AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene033443


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033443.t1 MTR_8g102520 64.829 381 74 5 1 380 1 322 3.22e-167 470
MS.gene033443.t1 MTR_7g079400 57.742 310 108 5 76 380 46 337 1.47e-114 337
MS.gene033443.t1 MTR_7g079370 51.143 350 152 7 37 378 16 354 2.12e-107 320
MS.gene033443.t1 MTR_2g048580 49.367 395 132 13 1 380 1 342 6.59e-106 315
MS.gene033443.t1 MTR_6g060650 44.554 404 167 14 1 379 1 372 2.25e-83 259
MS.gene033443.t1 MTR_1g055135 43.003 393 186 10 2 380 7 375 2.82e-82 256
MS.gene033443.t1 MTR_5g070080 42.822 404 174 16 3 376 5 381 3.20e-81 253
MS.gene033443.t1 MTR_8g098830 70.588 170 49 1 185 354 32 200 1.12e-80 247
MS.gene033443.t1 MTR_5g070088 40.347 404 187 13 3 376 2 381 1.15e-80 252
MS.gene033443.t1 MTR_4g109270 44.051 395 175 16 1 380 1 364 1.16e-80 251
MS.gene033443.t1 MTR_4g109280 41.344 387 192 11 1 380 1 359 1.23e-80 251
MS.gene033443.t1 MTR_3g103020 43.333 390 177 13 6 380 18 378 3.78e-80 251
MS.gene033443.t1 MTR_4g117720 42.857 392 146 15 1 376 44 373 1.57e-79 249
MS.gene033443.t1 MTR_5g070130 42.821 390 188 13 1 376 4 372 1.02e-78 247
MS.gene033443.t1 MTR_3g034180 42.424 396 184 13 3 379 118 488 2.12e-78 249
MS.gene033443.t1 MTR_4g094365 41.353 399 180 13 1 380 1 364 4.57e-78 245
MS.gene033443.t1 MTR_4g023080 40.885 384 176 12 2 373 3 347 8.78e-78 244
MS.gene033443.t1 MTR_4g116330 42.711 391 183 13 3 380 18 380 2.16e-77 243
MS.gene033443.t1 MTR_4g117780 42.188 384 184 13 8 380 11 367 7.22e-76 239
MS.gene033443.t1 MTR_4g117850 41.860 387 182 15 4 376 19 376 3.26e-75 238
MS.gene033443.t1 MTR_3g034160 41.985 393 180 14 3 374 4 369 5.31e-75 237
MS.gene033443.t1 MTR_4g117770 41.944 391 192 11 1 380 1 367 5.76e-75 237
MS.gene033443.t1 MTR_4g117810 41.944 391 192 11 1 380 1 367 5.76e-75 237
MS.gene033443.t1 MTR_7g079420 50.000 286 91 8 101 380 905 1144 1.01e-74 251
MS.gene033443.t1 MTR_8g433040 42.268 388 178 16 3 380 13 364 1.71e-74 236
MS.gene033443.t1 MTR_8g032380 42.268 388 178 16 3 380 13 364 1.71e-74 236
MS.gene033443.t1 MTR_4g118380 42.513 374 172 10 1 350 1 355 1.75e-73 233
MS.gene033443.t1 MTR_4g021785 40.464 388 187 12 2 380 3 355 4.29e-73 232
MS.gene033443.t1 MTR_3g034130 40.970 371 177 12 2 353 3 350 7.85e-73 231
MS.gene033443.t1 MTR_5g097210 40.470 383 192 12 2 375 3 358 3.55e-72 230
MS.gene033443.t1 MTR_4g117750 42.820 383 181 10 8 379 3 358 7.60e-72 232
MS.gene033443.t1 MTR_4g117750 40.909 110 52 4 273 374 373 477 8.86e-12 66.6
MS.gene033443.t1 MTR_4g023090 38.875 391 189 13 7 374 15 378 7.98e-72 229
