Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58321.t1 | AET02110.2 | 70.6 | 252 | 60 | 2 | 148 | 396 | 124 | 364 | 8.30E-95 | 357.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58321.t1 | Q9LIR8 | 27.5 | 182 | 124 | 5 | 148 | 329 | 129 | 302 | 8.3e-11 | 69.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58321.t1 | G7LCP3 | 70.6 | 252 | 60 | 2 | 148 | 396 | 124 | 364 | 6.0e-95 | 357.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58321.t1 | MTR_8g433040 | 70.635 | 252 | 60 | 2 | 148 | 396 | 124 | 364 | 5.02e-119 | 350 |
MS.gene58321.t1 | MTR_8g032380 | 70.635 | 252 | 60 | 2 | 148 | 396 | 124 | 364 | 5.02e-119 | 350 |
MS.gene58321.t1 | MTR_8g032390 | 71.545 | 246 | 68 | 2 | 148 | 391 | 125 | 370 | 2.38e-116 | 343 |
MS.gene58321.t1 | MTR_8g433030 | 60.066 | 303 | 93 | 7 | 117 | 391 | 35 | 337 | 5.16e-105 | 313 |
MS.gene58321.t1 | MTR_4g094365 | 57.037 | 270 | 107 | 5 | 132 | 396 | 99 | 364 | 3.43e-92 | 281 |
MS.gene58321.t1 | MTR_4g122850 | 59.375 | 256 | 95 | 7 | 148 | 396 | 111 | 364 | 1.05e-89 | 276 |
MS.gene58321.t1 | MTR_6g060650 | 57.371 | 251 | 101 | 4 | 148 | 395 | 125 | 372 | 5.25e-86 | 266 |
MS.gene58321.t1 | MTR_4g117720 | 49.254 | 335 | 111 | 8 | 118 | 395 | 45 | 377 | 1.49e-85 | 265 |
MS.gene58321.t1 | MTR_3g103020 | 55.906 | 254 | 102 | 5 | 148 | 395 | 128 | 377 | 1.34e-82 | 257 |
MS.gene58321.t1 | MTR_4g023130 | 47.095 | 327 | 113 | 11 | 114 | 395 | 1 | 312 | 3.20e-76 | 239 |
MS.gene58321.t1 | MTR_4g118380 | 58.261 | 230 | 83 | 4 | 150 | 369 | 129 | 355 | 2.00e-74 | 236 |
MS.gene58321.t1 | MTR_4g109270 | 52.874 | 261 | 110 | 7 | 141 | 396 | 112 | 364 | 2.17e-73 | 233 |
MS.gene58321.t1 | MTR_3g034180 | 52.453 | 265 | 102 | 9 | 148 | 396 | 233 | 489 | 2.24e-72 | 234 |
MS.gene58321.t1 | MTR_4g021785 | 53.200 | 250 | 103 | 6 | 148 | 395 | 117 | 354 | 4.25e-72 | 229 |
MS.gene58321.t1 | MTR_4g023080 | 51.984 | 252 | 102 | 8 | 148 | 395 | 117 | 353 | 7.34e-71 | 226 |
MS.gene58321.t1 | MTR_4g116330 | 50.988 | 253 | 112 | 6 | 148 | 395 | 134 | 379 | 2.23e-69 | 223 |
MS.gene58321.t1 | MTR_4g117850 | 52.124 | 259 | 104 | 8 | 145 | 392 | 126 | 375 | 2.17e-68 | 221 |
MS.gene58321.t1 | MTR_4g109280 | 54.510 | 255 | 101 | 8 | 149 | 396 | 113 | 359 | 1.27e-67 | 218 |
MS.gene58321.t1 | MTR_3g034160 | 53.257 | 261 | 104 | 7 | 148 | 395 | 119 | 374 | 1.45e-67 | 219 |
MS.gene58321.t1 | MTR_4g023090 | 48.872 | 266 | 115 | 8 | 148 | 396 | 125 | 386 | 2.64e-67 | 218 |
MS.gene58321.t1 | MTR_4g023070 | 50.189 | 265 | 109 | 9 | 148 | 395 | 111 | 369 | 7.44e-67 | 217 |
MS.gene58321.t1 | MTR_4g023190 | 50.575 | 261 | 108 | 9 | 141 | 394 | 111 | 357 | 9.06e-66 | 213 |
MS.gene58321.t1 | MTR_3g034130 | 50.800 | 250 | 105 | 8 | 132 | 368 | 102 | 346 | 7.73e-65 | 211 |
MS.gene58321.t1 | MTR_4g023120 | 48.120 | 266 | 115 | 8 | 148 | 396 | 111 | 370 | 1.32e-64 | 211 |
MS.gene58321.t1 | MTR_5g097210 | 51.373 | 255 | 100 | 8 | 149 | 392 | 118 | 359 | 2.43e-64 | 210 |
MS.gene58321.t1 | MTR_5g070080 | 48.175 | 274 | 126 | 10 | 132 | 396 | 120 | 386 | 1.40e-63 | 209 |
MS.gene58321.t1 | MTR_4g023380 | 47.273 | 275 | 97 | 8 | 149 | 396 | 126 | 379 | 1.91e-63 | 208 |
MS.gene58321.t1 | MTR_4g023200 | 47.893 | 261 | 116 | 9 | 141 | 394 | 111 | 358 | 1.53e-62 | 205 |
MS.gene58321.t1 | MTR_4g023150 | 48.077 | 260 | 117 | 8 | 141 | 394 | 111 | 358 | 1.03e-61 | 203 |
MS.gene58321.t1 | MTR_1g055135 | 49.042 | 261 | 112 | 8 | 148 | 395 | 122 | 374 | 6.55e-60 | 199 |
MS.gene58321.t1 | MTR_4g117780 | 50.000 | 258 | 112 | 9 | 148 | 396 | 118 | 367 | 2.54e-59 | 197 |
MS.gene58321.t1 | MTR_4g117870 | 44.444 | 252 | 99 | 5 | 147 | 396 | 55 | 267 | 2.34e-58 | 191 |
MS.gene58321.t1 | MTR_4g118400 | 49.187 | 246 | 88 | 7 | 148 | 389 | 81 | 293 | 2.78e-58 | 192 |
MS.gene58321.t1 | MTR_4g118370 | 47.018 | 285 | 108 | 12 | 120 | 392 | 3 | 256 | 3.27e-58 | 191 |
MS.gene58321.t1 | MTR_5g070130 | 46.154 | 260 | 125 | 7 | 149 | 396 | 121 | 377 | 8.60e-58 | 194 |
MS.gene58321.t1 | MTR_4g121580 | 47.410 | 251 | 98 | 6 | 141 | 386 | 118 | 339 | 1.31e-57 | 193 |
MS.gene58321.t1 | MTR_4g117770 | 50.575 | 261 | 106 | 11 | 148 | 396 | 118 | 367 | 2.09e-57 | 192 |
MS.gene58321.t1 | MTR_4g117810 | 50.575 | 261 | 106 | 11 | 148 | 396 | 118 | 367 | 2.09e-57 | 192 |
MS.gene58321.t1 | MTR_1g055195 | 47.925 | 265 | 86 | 12 | 148 | 389 | 236 | 471 | 3.33e-57 | 194 |
MS.gene58321.t1 | MTR_6g463430 | 53.140 | 207 | 86 | 6 | 196 | 396 | 1 | 202 | 1.08e-55 | 182 |
MS.gene58321.t1 | MTR_8g040935 | 51.442 | 208 | 94 | 4 | 196 | 396 | 1 | 208 | 1.36e-54 | 179 |
MS.gene58321.t1 | MTR_4g116320 | 51.402 | 214 | 96 | 4 | 185 | 392 | 43 | 254 | 5.71e-54 | 179 |
MS.gene58321.t1 | MTR_5g070088 | 43.969 | 257 | 132 | 8 | 148 | 396 | 134 | 386 | 1.74e-52 | 179 |
MS.gene58321.t1 | MTR_8g102520 | 43.077 | 260 | 130 | 9 | 147 | 396 | 71 | 322 | 6.17e-52 | 176 |
MS.gene58321.t1 | MTR_1g055175 | 52.308 | 195 | 84 | 5 | 208 | 395 | 8 | 200 | 6.81e-51 | 170 |
MS.gene58321.t1 | MTR_7g079400 | 42.748 | 262 | 128 | 8 | 149 | 396 | 84 | 337 | 2.81e-50 | 172 |
MS.gene58321.t1 | MTR_4g117750 | 44.170 | 283 | 126 | 11 | 132 | 395 | 89 | 358 | 1.39e-49 | 174 |
