87584	PPI
MS.gene87569	MS.gene033440	PPI
MS.gene064104	MS.gene033440	PPI
MS.gene033440	MS.gene58315	PPI
MS.gene041491	MS.gene033440	PPI
MS.gene033440	MS.gene80610	PPI
MS.gene033443	MS.gene033440	PPI
MS.gene059096	MS.gene033440	PPI
MS.gene033440	MS.gene90743	PPI
MS.gene57528	MS.gene033440	PPI
MS.gene50297	MS.gene033440	PPI
MS.gene006711	MS.gene033440	PPI
MS.gene033440	MS.gene85454	PPI
MS.gene27285	MS.gene033440	PPI
MS.gene064091	MS.gene033440	PPI
MS.gene033440	MS.gene036556	PPI
MS.gene064112	MS.gene033440	PPI
MS.gene045476	MS.gene033440	PPI
MS.gene24208	MS.gene033440	PPI
MS.gene033440	MS.gene033443	PPI
MS.gene50307	MS.gene033440	PPI
MS.gene033440	MS.gene27319	PPI
MS.gene43796	MS.gene033440	PPI
MS.gene034690	MS.gene033440	PPI
MS.gene96407	MS.gene033440	PPI
MS.gene77857	MS.gene033440	PPI
MS.gene033440	MS.gene058701	PPI
MS.gene51191	MS.gene033440	PPI
MS.gene033440	MS.gene064083	PPI
MS.gene033440	MS.gene58783	PPI
MS.gene033440	MS.gene024420	PPI
MS.gene033430	MS.gene033440	PPI
MS.gene50298	MS.gene033440	PPI
MS.gene033440	MS.gene024008	PPI
MS.gene033440	MS.gene50337	PPI
MS.gene67687	MS.gene033440	PPI
MS.gene033440	MS.gene54541	PPI
MS.gene033440	MS.gene39265	PPI
MS.gene036583	MS.gene033440	PPI
MS.gene033440	MS.gene060368	PPI
MS.gene033440	MS.gene053299	PPI
MS.gene033440	MS.gene28758	PPI
MS.gene033440	MS.gene044429	PPI
MS.gene033440	MS.gene42451	PPI
MS.gene71159	MS.gene033440	PPI
MS.gene96448	MS.gene033440	PPI
MS.gene77858	MS.gene033440	PPI
MS.gene058692	MS.gene033440	PPI
MS.gene041392	MS.gene033440	PPI
MS.gene033440	MS.gene69307	PPI
MS.gene033083	MS.gene033440	PPI
MS.gene69309	MS.gene033440	PPI
MS.gene63658	MS.gene033440	PPI
MS.gene033081	MS.gene033440	PPI
MS.gene033440	MS.gene033431	PPI
MS.gene031591	MS.gene033440	PPI
MS.gene035262	MS.gene033440	PPI
MS.gene033440	MS.gene034762	PPI
MS.gene070461	MS.gene033440	PPI
MS.gene033440	MS.gene59943	PPI
MS.gene51199	MS.gene033440	PPI
MS.gene033440	MS.gene67501	PPI
MS.gene033440	MS.gene96406	PPI
MS.gene87559	MS.gene033440	PPI
MS.gene033440	MS.gene035262	PPI
MS.gene033440	MS.gene028390	PPI
MS.gene033431	MS.gene033440	PPI
MS.gene033440	MS.gene40878	PPI
MS.gene033440	MS.gene44428	PPI
MS.gene041475	MS.gene033440	PPI
MS.gene033441	MS.gene033440	PPI
MS.gene033440	MS.gene058703	PPI
MS.gene063826	MS.gene033440	PPI
MS.gene033440	MS.gene012215	PPI
MS.gene060367	MS.gene033440	PPI
MS.gene44892	MS.gene033440	PPI
MS.gene58239	MS.gene033440	PPI
MS.gene033440	MS.gene22715	PPI
MS.gene033440	MS.gene58316	PPI
MS.gene57531	MS.gene033440	PPI
MS.gene064111	MS.gene033440	PPI
MS.gene033440	MS.gene51207	PPI
MS.gene033440	MS.gene58321	PPI
MS.gene26829	MS.gene033440	PPI
MS.gene39262	MS.gene033440	PPI
MS.gene053256	MS.gene033440	PPI
MS.gene033440	MS.gene87564	PPI
MS.gene033440	MS.gene36595	PPI
MS.gene75875	MS.gene033440	PPI
MS.gene033440	MS.gene024004	PPI
MS.gene033440	MS.gene045140	PPI
MS.gene058694	MS.gene033440	PPI
MS.gene54049	MS.gene033440	PPI
MS.gene033440	MS.gene061240	PPI
MS.gene43789	MS.gene033440	PPI
MS.gene033440	MS.gene041473	PPI
MS.gene006710	MS.gene033440	PPI
