AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene036583


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036583.t1 MTR_4g117750 90.503 358 33 1 1 357 1 358 0.0 627
MS.gene036583.t1 MTR_4g117750 48.438 128 54 3 241 356 354 481 6.43e-29 117
MS.gene036583.t1 MTR_1g055135 59.673 367 135 5 2 358 12 375 1.61e-142 409
MS.gene036583.t1 MTR_4g118370 81.124 249 23 2 107 355 33 257 2.58e-138 394
MS.gene036583.t1 MTR_5g097210 59.116 362 133 6 1 355 7 360 1.34e-137 396
MS.gene036583.t1 MTR_3g103020 56.000 375 134 10 1 358 18 378 4.05e-124 362
MS.gene036583.t1 MTR_3g034180 53.175 378 146 9 1 357 121 488 2.79e-122 361
MS.gene036583.t1 MTR_4g117850 56.044 364 138 10 3 354 23 376 3.56e-122 357
MS.gene036583.t1 MTR_3g034130 52.877 365 142 8 1 344 7 362 2.19e-118 347
MS.gene036583.t1 MTR_3g034160 52.646 378 148 9 1 357 7 374 6.04e-113 333
MS.gene036583.t1 MTR_5g070130 51.596 376 155 9 2 358 10 377 2.92e-112 332
MS.gene036583.t1 MTR_4g109270 51.337 374 147 10 3 358 8 364 8.88e-112 330
MS.gene036583.t1 MTR_5g070080 50.000 392 149 9 1 358 8 386 1.79e-111 330
MS.gene036583.t1 MTR_4g094365 50.938 373 154 9 1 358 6 364 5.80e-110 325
MS.gene036583.t1 MTR_5g070088 50.127 393 148 9 2 358 6 386 2.05e-109 325
MS.gene036583.t1 MTR_4g109280 53.005 366 148 10 3 358 8 359 7.50e-108 320
MS.gene036583.t1 MTR_4g023080 49.864 369 151 10 1 357 7 353 3.47e-103 308
MS.gene036583.t1 MTR_6g060650 51.316 380 147 11 2 357 7 372 7.12e-103 308
MS.gene036583.t1 MTR_1g055195 55.634 284 107 3 79 358 210 478 2.34e-102 310
MS.gene036583.t1 MTR_4g122850 49.862 363 154 11 14 358 12 364 2.57e-102 306
MS.gene036583.t1 MTR_4g021785 48.919 370 156 10 1 358 7 355 1.61e-100 301
MS.gene036583.t1 MTR_4g116330 50.529 378 147 15 2 358 22 380 2.14e-100 301
MS.gene036583.t1 MTR_4g117770 49.194 372 158 9 3 358 11 367 2.35e-98 296
MS.gene036583.t1 MTR_4g117810 49.194 372 158 9 3 358 11 367 2.35e-98 296
MS.gene036583.t1 MTR_4g023090 47.680 388 154 14 2 357 15 385 3.02e-98 296
MS.gene036583.t1 MTR_4g023070 47.906 382 161 13 1 357 1 369 3.76e-97 293
MS.gene036583.t1 MTR_4g117780 48.267 375 157 11 3 358 11 367 2.17e-96 291
MS.gene036583.t1 MTR_1g055165 47.283 368 125 9 2 358 9 318 1.62e-94 285
MS.gene036583.t1 MTR_4g118380 50.279 358 143 10 2 331 7 357 1.83e-93 283
MS.gene036583.t1 MTR_4g023120 46.875 384 164 13 1 358 1 370 2.39e-93 283
MS.gene036583.t1 MTR_4g117720 47.632 380 127 13 1 358 49 378 8.01e-93 282
MS.gene036583.t1 MTR_4g023130 46.556 363 131 9 1 357 7 312 8.19e-91 275
MS.gene036583.t1 MTR_4g023380 44.332 397 149 13 2 358 15 379 4.79e-87 268
MS.gene036583.t1 MTR_4g023190 48.108 370 154 14 3 356 10 357 3.50e-84 259
MS.gene036583.t1 MTR_4g023440 45.257 369 137 13 2 358 17 332 5.96e-84 258
MS.gene036583.t1 MTR_8g032390 46.703 364 152 15 1 353 38 370 1.42e-83 258
MS.gene036583.t1 MTR_4g023150 46.757 370 160 13 3 356 10 358 1.02e-82 256
MS.gene036583.t1 MTR_4g116330 45.213 376 131 15 2 358 22 341 8.61e-82 253
MS.gene036583.t1 MTR_8g433040 44.444 378 161 13 1 358 16 364 8.62e-82 253
MS.gene036583.t1 MTR_8g032380 44.444 378 161 13 1 358 16 364 8.62e-82 253
MS.gene036583.t1 MTR_4g023200 44.944 356 159 13 17 356 24 358 2.36e-80 249
MS.gene036583.t1 MTR_8g013010 51.273 275 103 7 1 261 52 309 4.44e-77 240
MS.gene036583.t1 MTR_8g433030 43.526 363 132 14 1 353 38 337 9.24e-72 227
MS.gene036583.t1 MTR_1g055250 59.113 203 69 6 133 332 51 242 5.67e-70 222
MS.gene036583.t1 MTR_4g121580 42.588 371 150 17 1 348 9 339 2.26e-65 212
MS.gene036583.t1 MTR_7g079370 42.274 343 168 9 32 352 16 350 2.88e-65 211
MS.gene036583.t1 MTR_4g117870 43.279 305 114 9 66 358 10 267 2.92e-65 208
MS.gene036583.t1 MTR_2g048580 37.432 366 192 10 1 358 6 342 4.48e-64 207
MS.gene036583.t1 MTR_1g055175 52.736 201 85 5 161 358 8 201 1.46e-61 196
MS.gene036583.t1 MTR_4g118400 43.158 285 116 9 78 352 46 294 1.74e-61 199
MS.gene036583.t1 MTR_8g102520 41.718 326 160 9 37 358 23 322 4.10e-61 199
MS.gene036583.t1 MTR_7g079400 41.853 313 153 9 65 358 35 337 3.32e-58 192
MS.gene036583.t1 MTR_4g116320 52.000 225 91 7 136 355 43 255 5.77e-58 189
MS.gene036583.t1 MTR_6g463430 45.327 214 103 5 147 358 1 202 7.29e-50 166
MS.gene036583.t1 MTR_8g040935 47.534 223 91 9 147 358 1 208 1.79e-48 162
MS.gene036583.t1 MTR_4g116340 45.378 238 86 9 2 220 35 247 1.59e-46 159
MS.gene036583.t1 MTR_4g117530 37.931 232 92 7 129 358 72 253 3.70e-38 137
MS.gene036583.t1 MTR_7g079420 37.037 297 134 9 76 358 887 1144 1.32e-37 144
MS.gene036583.t1 MTR_4g118360 54.128 109 48 1 252 358 18 126 1.86e-34 123
MS.gene036583.t1 MTR_2g021150 29.551 379 222 14 2 354 13 372 3.43e-34 129
MS.gene036583.t1 MTR_7g117720 43.655 197 75 9 2 183 9 184 3.76e-33 124
MS.gene036583.t1 MTR_7g117720 51.724 87 36 3 273 353 186 272 1.78e-15 76.3
MS.gene036583.t1 MTR_4g055060 33.438 320 152 16 3 289 30 321 1.31e-32 125
MS.gene036583.t1 MTR_4g117430 45.614 171 70 6 94 261 2 152 2.16e-32 119
MS.gene036583.t1 MTR_4g114700 34.182 275 110 10 88 349 2 218 3.23e-32 121
MS.gene036583.t1 MTR_5g069120 41.808 177 84 4 13 170 1 177 3.14e-30 114
MS.gene036583.t1 MTR_1g097490 29.268 369 213 14 3 350 49 390 3.87e-29 116
MS.gene036583.t1 MTR_5g022420 29.396 381 208 18 2 350 26 377 6.78e-28 112
MS.gene036583.t1 MTR_8g098830 40.476 168 90 4 162 327 35 194 1.29e-27 108
MS.gene036583.t1 MTR_2g055970 32.258 310 169 14 1 290 209 497 1.67e-27 113
MS.gene036583.t1 MTR_1g094210 28.367 349 199 12 2 327 56 376 4.40e-27 111
MS.gene036583.t1 MTR_5g023000 58.065 93 35 3 269 358 8 99 5.82e-27 102
MS.gene036583.t1 MTR_4g109290 46.405 153 50 5 3 148 9 136 1.04e-26 105
MS.gene036583.t1 MTR_3g007330 31.562 320 160 14 3 296 48 334 2.00e-26 108
MS.gene036583.t1 MTR_3g023930 28.871 381 191 15 3 350 34 367 2.18e-26 108