MS.gene58321.t1 | MTR_4g117750 | 52.336 | 107 | 48 | 2 | 289 | 392 | 373 | 479 | 2.71e-23 | 101 |
MS.gene58321.t1 | MTR_1g055250 | 41.026 | 273 | 120 | 7 | 116 | 382 | 15 | 252 | 2.76e-49 | 169 |
MS.gene58321.t1 | MTR_4g117530 | 40.647 | 278 | 115 | 7 | 121 | 395 | 22 | 252 | 3.87e-49 | 167 |
MS.gene58321.t1 | MTR_4g023440 | 44.800 | 250 | 92 | 7 | 148 | 396 | 128 | 332 | 4.42e-49 | 169 |
MS.gene58321.t1 | MTR_4g116330 | 41.897 | 253 | 96 | 6 | 148 | 395 | 134 | 340 | 4.02e-46 | 162 |
MS.gene58321.t1 | MTR_1g055165 | 41.791 | 268 | 99 | 7 | 132 | 395 | 103 | 317 | 4.29e-46 | 161 |
MS.gene58321.t1 | MTR_7g079370 | 42.857 | 259 | 127 | 8 | 148 | 389 | 95 | 349 | 1.13e-45 | 161 |
MS.gene58321.t1 | MTR_8g013010 | 55.629 | 151 | 62 | 2 | 148 | 298 | 164 | 309 | 5.46e-45 | 158 |
MS.gene58321.t1 | MTR_4g117430 | 54.000 | 150 | 58 | 4 | 149 | 298 | 14 | 152 | 4.28e-41 | 142 |
MS.gene58321.t1 | MTR_4g114700 | 37.109 | 256 | 100 | 8 | 150 | 394 | 21 | 226 | 6.61e-34 | 126 |
MS.gene58321.t1 | MTR_7g079420 | 37.165 | 261 | 116 | 12 | 141 | 389 | 913 | 1137 | 9.90e-33 | 130 |
MS.gene58321.t1 | MTR_4g116340 | 52.500 | 120 | 53 | 2 | 148 | 264 | 129 | 247 | 8.51e-32 | 121 |
MS.gene58321.t1 | MTR_4g118360 | 52.344 | 128 | 52 | 4 | 274 | 395 | 1 | 125 | 5.95e-29 | 109 |
MS.gene58321.t1 | MTR_8g098830 | 40.678 | 177 | 94 | 6 | 204 | 374 | 30 | 201 | 1.16e-28 | 112 |
MS.gene58321.t1 | MTR_4g122860 | 32.792 | 308 | 154 | 11 | 102 | 396 | 53 | 320 | 5.59e-28 | 113 |
MS.gene58321.t1 | MTR_6g034720 | 52.101 | 119 | 53 | 3 | 161 | 276 | 53 | 170 | 2.09e-27 | 108 |
MS.gene58321.t1 | MTR_2g048580 | 34.749 | 259 | 123 | 13 | 149 | 395 | 117 | 341 | 6.99e-26 | 107 |
MS.gene58321.t1 | MTR_5g023000 | 55.556 | 99 | 41 | 2 | 301 | 396 | 1 | 99 | 6.27e-25 | 98.2 |
MS.gene58321.t1 | MTR_7g117720 | 56.180 | 89 | 38 | 1 | 148 | 235 | 102 | 190 | 1.08e-23 | 99.8 |
MS.gene58321.t1 | MTR_7g117720 | 50.588 | 85 | 35 | 3 | 312 | 389 | 186 | 270 | 1.09e-12 | 68.2 |
MS.gene58321.t1 | MTR_7g079450 | 42.069 | 145 | 68 | 5 | 258 | 395 | 1 | 136 | 5.24e-23 | 94.0 |
MS.gene58321.t1 | MTR_4g133170 | 27.803 | 223 | 142 | 9 | 141 | 349 | 96 | 313 | 5.18e-18 | 85.5 |
MS.gene58321.t1 | MTR_1g068875 | 28.708 | 209 | 132 | 9 | 132 | 328 | 87 | 290 | 3.10e-17 | 82.8 |
MS.gene58321.t1 | MTR_1g068835 | 27.982 | 218 | 136 | 8 | 152 | 358 | 108 | 315 | 1.36e-15 | 78.2 |
MS.gene58321.t1 | MTR_6g021880 | 28.968 | 252 | 159 | 11 | 148 | 388 | 139 | 381 | 4.45e-15 | 76.6 |
MS.gene58321.t1 | MTR_5g097680 | 24.815 | 270 | 171 | 8 | 151 | 391 | 159 | 425 | 6.19e-15 | 76.3 |
MS.gene58321.t1 | MTR_6g090180 | 29.493 | 217 | 120 | 8 | 140 | 328 | 162 | 373 | 2.25e-14 | 74.7 |
MS.gene58321.t1 | MTR_2g025960 | 27.273 | 231 | 150 | 8 | 149 | 365 | 29 | 255 | 3.66e-14 | 73.2 |
MS.gene58321.t1 | MTR_2g024100 | 27.753 | 227 | 135 | 8 | 151 | 359 | 122 | 337 | 4.78e-14 | 73.6 |
MS.gene58321.t1 | MTR_0129s0050 | 24.823 | 282 | 169 | 7 | 148 | 391 | 130 | 406 | 7.66e-14 | 72.8 |
MS.gene58321.t1 | MTR_1g068860 | 28.378 | 222 | 132 | 9 | 152 | 358 | 108 | 317 | 9.08e-14 | 72.4 |
MS.gene58321.t1 | MTR_2g028160 | 24.723 | 271 | 169 | 10 | 144 | 387 | 125 | 387 | 1.29e-13 | 72.4 |
MS.gene58321.t1 | MTR_5g011200 | 32.195 | 205 | 119 | 12 | 133 | 329 | 114 | 306 | 1.67e-13 | 71.6 |
MS.gene58321.t1 | MTR_3g007360 | 26.038 | 265 | 167 | 10 | 138 | 389 | 155 | 403 | 1.82e-13 | 71.6 |
MS.gene58321.t1 | MTR_2g024110 | 28.947 | 190 | 107 | 8 | 152 | 324 | 111 | 289 | 2.60e-13 | 71.2 |
MS.gene58321.t1 | MTR_1g097560 | 26.316 | 247 | 157 | 11 | 148 | 388 | 146 | 373 | 1.23e-12 | 68.9 |
MS.gene58321.t1 | MTR_7g079640 | 31.579 | 209 | 116 | 9 | 151 | 348 | 136 | 328 | 1.58e-12 | 68.9 |
MS.gene58321.t1 | MTR_7g077910 | 25.589 | 297 | 158 | 11 | 74 | 340 | 1 | 264 | 1.91e-12 | 68.2 |
MS.gene58321.t1 | MTR_8g101580 | 26.042 | 192 | 131 | 5 | 141 | 329 | 148 | 331 | 2.66e-12 | 68.2 |
MS.gene58321.t1 | MTR_2g028130 | 24.895 | 237 | 147 | 9 | 149 | 365 | 130 | 355 | 2.92e-12 | 68.2 |
MS.gene58321.t1 | MTR_1g094210 | 25.571 | 219 | 137 | 7 | 149 | 360 | 170 | 369 | 3.15e-12 | 68.2 |
MS.gene58321.t1 | MTR_3g030320 | 27.957 | 186 | 121 | 5 | 151 | 335 | 62 | 235 | 3.22e-12 | 67.0 |
MS.gene58321.t1 | MTR_2g078870 | 29.255 | 188 | 112 | 9 | 151 | 336 | 78 | 246 | 3.63e-12 | 67.0 |
MS.gene58321.t1 | MTR_1g094210 | 25.346 | 217 | 136 | 7 | 151 | 360 | 172 | 369 | 5.04e-12 | 67.4 |
MS.gene58321.t1 | MTR_5g069390 | 25.188 | 266 | 167 | 7 | 148 | 391 | 160 | 415 | 7.53e-12 | 67.0 |
MS.gene58321.t1 | MTR_2g022000 | 24.046 | 262 | 169 | 7 | 151 | 385 | 149 | 407 | 9.13e-12 | 66.6 |
MS.gene58321.t1 | MTR_5g097350 | 25.896 | 251 | 159 | 10 | 151 | 389 | 148 | 383 | 1.02e-11 | 66.2 |
MS.gene58321.t1 | MTR_8g464770 | 28.877 | 187 | 117 | 6 | 151 | 328 | 136 | 315 | 1.28e-11 | 65.9 |
MS.gene58321.t1 | MTR_2g026010 | 27.320 | 194 | 120 | 7 | 152 | 328 | 108 | 297 | 2.25e-11 | 65.5 |
MS.gene58321.t1 | MTR_2g021155 | 27.823 | 248 | 136 | 13 | 122 | 341 | 671 | 903 | 2.49e-11 | 65.9 |
MS.gene58321.t1 | MTR_4g023430 | 40.171 | 117 | 56 | 4 | 292 | 396 | 108 | 222 | 4.31e-11 | 62.8 |
MS.gene58321.t1 | MTR_6g017305 | 28.342 | 187 | 121 | 7 | 152 | 328 | 18 | 201 | 4.37e-11 | 63.5 |