MS.gene033440	MS.gene50311	PPI
MS.gene072177	MS.gene033440	PPI
MS.gene58722	MS.gene033440	PPI
MS.gene033440	MS.gene058989	PPI
MS.gene033440	MS.gene57538	PPI
MS.gene033440	MS.gene041468	PPI
MS.gene033440	MS.gene058693	PPI
MS.gene64001	MS.gene033440	PPI
MS.gene033440	MS.gene041395	PPI
MS.gene033440	MS.gene42447	PPI
MS.gene58312	MS.gene033440	PPI
MS.gene36704	MS.gene033440	PPI
MS.gene032970	MS.gene033440	PPI
MS.gene033440	MS.gene51189	PPI
MS.gene033440	MS.gene046958	PPI
MS.gene77856	MS.gene033440	PPI
MS.gene033440	MS.gene24286	PPI
MS.gene58313	MS.gene033440	PPI
MS.gene033440	MS.gene044425	PPI
MS.gene066622	MS.gene033440	PPI
MS.gene44887	MS.gene033440	PPI
MS.gene85043	MS.gene033440	PPI
MS.gene63655	MS.gene033440	PPI
MS.gene44883	MS.gene033440	PPI
MS.gene033440	MS.gene40988	PPI
MS.gene033440	MS.gene24173	PPI
MS.gene033440	MS.gene036584	PPI
MS.gene033440	MS.gene036662	PPI
MS.gene88780	MS.gene033440	PPI
MS.gene41046	MS.gene033440	PPI
MS.gene87588	MS.gene033440	PPI
MS.gene017412	MS.gene033440	PPI
MS.gene033440	MS.gene27022	PPI
MS.gene80884	MS.gene033440	PPI
MS.gene033440	MS.gene035261	PPI
MS.gene033440	MS.gene87585	PPI
MS.gene51192	MS.gene033440	PPI
MS.gene033440	MS.gene023999	PPI
MS.gene009883	MS.gene033440	PPI
MS.gene58317	MS.gene033440	PPI
MS.gene044563	MS.gene033440	PPI
MS.gene069075	MS.gene033440	PPI
MS.gene033427	MS.gene033440	PPI
MS.gene033440	MS.gene036581	PPI
MS.gene033440	MS.gene019507	PPI
MS.gene40985	MS.gene033440	PPI
MS.gene041474	MS.gene033440	PPI
MS.gene27020	MS.gene033440	PPI
MS.gene033440	MS.gene000036	PPI
MS.gene033440	MS.gene50320	PPI
MS.gene041388	MS.gene033440	PPI
MS.gene033440	MS.gene58314	PPI
MS.gene033440	MS.gene87557	PPI
MS.gene062698	MS.gene033440	PPI
MS.gene57536	MS.gene033440	PPI
MS.gene96126	MS.gene033440	PPI
MS.gene033440	MS.gene035263	PPI
MS.gene019503	MS.gene033440	PPI
MS.gene51208	MS.gene033440	PPI
MS.gene016524	MS.gene033440	PPI
MS.gene033440	MS.gene053257	PPI
MS.gene50304	MS.gene033440	PPI
MS.gene033440	MS.gene77858	PPI
MS.gene033440	MS.gene51201	PPI
MS.gene045475	MS.gene033440	PPI
MS.gene033440	MS.gene50336	PPI
MS.gene59943	MS.gene033440	PPI
MS.gene90744	MS.gene033440	PPI
MS.gene51204	MS.gene033440	PPI
MS.gene31587	MS.gene033440	PPI
MS.gene033440	MS.gene77704	PPI
MS.gene036557	MS.gene033440	PPI
MS.gene041393	MS.gene033440	PPI
MS.gene033440	MS.gene047279	PPI
MS.gene033440	MS.gene50305	PPI
MS.gene033440	MS.gene032969	PPI
MS.gene84698	MS.gene033440	PPI
MS.gene033440	MS.gene68890	PPI
MS.gene009891	MS.gene033440	PPI
MS.gene033440	MS.gene42445	PPI
MS.gene066641	MS.gene033440	PPI
MS.gene82082	MS.gene033440	PPI
MS.gene033440	MS.gene86273	PPI
MS.gene033440	MS.gene036663	PPI
MS.gene033440	MS.gene26830	PPI
MS.gene000038	MS.gene033440	PPI
MS.gene033440	MS.gene63657	PPI
MS.gene033440	MS.gene059157	PPI
MS.gene033440	MS.gene023996	PPI
MS.gene57535	MS.gene033440	PPI
MS.gene025887	MS.gene033440	PPI
MS.gene033440	MS.gene045473	PPI
MS.gene033440	MS.gene50301	PPI
MS.gene041470	MS.gene033440	PPI
MS.gene033440	MS.gene070462	PPI
MS.gene87200	MS.gene033440	PPI
MS.gene033440	MS.gene031590	PPI