MS.gene036583.t1 MTR_1g094210 27.957 372 216 13 2 350 56 398 2.36e-26 108
MS.gene036583.t1 MTR_3g014570 31.190 311 178 14 3 295 29 321 2.55e-26 108
MS.gene036583.t1 MTR_1g068875 29.787 329 191 14 3 309 4 314 2.92e-26 108
MS.gene036583.t1 MTR_1g054725 28.125 384 212 18 3 350 20 375 4.29e-26 107
MS.gene036583.t1 MTR_6g027910 32.298 322 165 14 3 290 9 311 6.66e-26 107
MS.gene036583.t1 MTR_3g013740 30.061 326 174 14 3 295 44 348 1.28e-25 107
MS.gene036583.t1 MTR_8g467140 30.968 310 173 14 1 290 30 318 1.46e-25 105
MS.gene036583.t1 MTR_2g021190 28.940 349 207 13 3 333 21 346 2.20e-25 105
MS.gene036583.t1 MTR_5g057790 32.468 308 166 15 3 290 46 331 3.10e-25 105
MS.gene036583.t1 MTR_7g079450 44.444 144 70 3 216 358 3 137 3.25e-25 99.4
MS.gene036583.t1 MTR_4g122860 36.318 201 84 7 166 358 156 320 3.34e-25 104
MS.gene036583.t1 MTR_4g108820 30.000 300 160 11 2 296 41 295 3.82e-25 103
MS.gene036583.t1 MTR_3g014540 30.671 313 167 11 3 290 29 316 4.75e-25 105
MS.gene036583.t1 MTR_1g097330 30.225 311 178 12 3 296 16 304 1.06e-24 104
MS.gene036583.t1 MTR_1g068835 30.868 311 178 13 3 294 4 296 1.15e-24 103
MS.gene036583.t1 MTR_5g057690 30.068 296 179 10 3 290 46 321 1.25e-24 103
MS.gene036583.t1 MTR_5g057020 30.872 298 169 13 3 290 46 316 2.71e-24 102
MS.gene036583.t1 MTR_7g407070 31.847 314 171 14 3 285 32 333 2.87e-24 102
MS.gene036583.t1 MTR_1g058190 28.939 311 174 11 3 298 35 313 3.52e-24 102
MS.gene036583.t1 MTR_1g097560 28.221 326 187 14 3 310 36 332 3.91e-24 102
MS.gene036583.t1 MTR_4g061340 29.032 310 177 11 3 289 26 315 6.87e-24 101
MS.gene036583.t1 MTR_3g011060 30.149 335 170 14 3 300 28 335 7.05e-24 101
MS.gene036583.t1 MTR_0760s0010 29.967 307 166 10 11 298 55 331 1.01e-23 101
MS.gene036583.t1 MTR_3g083010 30.175 401 218 15 3 352 6 395 1.16e-23 101
MS.gene036583.t1 MTR_3g007360 29.443 377 207 17 6 351 55 403 1.48e-23 100
MS.gene036583.t1 MTR_2g078900 29.836 305 174 13 3 290 33 314 1.64e-23 100
MS.gene036583.t1 MTR_2g046830 27.974 311 181 12 2 292 24 311 2.25e-23 100
MS.gene036583.t1 MTR_3g083640 28.158 380 209 14 3 350 55 402 2.58e-23 100
MS.gene036583.t1 MTR_3g013770 30.599 317 166 11 3 290 33 324 2.62e-23 100
MS.gene036583.t1 MTR_3g036290 30.319 376 193 18 3 350 22 356 3.27e-23 99.4
MS.gene036583.t1 MTR_4g107820 27.812 320 184 12 3 301 36 329 4.14e-23 99.8
MS.gene036583.t1 MTR_4g107780 27.812 320 184 12 3 301 36 329 4.14e-23 99.8
MS.gene036583.t1 MTR_5g011200 31.111 315 165 13 3 290 17 306 4.77e-23 99.4
MS.gene036583.t1 MTR_3g010920 26.031 388 197 12 3 350 44 381 4.81e-23 99.4
MS.gene036583.t1 MTR_2g426070 30.061 326 169 13 4 289 7 313 5.10e-23 99.4
MS.gene036583.t1 MTR_6g034720 48.760 121 51 3 118 231 53 169 5.12e-23 95.9
MS.gene036583.t1 MTR_2g028160 27.966 354 199 11 3 313 5 345 5.61e-23 99.8
MS.gene036583.t1 MTR_4g107820 27.812 320 184 12 3 301 36 329 5.81e-23 99.4
MS.gene036583.t1 MTR_2g046900 28.754 313 186 14 2 293 27 323 6.54e-23 99.0
MS.gene036583.t1 MTR_4g107780 27.812 320 184 12 3 301 36 329 6.59e-23 99.4
MS.gene036583.t1 MTR_2g426020 29.250 400 214 18 3 355 6 383 9.76e-23 98.6
MS.gene036583.t1 MTR_2g021050 27.742 310 182 9 3 294 5 290 1.09e-22 98.2
MS.gene036583.t1 MTR_2g047832 30.606 330 170 17 2 293 28 336 1.35e-22 98.6
MS.gene036583.t1 MTR_3g030250 26.579 380 210 14 3 350 37 379 1.55e-22 97.8
MS.gene036583.t1 MTR_5g057710 30.844 308 171 15 3 290 46 331 1.56e-22 98.2
MS.gene036583.t1 MTR_3g036430 29.012 324 167 12 3 309 20 297 1.68e-22 97.1
MS.gene036583.t1 MTR_4g133170 26.888 331 197 13 3 309 4 313 1.82e-22 97.8
MS.gene036583.t1 MTR_2g021770 29.104 402 216 18 6 351 15 403 2.39e-22 97.4
MS.gene036583.t1 MTR_3g006670 27.864 323 174 12 3 295 49 342 2.53e-22 97.4
MS.gene036583.t1 MTR_4g023430 65.789 76 25 1 1 75 39 114 2.54e-22 94.4
MS.gene036583.t1 MTR_4g023430 45.122 82 40 2 282 358 141 222 1.29e-13 69.7
MS.gene036583.t1 MTR_1g055200 59.259 81 32 1 91 170 5 85 2.82e-22 90.5
MS.gene036583.t1 MTR_1g068860 28.617 311 187 11 3 294 4 298 3.14e-22 97.1
MS.gene036583.t1 MTR_2g031640 28.105 306 195 10 3 294 6 300 3.16e-22 97.1
MS.gene036583.t1 MTR_8g101580 28.723 376 214 20 3 350 45 394 3.55e-22 97.1
MS.gene036583.t1 MTR_6g086825 27.204 397 229 17 2 349 69 454 3.87e-22 97.4
MS.gene036583.t1 MTR_2g426060 29.912 341 195 14 3 309 6 336 4.61e-22 96.7
MS.gene036583.t1 MTR_2g028140 30.499 341 169 16 3 294 5 326 5.21e-22 96.7
MS.gene036583.t1 MTR_3g007410 28.800 375 212 16 6 351 55 403 6.62e-22 96.3
MS.gene036583.t1 MTR_2g028130 27.586 348 198 11 3 309 5 339 6.63e-22 96.3
MS.gene036583.t1 MTR_6g065980 29.932 294 168 12 3 285 16 282 6.66e-22 95.9
MS.gene036583.t1 MTR_1g056710 30.719 306 174 13 3 290 34 319 8.10e-22 95.9
MS.gene036583.t1 MTR_5g046300 27.124 306 170 11 3 285 4 279 8.59e-22 95.1
MS.gene036583.t1 MTR_5g046290 27.124 306 170 11 3 285 4 279 8.59e-22 95.1
MS.gene036583.t1 MTR_3g436150 32.372 312 166 14 3 285 32 327 1.16e-21 95.5
MS.gene036583.t1 MTR_3g036335 26.804 388 210 14 3 350 41 394 1.46e-21 95.1
MS.gene036583.t1 MTR_2g028110 29.843 382 222 14 3 357 4 366 1.56e-21 95.1
MS.gene036583.t1 MTR_3g011100 30.128 312 172 12 3 289 235 525 2.14e-21 95.9
MS.gene036583.t1 MTR_5g046260 27.063 303 144 11 3 285 4 249 2.27e-21 93.2
MS.gene036583.t1 MTR_0267s0050 28.045 353 185 16 6 309 9 341 2.37e-21 94.7
MS.gene036583.t1 MTR_3g010590 26.183 317 185 10 3 299 39 326 2.88e-21 94.4
MS.gene036583.t1 MTR_2g025420 29.060 351 195 13 3 309 6 346 3.15e-21 94.7
MS.gene036583.t1 MTR_2g426090 27.187 320 189 10 6 294 9 315 4.23e-21 94.0
MS.gene036583.t1 MTR_3g010520 29.032 310 155 13 3 290 25 291 4.40e-21 93.6
MS.gene036583.t1 MTR_8g464770 26.823 384 229 17 3 352 12 377 5.83e-21 93.2
MS.gene036583.t1 MTR_2g029990 26.902 368 231 13 4 350 52 402 7.90e-21 93.2
MS.gene036583.t1 MTR_2g425980 29.819 332 174 12 3 294 5 317 1.02e-20 92.8