MS.gene58321.t1 | MTR_3g013740 | 29.534 | 193 | 110 | 8 | 149 | 329 | 165 | 343 | 5.73e-11 | 64.3 |
MS.gene58321.t1 | MTR_2g021050 | 25.701 | 214 | 110 | 8 | 129 | 328 | 107 | 285 | 6.16e-11 | 63.9 |
MS.gene58321.t1 | MTR_4g117550 | 25.468 | 267 | 150 | 12 | 144 | 391 | 135 | 371 | 6.68e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58321.t1 | AT3G06240 | 29.279 | 222 | 131 | 11 | 149 | 360 | 182 | 387 | 3.12e-12 | 68.2 |
Find 81 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAATGGTAATCATGTAATT+TGG | 0.195983 | 8.2:+65747326 | None:intergenic |
CAAAAGGAGACAAAGGTATT+TGG | 0.245854 | 8.2:+65747352 | None:intergenic |
TACCATTTAAATCATTTATA+TGG | 0.252548 | 8.2:-65747312 | MS.gene58321:CDS |
TTAAATCATTTATATGGTTT+TGG | 0.265153 | 8.2:-65747306 | MS.gene58321:CDS |
TTTAACAAAGCTTGGATCAT+AGG | 0.271926 | 8.2:+65747242 | None:intergenic |
GATCATGGTCCTGTGTATTA+TGG | 0.291988 | 8.2:-65746991 | MS.gene58321:CDS |
TATTGTTGCATTTGACTTGA+TGG | 0.296809 | 8.2:-65747052 | MS.gene58321:CDS |
AACCATATAAATGATTTAAA+TGG | 0.308552 | 8.2:+65747310 | None:intergenic |
GGCATTCAAATTAGTGAAAT+GGG | 0.321495 | 8.2:+65747158 | None:intergenic |
TGTTAAAACTTCATCACATT+TGG | 0.327803 | 8.2:-65747226 | MS.gene58321:CDS |
TTCGAAATGGCTGATGGTTT+CGG | 0.337013 | 8.2:+65749033 | None:intergenic |
TCAAATCTTGCTGAGGTTGC+CGG | 0.349793 | 8.2:-65747692 | MS.gene58321:intron |
TTCTCATCATCATGATTTAT+CGG | 0.356404 | 8.2:-65747082 | MS.gene58321:CDS |
TCGTTGTGGGAACCGGAAAA+AGG | 0.364601 | 8.2:-65750123 | MS.gene58321:CDS |
ATAATCATACACTTGAGATA+TGG | 0.368780 | 8.2:-65746921 | MS.gene58321:CDS |
GAGTGAAGAAAGTGGCAAAA+TGG | 0.370892 | 8.2:-65747755 | MS.gene58321:CDS |
GTTAAAGAATAACCCTACTT+TGG | 0.371648 | 8.2:+65747125 | None:intergenic |
AATACAAATTGCATTTCTCT+TGG | 0.375464 | 8.2:-65746888 | MS.gene58321:CDS |
AGGCATTCAAATTAGTGAAA+TGG | 0.376920 | 8.2:+65747157 | None:intergenic |
GTCAAGAGATGATTACTTGA+TGG | 0.388833 | 8.2:-65747274 | MS.gene58321:CDS |
CAAAGAATGTCGTCATCAAT+AGG | 0.396386 | 8.2:+65746847 | None:intergenic |
TTAAAGAATAACCCTACTTT+GGG | 0.401850 | 8.2:+65747126 | None:intergenic |
TCCTGTGTATTATGGTTTGT+GGG | 0.408406 | 8.2:-65746983 | MS.gene58321:CDS |
GTCCTGTGTATTATGGTTTG+TGG | 0.421116 | 8.2:-65746984 | MS.gene58321:CDS |
ACGCGGATCGTTGTGGGAAC+CGG | 0.427242 | 8.2:-65750130 | MS.gene58321:CDS |
CATTGTAAGTGATGTAGGTT+TGG | 0.429191 | 8.2:-65750051 | MS.gene58321:CDS |
TAATCATACACTTGAGATAT+GGG | 0.430170 | 8.2:-65746920 | MS.gene58321:CDS |
GGACCATGATCAAAATCATC+TGG | 0.440055 | 8.2:+65747003 | None:intergenic |
TACAAAAGATGATTTCGAAA+TGG | 0.456809 | 8.2:+65749020 | None:intergenic |
TTAACAAAGCTTGGATCATA+GGG | 0.466951 | 8.2:+65747243 | None:intergenic |
TCTTTAACGAGGCTATTCAT+TGG | 0.470944 | 8.2:-65747110 | MS.gene58321:CDS |
TAACGAGGCTATTCATTGGT+TGG | 0.473376 | 8.2:-65747106 | MS.gene58321:CDS |
ACCCGTAGCAGATGCGGTAC+TGG | 0.480740 | 8.2:-65750172 | None:intergenic |
CCAACGACGCGGATCGTTGT+GGG | 0.488990 | 8.2:-65750136 | MS.gene58321:CDS |
TCATGTAATTTGGAATCAAA+AGG | 0.494356 | 8.2:+65747336 | None:intergenic |
TTGGTGAAGTATAAAGATAA+AGG | 0.497999 | 8.2:-65746763 | MS.gene58321:CDS |
GAGTCTCTGCTTTCACTCCA+TGG | 0.502912 | 8.2:-65746682 | MS.gene58321:CDS |
GCCTCTGCTTATCCCAAAGT+AGG | 0.503716 | 8.2:-65747138 | MS.gene58321:CDS |
ACAGGCCCTCTGCGACCCTC+AGG | 0.507260 | 8.2:-65748998 | MS.gene58321:intron |
TGGTACATTGTAAGTGATGT+AGG | 0.517286 | 8.2:-65750056 | MS.gene58321:CDS |
CTGTTCTAAACCTCTACGTA+TGG | 0.520820 | 8.2:-65747398 | MS.gene58321:CDS |
TCTCATTGAGAGATAATACA+TGG | 0.531728 | 8.2:-65747197 | MS.gene58321:CDS |
GATGATTTCGAAATGGCTGA+TGG | 0.547546 | 8.2:+65749027 | None:intergenic |
CCCACAACGATCCGCGTCGT+TGG | 0.551741 | 8.2:+65750136 | None:intergenic |
AAATTAAAGGCTCATGCAGA+GGG | 0.557567 | 8.2:-65747435 | MS.gene58321:intron |
ATTGGAACTGATGGTGATCA+CGG | 0.559403 | 8.2:-65746787 | MS.gene58321:CDS |
TACTGTTTCAGCAGCCGCGA+CGG | 0.560376 | 8.2:-65749121 | MS.gene58321:CDS |
TGATCAAAATCATCTGGAAG+AGG | 0.566442 | 8.2:+65747009 | None:intergenic |
TCAAGTAATCATCTCTTGAC+CGG | 0.568114 | 8.2:+65747277 | None:intergenic |
TGGTTGTGAAATCGAGTGGA+CGG | 0.568936 | 8.2:+65747372 | None:intergenic |
GATTGCATTGCGATAGCAGA+AGG | 0.571577 | 8.2:+65749060 | None:intergenic |
ATCGCACCATCGTTGCATGC+TGG | 0.573337 | 8.2:-65750076 | MS.gene58321:CDS |
GGTGATATTATTGGAACTGA+TGG | 0.578976 | 8.2:-65746796 | MS.gene58321:CDS |
TTCATTTCAAGATACTCTAA+CGG | 0.580796 | 8.2:+65746736 | None:intergenic |
ACCAACGACGCGGATCGTTG+TGG | 0.581216 | 8.2:-65750137 | MS.gene58321:CDS |
CCTCTGCTTATCCCAAAGTA+GGG | 0.583306 | 8.2:-65747137 | MS.gene58321:CDS |
GAAATTAAAGGCTCATGCAG+AGG | 0.590946 | 8.2:-65747436 | MS.gene58321:intron |
TGATCATTCAAATCTTGCTG+AGG | 0.596991 | 8.2:-65747699 | MS.gene58321:CDS |
GAATTTGAATGCATCTGAAG+TGG | 0.602828 | 8.2:-65746716 | MS.gene58321:CDS |
TTGGAATCAAAAGGAGACAA+AGG | 0.603002 | 8.2:+65747345 | None:intergenic |
TGCGATAGCAGAAGGCATTG+AGG | 0.605397 | 8.2:+65749068 | None:intergenic |
AAGCAGAGACTCTTTATACA+TGG | 0.605588 | 8.2:+65746693 | None:intergenic |
AACTGATGGTGATCACGGAT+TGG | 0.607196 | 8.2:-65746782 | MS.gene58321:CDS |