MS.gene015089	MS.gene033440	PPI
MS.gene033440	MS.gene066623	PPI
MS.gene033440	MS.gene064086	PPI
MS.gene033440	MS.gene035234	PPI
MS.gene033440	MS.gene064090	PPI
MS.gene44885	MS.gene033440	PPI
MS.gene011679	MS.gene033440	PPI
MS.gene033440	MS.gene58317	PPI
MS.gene060370	MS.gene033440	PPI
MS.gene066635	MS.gene033440	PPI
MS.gene033440	MS.gene90742	PPI
MS.gene57533	MS.gene033440	PPI
MS.gene033440	MS.gene24212	PPI
MS.gene033440	MS.gene50332	PPI
MS.gene033440	MS.gene024979	PPI
MS.gene87586	MS.gene033440	PPI
MS.gene033440	MS.gene24826	PPI
MS.gene40887	MS.gene033440	PPI
MS.gene033440	MS.gene43790	PPI
MS.gene50339	MS.gene033440	PPI
MS.gene046958	MS.gene033440	PPI
MS.gene060366	MS.gene033440	PPI
MS.gene033440	MS.gene59637	PPI
MS.gene57529	MS.gene033440	PPI
MS.gene033440	MS.gene88416	PPI
MS.gene033440	MS.gene57530	PPI
MS.gene033440	MS.gene003076	PPI
MS.gene033440	MS.gene024009	PPI
MS.gene033440	MS.gene036599	PPI
MS.gene40902	MS.gene033440	PPI
MS.gene033440	MS.gene006705	PPI
MS.gene27051	MS.gene033440	PPI
MS.gene033440	MS.gene061241	PPI
MS.gene021553	MS.gene033440	PPI
MS.gene033440	MS.gene035237	PPI
MS.gene26957	MS.gene033440	PPI
MS.gene060368	MS.gene033440	PPI
MS.gene033875	MS.gene033440	PPI
MS.gene033440	MS.gene51188	PPI
MS.gene036582	MS.gene033440	PPI
MS.gene27021	MS.gene033440	PPI
MS.gene066620	MS.gene033440	PPI
MS.gene035236	MS.gene033440	PPI
MS.gene033440	MS.gene38220	PPI
MS.gene033440	MS.gene40986	PPI
MS.gene033440	MS.gene50309	PPI
MS.gene033440	MS.gene041394	PPI
MS.gene58781	MS.gene033440	PPI
MS.gene033440	MS.gene03060	PPI
MS.gene028390	MS.gene033440	PPI
MS.gene011106	MS.gene033440	PPI
MS.gene033440	MS.gene036664	PPI
MS.gene62398	MS.gene033440	PPI
MS.gene033440	MS.gene024011	PPI
MS.gene60027	MS.gene033440	PPI
MS.gene033440	MS.gene58241	PPI
MS.gene44886	MS.gene033440	PPI
MS.gene033440	MS.gene064109	PPI
MS.gene038756	MS.gene033440	PPI
MS.gene033440	MS.gene058696	PPI
MS.gene88776	MS.gene033440	PPI
MS.gene033440	MS.gene009893	PPI
MS.gene35068	MS.gene033440	PPI
MS.gene033440	MS.gene85043	PPI
MS.gene041390	MS.gene033440	PPI
MS.gene24286	MS.gene033440	PPI
MS.gene92376	MS.gene033440	PPI
MS.gene000035	MS.gene033440	PPI
MS.gene50329	MS.gene033440	PPI
MS.gene31637	MS.gene033440	PPI
MS.gene87573	MS.gene033440	PPI
MS.gene57537	MS.gene033440	PPI
MS.gene033440	MS.gene033083	PPI
MS.gene019504	MS.gene033440	PPI
MS.gene034762	MS.gene033440	PPI
MS.gene059156	MS.gene033440	PPI
MS.gene033440	MS.gene40886	PPI
MS.gene58716	MS.gene033440	PPI
MS.gene033440	MS.gene68580	PPI
MS.gene033444	MS.gene033440	PPI
MS.gene019505	MS.gene033440	PPI
MS.gene50306	MS.gene033440	PPI
MS.gene033440	MS.gene041391	PPI
MS.gene58785	MS.gene033440	PPI
MS.gene033440	MS.gene57525	PPI
MS.gene066639	MS.gene033440	PPI
MS.gene26949	MS.gene033440	PPI
MS.gene033440	MS.gene030114	PPI
MS.gene50309	MS.gene033440	PPI
MS.gene036760	MS.gene033440	PPI
MS.gene033440	MS.gene045474	PPI
MS.gene58311	MS.gene033440	PPI
MS.gene033440	MS.gene036558	PPI
MS.gene57527	MS.gene033440	PPI
MS.gene033440	MS.gene87554	PPI
MS.gene033440	MS.gene009891	PPI
MS.gene033432	MS.gene033440	PPI