MS.gene036583.t1 MTR_5g007610 31.153 321 162 19 3 289 41 336 1.20e-20 92.8
MS.gene036583.t1 MTR_3g010970 26.190 378 209 14 6 350 51 391 1.49e-20 92.4
MS.gene036583.t1 MTR_0044s0300 28.846 312 169 12 3 290 38 320 1.62e-20 92.0
MS.gene036583.t1 MTR_3g010870 27.129 317 165 12 3 290 37 316 1.94e-20 92.0
MS.gene036583.t1 MTR_2g046920 26.959 319 176 13 2 293 23 311 2.08e-20 91.7
MS.gene036583.t1 MTR_5g022040 26.273 373 175 17 3 291 40 396 2.11e-20 92.4
MS.gene036583.t1 MTR_5g059430 24.221 417 236 14 3 355 26 426 2.47e-20 92.0
MS.gene036583.t1 MTR_3g006570 27.303 304 187 10 3 290 21 306 2.52e-20 91.7
MS.gene036583.t1 MTR_6g053240 27.103 321 174 12 3 290 28 321 2.67e-20 91.7
MS.gene036583.t1 MTR_7g007300 29.430 316 156 12 3 290 103 379 3.10e-20 91.7
MS.gene036583.t1 MTR_0667s0010 28.030 396 224 18 3 355 6 383 3.26e-20 91.7
MS.gene036583.t1 MTR_5g069760 27.848 395 213 20 1 351 4 370 3.51e-20 90.9
MS.gene036583.t1 MTR_8g062660 27.796 313 171 11 2 283 21 309 3.81e-20 92.0
MS.gene036583.t1 MTR_1g055145 54.545 88 33 1 13 93 43 130 3.98e-20 89.4
MS.gene036583.t1 MTR_1g055145 53.659 82 29 2 196 276 129 202 1.07e-14 73.9
MS.gene036583.t1 MTR_3g437520 29.087 416 189 21 1 330 21 416 5.73e-20 91.3
MS.gene036583.t1 MTR_8g046310 27.851 377 216 15 11 354 24 377 5.77e-20 90.5
MS.gene036583.t1 MTR_4g070550 29.518 332 178 12 3 294 5 320 5.96e-20 90.5
MS.gene036583.t1 MTR_7g056390 27.962 422 211 19 2 351 17 417 7.01e-20 90.5
MS.gene036583.t1 MTR_3g030330 29.316 307 169 11 3 290 20 297 9.00e-20 89.7
MS.gene036583.t1 MTR_3g024040 27.778 306 174 12 11 299 39 314 9.16e-20 89.7
MS.gene036583.t1 MTR_3g006500 28.527 319 163 14 3 290 17 301 1.25e-19 89.4
MS.gene036583.t1 MTR_4g031770 28.333 300 190 10 3 290 4 290 1.31e-19 89.4
MS.gene036583.t1 MTR_1g050542 26.596 376 221 18 2 350 57 404 1.41e-19 89.7
MS.gene036583.t1 MTR_6g021880 29.043 303 181 10 14 294 31 321 3.01e-19 88.6
MS.gene036583.t1 MTR_2g104340 26.087 345 208 13 3 308 14 350 3.56e-19 88.2
MS.gene036583.t1 MTR_2g066200 25.641 390 232 14 3 351 12 384 4.75e-19 87.8
MS.gene036583.t1 MTR_1g114700 30.063 316 167 12 3 290 29 318 5.11e-19 87.8
MS.gene036583.t1 MTR_0464s0020 29.765 383 178 21 1 312 21 383 6.08e-19 87.8
MS.gene036583.t1 MTR_5g021860 26.146 371 182 13 3 298 30 383 7.22e-19 88.2
MS.gene036583.t1 MTR_2g031680 28.571 308 188 10 3 294 6 297 8.72e-19 87.0
MS.gene036583.t1 MTR_4g102410 24.747 396 243 14 2 351 60 446 9.14e-19 87.4
MS.gene036583.t1 MTR_5g021860 26.146 371 182 13 3 298 30 383 1.01e-18 87.4
MS.gene036583.t1 MTR_7g056820 25.203 369 216 15 2 329 6 355 1.08e-18 86.7
MS.gene036583.t1 MTR_6g053260 27.157 313 179 10 3 290 337 625 1.32e-18 87.8
MS.gene036583.t1 MTR_2g021210 30.565 301 173 13 3 290 84 361 1.34e-18 87.0
MS.gene036583.t1 MTR_3g007430 27.907 301 182 11 6 289 46 328 1.38e-18 86.7
MS.gene036583.t1 MTR_3g013950 26.667 360 192 16 1 309 5 343 1.41e-18 86.7
MS.gene036583.t1 MTR_1g053510 26.392 413 211 19 6 352 18 403 1.73e-18 86.3
MS.gene036583.t1 MTR_3g010430 28.037 321 165 13 3 290 36 323 1.73e-18 86.7
MS.gene036583.t1 MTR_0128s0020 30.091 329 161 17 1 287 16 317 1.85e-18 86.3
MS.gene036583.t1 MTR_4g037465 29.226 349 187 15 2 309 20 349 1.90e-18 86.3
MS.gene036583.t1 MTR_1g054575 28.261 322 174 15 3 299 52 341 2.15e-18 87.0
MS.gene036583.t1 MTR_2g024110 28.354 328 184 15 3 301 4 309 2.49e-18 85.5
MS.gene036583.t1 MTR_2g026010 27.974 311 195 10 3 295 4 303 2.54e-18 85.9
MS.gene036583.t1 MTR_3g010620 25.962 312 160 9 6 290 39 306 2.69e-18 85.9
MS.gene036583.t1 MTR_2g043400 27.962 422 207 19 1 350 21 417 2.77e-18 85.9
MS.gene036583.t1 MTR_2g078850 28.664 307 172 10 6 290 33 314 3.07e-18 85.5
MS.gene036583.t1 MTR_4g014370 25.060 415 225 15 3 351 11 405 3.09e-18 85.9
MS.gene036583.t1 MTR_3g030240 27.864 323 167 12 3 298 40 323 3.95e-18 85.1
MS.gene036583.t1 MTR_5g096630 24.694 409 232 15 3 351 18 410 4.95e-18 85.1
MS.gene036583.t1 MTR_8g467670 26.343 391 213 18 2 348 13 372 5.14e-18 85.1
MS.gene036583.t1 MTR_7g070440 27.083 384 215 17 2 346 6 363 5.72e-18 84.7
MS.gene036583.t1 MTR_7g056760 26.131 398 232 16 1 350 21 404 6.34e-18 84.7
MS.gene036583.t1 MTR_2g024100 29.808 312 179 11 11 294 16 315 7.12e-18 84.7
MS.gene036583.t1 MTR_5g037680 25.320 391 232 15 3 350 8 381 8.03e-18 84.7
MS.gene036583.t1 MTR_3g024150 28.947 304 173 13 6 290 38 317 8.44e-18 84.3
MS.gene036583.t1 MTR_1g115160 29.739 306 172 15 1 290 20 298 9.05e-18 84.0
MS.gene036583.t1 MTR_7g057270 28.746 327 175 15 3 287 26 336 1.28e-17 84.0
MS.gene036583.t1 MTR_7g056290 27.818 417 208 20 6 350 25 420 1.32e-17 84.0
MS.gene036583.t1 MTR_3g023940 24.922 321 175 11 3 290 34 321 1.35e-17 83.6
MS.gene036583.t1 MTR_8g039500 27.299 348 184 16 3 309 12 331 1.84e-17 82.8
MS.gene036583.t1 MTR_2g031720 26.284 331 209 10 2 309 5 323 2.16e-17 83.2
MS.gene036583.t1 MTR_2g021155 31.596 307 171 14 3 290 36 322 2.41e-17 84.0
MS.gene036583.t1 MTR_2g021155 29.557 203 113 11 99 290 704 887 7.81e-11 63.9
MS.gene036583.t1 MTR_3g010390 28.660 321 177 14 3 289 33 335 2.60e-17 82.8
MS.gene036583.t1 MTR_6g007135 26.115 314 198 9 2 294 25 325 2.71e-17 82.8
MS.gene036583.t1 MTR_7g061060 28.840 319 174 14 1 285 11 310 2.88e-17 82.8
MS.gene036583.t1 MTR_7g062100 26.142 394 224 17 3 350 24 396 2.90e-17 82.8
MS.gene036583.t1 MTR_3g007270 24.845 322 182 11 3 289 47 343 2.91e-17 82.8
MS.gene036583.t1 MTR_4g027370 25.201 373 187 13 3 300 30 385 3.00e-17 83.2
MS.gene036583.t1 MTR_4g030830 25.661 378 213 15 3 328 9 370 4.34e-17 82.0
MS.gene036583.t1 MTR_4g117550 24.485 388 219 14 3 351 17 369 4.48e-17 82.0
MS.gene036583.t1 MTR_7g069550 25.208 361 207 13 2 313 13 359 4.62e-17 82.0
MS.gene036583.t1 MTR_0129s0050 25.564 399 223 17 11 351 22 404 4.88e-17 82.0