TATTTGGTTGTGAAATCGAG+TGG | 0.609781 | 8.2:+65747368 | None:intergenic |
CCCTACTTTGGGATAAGCAG+AGG | 0.616102 | 8.2:+65747137 | None:intergenic |
CGGCTGCTGAAACAGTAGCA+AGG | 0.635879 | 8.2:+65749127 | None:intergenic |
GCGCAGCAGAGTGAAGAAAG+TGG | 0.638118 | 8.2:-65747763 | MS.gene58321:CDS |
AGTAGGGTTATTCTTTAACG+AGG | 0.639353 | 8.2:-65747121 | MS.gene58321:CDS |
ACCCACAAACCATAATACAC+AGG | 0.646047 | 8.2:+65746982 | None:intergenic |
GTATACCTGAGGGTCGCAGA+GGG | 0.648306 | 8.2:+65748993 | None:intergenic |
AATGTACCAGCATGCAACGA+TGG | 0.657439 | 8.2:+65750070 | None:intergenic |
TGCAACGATGGTGCGATGAG+TGG | 0.658374 | 8.2:+65750082 | None:intergenic |
AAACTTGCTCACAGTCACCA+TGG | 0.665566 | 8.2:+65746665 | None:intergenic |
TGAAACATGTTGTGCCGTCG+CGG | 0.666602 | 8.2:+65749107 | None:intergenic |
TGGACGGATTCCATACGTAG+AGG | 0.678963 | 8.2:+65747388 | None:intergenic |
GCATTCAAATTAGTGAAATG+GGG | 0.681768 | 8.2:+65747159 | None:intergenic |
GGCACAACATGTTTCAACCG+CGG | 0.689792 | 8.2:-65749100 | MS.gene58321:CDS |
AGTATACCTGAGGGTCGCAG+AGG | 0.704648 | 8.2:+65748992 | None:intergenic |
ACAACATGTTTCAACCGCGG+CGG | 0.743067 | 8.2:-65749097 | MS.gene58321:CDS |
CATTGAGGAAACTACCGCCG+CGG | 0.746758 | 8.2:+65749083 | None:intergenic |
GAATCAGAAAACCAACGACG+CGG | 0.765115 | 8.2:-65750147 | MS.gene58321:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATATATCTAATTAATAAG+AGG | + | chr8.2:65746878-65746897 | None:intergenic | 10.0% |
!! | ATAATTACAGATATTAAATA+AGG | - | chr8.2:65747924-65747943 | MS.gene58321:intron | 10.0% |
!! | TTATATAAGAAACAAAAAAA+AGG | - | chr8.2:65747879-65747898 | MS.gene58321:intron | 10.0% |
!!! | AATAAAAAATTCAAACTTTT+AGG | + | chr8.2:65747297-65747316 | None:intergenic | 10.0% |
!!! | ATAAAAAATTCAAACTTTTA+GGG | + | chr8.2:65747296-65747315 | None:intergenic | 10.0% |
!!! | CATTATTTTTATGAAATTAA+AGG | - | chr8.2:65749376-65749395 | MS.gene58321:intron | 10.0% |
!!! | CTTTAATTTCATAAAAATAA+TGG | + | chr8.2:65749378-65749397 | None:intergenic | 10.0% |
!! | AACCATATAAATGATTTAAA+TGG | + | chr8.2:65749517-65749536 | None:intergenic | 15.0% |
!! | ACAACAAATAATATATTTGT+AGG | + | chr8.2:65748876-65748895 | None:intergenic | 15.0% |
!! | TACCATTTAAATCATTTATA+TGG | - | chr8.2:65749512-65749531 | MS.gene58321:intron | 15.0% |
!!! | ATTTTTTTACTTTCAAATAC+TGG | + | chr8.2:65748975-65748994 | None:intergenic | 15.0% |
!!! | TTAAATCATTTATATGGTTT+TGG | - | chr8.2:65749518-65749537 | MS.gene58321:intron | 15.0% |
!! | GTTTCTTATATAAATGATGT+TGG | + | chr8.2:65747872-65747891 | None:intergenic | 20.0% |
!! | TAAATGGTAATCATGTAATT+TGG | + | chr8.2:65749501-65749520 | None:intergenic | 20.0% |
!! | TATGAGAAACTTGATATAAT+TGG | + | chr8.2:65747485-65747504 | None:intergenic | 20.0% |
!!! | ATTTTTCAATTGGTGATTAA+CGG | - | chr8.2:65747549-65747568 | MS.gene58321:intron | 20.0% |
!!! | GCATTTAAAATCAAAACTAT+TGG | - | chr8.2:65747318-65747337 | MS.gene58321:CDS | 20.0% |
! | AACTTAGAATCACCTATTTA+GGG | - | chr8.2:65749034-65749053 | MS.gene58321:CDS | 25.0% |
! | AAGAATGAAATTCCAATTGT+TGG | + | chr8.2:65747599-65747618 | None:intergenic | 25.0% |
! | AATACAAATTGCATTTCTCT+TGG | - | chr8.2:65749936-65749955 | MS.gene58321:intron | 25.0% |
! | ACAAAAAGTGGTGATATTAT+TGG | - | chr8.2:65750019-65750038 | MS.gene58321:intron | 25.0% |
! | ACAATTGGAATTTCATTCTT+TGG | - | chr8.2:65747599-65747618 | MS.gene58321:intron | 25.0% |
! | ATAATCATACACTTGAGATA+TGG | - | chr8.2:65749903-65749922 | MS.gene58321:intron | 25.0% |
! | ATAATGGTAGATTATAACAG+AGG | - | chr8.2:65746844-65746863 | MS.gene58321:CDS | 25.0% |
! | ATACTACCATACAAATTTAG+TGG | - | chr8.2:65747521-65747540 | MS.gene58321:intron | 25.0% |
! | ATGTAGGTTTGGAAAAAAAA+AGG | - | chr8.2:65746784-65746803 | MS.gene58321:CDS | 25.0% |
! | ATTATATTCTCAATCCATGT+TGG | - | chr8.2:65747354-65747373 | MS.gene58321:CDS | 25.0% |
! | CTATATCATACACTAATGTT+TGG | + | chr8.2:65747234-65747253 | None:intergenic | 25.0% |
! | GAAACTTGATATAATTGGAA+CGG | + | chr8.2:65747480-65747499 | None:intergenic | 25.0% |
! | GATTGAGAATATAATGACTT+TGG | + | chr8.2:65747349-65747368 | None:intergenic | 25.0% |
! | TAATCATACACTTGAGATAT+GGG | - | chr8.2:65749904-65749923 | MS.gene58321:intron | 25.0% |
! | TACAAAAGATGATTTCGAAA+TGG | + | chr8.2:65747807-65747826 | None:intergenic | 25.0% |
! | TATGAAAAAATATGCCACAT+CGG | + | chr8.2:65748041-65748060 | None:intergenic | 25.0% |
! | TGATATTAACACAATTCTTG+CGG | + | chr8.2:65749251-65749270 | None:intergenic | 25.0% |
! | TGTTAAAACTTCATCACATT+TGG | - | chr8.2:65749598-65749617 | MS.gene58321:intron | 25.0% |
! | TTAAAGAATAACCCTACTTT+GGG | + | chr8.2:65749701-65749720 | None:intergenic | 25.0% |
! | TTATATTCTCAATCCATGTT+GGG | - | chr8.2:65747355-65747374 | MS.gene58321:CDS | 25.0% |
! | TTCATTTCAAGATACTCTAA+CGG | + | chr8.2:65750091-65750110 | None:intergenic | 25.0% |
! | TTCTCATCATCATGATTTAT+CGG | - | chr8.2:65749742-65749761 | MS.gene58321:intron | 25.0% |
! | TTGGTGAAGTATAAAGATAA+AGG | - | chr8.2:65750061-65750080 | MS.gene58321:CDS | 25.0% |
! | TTTATTCATATTATCCGATG+TGG | - | chr8.2:65748024-65748043 | MS.gene58321:intron | 25.0% |