MS.gene033443.t1 MTR_4g023070 39.541 392 180 13 8 373 3 363 2.63e-71 228
MS.gene033443.t1 MTR_4g122850 40.476 378 184 17 19 380 12 364 7.52e-71 227
MS.gene033443.t1 MTR_4g023120 39.541 392 180 14 8 373 3 363 4.53e-70 224
MS.gene033443.t1 MTR_8g032390 39.844 384 174 13 3 376 35 371 1.38e-69 223
MS.gene033443.t1 MTR_4g023440 40.052 382 155 12 7 380 17 332 5.95e-69 220
MS.gene033443.t1 MTR_4g023190 40.310 387 180 15 2 374 4 353 2.74e-66 214
MS.gene033443.t1 MTR_4g023130 37.500 376 159 11 2 373 3 306 4.50e-65 209
MS.gene033443.t1 MTR_7g079450 72.143 140 35 1 241 380 2 137 8.77e-65 202
MS.gene033443.t1 MTR_8g013010 46.831 284 118 11 6 282 52 309 2.19e-64 208
MS.gene033443.t1 MTR_4g023380 36.634 404 183 13 2 374 10 371 1.56e-62 205
MS.gene033443.t1 MTR_4g116330 39.386 391 157 14 3 380 18 341 1.95e-62 204
MS.gene033443.t1 MTR_4g023150 38.046 389 187 14 2 374 4 354 3.54e-61 201
MS.gene033443.t1 MTR_1g055195 42.949 312 136 11 78 380 200 478 1.19e-59 201
MS.gene033443.t1 MTR_4g023200 37.398 369 177 14 22 374 24 354 2.63e-58 193
MS.gene033443.t1 MTR_4g121580 37.696 382 172 15 5 370 8 339 4.22e-54 183
MS.gene033443.t1 MTR_1g055165 34.545 385 166 15 7 380 9 318 6.49e-50 171
MS.gene033443.t1 MTR_4g118400 38.571 280 113 10 100 374 69 294 1.10e-47 164
MS.gene033443.t1 MTR_4g118370 41.288 264 112 7 114 375 33 255 2.58e-46 159
MS.gene033443.t1 MTR_4g117870 35.000 320 144 9 66 380 7 267 2.15e-45 157
MS.gene033443.t1 MTR_4g116340 42.041 245 105 10 7 246 35 247 2.40e-44 154
MS.gene033443.t1 MTR_1g055175 45.685 197 99 6 188 380 9 201 2.18e-43 150
MS.gene033443.t1 MTR_5g069120 50.532 188 75 8 18 197 1 178 6.04e-42 145
MS.gene033443.t1 MTR_8g433030 44.978 229 110 9 154 376 120 338 9.22e-42 149
MS.gene033443.t1 MTR_8g433030 43.182 88 48 2 3 89 35 121 4.04e-12 67.0
MS.gene033443.t1 MTR_4g116320 40.553 217 117 7 163 374 43 252 1.16e-37 136
MS.gene033443.t1 MTR_4g117530 35.472 265 110 9 119 380 47 253 1.29e-36 134
MS.gene033443.t1 MTR_1g055250 40.566 212 117 6 158 367 49 253 2.69e-36 135
MS.gene033443.t1 MTR_4g107820 30.890 382 215 16 8 372 36 385 2.74e-35 133
MS.gene033443.t1 MTR_4g107780 30.890 382 215 16 8 372 36 385 2.74e-35 133
MS.gene033443.t1 MTR_4g107780 30.890 382 215 16 8 372 36 385 3.35e-35 134
MS.gene033443.t1 MTR_4g107820 30.890 382 215 16 8 372 36 385 4.02e-35 133
MS.gene033443.t1 MTR_4g133170 31.065 338 190 14 8 330 4 313 5.54e-35 132
MS.gene033443.t1 MTR_8g040935 40.796 201 105 7 188 380 14 208 1.06e-34 127
MS.gene033443.t1 MTR_2g021150 32.081 346 181 16 8 330 14 328 3.46e-33 127
MS.gene033443.t1 MTR_4g117430 43.478 161 62 6 102 262 3 134 4.70e-32 118