MS.gene036583.t1 MTR_8g012090 27.300 337 174 15 6 308 19 318 5.26e-17 81.3
MS.gene036583.t1 MTR_4g080200 27.517 298 175 10 1 278 1 277 5.97e-17 81.3
MS.gene036583.t1 MTR_8g013005 57.627 59 25 0 300 358 1 59 6.05e-17 74.7
MS.gene036583.t1 MTR_2g021252 27.907 301 172 10 6 290 50 321 7.97e-17 81.3
MS.gene036583.t1 MTR_4g024890 26.183 317 181 10 2 285 9 305 9.74e-17 81.3
MS.gene036583.t1 MTR_1g055070 28.750 320 154 13 3 291 49 325 1.16e-16 80.9
MS.gene036583.t1 MTR_0115s0020 26.398 322 202 13 3 292 10 328 1.43e-16 80.9
MS.gene036583.t1 MTR_5g057643 32.759 232 128 10 3 217 46 266 1.52e-16 79.0
MS.gene036583.t1 MTR_7g445890 24.352 386 239 13 1 350 14 382 2.05e-16 80.1
MS.gene036583.t1 MTR_5g008530 77.083 48 11 0 3 50 18 65 2.14e-16 73.6
MS.gene036583.t1 MTR_2g065860 26.462 325 184 14 1 285 10 319 2.35e-16 80.1
MS.gene036583.t1 MTR_6g080680 23.500 400 226 13 3 350 19 390 2.64e-16 79.7
MS.gene036583.t1 MTR_6g013270 27.586 319 190 13 2 298 28 327 3.13e-16 79.7
MS.gene036583.t1 MTR_5g069930 25.212 353 198 16 1 309 4 334 3.77e-16 79.3
MS.gene036583.t1 MTR_7g066840 26.006 323 184 10 1 287 21 324 3.99e-16 79.3
MS.gene036583.t1 MTR_7g013590 27.832 309 189 10 6 296 39 331 5.11e-16 79.0
MS.gene036583.t1 MTR_8g073550 30.851 188 112 4 2 174 29 213 5.88e-16 76.6
MS.gene036583.t1 MTR_3g030350 28.387 310 163 12 3 285 35 312 6.32e-16 78.6
MS.gene036583.t1 MTR_3g011120 27.397 365 183 18 2 317 13 344 6.59e-16 78.6
MS.gene036583.t1 MTR_4g013180 26.016 369 230 14 1 331 9 372 8.57e-16 78.6
MS.gene036583.t1 MTR_1g007430 26.923 338 179 16 14 308 7 319 8.68e-16 77.8
MS.gene036583.t1 MTR_4g129190 26.601 406 220 18 3 351 6 390 9.17e-16 78.2
MS.gene036583.t1 MTR_7g056003 29.321 324 166 14 6 287 18 320 9.57e-16 78.2
MS.gene036583.t1 MTR_6g065510 25.459 381 184 14 1 351 21 331 9.61e-16 77.8
MS.gene036583.t1 MTR_0054s0090 22.738 409 243 13 2 355 16 406 1.22e-15 77.8
MS.gene036583.t1 MTR_5g072060 26.012 346 201 14 3 313 6 331 1.86e-15 78.2
MS.gene036583.t1 MTR_7g066100 26.471 408 223 19 1 352 9 395 2.26e-15 77.0
MS.gene036583.t1 MTR_3g058470 26.269 335 175 12 3 309 37 327 2.38e-15 77.0
MS.gene036583.t1 MTR_6g004660 27.184 309 187 11 2 285 15 310 2.48e-15 77.0
MS.gene036583.t1 MTR_6g055210 28.571 336 178 15 2 294 21 337 3.62e-15 76.6
MS.gene036583.t1 MTR_6g004210 27.410 332 186 14 14 304 36 353 3.63e-15 76.6
MS.gene036583.t1 MTR_7g056260 26.332 319 186 11 1 287 12 313 3.74e-15 75.9
MS.gene036583.t1 MTR_0064s0160 27.019 322 187 13 3 285 42 354 4.73e-15 76.3
MS.gene036583.t1 MTR_1g088120 26.911 327 188 12 1 287 8 323 4.75e-15 76.3
MS.gene036583.t1 MTR_7g016930 27.157 313 178 14 2 286 15 305 4.85e-15 75.5
MS.gene036583.t1 MTR_8g046200 26.506 415 219 16 11 355 24 422 5.08e-15 76.3
MS.gene036583.t1 MTR_8g064890 28.278 389 215 21 2 348 15 381 5.29e-15 75.9
MS.gene036583.t1 MTR_2g022000 26.776 366 197 15 3 308 16 370 5.43e-15 76.3
MS.gene036583.t1 MTR_3g024110 26.537 309 189 10 3 297 101 385 6.05e-15 76.3
MS.gene036583.t1 MTR_6g090180 24.439 401 240 13 2 351 46 434 7.03e-15 75.9
MS.gene036583.t1 MTR_0097s0030 25.558 403 211 17 3 357 14 375 7.11e-15 75.5
MS.gene036583.t1 MTR_2g047240 25.558 403 211 17 3 357 14 375 7.11e-15 75.5
MS.gene036583.t1 MTR_2g066170 27.429 350 188 17 3 308 12 339 7.87e-15 75.5
MS.gene036583.t1 MTR_0128s0070 28.834 326 164 17 3 287 22 320 1.15e-14 75.1
MS.gene036583.t1 MTR_0054s0100 23.245 413 238 16 2 355 16 408 1.16e-14 75.1
MS.gene036583.t1 MTR_7g017130 27.410 332 179 14 3 289 18 332 1.17e-14 75.1
MS.gene036583.t1 MTR_7g017170 27.410 332 179 14 3 289 18 332 1.29e-14 75.1
MS.gene036583.t1 MTR_5g097680 26.437 348 180 14 11 289 25 365 1.29e-14 75.1
MS.gene036583.t1 MTR_5g056020 26.627 338 181 15 2 285 16 340 1.35e-14 75.1
MS.gene036583.t1 MTR_2g034700 26.149 348 183 17 2 308 13 327 1.50e-14 74.3
MS.gene036583.t1 MTR_1g112930 27.508 309 175 13 3 290 25 305 2.22e-14 73.9
MS.gene036583.t1 MTR_2g025960 27.897 233 131 9 103 313 26 243 2.36e-14 73.2
MS.gene036583.t1 MTR_6g048120 25.558 403 214 17 3 350 36 407 2.83e-14 73.9
MS.gene036583.t1 MTR_2g038680 23.415 410 235 13 3 351 16 407 2.86e-14 73.9
MS.gene036583.t1 MTR_7g061050 27.160 324 170 12 1 285 11 307 3.00e-14 73.6
MS.gene036583.t1 MTR_5g027330 23.562 365 216 15 7 336 44 380 3.15e-14 73.9
MS.gene036583.t1 MTR_1g007450 27.066 351 204 16 3 311 12 352 3.67e-14 73.6
MS.gene036583.t1 MTR_5g027370 23.913 368 211 14 7 336 33 369 3.81e-14 73.6
MS.gene036583.t1 MTR_7g079640 24.934 381 214 18 3 342 13 362 4.91e-14 73.2
MS.gene036583.t1 MTR_1g115185 27.184 309 186 13 2 290 38 327 4.94e-14 73.2
MS.gene036583.t1 MTR_2g021950 26.781 351 192 16 6 308 19 352 6.16e-14 72.8
MS.gene036583.t1 MTR_7g091630 26.606 327 185 13 1 287 30 341 6.20e-14 72.8
MS.gene036583.t1 MTR_3g009240 29.000 300 173 13 3 285 36 312 6.33e-14 72.8
MS.gene036583.t1 MTR_7g028660 27.914 326 178 12 1 289 9 314 6.60e-14 72.8
MS.gene036583.t1 MTR_5g057040 32.143 196 110 8 3 181 46 235 6.68e-14 73.6
MS.gene036583.t1 MTR_7g067680 26.837 313 159 12 3 290 49 316 6.71e-14 72.8
MS.gene036583.t1 MTR_8g033110 25.120 418 226 19 2 351 13 411 7.11e-14 72.8
MS.gene036583.t1 MTR_7g078860 27.164 335 170 13 2 287 8 317 7.40e-14 72.4
MS.gene036583.t1 MTR_5g023570 37.838 111 58 3 2 107 36 140 8.75e-14 68.6
MS.gene036583.t1 MTR_4g013185 25.444 338 189 9 2 287 9 335 1.04e-13 72.4
MS.gene036583.t1 MTR_3g030310 24.451 319 182 9 3 290 21 311 1.07e-13 72.0
MS.gene036583.t1 MTR_4g030090 27.070 314 186 12 3 285 14 315 1.07e-13 72.0
MS.gene036583.t1 MTR_7g050520 27.003 337 172 15 1 296 20 323 1.17e-13 72.0
MS.gene036583.t1 MTR_7g017040 24.010 404 239 16 2 356 15 399 1.24e-13 72.0
MS.gene036583.t1 MTR_1g055375 26.963 382 220 18 6 350 7 366 1.29e-13 71.6
MS.gene036583.t1 MTR_7g050480 27.246 334 175 14 1 296 20 323 1.30e-13 71.6