MS.gene033440	MS.gene27051	PPI
MS.gene033440	MS.gene40984	PPI
MS.gene033440	MS.gene064108	PPI
MS.gene033440	MS.gene048193	PPI
MS.gene033426	MS.gene033440	PPI
MS.gene59639	MS.gene033440	PPI
MS.gene033440	MS.gene016220	PPI
MS.gene50327	MS.gene033440	PPI
MS.gene035261	MS.gene033440	PPI
MS.gene010758	MS.gene033440	PPI
MS.gene063670	MS.gene033440	PPI
MS.gene57530	MS.gene033440	PPI
MS.gene033440	MS.gene58240	PPI
MS.gene019506	MS.gene033440	PPI
MS.gene50326	MS.gene033440	PPI
MS.gene033440	MS.gene27284	PPI
MS.gene033440	MS.gene063472	PPI
MS.gene51200	MS.gene033440	PPI
MS.gene033440	MS.gene57717	PPI
MS.gene033440	MS.gene034680	PPI
MS.gene033440	MS.gene48221	PPI
MS.gene024002	MS.gene033440	PPI
MS.gene033440	MS.gene50327	PPI
MS.gene033440	MS.gene066626	PPI
MS.gene88774	MS.gene033440	PPI
MS.gene033440	MS.gene063474	PPI
MS.gene034686	MS.gene033440	PPI
MS.gene033440	MS.gene51190	PPI
MS.gene40982	MS.gene033440	PPI
MS.gene033440	MS.gene58319	PPI
MS.gene42452	MS.gene033440	PPI
MS.gene033440	MS.gene044426	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene033440.t1	MTR_8g102520	76.526	213	47	1	2	214	113	322	6.81e-114	328
MS.gene033440.t1	MTR_7g079400	64.220	218	71	2	1	214	123	337	1.21e-94	280
MS.gene033440.t1	MTR_8g098830	74.706	170	42	1	19	188	32	200	5.06e-88	259
MS.gene033440.t1	MTR_7g079450	79.286	140	25	1	75	214	2	137	1.33e-76	227
MS.gene033440.t1	MTR_7g079370	57.346	211	89	1	1	211	144	353	7.47e-73	225
MS.gene033440.t1	MTR_2g048580	55.556	216	78	6	4	214	140	342	3.42e-68	213
MS.gene033440.t1	MTR_7g079420	60.440	182	62	5	39	214	967	1144	9.34e-60	202
MS.gene033440.t1	MTR_4g117720	45.045	222	104	8	1	214	167	378	1.52e-50	168
MS.gene033440.t1	MTR_1g055175	43.719	199	108	3	18	214	5	201	4.66e-48	156
MS.gene033440.t1	MTR_6g060650	46.296	216	101	8	1	213	169	372	4.19e-47	159
MS.gene033440.t1	MTR_4g109280	47.475	198	91	8	22	214	170	359	1.98e-45	154
MS.gene033440.t1	MTR_4g116320	43.396	212	109	6	1	209	50	253	1.40e-42	144
MS.gene033440.t1	MTR_4g094365	46.667	195	92	7	19	208	171	358	3.62e-41	143
MS.gene033440.t1	MTR_5g070088	45.455	198	98	6	22	214	194	386	1.05e-40	142
MS.gene033440.t1	MTR_4g116330	45.588	204	88	7	22	214	189	380	1.63e-40	142
MS.gene033440.t1	MTR_5g070080	46.114	193	93	6	22	210	196	381	3.30e-40	141
MS.gene033440.t1	MTR_4g023130	45.128	195	89	6	19	207	124	306	3.80e-40	139
MS.gene033440.t1	MTR_5g097210	44.503	191	97	6	22	209	174	358	4.17e-40	140
MS.gene033440.t1	MTR_4g109270	44.949	198	98	6	22	214	173	364	5.16e-40	140
MS.gene033440.t1	MTR_1g055135	42.268	194	109	2	24	214	182	375	7.05e-40	140
MS.gene033440.t1	MTR_5g070130	42.991	214	106	9	13	214	168	377	8.85e-40	140
MS.gene033440.t1	MTR_3g103020	43.216	199	101	6	22	214	186	378	1.62e-39	139
MS.gene033440.t1	MTR_4g118400	43.386	189	86	6	22	208	125	294	2.23e-39	137
MS.gene033440.t1	MTR_4g023080	44.792	192	88	6	22	207	168	347	2.32e-39	138
MS.gene033440.t1	MTR_1g055195	40.609	197	112	2	22	214	283	478	4.27e-39	140
MS.gene033440.t1	MTR_4g118380	44.633	177	85	4	19	186	185	357	9.64e-39	137
MS.gene033440.t1	MTR_8g433030	43.981	216	102	10	1	210	136	338	4.69e-38	134