MS.gene033443.t1 MTR_6g065980 31.579 304 166 12 8 306 16 282 1.13e-30 120
MS.gene033443.t1 MTR_6g463430 40.394 203 106 8 178 374 3 196 2.12e-30 115
MS.gene033443.t1 MTR_3g007330 29.245 318 184 10 8 316 48 333 2.45e-30 120
MS.gene033443.t1 MTR_3g013740 30.612 343 182 11 5 321 41 353 3.94e-30 120
MS.gene033443.t1 MTR_4g114700 33.577 274 114 7 102 371 9 218 5.54e-30 115
MS.gene033443.t1 MTR_3g036290 28.158 380 213 15 8 372 22 356 6.49e-30 118
MS.gene033443.t1 MTR_4g055060 30.462 325 163 14 8 306 30 317 8.25e-30 118
MS.gene033443.t1 MTR_1g094210 28.497 386 211 16 8 372 57 398 3.89e-29 117
MS.gene033443.t1 MTR_3g006670 31.250 320 163 13 8 306 49 332 1.11e-28 115
MS.gene033443.t1 MTR_3g009240 31.410 312 166 14 8 306 36 312 1.26e-28 115
MS.gene033443.t1 MTR_7g407070 30.000 350 186 13 4 319 22 346 2.53e-28 114
MS.gene033443.t1 MTR_1g094210 28.453 362 196 15 8 348 57 376 3.82e-28 114
MS.gene033443.t1 MTR_3g011100 30.395 329 177 13 8 316 235 531 3.89e-28 116
MS.gene033443.t1 MTR_5g007610 31.562 320 182 15 8 312 41 338 8.92e-28 113
MS.gene033443.t1 MTR_1g097560 30.128 312 174 11 5 308 33 308 1.58e-27 112
MS.gene033443.t1 MTR_3g009310 30.449 312 173 12 8 306 42 322 1.62e-27 112
MS.gene033443.t1 MTR_7g070880 27.913 369 206 11 8 330 21 375 6.26e-27 111
MS.gene033443.t1 MTR_3g007430 28.614 339 197 12 11 335 46 353 7.08e-27 110
MS.gene033443.t1 MTR_5g011200 29.430 316 179 15 8 308 17 303 9.82e-27 110
MS.gene033443.t1 MTR_4g118360 45.833 120 64 1 256 374 1 120 1.61e-26 103
MS.gene033443.t1 MTR_6g021880 29.042 334 175 14 19 323 31 331 1.90e-26 109
MS.gene033443.t1 MTR_4g108820 32.154 311 135 16 8 308 42 286 2.59e-26 107
MS.gene033443.t1 MTR_4g109290 39.884 173 50 6 7 172 8 133 3.73e-26 103
MS.gene033443.t1 MTR_3g010590 27.885 312 168 11 8 306 39 306 5.42e-26 108
MS.gene033443.t1 MTR_3g010870 30.097 309 172 12 8 306 37 311 9.48e-26 107
MS.gene033443.t1 MTR_5g057790 28.424 387 216 17 8 372 46 393 1.27e-25 107
MS.gene033443.t1 MTR_2g078900 28.662 314 172 12 8 306 33 309 2.44e-25 105
MS.gene033443.t1 MTR_7g070830 26.902 368 211 10 8 330 21 375 3.12e-25 106
MS.gene033443.t1 MTR_1g055070 30.797 276 152 11 6 260 47 304 3.86e-25 105
MS.gene033443.t1 MTR_3g007270 28.483 323 177 12 8 306 47 339 3.93e-25 105
MS.gene033443.t1 MTR_2g426020 27.543 403 219 14 8 377 6 368 5.42e-25 105
MS.gene033443.t1 MTR_3g023930 28.105 306 168 10 8 306 34 294 5.86e-25 104
MS.gene033443.t1 MTR_2g024110 28.000 350 209 15 8 340 4 327 6.37e-25 104
MS.gene033443.t1 MTR_8g467140 29.712 313 175 14 8 306 32 313 6.56e-25 103
MS.gene033443.t1 MTR_5g057710 28.349 321 186 13 8 315 46 335 7.95e-25 105