MS.gene036583.t1 MTR_0831s0010 27.374 358 179 19 2 309 49 375 1.36e-13 72.0
MS.gene036583.t1 MTR_7g056710 27.848 316 171 13 2 285 17 307 1.60e-13 71.6
MS.gene036583.t1 MTR_7g066000 25.641 312 199 11 1 285 23 328 2.06e-13 71.2
MS.gene036583.t1 MTR_2g461450 26.048 334 203 12 1 309 16 330 2.23e-13 70.9
MS.gene036583.t1 MTR_7g055870 25.500 400 211 19 3 325 13 402 2.71e-13 70.9
MS.gene036583.t1 MTR_0242s0060 26.946 334 179 14 1 287 7 322 2.96e-13 70.9
MS.gene036583.t1 MTR_0242s0040 26.946 334 179 14 1 287 7 322 2.96e-13 70.9
MS.gene036583.t1 MTR_1g442850 26.708 322 174 13 2 285 4 301 3.02e-13 70.5
MS.gene036583.t1 MTR_4g130330 26.647 334 185 17 2 289 6 325 3.11e-13 70.5
MS.gene036583.t1 MTR_2g047200 23.698 384 208 14 1 328 18 372 3.26e-13 70.5
MS.gene036583.t1 MTR_4g055820 25.148 338 189 14 3 289 14 338 3.64e-13 70.1
MS.gene036583.t1 MTR_7g055987 27.515 338 178 16 6 304 23 332 3.66e-13 70.5
MS.gene036583.t1 MTR_3g058440 26.866 268 147 10 3 238 35 285 3.73e-13 69.7
MS.gene036583.t1 MTR_5g097220 23.990 421 213 17 6 351 16 404 4.52e-13 70.1
MS.gene036583.t1 MTR_1g007410 26.724 348 179 15 3 297 22 346 4.55e-13 70.1
MS.gene036583.t1 MTR_3g007300 27.640 322 150 14 3 300 49 311 4.98e-13 69.7
MS.gene036583.t1 MTR_4g006270 25.000 304 178 11 3 289 4 274 5.77e-13 69.7
MS.gene036583.t1 MTR_7g060940 27.887 355 167 17 1 300 20 340 6.54e-13 69.7
MS.gene036583.t1 MTR_6g017280 24.302 358 202 15 1 309 7 344 7.39e-13 69.3
MS.gene036583.t1 MTR_5g048160 26.019 319 197 14 3 285 4 319 1.02e-12 68.9
MS.gene036583.t1 MTR_6g478230 22.525 404 229 13 2 349 26 401 1.09e-12 68.9
MS.gene036583.t1 MTR_4g011660 24.570 407 240 11 3 350 19 417 1.17e-12 68.9
MS.gene036583.t1 MTR_7g062060 25.917 409 225 19 2 351 11 400 1.53e-12 68.6
MS.gene036583.t1 MTR_7g056200 24.038 416 195 14 1 350 21 381 1.69e-12 68.6
MS.gene036583.t1 MTR_7g060960 27.778 306 163 12 1 287 30 296 2.25e-12 67.8
MS.gene036583.t1 MTR_4g019990 26.254 339 182 13 2 294 5 321 2.50e-12 67.8
MS.gene036583.t1 MTR_2g078870 26.515 264 155 13 39 290 1 237 2.78e-12 67.0
MS.gene036583.t1 MTR_7g056797 31.970 269 138 16 1 233 21 280 2.80e-12 67.8
MS.gene036583.t1 MTR_1g061330 24.868 378 244 14 3 358 4 363 3.24e-12 67.4
MS.gene036583.t1 MTR_3g083660 29.545 176 98 6 115 290 62 211 3.56e-12 66.6
MS.gene036583.t1 MTR_7g022600 27.463 335 176 15 3 285 23 342 4.83e-12 67.0
MS.gene036583.t1 MTR_2g047892 25.231 325 180 13 1 285 20 321 5.28e-12 67.0
MS.gene036583.t1 MTR_3g009260 28.013 307 164 14 3 285 41 314 5.36e-12 67.0
MS.gene036583.t1 MTR_4g030790 32.941 170 89 6 3 170 19 165 5.79e-12 66.6
MS.gene036583.t1 MTR_7g056737 26.769 325 166 13 1 285 20 312 7.46e-12 66.6
MS.gene036583.t1 MTR_3g006530 25.767 326 186 14 3 299 40 338 1.19e-11 65.9
MS.gene036583.t1 MTR_6g027890 28.302 212 115 7 108 297 73 269 1.35e-11 65.1
MS.gene036583.t1 MTR_7g056503 23.797 395 238 16 2 350 20 397 2.14e-11 65.1
MS.gene036583.t1 MTR_8g041270 24.507 355 210 13 3 308 15 360 2.21e-11 65.1
MS.gene036583.t1 MTR_0134s0060 24.573 293 159 12 2 238 11 297 2.23e-11 65.1
MS.gene036583.t1 MTR_8g063330 24.702 336 187 13 1 289 12 328 2.65e-11 65.1
MS.gene036583.t1 MTR_4g030760 28.108 185 115 5 3 173 73 253 2.96e-11 64.7
MS.gene036583.t1 MTR_6g017270 28.358 201 111 9 1 174 7 201 3.19e-11 64.3
MS.gene036583.t1 MTR_1g055065 28.505 214 124 8 92 290 20 219 3.39e-11 63.5
MS.gene036583.t1 MTR_7g052670 24.396 414 241 17 1 350 19 424 3.57e-11 64.7
MS.gene036583.t1 MTR_8g013000 25.562 356 198 13 3 308 10 348 3.68e-11 64.3
MS.gene036583.t1 MTR_2g065840 26.888 331 174 16 1 285 10 318 4.03e-11 64.3
MS.gene036583.t1 MTR_0129s0070 23.650 389 238 14 6 352 20 391 4.43e-11 64.3
MS.gene036583.t1 MTR_5g086590 26.697 221 136 10 100 309 8 213 4.58e-11 62.8
MS.gene036583.t1 MTR_3g010870 28.139 231 109 10 3 205 37 238 4.88e-11 63.5
MS.gene036583.t1 MTR_8g063370 25.970 335 187 15 11 308 32 342 5.04e-11 63.9
MS.gene036583.t1 MTR_7g077970 26.361 349 184 14 3 298 7 335 5.26e-11 63.9
MS.gene036583.t1 MTR_4g030110 24.629 337 168 13 2 294 29 323 5.35e-11 63.9
MS.gene036583.t1 MTR_7g035295 25.537 419 190 20 1 350 14 379 5.67e-11 63.9
MS.gene036583.t1 MTR_4g013175 26.496 351 171 13 1 287 8 335 6.24e-11 63.9
MS.gene036583.t1 MTR_7g056170 35.878 131 63 5 1 113 73 200 9.52e-11 63.2
MS.gene036583.t1 MTR_2g064960 59.524 42 17 0 317 358 18 59 9.83e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036583.t1 AT3G06240 29.630 378 186 16 1 321 34 388 7.50e-26 107
MS.gene036583.t1 AT4G12560 27.811 338 199 14 3 309 4 327 3.90e-23 100
MS.gene036583.t1 AT4G12560 27.811 338 199 14 3 309 4 327 3.90e-23 100
MS.gene036583.t1 AT4G12560 27.811 338 199 14 3 309 4 327 3.90e-23 100
MS.gene036583.t1 AT3G23880 29.299 314 179 12 1 290 8 302 4.35e-23 99.4
MS.gene036583.t1 AT4G22390 23.469 392 241 14 4 358 5 374 5.38e-20 90.9
MS.gene036583.t1 AT4G22390 23.274 391 243 13 4 358 5 374 5.63e-20 90.9
MS.gene036583.t1 AT1G47790 24.579 297 180 8 3 281 25 295 1.97e-18 86.3
MS.gene036583.t1 AT5G49610 30.218 321 185 14 2 303 8 308 3.86e-18 85.1
MS.gene036583.t1 AT3G52320 26.498 317 189 12 3 298 27 320 1.21e-17 84.0
MS.gene036583.t1 AT3G10240 25.000 296 182 9 3 283 27 297 9.13e-15 75.5
MS.gene036583.t1 AT2G40920 25.490 306 194 12 8 289 59 354 1.41e-14 75.1
MS.gene036583.t1 AT2G40925 24.590 305 189 11 3 283 27 314 1.65e-14 74.7
MS.gene036583.t1 AT2G40920 25.658 304 190 13 11 289 3 295 1.70e-14 74.3
MS.gene036583.t1 AT1G30790 23.659 317 199 11 3 291 9 310 2.52e-14 73.9
MS.gene036583.t1 AT5G07610 26.172 256 156 9 6 242 36 277 7.62e-14 72.8
MS.gene036583.t1 AT3G49450 24.437 311 191 12 3 290 35 324 1.17e-13 72.0
MS.gene036583.t1 AT3G08750 27.600 250 133 13 3 231 12 234 2.11e-13 71.2
MS.gene036583.t1 AT5G15660 24.390 328 207 11 3 309 28 335 4.76e-13 70.5