MS.gene033440.t1	MTR_8g032390	43.981	216	102	10	1	210	169	371	8.79e-38	135
MS.gene033440.t1	MTR_4g118370	41.579	190	91	3	22	211	88	257	3.77e-37	130
MS.gene033440.t1	MTR_4g117750	43.077	195	101	3	22	209	163	354	7.71e-37	134
MS.gene033440.t1	MTR_4g117750	41.353	133	67	5	86	208	346	477	9.56e-15	72.8
MS.gene033440.t1	MTR_1g055165	42.941	170	93	3	47	214	151	318	9.78e-37	130
MS.gene033440.t1	MTR_4g122850	43.077	195	101	8	19	208	169	358	2.74e-36	131
MS.gene033440.t1	MTR_8g040935	39.713	209	108	9	15	214	9	208	5.60e-36	125
MS.gene033440.t1	MTR_4g021785	43.229	192	92	7	22	207	168	348	9.79e-36	129
MS.gene033440.t1	MTR_3g034180	41.294	201	101	6	22	213	296	488	1.50e-34	128
MS.gene033440.t1	MTR_6g463430	43.367	196	99	7	22	214	16	202	1.91e-34	122
MS.gene033440.t1	MTR_4g117850	38.318	214	118	7	1	207	167	373	4.69e-33	122
MS.gene033440.t1	MTR_3g034160	39.462	223	114	7	3	213	161	374	6.11e-33	122
MS.gene033440.t1	MTR_3g034130	39.888	178	86	5	22	187	182	350	2.47e-32	120
MS.gene033440.t1	MTR_4g023190	41.451	193	98	5	22	208	170	353	5.05e-32	119
MS.gene033440.t1	MTR_4g117530	37.563	197	83	6	20	214	95	253	6.28e-32	116
MS.gene033440.t1	MTR_8g433040	41.089	202	100	6	16	214	179	364	1.77e-31	118
MS.gene033440.t1	MTR_8g032380	41.089	202	100	6	16	214	179	364	1.77e-31	118
MS.gene033440.t1	MTR_4g117770	42.857	203	107	6	17	214	169	367	3.15e-31	117
MS.gene033440.t1	MTR_4g117810	42.857	203	107	6	17	214	169	367	3.15e-31	117
MS.gene033440.t1	MTR_4g117780	41.951	205	110	6	15	214	167	367	3.39e-31	117
MS.gene033440.t1	MTR_4g118360	48.333	120	61	1	90	208	1	120	4.67e-31	110
MS.gene033440.t1	MTR_4g023070	39.806	206	91	8	22	207	171	363	6.00e-31	117
MS.gene033440.t1	MTR_4g023120	40.099	202	96	8	22	207	171	363	6.22e-30	114
MS.gene033440.t1	MTR_1g055250	40.588	170	91	6	22	187	78	241	6.61e-30	113
MS.gene033440.t1	MTR_4g023200	39.583	192	102	7	23	208	171	354	2.04e-29	112
MS.gene033440.t1	MTR_4g023380	36.792	212	100	6	22	208	169	371	2.76e-28	109
MS.gene033440.t1	MTR_4g023150	38.776	196	100	6	22	208	170	354	7.17e-28	108
MS.gene033440.t1	MTR_4g023090	36.232	207	106	7	19	208	181	378	7.60e-28	108
MS.gene033440.t1	MTR_4g117870	37.313	201	71	8	22	214	114	267	2.28e-27	105
MS.gene033440.t1	MTR_4g116330	38.235	204	64	7	22	214	189	341	9.48e-26	102
MS.gene033440.t1	MTR_4g023440	33.824	204	87	6	13	214	175	332	4.41e-23	95.1
MS.gene033440.t1	MTR_5g023000	49.462	93	44	2	124	214	8	99	4.94e-20	81.6
MS.gene033440.t1	MTR_4g117430	46.809	94	43	3	22	115	65	151	1.05e-18	79.7
MS.gene033440.t1	MTR_4g122860	32.323	198	90	8	27	214	157	320	2.56e-18	82.0
MS.gene033440.t1	MTR_7g117720	48.980	98	41	4	119	209	177	272	5.42e-17	77.8
MS.gene033440.t1	MTR_8g013010	46.316	95	41	4	22	116	225	309	7.97e-15	72.0
MS.gene033440.t1	MTR_4g121580	31.401	207	102	9	1	204	170	339	4.21e-14	70.5
MS.gene033440.t1	MTR_6g021880	31.013	158	97	6	1	157	180	326	4.75e-14	70.5
MS.gene033440.t1	MTR_4g114700	32.474	194	65	7	22	205	81	218	4.97e-12	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 54 sgRNAs with CRISPR-Local