!! | ACTTTTTGTATTGTATACAG+GGG | + | chr8.2:65750008-65750027 | None:intergenic | 25.0% |
!! | ATATAAATGATGTTGGTAGA+GGG | + | chr8.2:65747865-65747884 | None:intergenic | 25.0% |
!! | ATTTTGTCGGAAAAAATGAT+AGG | - | chr8.2:65748219-65748238 | MS.gene58321:intron | 25.0% |
!! | TATATAAATGATGTTGGTAG+AGG | + | chr8.2:65747866-65747885 | None:intergenic | 25.0% |
!! | TCATGTAATTTGGAATCAAA+AGG | + | chr8.2:65749491-65749510 | None:intergenic | 25.0% |
!! | TTGAAAATTTTCTCAGTCTA+TGG | - | chr8.2:65749867-65749886 | MS.gene58321:intron | 25.0% |
!!! | CACTTTTTGTATTGTATACA+GGG | + | chr8.2:65750009-65750028 | None:intergenic | 25.0% |
AAACATAATAGAGACTTCAC+CGG | + | chr8.2:65749154-65749173 | None:intergenic | 30.0% | |
AAGATATAACAGATAACCAG+TGG | - | chr8.2:65748480-65748499 | MS.gene58321:intron | 30.0% | |
ACAATAAATCACCGTTTATC+GGG | + | chr8.2:65747021-65747040 | None:intergenic | 30.0% | |
ACTGATCTACTACATAAATC+AGG | + | chr8.2:65748844-65748863 | None:intergenic | 30.0% | |
ACTGGTTATCTGTTATATCT+TGG | + | chr8.2:65748481-65748500 | None:intergenic | 30.0% | |
AGACAAAGTAATGAACTTCT+TGG | - | chr8.2:65747193-65747212 | MS.gene58321:CDS | 30.0% | |
AGGCATTCAAATTAGTGAAA+TGG | + | chr8.2:65749670-65749689 | None:intergenic | 30.0% | |
CAACTTAGAATCACCTATTT+AGG | - | chr8.2:65749033-65749052 | MS.gene58321:CDS | 30.0% | |
CCTGTATACAATACAAAAAG+TGG | - | chr8.2:65750007-65750026 | MS.gene58321:intron | 30.0% | |
CTAATCATGTATTTCACTCT+CGG | + | chr8.2:65748264-65748283 | None:intergenic | 30.0% | |
GAAATACATGATTAGCACTA+AGG | - | chr8.2:65748269-65748288 | MS.gene58321:intron | 30.0% | |
GACAATAAATCACCGTTTAT+CGG | + | chr8.2:65747022-65747041 | None:intergenic | 30.0% | |
GCATTCAAATTAGTGAAATG+GGG | + | chr8.2:65749668-65749687 | None:intergenic | 30.0% | |
GGCATTCAAATTAGTGAAAT+GGG | + | chr8.2:65749669-65749688 | None:intergenic | 30.0% | |
GTTAAAGAATAACCCTACTT+TGG | + | chr8.2:65749702-65749721 | None:intergenic | 30.0% | |
TAGAGACCACTAAATTTGTA+TGG | + | chr8.2:65747530-65747549 | None:intergenic | 30.0% | |
TAGCAAAACCCAATAACTAT+TGG | - | chr8.2:65747959-65747978 | MS.gene58321:intron | 30.0% | |
TATCATACACTAATGTTTGG+TGG | + | chr8.2:65747231-65747250 | None:intergenic | 30.0% | |
TCAAATGTGTTTGTAAGTCA+TGG | - | chr8.2:65749173-65749192 | MS.gene58321:intron | 30.0% | |
TCTCATTGAGAGATAATACA+TGG | - | chr8.2:65749627-65749646 | MS.gene58321:intron | 30.0% | |
TTAACAAAGCTTGGATCATA+GGG | + | chr8.2:65749584-65749603 | None:intergenic | 30.0% | |
TTCTTGCACCAATAGTTATT+GGG | + | chr8.2:65747970-65747989 | None:intergenic | 30.0% | |
TTGATCATCAGTAGAAACAA+AGG | - | chr8.2:65748171-65748190 | MS.gene58321:intron | 30.0% | |
TTTAACAAAGCTTGGATCAT+AGG | + | chr8.2:65749585-65749604 | None:intergenic | 30.0% | |
TTTCTTGCACCAATAGTTAT+TGG | + | chr8.2:65747971-65747990 | None:intergenic | 30.0% | |
! | TTCGAAATCATCTTTTGTAC+AGG | - | chr8.2:65747808-65747827 | MS.gene58321:intron | 30.0% |
! | TTTGATTGCACTCATTGATT+TGG | - | chr8.2:65747622-65747641 | MS.gene58321:intron | 30.0% |
!! | AGTGGTCTCTATTTTTCAAT+TGG | - | chr8.2:65747539-65747558 | MS.gene58321:intron | 30.0% |
!! | ATGCTATTTCATCCAACAAT+TGG | - | chr8.2:65747584-65747603 | MS.gene58321:intron | 30.0% |
!! | GATGAAGTTTTAACAAAGCT+TGG | + | chr8.2:65749593-65749612 | None:intergenic | 30.0% |
!! | TATTGTTGCATTTGACTTGA+TGG | - | chr8.2:65749772-65749791 | MS.gene58321:intron | 30.0% |
!!! | CCACTTTTTGTATTGTATAC+AGG | + | chr8.2:65750010-65750029 | None:intergenic | 30.0% |
!!! | CTTTTTTTTGTCCCGATAAA+CGG | - | chr8.2:65747007-65747026 | MS.gene58321:CDS | 30.0% |
!!! | GTTTTAGTTTCAACATGTTC+TGG | + | chr8.2:65748999-65749018 | None:intergenic | 30.0% |
!!! | TATATGGTTTTGGTTATGAC+CGG | - | chr8.2:65749528-65749547 | MS.gene58321:intron | 30.0% |
AAATTAAAGGCTCATGCAGA+GGG | - | chr8.2:65749389-65749408 | MS.gene58321:intron | 35.0% | |
AAGCAGAGACTCTTTATACA+TGG | + | chr8.2:65750134-65750153 | None:intergenic | 35.0% | |
AATAAAATGTATCCCGTGCT+TGG | - | chr8.2:65747148-65747167 | MS.gene58321:CDS | 35.0% | |
AGAATTATGGCCATGGTTAA+TGG | + | chr8.2:65749320-65749339 | None:intergenic | 35.0% | |
AGTAGGGTTATTCTTTAACG+AGG | - | chr8.2:65749703-65749722 | MS.gene58321:intron | 35.0% | |
ATACATGATTAGCACTAAGG+TGG | - | chr8.2:65748272-65748291 | MS.gene58321:intron | 35.0% | |
ATATAACAGATAACCAGTGG+TGG | - | chr8.2:65748483-65748502 | MS.gene58321:intron | 35.0% | |
ATCCTTGAGTTACTTATTCG+TGG | - | chr8.2:65748780-65748799 | MS.gene58321:intron | 35.0% | |
CAAAAGAGTGGTCAGATAAT+TGG | + | chr8.2:65748611-65748630 | None:intergenic | 35.0% | |
CAAAGAATGTCGTCATCAAT+AGG | + | chr8.2:65749980-65749999 | None:intergenic | 35.0% | |
CATTGTAAGTGATGTAGGTT+TGG | - | chr8.2:65746773-65746792 | MS.gene58321:CDS | 35.0% | |
GAATTTGAATGCATCTGAAG+TGG | - | chr8.2:65750108-65750127 | MS.gene58321:CDS | 35.0% | |
GGTGATATTATTGGAACTGA+TGG | - | chr8.2:65750028-65750047 | MS.gene58321:intron | 35.0% | |
GGTTAAGTGAAGCAGAATTA+TGG | + | chr8.2:65749333-65749352 | None:intergenic | 35.0% | |
GGTTTGGAAAAAAAAAGGTG+AGG | - | chr8.2:65746789-65746808 | MS.gene58321:CDS | 35.0% | |
GTCAAGAGATGATTACTTGA+TGG | - | chr8.2:65749550-65749569 | MS.gene58321:intron | 35.0% | |