MS.gene036583.t1 AT1G32420 23.810 294 170 10 3 276 37 296 7.34e-13 68.9
MS.gene036583.t1 AT2G40910 23.602 322 186 12 3 289 62 358 7.64e-13 69.7
MS.gene036583.t1 AT1G11620 25.258 388 230 18 1 356 4 363 9.08e-13 68.9
MS.gene036583.t1 AT2G40910 23.602 322 186 12 3 289 69 365 1.06e-12 69.3
MS.gene036583.t1 AT2G16220 32.402 179 98 6 2 160 5 180 1.39e-12 68.9
MS.gene036583.t1 AT4G19940 23.469 294 197 5 3 272 35 324 3.72e-12 67.4
MS.gene036583.t1 AT1G50870 27.647 170 113 1 1 160 29 198 4.33e-12 67.4
MS.gene036583.t1 AT1G33530 26.756 299 176 15 3 286 97 367 1.37e-11 65.9
MS.gene036583.t1 AT4G21240 33.750 160 88 6 2 148 35 189 1.77e-11 65.5
MS.gene036583.t1 AT3G47150 30.857 175 92 7 1 153 10 177 3.12e-11 64.3
MS.gene036583.t1 AT1G48060 27.103 214 143 5 3 207 26 235 3.53e-11 63.2
MS.gene036583.t1 AT1G47765 25.391 256 146 7 3 239 26 255 4.31e-11 64.3
MS.gene036583.t1 AT1G47340 29.787 188 99 6 3 160 6 190 4.57e-11 64.3
MS.gene036583.t1 AT1G47340 29.787 188 99 6 3 160 6 190 4.57e-11 64.3
MS.gene036583.t1 AT5G62510 23.676 321 178 13 3 288 44 332 5.04e-11 63.9
MS.gene036583.t1 AT3G10430 26.738 187 111 6 3 173 5 181 5.97e-11 63.5
MS.gene036583.t1 AT1G47340 29.787 188 99 6 3 160 37 221 6.11e-11 63.9
MS.gene036583.t1 AT5G50220 23.642 313 196 12 3 312 33 305 7.72e-11 63.2

Find 97 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTAATGATCGTGATTTA+TGG 0.152161 8.3:-8467943 MS.gene036583:CDS
TATTTAAATTTCTCCGGTTT+TGG 0.173697 8.3:-8468301 MS.gene036583:CDS
TTTCTCAGTCTATGGGTTTC+GGG 0.238313 8.3:-8467908 MS.gene036583:CDS
TTAGAGGATTTCTCAGTCTA+TGG 0.277856 8.3:-8467916 MS.gene036583:CDS
ATTTCTCAGTCTATGGGTTT+CGG 0.288923 8.3:-8467909 MS.gene036583:CDS
TATTGTTGCCTTTCATTTAA+CGG 0.314412 8.3:-8468032 MS.gene036583:CDS
TTAATATTAAGATCTGAATA+AGG 0.321863 8.3:+8468430 None:intergenic
CGTGATTTATGGGTATTTAG+AGG 0.332628 8.3:-8467932 MS.gene036583:CDS
TAAGCTTGCTCACTGTCGTT+GGG 0.334902 8.3:+8467626 None:intergenic
CCGGTAACCTTAGGAGGATT+AGG 0.336772 8.3:+8468653 None:intergenic
GAACAGAATTCTACTATTGT+TGG 0.351648 8.3:+8468531 None:intergenic
TTAAGATCTGAATAAGGTTC+TGG 0.353650 8.3:+8468436 None:intergenic
AGATGATTACTTGGTGGTTT+CGG 0.354705 8.3:-8468263 MS.gene036583:CDS
ACTCTGTATATAAAGTCATT+TGG 0.364554 8.3:+8467663 None:intergenic
TCTTCAATGGGGCTATTCAT+TGG 0.367117 8.3:-8468087 MS.gene036583:CDS
TTCTAATGATCGTGATTTAT+GGG 0.378767 8.3:-8467942 MS.gene036583:CDS
AAATTTAAATAATAATCATT+AGG 0.380093 8.3:+8468313 None:intergenic
CCTAATCCTCCTAAGGTTAC+CGG 0.382048 8.3:-8468653 MS.gene036583:CDS
CTCTGTATATAAAGTCATTT+GGG 0.389511 8.3:+8467664 None:intergenic
GAAACGATCTTACTACAATA+AGG 0.390275 8.3:+8468136 None:intergenic
GGGATCATAAGGTTGATATA+TGG 0.402180 8.3:-8467886 MS.gene036583:CDS
TGGTAGACTCGTTCTTCAAT+GGG 0.404948 8.3:-8468099 MS.gene036583:CDS
GAATGATTGTGAATATCATC+TGG 0.404983 8.3:+8467983 None:intergenic
CAATGGGGCTATTCATTGGT+TGG 0.407106 8.3:-8468083 MS.gene036583:CDS
TCAAATGTGTTTGCAAGTCT+TGG 0.414463 8.3:-8468612 MS.gene036583:CDS
GGCAATATTGTTGCATCAAA+TGG 0.423457 8.3:-8467764 MS.gene036583:CDS
GTCTACCATGGGATAATTAG+AGG 0.424200 8.3:+8468114 None:intergenic
GATTATTATTTAAATTTCTC+CGG 0.427925 8.3:-8468307 MS.gene036583:CDS
ATGGTAGACTCGTTCTTCAA+TGG 0.434124 8.3:-8468100 MS.gene036583:CDS
AATACGGAGTGCATTCATCT+TGG 0.435954 8.3:-8467853 MS.gene036583:CDS
GATAGCATGTCATCTGAGTT+TGG 0.438668 8.3:+8468223 None:intergenic
TGCCTTTCATTTAACGGAAA+GGG 0.441092 8.3:-8468026 MS.gene036583:CDS
GCAGAACGAAATTCAGAAGT+TGG 0.449879 8.3:+8468502 None:intergenic
TTCCCTTTCCGTTAAATGAA+AGG 0.471307 8.3:+8468024 None:intergenic
AGGTAGGGAAAGGCATCAAT+AGG 0.471622 8.3:+8467812 None:intergenic
TTAAGCTTGCTCACTGTCGT+TGG 0.483184 8.3:+8467625 None:intergenic
CTCCTATGATGAAGATGCAC+CGG 0.484608 8.3:-8467690 MS.gene036583:CDS
TCCCGGTGCATCTTCATCAT+AGG 0.487825 8.3:+8467688 None:intergenic
AGGTATTTGTTTCTGAGCTC+CGG 0.488475 8.3:+8468342 None:intergenic
TGTTTCTGAGCTCCGGTGGA+TGG 0.488540 8.3:+8468349 None:intergenic
TAGAGGATTTCTCAGTCTAT+GGG 0.489737 8.3:-8467915 MS.gene036583:CDS
GAGACTTCACCGGTAACCTT+AGG 0.495190 8.3:+8468644 None:intergenic
GTTGCATCAAATGGCTGGAT+TGG 0.500275 8.3:-8467755 MS.gene036583:CDS
TTCTCAGTCTATGGGTTTCG+GGG 0.502147 8.3:-8467907 MS.gene036583:CDS
ATATTGTTGCATCAAATGGC+TGG 0.504005 8.3:-8467760 MS.gene036583:CDS
TTGTACAACATATGGGGTAA+AGG 0.508316 8.3:+8467792 None:intergenic
GGATCATAAGGTTGATATAT+GGG 0.512097 8.3:-8467885 MS.gene036583:CDS
TGATGGATCATACCCAAAAC+CGG 0.512479 8.3:+8468288 None:intergenic
TCCATCAGAAGATGATTACT+TGG 0.513528 8.3:-8468272 MS.gene036583:CDS
TTGCCTTTCATTTAACGGAA+AGG 0.513682 8.3:-8468027 MS.gene036583:CDS
ACAACATATGGGGTAAAGGT+AGG 0.522986 8.3:+8467796 None:intergenic
ATCAGAAGATGATTACTTGG+TGG 0.524504 8.3:-8468269 MS.gene036583:CDS
AATGATTGTGAATATCATCT+GGG 0.525401 8.3:+8467984 None:intergenic
TATAAAGTCATTTGGGATCC+CGG 0.527463 8.3:+8467671 None:intergenic
GTGCTTCAAACATCTACCTA+TGG 0.527518 8.3:-8468375 MS.gene036583:CDS
TTTAAATAATAATCATTAGG+AGG 0.528009 8.3:+8468316 None:intergenic
AATTCTACTATTGTTGGTTG+AGG 0.529866 8.3:+8468537 None:intergenic
CTTACTACAATAAGGCCAAT+GGG 0.531902 8.3:+8468144 None:intergenic
AATATTAAAGCTTCATCTAG+AGG 0.534399 8.3:-8468415 MS.gene036583:CDS
TGGTGAAATATAATGACAAA+GGG 0.538505 8.3:-8467730 MS.gene036583:CDS
TAAGGTTGATATATGGGTGA+TGG 0.538737 8.3:-8467879 MS.gene036583:CDS
TCTTACTACAATAAGGCCAA+TGG 0.544456 8.3:+8468143 None:intergenic
CAACATATGGGGTAAAGGTA+GGG 0.546060 8.3:+8467797 None:intergenic
AGATGACATGCTATCCCACT+TGG 0.548523 8.3:-8468215 MS.gene036583:CDS
ACCAAGTAATCATCTTCTGA+TGG 0.551354 8.3:+8468271 None:intergenic
ATATGGGTGATGGAAGAATA+CGG 0.552348 8.3:-8467869 MS.gene036583:CDS
TAATAATCATTAGGAGGCAA+AGG 0.552914 8.3:+8468322 None:intergenic
TGATCATCCTAATCCTCCTA+AGG 0.554801 8.3:-8468660 MS.gene036583:CDS