MS.gene033443.t1 MTR_1g068835 25.770 357 213 13 8 348 4 324 1.01e-24 104
MS.gene033443.t1 MTR_7g117720 37.089 213 97 6 2 209 4 184 1.08e-24 102
MS.gene033443.t1 MTR_7g117720 38.843 121 64 5 263 375 154 272 1.33e-13 70.9
MS.gene033443.t1 MTR_7g055870 25.527 427 241 12 8 372 13 424 1.19e-24 104
MS.gene033443.t1 MTR_0760s0010 29.545 308 164 11 13 307 52 319 1.53e-24 103
MS.gene033443.t1 MTR_3g007360 30.745 322 173 15 11 314 55 344 2.09e-24 103
MS.gene033443.t1 MTR_1g068875 26.727 333 212 12 8 330 4 314 2.19e-24 103
MS.gene033443.t1 MTR_5g022420 29.338 317 173 14 8 313 27 303 2.44e-24 103
MS.gene033443.t1 MTR_2g029990 28.707 317 173 12 9 306 52 334 2.53e-24 103
MS.gene033443.t1 MTR_0064s0160 26.934 349 195 13 7 319 41 365 2.55e-24 103
MS.gene033443.t1 MTR_3g436150 29.462 353 182 14 4 321 22 342 2.90e-24 103
MS.gene033443.t1 MTR_3g014540 29.275 386 215 15 8 372 29 377 3.56e-24 102
MS.gene033443.t1 MTR_2g426060 28.909 339 186 15 8 312 6 323 5.47e-24 102
MS.gene033443.t1 MTR_2g021190 29.487 312 179 11 8 306 21 304 5.50e-24 102
MS.gene033443.t1 MTR_2g028110 29.154 319 177 12 8 306 4 293 6.27e-24 102
MS.gene033443.t1 MTR_7g070440 29.394 330 177 16 10 313 9 308 9.01e-24 101
MS.gene033443.t1 MTR_3g010390 28.097 331 174 14 8 306 33 331 1.22e-23 101
MS.gene033443.t1 MTR_0044s0300 29.338 317 167 15 8 306 38 315 1.33e-23 101
MS.gene033443.t1 MTR_3g007410 30.435 322 174 15 11 314 55 344 1.36e-23 101
MS.gene033443.t1 MTR_7g013590 31.111 315 157 14 15 306 43 320 2.18e-23 100
MS.gene033443.t1 MTR_2g028160 26.891 357 213 11 5 330 2 341 2.88e-23 100
MS.gene033443.t1 MTR_2g046920 27.885 312 184 12 8 308 24 305 4.57e-23 99.8
MS.gene033443.t1 MTR_5g057690 27.487 382 216 17 8 372 46 383 5.63e-23 99.4
MS.gene033443.t1 MTR_2g055970 25.840 387 234 15 5 372 208 560 5.95e-23 100
MS.gene033443.t1 MTR_6g004660 26.829 328 190 13 8 312 16 316 6.61e-23 99.4
MS.gene033443.t1 MTR_3g024040 26.129 310 186 10 14 316 37 310 9.20e-23 99.0
MS.gene033443.t1 MTR_1g056710 26.623 308 194 11 8 308 34 316 9.35e-23 99.0
MS.gene033443.t1 MTR_1g054575 29.545 308 172 12 8 304 52 325 1.01e-22 100
MS.gene033443.t1 MTR_2g028140 26.786 336 192 11 5 306 2 317 1.29e-22 99.0
MS.gene033443.t1 MTR_3g014570 29.464 336 167 14 8 316 29 321 1.32e-22 98.6
MS.gene033443.t1 MTR_5g069760 26.346 353 203 14 4 328 2 325 1.70e-22 97.8
MS.gene033443.t1 MTR_2g426070 28.438 320 190 11 9 306 7 309 2.07e-22 98.2
MS.gene033443.t1 MTR_3g013770 31.962 316 169 14 8 306 33 319 2.11e-22 97.8
MS.gene033443.t1 MTR_7g062100 28.947 342 168 13 8 313 24 326 2.87e-22 97.8