GTCGAGGAAGTAGAAAATTA+TGG | + | chr8.2:65749354-65749373 | None:intergenic | 35.0% | |
TACATGATTAGCACTAAGGT+GGG | - | chr8.2:65748273-65748292 | MS.gene58321:intron | 35.0% | |
TATTAACACAATTCTTGCGG+CGG | + | chr8.2:65749248-65749267 | None:intergenic | 35.0% | |
TATTTGGTTGTGAAATCGAG+TGG | + | chr8.2:65749459-65749478 | None:intergenic | 35.0% | |
TCAAGTAATCATCTCTTGAC+CGG | + | chr8.2:65749550-65749569 | None:intergenic | 35.0% | |
TCATAAAAATAATGGCGTCG+AGG | + | chr8.2:65749370-65749389 | None:intergenic | 35.0% | |
TCGGAAAAAATGATAGGCTA+AGG | - | chr8.2:65748225-65748244 | MS.gene58321:intron | 35.0% | |
TCTACTACATAAATCAGGCA+TGG | + | chr8.2:65748839-65748858 | None:intergenic | 35.0% | |
TCTAGGTTTCTGCATGAATT+GGG | - | chr8.2:65748651-65748670 | MS.gene58321:intron | 35.0% | |
TCTTTAACGAGGCTATTCAT+TGG | - | chr8.2:65749714-65749733 | MS.gene58321:intron | 35.0% | |
TGAATGAATTGATCCCAACA+TGG | + | chr8.2:65747371-65747390 | None:intergenic | 35.0% | |
TGATCAAAATCATCTGGAAG+AGG | + | chr8.2:65749818-65749837 | None:intergenic | 35.0% | |
TGATCATTCAAATCTTGCTG+AGG | - | chr8.2:65749125-65749144 | MS.gene58321:CDS | 35.0% | |
TGGTACATTGTAAGTGATGT+AGG | - | chr8.2:65746768-65746787 | MS.gene58321:CDS | 35.0% | |
TTCCGACAAAATGTTCAACA+TGG | + | chr8.2:65748211-65748230 | None:intergenic | 35.0% | |
TTCGAAACATCCATTAACCA+TGG | - | chr8.2:65749307-65749326 | MS.gene58321:intron | 35.0% | |
TTCTAGGTTTCTGCATGAAT+TGG | - | chr8.2:65748650-65748669 | MS.gene58321:intron | 35.0% | |
TTGGAAAAAAAAAGGTGAGG+TGG | - | chr8.2:65746792-65746811 | MS.gene58321:CDS | 35.0% | |
TTGGAATCAAAAGGAGACAA+AGG | + | chr8.2:65749482-65749501 | None:intergenic | 35.0% | |
! | TCCTGTGTATTATGGTTTGT+GGG | - | chr8.2:65749841-65749860 | MS.gene58321:intron | 35.0% |
! | TGCCATGTTGAACATTTTGT+CGG | - | chr8.2:65748206-65748225 | MS.gene58321:intron | 35.0% |
! | TTTTCCCTATTCACTGAACT+TGG | + | chr8.2:65748349-65748368 | None:intergenic | 35.0% |
!! | CAAAAGGAGACAAAGGTATT+TGG | + | chr8.2:65749475-65749494 | None:intergenic | 35.0% |
!! | CTTCCAGATGATTTTGATCA+TGG | - | chr8.2:65749818-65749837 | MS.gene58321:intron | 35.0% |
AAGAGTGGTCAGATAATTGG+CGG | + | chr8.2:65748608-65748627 | None:intergenic | 40.0% | |
AATATCAAGAACTCCACCTC+CGG | - | chr8.2:65749264-65749283 | MS.gene58321:intron | 40.0% | |
ACATGCGAAATTGCAAAGTG+AGG | + | chr8.2:65749217-65749236 | None:intergenic | 40.0% | |
ACCCACAAACCATAATACAC+AGG | + | chr8.2:65749845-65749864 | None:intergenic | 40.0% | |
ACGCCTACTCAAATGTAGTA+TGG | + | chr8.2:65748534-65748553 | None:intergenic | 40.0% | |
AGAAGCAGGATATAAAGCCT+TGG | + | chr8.2:65748401-65748420 | None:intergenic | 40.0% | |
AGGTTGTCACAATAGATGAC+TGG | - | chr8.2:65748304-65748323 | MS.gene58321:intron | 40.0% | |
AGTAGGCGTAGAGATTTAGT+AGG | - | chr8.2:65748545-65748564 | MS.gene58321:intron | 40.0% | |
CATGCGAAATTGCAAAGTGA+GGG | + | chr8.2:65749216-65749235 | None:intergenic | 40.0% | |
CGCCTACTCAAATGTAGTAT+GGG | + | chr8.2:65748533-65748552 | None:intergenic | 40.0% | |
GAAAAAAAAAGGTGAGGTGG+CGG | - | chr8.2:65746795-65746814 | MS.gene58321:CDS | 40.0% | |
GAAATTAAAGGCTCATGCAG+AGG | - | chr8.2:65749388-65749407 | MS.gene58321:intron | 40.0% | |
GAGTGAAGAAAGTGGCAAAA+TGG | - | chr8.2:65749069-65749088 | MS.gene58321:CDS | 40.0% | |
GATCATGGTCCTGTGTATTA+TGG | - | chr8.2:65749833-65749852 | MS.gene58321:intron | 40.0% | |
GATGATTATATCTCCACCAC+TGG | + | chr8.2:65748499-65748518 | None:intergenic | 40.0% | |
GATGATTTCGAAATGGCTGA+TGG | + | chr8.2:65747800-65747819 | None:intergenic | 40.0% | |
GCAATATTCCACCACTCAAT+TGG | - | chr8.2:65747400-65747419 | MS.gene58321:CDS | 40.0% | |
GGACCATGATCAAAATCATC+TGG | + | chr8.2:65749824-65749843 | None:intergenic | 40.0% | |
GTAGGCGTAGAGATTTAGTA+GGG | - | chr8.2:65748546-65748565 | MS.gene58321:intron | 40.0% | |
GTCACAATAGATGACTGGAT+TGG | - | chr8.2:65748309-65748328 | MS.gene58321:intron | 40.0% | |
GTCCTGTGTATTATGGTTTG+TGG | - | chr8.2:65749840-65749859 | MS.gene58321:intron | 40.0% | |
TAACGAGGCTATTCATTGGT+TGG | - | chr8.2:65749718-65749737 | MS.gene58321:intron | 40.0% | |
TACTCAAATGTAGTATGGGC+AGG | + | chr8.2:65748529-65748548 | None:intergenic | 40.0% | |
TACTTATTCGTGGCAGACAA+TGG | - | chr8.2:65748790-65748809 | MS.gene58321:intron | 40.0% | |
TCTATAGAGCGAATTCCAAC+CGG | + | chr8.2:65749286-65749305 | None:intergenic | 40.0% | |
TGCCACGAATAAGTAACTCA+AGG | + | chr8.2:65748785-65748804 | None:intergenic | 40.0% | |
TGCCCATACTACATTTGAGT+AGG | - | chr8.2:65748528-65748547 | MS.gene58321:intron | 40.0% | |
TTATATCCTGCTTCTGTGGA+AGG | - | chr8.2:65748406-65748425 | MS.gene58321:intron | 40.0% | |
TTCGAAATGGCTGATGGTTT+CGG | + | chr8.2:65747794-65747813 | None:intergenic | 40.0% | |
! | ATTGGAACTGATGGTGATCA+CGG | - | chr8.2:65750037-65750056 | MS.gene58321:intron | 40.0% |
! | CTGTTCTAAACCTCTACGTA+TGG | - | chr8.2:65749426-65749445 | MS.gene58321:intron | 40.0% |
! | GCGGAAGATTTCTAAAGAGA+GGG | - | chr8.2:65746814-65746833 | MS.gene58321:CDS | 40.0% |
AAGAGAGGGCAGAGCTATAA+TGG | - | chr8.2:65746828-65746847 | MS.gene58321:CDS | 45.0% | |
AATGTACCAGCATGCAACGA+TGG | + | chr8.2:65746757-65746776 | None:intergenic | 45.0% | |