Find 56 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGATTCTCATTTGCCTTAT+AGG	0.110040	7.2:-25997290	MS.gene033440:CDS
TATTATTGCCTTTGATTTAA+AGG	0.116438	7.2:-25997172	MS.gene033440:CDS
ATTTATGATTTGATGGTATT+TGG	0.157846	7.2:-25997090	MS.gene033440:CDS
GGCAATAATAACATCGCTTT+TGG	0.269149	7.2:+25997185	None:intergenic
CCGACTCTGGGACCACCTTC+AGG	0.271870	7.2:+25997255	None:intergenic
TCTTAGAATTTATGATTTGA+TGG	0.287400	7.2:-25997097	MS.gene033440:CDS
TCTTGAATGGTTCTATTCAT+TGG	0.326345	7.2:-25997227	MS.gene033440:CDS
CTTTCACTCCCCAATGGCAC+TGG	0.329703	7.2:-25996787	MS.gene033440:CDS
GGGCTTGCAATATTCCTATA+AGG	0.347352	7.2:+25997276	None:intergenic
AGAGTTCTAAAATTAAGATA+TGG	0.380976	7.2:-25997041	MS.gene033440:CDS
CTCTGTATACACCGCCATTT+GGG	0.381496	7.2:+25996816	None:intergenic
GAATGGTTCTATTCATTGGC+TGG	0.382596	7.2:-25997223	MS.gene033440:CDS
CACGATTTGTAAAGCATACT+AGG	0.384246	7.2:+25996941	None:intergenic
ACTCTGTATACACCGCCATT+TGG	0.406867	7.2:+25996815	None:intergenic
CGACCACTATTAAAATCATC+TGG	0.411676	7.2:+25997123	None:intergenic
TAAGCTTGCCCAGTGCCATT+GGG	0.413531	7.2:+25996778	None:intergenic
TTGGCGGACTTATCAGTGTA+TGG	0.416802	7.2:-25997071	MS.gene033440:CDS
ACAAATCGTGGTGATATTGT+TGG	0.422110	7.2:-25996928	MS.gene033440:CDS
CTGAAGGTGGTCCCAGAGTC+GGG	0.433638	7.2:-25997254	MS.gene033440:CDS
TTAAGCTTGCCCAGTGCCAT+TGG	0.439492	7.2:+25996777	None:intergenic
CGACTCTGGGACCACCTTCA+GGG	0.442516	7.2:+25997256	None:intergenic
AATACGCAGTGCATTCATCT+TGG	0.467778	7.2:-25997008	MS.gene033440:CDS
TGTCATTTCCTTTAAATCAA+AGG	0.469429	7.2:+25997164	None:intergenic
ATTCAAGAATGACCCGACTC+TGG	0.470304	7.2:+25997242	None:intergenic
GGTATATAGTTCAATTGACT+TGG	0.492098	7.2:-25997355	MS.gene033440:CDS
GAGTTCTAAAATTAAGATAT+GGG	0.492351	7.2:-25997040	MS.gene033440:CDS
GCTAATCCACCATCAGCAAC+TGG	0.495868	7.2:+25996904	None:intergenic
TATGATTTGATGGTATTTGG+CGG	0.504914	7.2:-25997087	MS.gene033440:CDS
TTACTTTATGAGATCCCAAA+TGG	0.511111	7.2:-25996830	MS.gene033440:CDS
AGGAATATTGCAAGCCCTGA+AGG	0.512532	7.2:-25997270	MS.gene033440:CDS
CTGCAAGAGTATCATTCCTA+TGG	0.523562	7.2:-25996859	MS.gene033440:CDS
CTAGTATGCTTTACAAATCG+TGG	0.527578	7.2:-25996940	MS.gene033440:CDS
CCTGAAGGTGGTCCCAGAGT+CGG	0.527660	7.2:-25997255	MS.gene033440:CDS
AGAGTCGGGTCATTCTTGAA+TGG	0.540114	7.2:-25997240	MS.gene033440:CDS
TGAACTATATACCGAAGGAT+TGG	0.540403	7.2:+25997365	None:intergenic
TTCAAGAATGACCCGACTCT+GGG	0.541376	7.2:+25997243	None:intergenic
TTTCACTCCCCAATGGCACT+GGG	0.552642	7.2:-25996786	MS.gene033440:CDS
ATACAATTATACCAATCCTT+CGG	0.554537	7.2:-25997376	MS.gene033440:CDS
CTCATTGAGAGCTAATGAGT+GGG	0.557112	7.2:-25997325	MS.gene033440:CDS
GTTGGACCAGTTGCTGATGG+TGG	0.559934	7.2:-25996910	MS.gene033440:CDS
GATGATTACATGATAGTTGT+GGG	0.567568	7.2:-25997408	None:intergenic
ATTGTTGGACCAGTTGCTGA+TGG	0.574060	7.2:-25996913	MS.gene033440:CDS
AAGCTTGCCCAGTGCCATTG+GGG	0.576980	7.2:+25996779	None:intergenic
CATAAAGTAACGGTCACCAT+AGG	0.590340	7.2:+25996843	None:intergenic
TCTCATTGAGAGCTAATGAG+TGG	0.598081	7.2:-25997326	MS.gene033440:CDS
TGATGATTACATGATAGTTG+TGG	0.600343	7.2:-25997409	None:intergenic
ACGATTTGTAAAGCATACTA+GGG	0.611048	7.2:+25996942	None:intergenic