MS.gene033443.t1 MTR_2g025420 26.525 377 213 17 8 341 6 361 3.21e-22 97.8
MS.gene033443.t1 MTR_3g010970 27.885 312 163 12 11 306 51 316 3.22e-22 97.4
MS.gene033443.t1 MTR_4g061340 27.523 327 186 12 8 315 26 320 3.36e-22 97.1
MS.gene033443.t1 MTR_1g050542 27.723 303 182 10 8 304 58 329 3.41e-22 97.4
MS.gene033443.t1 MTR_0115s0020 26.429 420 229 17 7 376 9 398 3.69e-22 97.4
MS.gene033443.t1 MTR_5g069930 26.807 332 192 12 6 313 4 308 3.70e-22 97.1
MS.gene033443.t1 MTR_6g017280 25.485 361 206 12 8 330 9 344 4.14e-22 97.1
MS.gene033443.t1 MTR_7g055930 25.059 427 243 13 8 372 13 424 4.18e-22 97.4
MS.gene033443.t1 MTR_3g036430 26.667 300 169 10 8 306 20 269 7.78e-22 95.9
MS.gene033443.t1 MTR_3g010520 28.710 310 162 13 8 306 25 286 1.02e-21 95.5
MS.gene033443.t1 MTR_2g046900 27.329 322 181 13 8 308 28 317 1.06e-21 95.9
MS.gene033443.t1 MTR_7g056820 25.729 377 211 14 8 351 7 347 1.14e-21 95.9
MS.gene033443.t1 MTR_1g068860 26.433 314 192 11 6 306 2 289 1.24e-21 95.5
MS.gene033443.t1 MTR_2g028130 26.796 362 205 14 5 330 2 339 1.29e-21 95.9
MS.gene033443.t1 MTR_1g054725 25.510 392 231 17 7 372 19 375 1.32e-21 95.5
MS.gene033443.t1 MTR_7g056503 27.217 327 199 12 8 313 21 329 1.37e-21 95.9
MS.gene033443.t1 MTR_2g426090 28.349 321 191 14 6 306 5 306 1.54e-21 95.9
MS.gene033443.t1 MTR_3g083010 27.348 362 202 15 8 330 6 345 1.74e-21 95.5
MS.gene033443.t1 MTR_8g062660 26.440 382 225 14 8 373 22 363 2.60e-21 96.3
MS.gene033443.t1 MTR_5g009060 30.286 350 157 20 8 306 25 338 3.61e-21 94.4
MS.gene033443.t1 MTR_2g104340 25.558 403 241 12 7 373 13 392 3.65e-21 94.4
MS.gene033443.t1 MTR_3g009260 28.526 312 184 10 8 312 41 320 3.85e-21 94.4
MS.gene033443.t1 MTR_3g030330 27.619 315 170 11 8 306 20 292 4.11e-21 94.0
MS.gene033443.t1 MTR_2g425980 28.571 322 189 12 8 306 5 308 4.23e-21 94.4
MS.gene033443.t1 MTR_0667s0010 25.568 352 206 12 8 330 6 330 6.15e-21 94.0
MS.gene033443.t1 MTR_1g115160 29.503 322 162 15 6 308 20 295 7.24e-21 93.2
MS.gene033443.t1 MTR_2g026010 28.235 340 209 13 6 330 2 321 7.48e-21 93.6
MS.gene033443.t1 MTR_4g129190 27.139 339 189 12 6 313 4 315 8.36e-21 93.2
MS.gene033443.t1 MTR_3g030240 24.601 313 174 10 8 306 40 304 8.88e-21 93.2
MS.gene033443.t1 MTR_1g097490 28.571 315 181 13 5 308 46 327 9.93e-21 93.2
MS.gene033443.t1 MTR_1g097330 28.972 321 163 15 8 306 16 293 1.07e-20 93.2
MS.gene033443.t1 MTR_5g057020 26.646 319 179 13 8 315 46 320 1.13e-20 92.4
MS.gene033443.t1 MTR_0242s0060 27.193 342 194 14 6 313 7 327 1.19e-20 93.2
MS.gene033443.t1 MTR_0242s0040 27.193 342 194 14 6 313 7 327 1.19e-20 93.2