ACCACTCAATTGGATCTGAG+TGG | - | chr8.2:65747410-65747429 | MS.gene58321:CDS | 45.0% | |
ACTCAGATCCAATTGAGTGG+TGG | + | chr8.2:65747411-65747430 | None:intergenic | 45.0% | |
AGAAACCTAGAACGACGCAT+TGG | + | chr8.2:65748642-65748661 | None:intergenic | 45.0% | |
AGAGTGGTCAGATAATTGGC+GGG | + | chr8.2:65748607-65748626 | None:intergenic | 45.0% | |
ATGATTAGCACTAAGGTGGG+TGG | - | chr8.2:65748276-65748295 | MS.gene58321:intron | 45.0% | |
ATTGATATCCTCCCGCAAGT+TGG | - | chr8.2:65748073-65748092 | MS.gene58321:intron | 45.0% | |
CCACTCAATTGGATCTGAGT+GGG | - | chr8.2:65747411-65747430 | MS.gene58321:CDS | 45.0% | |
CCTCTGCTTATCCCAAAGTA+GGG | - | chr8.2:65749687-65749706 | MS.gene58321:intron | 45.0% | |
CTTTCAGACCATCCAACTTG+CGG | + | chr8.2:65748088-65748107 | None:intergenic | 45.0% | |
GAATCAGAAAACCAACGACG+CGG | - | chr8.2:65746677-65746696 | MS.gene58321:CDS | 45.0% | |
GATTGCATTGCGATAGCAGA+AGG | + | chr8.2:65747767-65747786 | None:intergenic | 45.0% | |
GGAACGGTGAAAGAGTTGTT+CGG | + | chr8.2:65747464-65747483 | None:intergenic | 45.0% | |
GGTCTGAGTAGTATACCTGA+GGG | + | chr8.2:65747844-65747863 | None:intergenic | 45.0% | |
GTGAAGCAGAATTATGGCCA+TGG | + | chr8.2:65749327-65749346 | None:intergenic | 45.0% | |
GTGGCCAAGTTCAGTGAATA+GGG | - | chr8.2:65748342-65748361 | MS.gene58321:intron | 45.0% | |
TCAAATCTTGCTGAGGTTGC+CGG | - | chr8.2:65749132-65749151 | MS.gene58321:CDS | 45.0% | |
TGGTTGTGAAATCGAGTGGA+CGG | + | chr8.2:65749455-65749474 | None:intergenic | 45.0% | |
TGTGGCCAAGTTCAGTGAAT+AGG | - | chr8.2:65748341-65748360 | MS.gene58321:intron | 45.0% | |
TTGGACTGCACTCAAAAGAG+TGG | + | chr8.2:65748623-65748642 | None:intergenic | 45.0% | |
TTGTGCTGAAGGCAATGTCT+AGG | - | chr8.2:65748683-65748702 | MS.gene58321:intron | 45.0% | |
TTTCAGACCATCCAACTTGC+GGG | + | chr8.2:65748087-65748106 | None:intergenic | 45.0% | |
TTTCGAGAGCTCCAAGAGAT+GGG | - | chr8.2:65748448-65748467 | MS.gene58321:intron | 45.0% | |
! | AAACTTGCTCACAGTCACCA+TGG | + | chr8.2:65750162-65750181 | None:intergenic | 45.0% |
! | AACTGATGGTGATCACGGAT+TGG | - | chr8.2:65750042-65750061 | MS.gene58321:CDS | 45.0% |
! | GGCGGAAGATTTCTAAAGAG+AGG | - | chr8.2:65746813-65746832 | MS.gene58321:CDS | 45.0% |
! | GGCTTTATATCCTGCTTCTG+TGG | - | chr8.2:65748402-65748421 | MS.gene58321:intron | 45.0% |
!! | CTTGCCTTGACTTGTTCGAT+TGG | - | chr8.2:65747655-65747674 | MS.gene58321:intron | 45.0% |
!! | GAGTAAGGCTCAAGTATTGG+AGG | - | chr8.2:65748707-65748726 | MS.gene58321:intron | 45.0% |
!! | TAGATGACTGGATTGGCTGT+TGG | - | chr8.2:65748316-65748335 | MS.gene58321:intron | 45.0% |
!! | TGAAAGAGTTGTTCGGTGCA+AGG | + | chr8.2:65747457-65747476 | None:intergenic | 45.0% |
!! | TTTTCGAGAGCTCCAAGAGA+TGG | - | chr8.2:65748447-65748466 | MS.gene58321:intron | 45.0% |
AATGTATCCCGTGCTTGGCA+CGG | - | chr8.2:65747153-65747172 | MS.gene58321:CDS | 50.0% | |
ACAACATGTTTCAACCGCGG+CGG | - | chr8.2:65747727-65747746 | MS.gene58321:CDS | 50.0% | |
ACACGTTGAGTGAGCTGCTA+TGG | + | chr8.2:65748375-65748394 | None:intergenic | 50.0% | |
AGCAAACCTAGGACGAAGCA+GGG | - | chr8.2:65748125-65748144 | MS.gene58321:intron | 50.0% | |
AGGCAATGTCTAGGCGAGTA+AGG | - | chr8.2:65748692-65748711 | MS.gene58321:intron | 50.0% | |
ATAGAGCGAATTCCAACCGG+AGG | + | chr8.2:65749283-65749302 | None:intergenic | 50.0% | |
CACGTTGAGTGAGCTGCTAT+GGG | + | chr8.2:65748374-65748393 | None:intergenic | 50.0% | |
CCCACTCAGATCCAATTGAG+TGG | + | chr8.2:65747414-65747433 | None:intergenic | 50.0% | |
CCTGCCAATCGAACAAGTCA+AGG | + | chr8.2:65747662-65747681 | None:intergenic | 50.0% | |
CTCACTCAACGTGTAAGCCA+AGG | - | chr8.2:65748381-65748400 | MS.gene58321:intron | 50.0% | |
GAGTCTCTGCTTTCACTCCA+TGG | - | chr8.2:65750142-65750161 | MS.gene58321:CDS | 50.0% | |
GATGAAGAGGCCTTTGTCAC+AGG | - | chr8.2:65748579-65748598 | MS.gene58321:intron | 50.0% | |
GCAACTTGCACAGCAAACCT+AGG | - | chr8.2:65748114-65748133 | MS.gene58321:intron | 50.0% | |
GCAGACAATGGAGCGAATGT+TGG | - | chr8.2:65748802-65748821 | MS.gene58321:intron | 50.0% | |
GCCTCTGCTTATCCCAAAGT+AGG | - | chr8.2:65749686-65749705 | MS.gene58321:intron | 50.0% | |
GGCACAACATGTTTCAACCG+CGG | - | chr8.2:65747724-65747743 | MS.gene58321:CDS | 50.0% | |
GGCGAGTAAGGCTCAAGTAT+TGG | - | chr8.2:65748704-65748723 | MS.gene58321:intron | 50.0% | |
GGCGTAGAGATTTAGTAGGG+CGG | - | chr8.2:65748549-65748568 | MS.gene58321:intron | 50.0% | |
GGGTCTGAGTAGTATACCTG+AGG | + | chr8.2:65747845-65747864 | None:intergenic | 50.0% | |
TCGTTGTGGGAACCGGAAAA+AGG | - | chr8.2:65746701-65746720 | MS.gene58321:CDS | 50.0% | |
TGAAACATGTTGTGCCGTCG+CGG | + | chr8.2:65747720-65747739 | None:intergenic | 50.0% | |
TGCTGCGCGTAACCCTAAAT+AGG | + | chr8.2:65749049-65749068 | None:intergenic | 50.0% | |
TTGTGGGAACCGGAAAAAGG+TGG | - | chr8.2:65746704-65746723 | MS.gene58321:CDS | 50.0% | |
! | ATATCCTCCCGCAAGTTGGA+TGG | - | chr8.2:65748077-65748096 | MS.gene58321:intron | 50.0% |
! | GGCGAGTTTGTTTGTGCTGA+AGG | - | chr8.2:65748672-65748691 | MS.gene58321:intron | 50.0% |
! | TGGACGGATTCCATACGTAG+AGG | + | chr8.2:65749439-65749458 | None:intergenic | 50.0% |