CTGGTGAAATATAATGACAA+AGG 0.556915 8.3:-8467731 MS.gene036583:CDS
AATTCATGAGGCAGAAACAT+TGG 0.561693 8.3:+8468682 None:intergenic
ACTTCACCGGTAACCTTAGG+AGG 0.561996 8.3:+8468647 None:intergenic
ATTGAAAGCTAATGTGTGGA+AGG 0.563079 8.3:-8468182 MS.gene036583:CDS
TCTACTATTGTTGGTTGAGG+CGG 0.568346 8.3:+8468540 None:intergenic
AAACTGTGGGTACTTCCCAT+TGG 0.574875 8.3:-8468159 MS.gene036583:CDS
CGTTTCCTCTAATTATCCCA+TGG 0.582692 8.3:-8468119 MS.gene036583:CDS
AAGCTTGCTCACTGTCGTTG+GGG 0.593934 8.3:+8467627 None:intergenic
TACCTATGGAATCCATCCAC+CGG 0.596523 8.3:-8468361 MS.gene036583:CDS
TCTCATTGAAAGCTAATGTG+TGG 0.611447 8.3:-8468186 MS.gene036583:CDS
ATCAAATGGCTGGATTGGAC+TGG 0.613044 8.3:-8467750 MS.gene036583:CDS
ATTGAAGAACGAGTCTACCA+TGG 0.613149 8.3:+8468102 None:intergenic
TCCTATGATGAAGATGCACC+GGG 0.613499 8.3:-8467689 MS.gene036583:CDS
TATTTGTTTCTGAGCTCCGG+TGG 0.615695 8.3:+8468345 None:intergenic
CAATGAGAAAATCTCCAAGT+GGG 0.620165 8.3:+8468201 None:intergenic
AAGCGAATAAGAGACTTCAC+CGG 0.636731 8.3:+8468634 None:intergenic
TCTCAGTCTATGGGTTTCGG+GGG 0.637073 8.3:-8467906 MS.gene036583:CDS
TTGAAGAACGAGTCTACCAT+GGG 0.641041 8.3:+8468103 None:intergenic
CTCCGGTGGATGGATTCCAT+AGG 0.643424 8.3:+8468359 None:intergenic
ATGATTGTGAATATCATCTG+GGG 0.658414 8.3:+8467985 None:intergenic
TATGGGGTAAAGGTAGGGAA+AGG 0.660628 8.3:+8467802 None:intergenic
ATTAGGATGATCAATTCATG+AGG 0.664573 8.3:+8468670 None:intergenic
TCAATGAGAAAATCTCCAAG+TGG 0.676277 8.3:+8468200 None:intergenic
GGTGAAATATAATGACAAAG+GGG 0.680228 8.3:-8467729 MS.gene036583:CDS
AAATGCGAATTTGCAAAGTG+AGG 0.687100 8.3:+8468571 None:intergenic
TGATTGTGAATATCATCTGG+GGG 0.697005 8.3:+8467986 None:intergenic
GGTAGACTCGTTCTTCAATG+GGG 0.697881 8.3:-8468098 MS.gene036583:CDS
TAATGTGTGGAAGGAAACTG+TGG 0.704564 8.3:-8468173 MS.gene036583:CDS
AATGTGTGGAAGGAAACTGT+GGG 0.814934 8.3:-8468172 MS.gene036583:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATTATTATTTAAATTTCTC+CGG - chr8.3:8467997-8468016 MS.gene036583:CDS 15.0%
!! TTAATATTAAGATCTGAATA+AGG + chr8.3:8467877-8467896 None:intergenic 15.0%
!! TTTAAATAATAATCATTAGG+AGG + chr8.3:8467991-8468010 None:intergenic 15.0%
! AATATTAAAGCTTCATCTAG+AGG - chr8.3:8467889-8467908 MS.gene036583:CDS 25.0%
! AATGATTGTGAATATCATCT+GGG + chr8.3:8468323-8468342 None:intergenic 25.0%
! ACTCTGTATATAAAGTCATT+TGG + chr8.3:8468644-8468663 None:intergenic 25.0%
! ATTCTAATGATCGTGATTTA+TGG - chr8.3:8468361-8468380 MS.gene036583:CDS 25.0%
! CTCTGTATATAAAGTCATTT+GGG + chr8.3:8468643-8468662 None:intergenic 25.0%
! TATTGTTGCCTTTCATTTAA+CGG - chr8.3:8468272-8468291 MS.gene036583:CDS 25.0%
! TGGTGAAATATAATGACAAA+GGG - chr8.3:8468574-8468593 MS.gene036583:CDS 25.0%
! TTCTAATGATCGTGATTTAT+GGG - chr8.3:8468362-8468381 MS.gene036583:CDS 25.0%
!! ATTTAAATTTCTCCGGTTTT+GGG - chr8.3:8468004-8468023 MS.gene036583:CDS 25.0%
!! TATTTAAATTTCTCCGGTTT+TGG - chr8.3:8468003-8468022 MS.gene036583:CDS 25.0%
ATGATTGTGAATATCATCTG+GGG + chr8.3:8468322-8468341 None:intergenic 30.0%
ATTAGGATGATCAATTCATG+AGG + chr8.3:8467637-8467656 None:intergenic 30.0%
CTGGTGAAATATAATGACAA+AGG - chr8.3:8468573-8468592 MS.gene036583:CDS 30.0%
GAAACGATCTTACTACAATA+AGG + chr8.3:8468171-8468190 None:intergenic 30.0%
GAACAGAATTCTACTATTGT+TGG + chr8.3:8467776-8467795 None:intergenic 30.0%
GAATGATTGTGAATATCATC+TGG + chr8.3:8468324-8468343 None:intergenic 30.0%
GGTGAAATATAATGACAAAG+GGG - chr8.3:8468575-8468594 MS.gene036583:CDS 30.0%
TAATAATCATTAGGAGGCAA+AGG + chr8.3:8467985-8468004 None:intergenic 30.0%
TTAAGATCTGAATAAGGTTC+TGG + chr8.3:8467871-8467890 None:intergenic 30.0%
! AATTCTACTATTGTTGGTTG+AGG + chr8.3:8467770-8467789 None:intergenic 30.0%
!! CACTTTTTGTACAACATATG+GGG + chr8.3:8468521-8468540 None:intergenic 30.0%
!! GGATCATAAGGTTGATATAT+GGG - chr8.3:8468419-8468438 MS.gene036583:CDS 30.0%
!!! CCACTTTTTGTACAACATAT+GGG + chr8.3:8468522-8468541 None:intergenic 30.0%
AAATGCGAATTTGCAAAGTG+AGG + chr8.3:8467736-8467755 None:intergenic 35.0%
ACCAAGTAATCATCTTCTGA+TGG + chr8.3:8468036-8468055 None:intergenic 35.0%
ATATTGTTGCATCAAATGGC+TGG - chr8.3:8468544-8468563 MS.gene036583:CDS 35.0%
ATCAGAAGATGATTACTTGG+TGG - chr8.3:8468035-8468054 MS.gene036583:CDS 35.0%
ATTGAAAGCTAATGTGTGGA+AGG - chr8.3:8468122-8468141 MS.gene036583:CDS 35.0%
ATTTCTCAGTCTATGGGTTT+CGG - chr8.3:8468395-8468414 MS.gene036583:CDS 35.0%
CAATGAGAAAATCTCCAAGT+GGG + chr8.3:8468106-8468125 None:intergenic 35.0%
CCCATATGTTGTACAAAAAG+TGG - chr8.3:8468519-8468538 MS.gene036583:CDS 35.0%
CGTGATTTATGGGTATTTAG+AGG - chr8.3:8468372-8468391 MS.gene036583:CDS 35.0%
CTTACTACAATAAGGCCAAT+GGG + chr8.3:8468163-8468182 None:intergenic 35.0%
GGCAATATTGTTGCATCAAA+TGG - chr8.3:8468540-8468559 MS.gene036583:CDS 35.0%
TAGAGGATTTCTCAGTCTAT+GGG - chr8.3:8468389-8468408 MS.gene036583:CDS 35.0%
TCAAATGTGTTTGCAAGTCT+TGG - chr8.3:8467692-8467711 MS.gene036583:CDS 35.0%
TCAATGAGAAAATCTCCAAG+TGG + chr8.3:8468107-8468126 None:intergenic 35.0%
TCCATCAGAAGATGATTACT+TGG - chr8.3:8468032-8468051 MS.gene036583:CDS 35.0%
TCTCATTGAAAGCTAATGTG+TGG - chr8.3:8468118-8468137 MS.gene036583:CDS 35.0%
TCTTACTACAATAAGGCCAA+TGG + chr8.3:8468164-8468183 None:intergenic 35.0%
TGATTGTGAATATCATCTGG+GGG + chr8.3:8468321-8468340 None:intergenic 35.0%
TGCCTTTCATTTAACGGAAA+GGG - chr8.3:8468278-8468297 MS.gene036583:CDS 35.0%
TTAGAGGATTTCTCAGTCTA+TGG - chr8.3:8468388-8468407 MS.gene036583:CDS 35.0%
TTCCCTTTCCGTTAAATGAA+AGG + chr8.3:8468283-8468302 None:intergenic 35.0%
TTGCCTTTCATTTAACGGAA+AGG - chr8.3:8468277-8468296 MS.gene036583:CDS 35.0%
TTGTACAACATATGGGGTAA+AGG + chr8.3:8468515-8468534 None:intergenic 35.0%
! AGATGATTACTTGGTGGTTT+CGG - chr8.3:8468041-8468060 MS.gene036583:CDS 35.0%
! TATAAAGTCATTTGGGATCC+CGG + chr8.3:8468636-8468655 None:intergenic 35.0%