MS.gene033443.t1 MTR_0267s0050 25.833 360 210 11 11 335 9 346 1.21e-20 92.8
MS.gene033443.t1 MTR_6g007135 28.349 321 178 14 8 306 26 316 1.78e-20 92.4
MS.gene033443.t1 MTR_2g046830 27.687 307 185 9 11 308 28 306 2.08e-20 92.4
MS.gene033443.t1 MTR_2g046800 28.161 348 167 16 8 308 14 325 2.14e-20 92.0
MS.gene033443.t1 MTR_3g010920 27.707 314 161 13 8 306 44 306 2.31e-20 92.0
MS.gene033443.t1 MTR_7g028660 26.706 337 190 12 6 313 9 317 3.02e-20 91.7
MS.gene033443.t1 MTR_0128s0020 27.859 341 179 12 6 313 16 322 3.05e-20 91.7
MS.gene033443.t1 MTR_1g442850 31.003 329 173 18 10 312 7 307 4.65e-20 90.9
MS.gene033443.t1 MTR_6g053260 27.385 325 197 11 8 320 337 634 4.93e-20 92.4
MS.gene033443.t1 MTR_7g007300 29.231 325 163 15 8 312 103 380 5.95e-20 91.3
MS.gene033443.t1 MTR_2g031720 25.849 383 224 15 8 370 6 348 6.89e-20 90.9
MS.gene033443.t1 MTR_2g021155 26.885 305 188 9 11 306 39 317 8.57e-20 91.7
MS.gene033443.t1 MTR_7g066030 25.208 361 225 12 1 330 14 360 8.77e-20 90.5
MS.gene033443.t1 MTR_4g031770 26.708 322 187 12 7 312 3 291 9.27e-20 90.1
MS.gene033443.t1 MTR_3g083640 26.452 310 183 9 8 306 55 330 9.99e-20 90.5
MS.gene033443.t1 MTR_5g046300 26.708 322 179 15 8 312 4 285 1.02e-19 89.7
MS.gene033443.t1 MTR_5g046290 26.708 322 179 15 8 312 4 285 1.02e-19 89.7
MS.gene033443.t1 MTR_7g055977 28.947 342 171 15 6 313 5 308 1.34e-19 89.7
MS.gene033443.t1 MTR_2g078850 27.742 310 177 12 11 306 33 309 2.19e-19 89.0
MS.gene033443.t1 MTR_7g077970 27.507 349 190 14 8 316 7 332 2.25e-19 89.4
MS.gene033443.t1 MTR_4g030830 24.390 369 205 12 8 330 9 349 2.50e-19 89.0
MS.gene033443.t1 MTR_3g013950 25.956 366 215 12 5 335 4 348 3.13e-19 89.0
MS.gene033443.t1 MTR_3g030310 27.778 324 171 14 8 306 21 306 4.30e-19 88.6
MS.gene033443.t1 MTR_3g024110 26.791 321 185 13 8 316 101 383 4.74e-19 88.6
MS.gene033443.t1 MTR_3g036335 24.773 331 188 12 8 316 41 332 4.85e-19 88.2
MS.gene033443.t1 MTR_3g030250 26.959 319 164 14 8 306 37 306 6.29e-19 87.8
MS.gene033443.t1 MTR_8g101580 26.603 312 190 11 8 308 45 328 6.78e-19 87.8
MS.gene033443.t1 MTR_2g021252 26.667 315 164 11 11 306 50 316 7.89e-19 87.4
MS.gene033443.t1 MTR_2g461450 27.195 353 209 13 6 348 16 330 8.72e-19 87.0
MS.gene033443.t1 MTR_2g031680 25.617 324 175 12 8 306 6 288 9.06e-19 87.4
MS.gene033443.t1 MTR_4g080200 22.689 357 230 11 6 349 1 324 1.03e-18 86.7
MS.gene033443.t1 MTR_0097s0030 28.415 366 182 14 5 330 11 336 1.19e-18 87.0
MS.gene033443.t1 MTR_2g047240 28.415 366 182 14 5 330 11 336 1.19e-18 87.0
MS.gene033443.t1 MTR_6g086825 26.555 418 233 20 7 377 69 459 1.32e-18 87.4
MS.gene033443.t1 MTR_7g016930 26.567 335 178 14 2 307 10 305 1.82e-18 85.9