!! | CCCTACTTTGGGATAAGCAG+AGG | + | chr8.2:65749690-65749709 | None:intergenic | 50.0% |
!! | CCTTGACTTGTTCGATTGGC+AGG | - | chr8.2:65747659-65747678 | MS.gene58321:intron | 50.0% |
!! | TGCGATAGCAGAAGGCATTG+AGG | + | chr8.2:65747759-65747778 | None:intergenic | 50.0% |
ACCGGAAAAAGGTGGTGTGG+AGG | - | chr8.2:65746712-65746731 | MS.gene58321:CDS | 55.0% | |
AGTATACCTGAGGGTCGCAG+AGG | + | chr8.2:65747835-65747854 | None:intergenic | 55.0% | |
ATCGCACCATCGTTGCATGC+TGG | - | chr8.2:65746748-65746767 | MS.gene58321:CDS | 55.0% | |
ATGTATCCCGTGCTTGGCAC+GGG | - | chr8.2:65747154-65747173 | MS.gene58321:CDS | 55.0% | |
CAAACCTAGGACGAAGCAGG+GGG | - | chr8.2:65748127-65748146 | MS.gene58321:intron | 55.0% | |
CAGCAAACCTAGGACGAAGC+AGG | - | chr8.2:65748124-65748143 | MS.gene58321:intron | 55.0% | |
CATTGAGGAAACTACCGCCG+CGG | + | chr8.2:65747744-65747763 | None:intergenic | 55.0% | |
CCGGAAAAAGGTGGTGTGGA+GGG | - | chr8.2:65746713-65746732 | MS.gene58321:CDS | 55.0% | |
CGGAAAAAGGTGGTGTGGAG+GGG | - | chr8.2:65746714-65746733 | MS.gene58321:CDS | 55.0% | |
CGGCTGCTGAAACAGTAGCA+AGG | + | chr8.2:65747700-65747719 | None:intergenic | 55.0% | |
GATACTCGGTTGGGGACGAT+AGG | - | chr8.2:65748746-65748765 | MS.gene58321:intron | 55.0% | |
GCAAACCTAGGACGAAGCAG+GGG | - | chr8.2:65748126-65748145 | MS.gene58321:intron | 55.0% | |
GCAGTCCAATGCGTCGTTCT+AGG | - | chr8.2:65748634-65748653 | MS.gene58321:intron | 55.0% | |
GCGCAGCAGAGTGAAGAAAG+TGG | - | chr8.2:65749061-65749080 | MS.gene58321:CDS | 55.0% | |
GGAACCGGAAAAAGGTGGTG+TGG | - | chr8.2:65746709-65746728 | MS.gene58321:CDS | 55.0% | |
GTATACCTGAGGGTCGCAGA+GGG | + | chr8.2:65747834-65747853 | None:intergenic | 55.0% | |
TACTGTTTCAGCAGCCGCGA+CGG | - | chr8.2:65747703-65747722 | MS.gene58321:CDS | 55.0% | |
TCAAGAACTCCACCTCCGGT+TGG | - | chr8.2:65749268-65749287 | MS.gene58321:intron | 55.0% | |
TCCAACGAGCGCTCGATACT+CGG | - | chr8.2:65748732-65748751 | MS.gene58321:intron | 55.0% | |
TGCAACGATGGTGCGATGAG+TGG | + | chr8.2:65746745-65746764 | None:intergenic | 55.0% | |
TGTAGTATGGGCAGGCGTCA+AGG | + | chr8.2:65748521-65748540 | None:intergenic | 55.0% | |
TTGGCAGCACACCCATCTCT+TGG | + | chr8.2:65748462-65748481 | None:intergenic | 55.0% | |
! | CCCTCCACACCACCTTTTTC+CGG | + | chr8.2:65746716-65746735 | None:intergenic | 55.0% |
!! | CTGGATTGGCTGTTGGAGTG+TGG | - | chr8.2:65748323-65748342 | MS.gene58321:intron | 55.0% |
!! | TTGGCGGGTTCCTGTGACAA+AGG | + | chr8.2:65748592-65748611 | None:intergenic | 55.0% |
ACCAACGACGCGGATCGTTG+TGG | - | chr8.2:65746687-65746706 | MS.gene58321:CDS | 60.0% | |
ACGAGCGCTCGATACTCGGT+TGG | - | chr8.2:65748736-65748755 | MS.gene58321:intron | 60.0% | |
ACGCGGATCGTTGTGGGAAC+CGG | - | chr8.2:65746694-65746713 | MS.gene58321:CDS | 60.0% | |
CAAACCCCCTGCTTCGTCCT+AGG | + | chr8.2:65748134-65748153 | None:intergenic | 60.0% | |
CACTAAGGTGGGTGGCATCG+AGG | - | chr8.2:65748284-65748303 | MS.gene58321:intron | 60.0% | |
CAGACCATCCAACTTGCGGG+AGG | + | chr8.2:65748084-65748103 | None:intergenic | 60.0% | |
CCAACGACGCGGATCGTTGT+GGG | - | chr8.2:65746688-65746707 | MS.gene58321:CDS | 60.0% | |
CGAGCGCTCGATACTCGGTT+GGG | - | chr8.2:65748737-65748756 | MS.gene58321:intron | 60.0% | |
CTAGGACGAAGCAGGGGGTT+TGG | - | chr8.2:65748132-65748151 | MS.gene58321:intron | 60.0% | |
GAGCGAATTCCAACCGGAGG+TGG | + | chr8.2:65749280-65749299 | None:intergenic | 60.0% | |
GAGCGCTCGATACTCGGTTG+GGG | - | chr8.2:65748738-65748757 | MS.gene58321:intron | 60.0% | |
GCTCGACCTTCCACAGAAGC+AGG | + | chr8.2:65748415-65748434 | None:intergenic | 60.0% | |
TGTATCCCGTGCTTGGCACG+GGG | - | chr8.2:65747155-65747174 | MS.gene58321:CDS | 60.0% | |
!! | ACCGAGTATCGAGCGCTCGT+TGG | + | chr8.2:65748736-65748755 | None:intergenic | 60.0% |
CCCACAACGATCCGCGTCGT+TGG | + | chr8.2:65746691-65746710 | None:intergenic | 65.0% | |
GGGCGGTCGACGAGATGAAG+AGG | - | chr8.2:65748566-65748585 | MS.gene58321:intron | 65.0% | |
GTAACGCCCCGTGCCAAGCA+CGG | + | chr8.2:65747164-65747183 | None:intergenic | 65.0% | |
TAACGCCCCGTGCCAAGCAC+GGG | + | chr8.2:65747163-65747182 | None:intergenic | 65.0% | |
ACAGGCCCTCTGCGACCCTC+AGG | - | chr8.2:65747826-65747845 | MS.gene58321:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 65746663 | 65750183 | 65746663 | ID=MS.gene58321 |
chr8.2 | mRNA | 65746663 | 65750183 | 65746663 | ID=MS.gene58321.t1;Parent=MS.gene58321 |
chr8.2 | exon | 65750041 | 65750183 | 65750041 | ID=MS.gene58321.t1.exon1;Parent=MS.gene58321.t1 |
chr8.2 | CDS | 65750041 | 65750183 | 65750041 | ID=cds.MS.gene58321.t1;Parent=MS.gene58321.t1 |
chr8.2 | exon | 65748999 | 65749161 | 65748999 | ID=MS.gene58321.t1.exon2;Parent=MS.gene58321.t1 |
chr8.2 | CDS | 65748999 | 65749161 | 65748999 | ID=cds.MS.gene58321.t1;Parent=MS.gene58321.t1 |
chr8.2 | exon | 65747693 | 65747791 | 65747693 | ID=MS.gene58321.t1.exon3;Parent=MS.gene58321.t1 |
chr8.2 | CDS | 65747693 | 65747791 | 65747693 | ID=cds.MS.gene58321.t1;Parent=MS.gene58321.t1 |
chr8.2 | exon | 65746663 | 65747448 | 65746663 | ID=MS.gene58321.t1.exon4;Parent=MS.gene58321.t1 |
chr8.2 | CDS | 65746663 | 65747448 | 65746663 | ID=cds.MS.gene58321.t1;Parent=MS.gene58321.t1 |
Gene Sequence |
Protein sequence |