!! ATATGGGTGATGGAAGAATA+CGG - chr8.3:8468435-8468454 MS.gene036583:CDS 35.0%
!! GGGATCATAAGGTTGATATA+TGG - chr8.3:8468418-8468437 MS.gene036583:CDS 35.0%
!! TAAGGTTGATATATGGGTGA+TGG - chr8.3:8468425-8468444 MS.gene036583:CDS 35.0%
!!! GCCACTTTTTGTACAACATA+TGG + chr8.3:8468523-8468542 None:intergenic 35.0%
AAGCGAATAAGAGACTTCAC+CGG + chr8.3:8467673-8467692 None:intergenic 40.0%
AATACGGAGTGCATTCATCT+TGG - chr8.3:8468451-8468470 MS.gene036583:CDS 40.0%
AATGTGTGGAAGGAAACTGT+GGG - chr8.3:8468132-8468151 MS.gene036583:CDS 40.0%
ACAACATATGGGGTAAAGGT+AGG + chr8.3:8468511-8468530 None:intergenic 40.0%
ATGGTAGACTCGTTCTTCAA+TGG - chr8.3:8468204-8468223 MS.gene036583:CDS 40.0%
ATTGAAGAACGAGTCTACCA+TGG + chr8.3:8468205-8468224 None:intergenic 40.0%
CAACATATGGGGTAAAGGTA+GGG + chr8.3:8468510-8468529 None:intergenic 40.0%
CGTTTCCTCTAATTATCCCA+TGG - chr8.3:8468185-8468204 MS.gene036583:CDS 40.0%
GATAGCATGTCATCTGAGTT+TGG + chr8.3:8468084-8468103 None:intergenic 40.0%
GCAGAACGAAATTCAGAAGT+TGG + chr8.3:8467805-8467824 None:intergenic 40.0%
GTCTACCATGGGATAATTAG+AGG + chr8.3:8468193-8468212 None:intergenic 40.0%
GTGCTTCAAACATCTACCTA+TGG - chr8.3:8467929-8467948 MS.gene036583:CDS 40.0%
TAATGTGTGGAAGGAAACTG+TGG - chr8.3:8468131-8468150 MS.gene036583:CDS 40.0%
TCTTCAATGGGGCTATTCAT+TGG - chr8.3:8468217-8468236 MS.gene036583:CDS 40.0%
TGATCATCCTAATCCTCCTA+AGG - chr8.3:8467644-8467663 MS.gene036583:CDS 40.0%
TGGTAGACTCGTTCTTCAAT+GGG - chr8.3:8468205-8468224 MS.gene036583:CDS 40.0%
TTGAAGAACGAGTCTACCAT+GGG + chr8.3:8468204-8468223 None:intergenic 40.0%
TTTCTCAGTCTATGGGTTTC+GGG - chr8.3:8468396-8468415 MS.gene036583:CDS 40.0%
! TCTACTATTGTTGGTTGAGG+CGG + chr8.3:8467767-8467786 None:intergenic 40.0%
! TGATGGATCATACCCAAAAC+CGG + chr8.3:8468019-8468038 None:intergenic 40.0%
!! AGGTATTTGTTTCTGAGCTC+CGG + chr8.3:8467965-8467984 None:intergenic 40.0%
AAACTGTGGGTACTTCCCAT+TGG - chr8.3:8468145-8468164 MS.gene036583:CDS 45.0%
AGATGACATGCTATCCCACT+TGG - chr8.3:8468089-8468108 MS.gene036583:CDS 45.0%
CAATGGGGCTATTCATTGGT+TGG - chr8.3:8468221-8468240 MS.gene036583:CDS 45.0%
CCTAATCCTCCTAAGGTTAC+CGG - chr8.3:8467651-8467670 MS.gene036583:CDS 45.0%
CTCCTATGATGAAGATGCAC+CGG - chr8.3:8468614-8468633 MS.gene036583:CDS 45.0%
GGTAGACTCGTTCTTCAATG+GGG - chr8.3:8468206-8468225 MS.gene036583:CDS 45.0%
GTTGCATCAAATGGCTGGAT+TGG - chr8.3:8468549-8468568 MS.gene036583:CDS 45.0%
TACCTATGGAATCCATCCAC+CGG - chr8.3:8467943-8467962 MS.gene036583:CDS 45.0%
TATGGGGTAAAGGTAGGGAA+AGG + chr8.3:8468505-8468524 None:intergenic 45.0%
TCCTATGATGAAGATGCACC+GGG - chr8.3:8468615-8468634 MS.gene036583:CDS 45.0%
TTCTCAGTCTATGGGTTTCG+GGG - chr8.3:8468397-8468416 MS.gene036583:CDS 45.0%
TTGTGAATATCATCTGGGGG+AGG + chr8.3:8468318-8468337 None:intergenic 45.0%
! ATCAAATGGCTGGATTGGAC+TGG - chr8.3:8468554-8468573 MS.gene036583:CDS 45.0%
! TAAGCTTGCTCACTGTCGTT+GGG + chr8.3:8468681-8468700 None:intergenic 45.0%
! TTAAGCTTGCTCACTGTCGT+TGG + chr8.3:8468682-8468701 None:intergenic 45.0%
!! AGGTAGGGAAAGGCATCAAT+AGG + chr8.3:8468495-8468514 None:intergenic 45.0%
!! TATTTGTTTCTGAGCTCCGG+TGG + chr8.3:8467962-8467981 None:intergenic 45.0%
!! AAATTTAAATAATAATCATT+AGG + chr8.3:8467994-8468013 None:intergenic 5.0%
ACTTCACCGGTAACCTTAGG+AGG + chr8.3:8467660-8467679 None:intergenic 50.0%
ATGGGTTTCGGGGGATCATA+AGG - chr8.3:8468407-8468426 MS.gene036583:CDS 50.0%
CCGGTAACCTTAGGAGGATT+AGG + chr8.3:8467654-8467673 None:intergenic 50.0%
GAGACTTCACCGGTAACCTT+AGG + chr8.3:8467663-8467682 None:intergenic 50.0%
TCCCGGTGCATCTTCATCAT+AGG + chr8.3:8468619-8468638 None:intergenic 50.0%
TCTCAGTCTATGGGTTTCGG+GGG - chr8.3:8468398-8468417 MS.gene036583:CDS 50.0%
! AAGCTTGCTCACTGTCGTTG+GGG + chr8.3:8468680-8468699 None:intergenic 50.0%
! CTCCGGTGGATGGATTCCAT+AGG + chr8.3:8467948-8467967 None:intergenic 55.0%
! TGTTTCTGAGCTCCGGTGGA+TGG + chr8.3:8467958-8467977 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 8467625 8468701 8467625 ID=MS.gene036583
chr8.3 mRNA 8467625 8468701 8467625 ID=MS.gene036583.t1;Parent=MS.gene036583
chr8.3 exon 8467625 8468701 8467625 ID=MS.gene036583.t1.exon1;Parent=MS.gene036583.t1
chr8.3 CDS 8467625 8468701 8467625 ID=cds.MS.gene036583.t1;Parent=MS.gene036583.t1
Gene Sequence

>MS.gene036583

ATGTTTCTGCCTCATGAATTGATCATCCTAATCCTCCTAAGGTTACCGGTGAAGTCTCTTATTCGCTTCAAATGTGTTTGCAAGTCTTGGTTTTCTCTCATCTCTCATCCTCACTTTGCAAATTCGCATTTTCAACTTACCGCCTCAACCAACAATAGTAGAATTCTGTTCAAAACACCAACTTCTGAATTTCGTTCTGCAAATTTAGAAGCATCACTTCAAGATGATTCTGCTTTTATACTTCCAGAACCTTATTCAGATCTTAATATTAAAGCTTCATCTAGAGGCTTTATTGTTTTCTACTGTGCTTCAAACATCTACCTATGGAATCCATCCACCGGAGCTCAGAAACAAATACCTTTGCCTCCTAATGATTATTATTTAAATTTCTCCGGTTTTGGGTATGATCCATCAGAAGATGATTACTTGGTGGTTTCGGTATCGTATGATAGTATTCCAAACTCAGATGACATGCTATCCCACTTGGAGATTTTCTCATTGAAAGCTAATGTGTGGAAGGAAACTGTGGGTACTTCCCATTGGCCTTATTGTAGTAAGATCGTTTCCTCTAATTATCCCATGGTAGACTCGTTCTTCAATGGGGCTATTCATTGGTTGGCTTTTCGTCATGATATATGTGTTTATGTTATTGTTGCCTTTCATTTAACGGAAAGGGAACTTCTATTGATACCTCCCCCAGATGATATTCACAATCATTCTAATGATATTCACAATCATTCTAATGATCGTGATTTATGGGTATTTAGAGGATTTCTCAGTCTATGGGTTTCGGGGGATCATAAGGTTGATATATGGGTGATGGAAGAATACGGAGTGCATTCATCTTGGATTAAAACTCTTGTTCTTCCTATTGATGCCTTTCCCTACCTTTACCCCATATGTTGTACAAAAAGTGGCAATATTGTTGCATCAAATGGCTGGATTGGACTGGTGAAATATAATGACAAAGGGGAGTTTCTAGAGCATAACTCCTATGATGAAGATGCACCGGGATCCCAAATGACTTTATATACAGAGTCTCTGCTTTCACTCCCCAACGACAGTGAGCAAGCTTAA

Protein sequence

>MS.gene036583.t1

MFLPHELIILILLRLPVKSLIRFKCVCKSWFSLISHPHFANSHFQLTASTNNSRILFKTPTSEFRSANLEASLQDDSAFILPEPYSDLNIKASSRGFIVFYCASNIYLWNPSTGAQKQIPLPPNDYYLNFSGFGYDPSEDDYLVVSVSYDSIPNSDDMLSHLEIFSLKANVWKETVGTSHWPYCSKIVSSNYPMVDSFFNGAIHWLAFRHDICVYVIVAFHLTERELLLIPPPDDIHNHSNDIHNHSNDRDLWVFRGFLSLWVSGDHKVDIWVMEEYGVHSSWIKTLVLPIDAFPYLYPICCTKSGNIVASNGWIGLVKYNDKGEFLEHNSYDEDAPGSQMTLYTESLLSLPNDSEQA