MS.gene033443.t1 MTR_5g069390 26.190 420 234 19 1 371 19 411 1.96e-18 87.0
MS.gene033443.t1 MTR_6g027910 28.141 398 215 21 11 372 12 374 2.08e-18 86.3
MS.gene033443.t1 MTR_5g023000 45.745 94 48 2 289 380 7 99 2.32e-18 80.1
MS.gene033443.t1 MTR_1g088120 28.235 340 183 12 11 313 13 328 2.69e-18 86.3
MS.gene033443.t1 MTR_3g010870 30.705 241 126 10 8 240 37 244 3.00e-18 85.1
MS.gene033443.t1 MTR_4g033495 27.246 345 176 18 8 313 27 335 3.07e-18 86.3
MS.gene033443.t1 MTR_0128s0070 28.402 338 180 14 6 313 20 325 3.35e-18 85.9
MS.gene033443.t1 MTR_4g023430 50.633 79 36 1 3 78 36 114 3.78e-18 82.8
MS.gene033443.t1 MTR_6g034720 41.060 151 59 5 125 270 53 178 4.66e-18 82.4
MS.gene033443.t1 MTR_7g066000 25.937 347 220 11 8 330 25 358 5.21e-18 85.1
MS.gene033443.t1 MTR_7g062060 26.239 343 197 13 8 313 12 335 6.04e-18 85.1
MS.gene033443.t1 MTR_3g010620 26.752 314 161 14 11 306 39 301 6.41e-18 85.1
MS.gene033443.t1 MTR_3g011060 25.000 332 177 11 8 306 28 320 7.18e-18 84.7
MS.gene033443.t1 MTR_7g060940 28.448 348 164 15 8 313 22 326 7.34e-18 84.7
MS.gene033443.t1 MTR_7g078040 25.862 348 204 11 6 313 7 340 7.48e-18 85.1
MS.gene033443.t1 MTR_2g021210 27.869 305 182 12 8 306 84 356 8.12e-18 84.7
MS.gene033443.t1 MTR_7g066010 24.444 360 197 10 1 330 14 328 8.23e-18 84.3
MS.gene033443.t1 MTR_3g024150 25.077 323 167 12 11 306 38 312 8.97e-18 84.3
MS.gene033443.t1 MTR_2g047832 25.076 327 194 10 8 308 29 330 9.15e-18 84.7
MS.gene033443.t1 MTR_7g066100 25.872 344 197 12 5 313 8 328 9.45e-18 84.3
MS.gene033443.t1 MTR_3g006570 27.707 314 179 15 8 306 21 301 9.77e-18 84.3
MS.gene033443.t1 MTR_7g061060 25.401 374 190 15 5 330 10 342 1.00e-17 84.3
MS.gene033443.t1 MTR_7g445890 26.997 363 190 12 6 330 14 339 1.03e-17 84.3
MS.gene033443.t1 MTR_6g053240 24.545 330 205 11 8 320 28 330 1.45e-17 84.0
MS.gene033443.t1 MTR_7g055987 28.049 328 174 11 11 313 23 313 1.67e-17 83.6
MS.gene033443.t1 MTR_4g070550 27.273 330 192 14 5 306 2 311 1.79e-17 83.6
MS.gene033443.t1 MTR_7g077070 26.062 353 204 14 1 313 9 344 1.81e-17 84.0
MS.gene033443.t1 MTR_7g017040 24.574 411 235 16 7 373 15 394 1.85e-17 83.6
MS.gene033443.t1 MTR_1g061330 24.627 402 232 15 8 380 4 363 1.91e-17 83.6
MS.gene033443.t1 MTR_8g099460 25.967 362 219 13 5 347 2 333 3.41e-17 82.8
MS.gene033443.t1 MTR_2g033410 26.230 305 185 10 8 301 9 284 5.33e-17 82.0
MS.gene033443.t1 MTR_5g046260 26.299 308 168 13 8 312 4 255 6.31e-17 80.9
MS.gene033443.t1 MTR_2g047892 26.549 339 188 12 6 313 20 328 6.46e-17 82.0
MS.gene033443.t1 MTR_7g061090 26.000 350 186 15 6 313 20 338 7.13e-17 82.0