TCAATTGAACTATATACCGA+AGG	0.631122	7.2:+25997360	None:intergenic
TCTCTGCTTTCACTCCCCAA+TGG	0.640379	7.2:-25996793	MS.gene033440:CDS
TTTGGGATCTCATAAAGTAA+CGG	0.651607	7.2:+25996833	None:intergenic
TTAGCGAAGCTTAATGACAA+AGG	0.665656	7.2:-25996886	MS.gene033440:CDS
AATATTGCAAGCCCTGAAGG+TGG	0.669896	7.2:-25997267	MS.gene033440:CDS
CTTTATGAGATCCCAAATGG+CGG	0.702686	7.2:-25996827	MS.gene033440:CDS
ATGATTACATGATAGTTGTG+GGG	0.750346	7.2:-25997407	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TCTTAGAATTTATGATTTGA+TGG	-	chr7.2:25997079-25997098	MS.gene033440:CDS	20.0%
!!!	AGAGTTCTAAAATTAAGATA+TGG	-	chr7.2:25997135-25997154	MS.gene033440:CDS	20.0%
!!!	ATTTATGATTTGATGGTATT+TGG	-	chr7.2:25997086-25997105	MS.gene033440:CDS	20.0%
!!!	GAGTTCTAAAATTAAGATAT+GGG	-	chr7.2:25997136-25997155	MS.gene033440:CDS	20.0%
!!!	TATTATTGCCTTTGATTTAA+AGG	-	chr7.2:25997004-25997023	MS.gene033440:CDS	20.0%
!	ATACAATTATACCAATCCTT+CGG	-	chr7.2:25996800-25996819	MS.gene033440:CDS	25.0%
!!	TGTCATTTCCTTTAAATCAA+AGG	+	chr7.2:25997015-25997034	None:intergenic	25.0%
	ACGATTTGTAAAGCATACTA+GGG	+	chr7.2:25997237-25997256	None:intergenic	30.0%
	GGTATATAGTTCAATTGACT+TGG	-	chr7.2:25996821-25996840	MS.gene033440:CDS	30.0%
	TCAATTGAACTATATACCGA+AGG	+	chr7.2:25996819-25996838	None:intergenic	30.0%
	TTACTTTATGAGATCCCAAA+TGG	-	chr7.2:25997346-25997365	MS.gene033440:CDS	30.0%
	TTGATTCTCATTTGCCTTAT+AGG	-	chr7.2:25996886-25996905	MS.gene033440:CDS	30.0%
!	TATGATTTGATGGTATTTGG+CGG	-	chr7.2:25997089-25997108	MS.gene033440:CDS	30.0%
!	TCTTGAATGGTTCTATTCAT+TGG	-	chr7.2:25996949-25996968	MS.gene033440:CDS	30.0%
!	TTTGGGATCTCATAAAGTAA+CGG	+	chr7.2:25997346-25997365	None:intergenic	30.0%
!!	CTTCCAGATGATTTTAATAG+TGG	-	chr7.2:25997050-25997069	MS.gene033440:CDS	30.0%
	AAGCATACTAGGGAAAAATC+CGG	+	chr7.2:25997227-25997246	None:intergenic	35.0%
	ACAAATCGTGGTGATATTGT+TGG	-	chr7.2:25997248-25997267	MS.gene033440:CDS	35.0%
	CACGATTTGTAAAGCATACT+AGG	+	chr7.2:25997238-25997257	None:intergenic	35.0%
	CGACCACTATTAAAATCATC+TGG	+	chr7.2:25997056-25997075	None:intergenic	35.0%
	CTAGTATGCTTTACAAATCG+TGG	-	chr7.2:25997236-25997255	MS.gene033440:CDS	35.0%
	TGAACTATATACCGAAGGAT+TGG	+	chr7.2:25996814-25996833	None:intergenic	35.0%
	TTAGCGAAGCTTAATGACAA+AGG	-	chr7.2:25997290-25997309	MS.gene033440:CDS	35.0%
!	GGCAATAATAACATCGCTTT+TGG	+	chr7.2:25996994-25997013	None:intergenic	35.0%
	AATACGCAGTGCATTCATCT+TGG	-	chr7.2:25997168-25997187	MS.gene033440:CDS	40.0%
	CATAAAGTAACGGTCACCAT+AGG	+	chr7.2:25997336-25997355	None:intergenic	40.0%
	CTCATTGAGAGCTAATGAGT+GGG	-	chr7.2:25996851-25996870	MS.gene033440:CDS	40.0%
	CTTTATGAGATCCCAAATGG+CGG	-	chr7.2:25997349-25997368	MS.gene033440:CDS	40.0%
	GGGCTTGCAATATTCCTATA+AGG	+	chr7.2:25996903-25996922	None:intergenic	40.0%
	TCTCATTGAGAGCTAATGAG+TGG	-	chr7.2:25996850-25996869	MS.gene033440:CDS	40.0%
!	GAATGGTTCTATTCATTGGC+TGG	-	chr7.2:25996953-25996972	MS.gene033440:CDS	40.0%
!	TTTTTCTTTTCATCCCGCTC+CGG	-	chr7.2:25997205-25997224	MS.gene033440:CDS	40.0%
!!	CTGCAAGAGTATCATTCCTA+TGG	-	chr7.2:25997317-25997336	MS.gene033440:CDS	40.0%
	AATATTGCAAGCCCTGAAGG+TGG	-	chr7.2:25996909-25996928	MS.gene033440:CDS	45.0%
	ACTCTGTATACACCGCCATT+TGG	+	chr7.2:25997364-25997383	None:intergenic	45.0%
	AGAGTCGGGTCATTCTTGAA+TGG	-	chr7.2:25996936-25996955	MS.gene033440:CDS	45.0%
	AGGAATATTGCAAGCCCTGA+AGG	-	chr7.2:25996906-25996925	MS.gene033440:CDS	45.0%
	ATTCAAGAATGACCCGACTC+TGG	+	chr7.2:25996937-25996956	None:intergenic	45.0%
	ATTGTTGGACCAGTTGCTGA+TGG	-	chr7.2:25997263-25997282	MS.gene033440:CDS	45.0%
	CTCTGTATACACCGCCATTT+GGG	+	chr7.2:25997363-25997382	None:intergenic	45.0%
	TACTAGGGAAAAATCCGGAG+CGG	+	chr7.2:25997222-25997241	None:intergenic	45.0%
	TTCAAGAATGACCCGACTCT+GGG	+	chr7.2:25996936-25996955	None:intergenic	45.0%
!!	TTGGCGGACTTATCAGTGTA+TGG	-	chr7.2:25997105-25997124	MS.gene033440:CDS	45.0%
	ACTAGGGAAAAATCCGGAGC+GGG	+	chr7.2:25997221-25997240	None:intergenic	50.0%
	GCTAATCCACCATCAGCAAC+TGG	+	chr7.2:25997275-25997294	None:intergenic	50.0%
	TCTCTGCTTTCACTCCCCAA+TGG	-	chr7.2:25997383-25997402	MS.gene033440:CDS	50.0%
	TTAAGCTTGCCCAGTGCCAT+TGG	+	chr7.2:25997402-25997421	None:intergenic	50.0%
	TTTCACTCCCCAATGGCACT+GGG	-	chr7.2:25997390-25997409	MS.gene033440:CDS	50.0%
!	TAAGCTTGCCCAGTGCCATT+GGG	+	chr7.2:25997401-25997420	None:intergenic	50.0%
	CTTTCACTCCCCAATGGCAC+TGG	-	chr7.2:25997389-25997408	MS.gene033440:CDS	55.0%
	GTTGGACCAGTTGCTGATGG+TGG	-	chr7.2:25997266-25997285	MS.gene033440:CDS	55.0%
!	AAGCTTGCCCAGTGCCATTG+GGG	+	chr7.2:25997400-25997419	None:intergenic	55.0%
	CCTGAAGGTGGTCCCAGAGT+CGG	-	chr7.2:25996921-25996940	MS.gene033440:CDS	60.0%
	CTGAAGGTGGTCCCAGAGTC+GGG	-	chr7.2:25996922-25996941	MS.gene033440:CDS	60.0%
!!	CGACTCTGGGACCACCTTCA+GGG	+	chr7.2:25996923-25996942	None:intergenic	60.0%
!!	CCGACTCTGGGACCACCTTC+AGG	+	chr7.2:25996924-25996943	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.2	gene	25996777	25997421	25996777	ID=MS.gene033440
chr7.2	mRNA	25996777	25997421	25996777	ID=MS.gene033440.t1;Parent=MS.gene033440
chr7.2	exon	25996777	25997421	25996777	ID=MS.gene033440.t1.exon1;Parent=MS.gene033440.t1
chr7.2	CDS	25996777	25997421	25996777	ID=cds.MS.gene033440.t1;Parent=MS.gene033440.t1

Gene Sequence

>MS.gene033440

ATGATAGTTGTGGGGTCATACAAATACAATTATACCAATCCTTCGGTATATAGTTCAATTGACTTGGAGATTTTCTCATTGAGAGCTAATGAGTGGGAACAAATTGAGTTTGATTCTCATTTGCCTTATAGGAATATTGCAAGCCCTGAAGGTGGTCCCAGAGTCGGGTCATTCTTGAATGGTTCTATTCATTGGCTGGTTTATAATTATCAGACCAAAAGCGATGTTATTATTGCCTTTGATTTAAAGGAAATGACACTCTCAGAGATAGCTCTTCCAGATGATTTTAATAGTGGTCGCTCTCTTAGAATTTATGATTTGATGGTATTTGGCGGACTTATCAGTGTATGGATTGTGAAGAGTTCTAAAATTAAGATATGGGTGATGCAAGAATACGCAGTGCATTCATCTTGGACTAAGACTCTTGATTTTTCTTTTCATCCCGCTCCGGATTTTTCCCTAGTATGCTTTACAAATCGTGGTGATATTGTTGGACCAGTTGCTGATGGTGGATTAGCGAAGCTTAATGACAAAGGACAACTGCAAGAGTATCATTCCTATGGTGACCGTTACTTTATGAGATCCCAAATGGCGGTGTATACAGAGTCTCTGCTTTCACTCCCCAATGGCACTGGGCAAGCTTAA

Protein sequence

>MS.gene033440.t1

MIVVGSYKYNYTNPSVYSSIDLEIFSLRANEWEQIEFDSHLPYRNIASPEGGPRVGSFLNGSIHWLVYNYQTKSDVIIAFDLKEMTLSEIALPDDFNSGRSLRIYDLMVFGGLISVWIVKSSKIKIWVMQEYAVHSSWTKTLDFSFHPAPDFSLVCFTNRGDIVGPVADGGLAKLNDKGQLQEYHSYGDRYFMRSQMAVYTESLLSLPNGTGQA