MS.gene033443.t1 MTR_4g030090 27.246 334 176 14 8 306 14 315 9.11e-17 81.6
MS.gene033443.t1 MTR_2g021800 24.594 431 238 15 2 373 10 412 1.00e-16 81.6
MS.gene033443.t1 MTR_2g031640 25.581 344 205 15 8 330 6 319 1.10e-16 81.3
MS.gene033443.t1 MTR_7g091630 26.176 340 198 12 5 313 29 346 1.32e-16 81.3
MS.gene033443.t1 MTR_3g006530 27.726 321 174 15 8 306 40 324 1.59e-16 80.9
MS.gene033443.t1 MTR_7g445750 27.103 321 203 12 4 301 19 331 1.63e-16 80.1
MS.gene033443.t1 MTR_2g021050 26.562 320 171 12 8 306 5 281 1.80e-16 80.5
MS.gene033443.t1 MTR_5g056020 26.496 351 199 13 4 312 13 346 2.27e-16 80.9
MS.gene033443.t1 MTR_3g010430 27.500 320 174 12 8 306 36 318 2.34e-16 80.5
MS.gene033443.t1 MTR_8g066440 26.254 339 194 10 9 313 24 340 2.65e-16 80.1
MS.gene033443.t1 MTR_5g008530 61.404 57 21 1 5 60 15 71 2.82e-16 73.2
MS.gene033443.t1 MTR_2g047200 27.374 358 163 17 6 313 18 328 2.94e-16 80.1
MS.gene033443.t1 MTR_0054s0100 25.891 421 243 21 2 377 11 407 2.94e-16 80.1
MS.gene033443.t1 MTR_0054s0090 25.783 415 249 19 2 377 11 405 3.35e-16 80.1
MS.gene033443.t1 MTR_5g037680 25.000 388 216 16 1 350 1 351 3.80e-16 80.1
MS.gene033443.t1 MTR_3g011650 30.165 242 128 9 5 233 69 282 4.08e-16 78.2
MS.gene033443.t1 MTR_2g043410 26.989 352 165 13 11 313 25 333 4.17e-16 79.7
MS.gene033443.t1 MTR_4g122860 32.178 202 87 11 192 380 156 320 4.64e-16 79.0
MS.gene033443.t1 MTR_6g055210 27.190 331 183 13 8 304 22 328 5.68e-16 79.3
MS.gene033443.t1 MTR_7g050520 27.731 357 169 19 1 313 15 326 6.55e-16 79.0
MS.gene033443.t1 MTR_7g050480 26.966 356 173 18 1 313 15 326 6.86e-16 79.0
MS.gene033443.t1 MTR_3g072470 26.611 357 164 17 11 313 22 334 7.01e-16 79.0
MS.gene033443.t1 MTR_5g096630 25.074 339 196 13 6 305 16 335 8.67e-16 78.6
MS.gene033443.t1 MTR_1g112930 25.879 313 188 12 4 304 18 298 9.63e-16 78.2
MS.gene033443.t1 MTR_6g007150 28.774 212 114 8 112 312 90 275 1.01e-15 77.8
MS.gene033443.t1 MTR_5g096710 26.879 346 184 11 5 316 20 330 1.09e-15 78.2
MS.gene033443.t1 MTR_7g057270 26.113 337 197 13 8 313 26 341 1.30e-15 78.2
MS.gene033443.t1 MTR_3g011120 27.568 370 202 18 5 342 11 346 1.33e-15 77.8
MS.gene033443.t1 MTR_7g066850 26.269 335 182 14 6 309 21 321 1.48e-15 78.2
MS.gene033443.t1 MTR_4g030980 24.324 370 188 11 8 313 15 356 1.69e-15 77.8
MS.gene033443.t1 MTR_6g090180 22.482 427 245 15 3 375 42 436 1.78e-15 77.8
MS.gene033443.t1 MTR_6g478230 24.941 421 236 18 4 379 23 408 1.89e-15 77.8
MS.gene033443.t1 MTR_3g009250 29.876 241 129 8 5 233 31 243 2.13e-15 75.5
MS.gene033443.t1 MTR_2g021770 24.938 401 235 14 19 373 23 403 2.35e-15 77.4
MS.gene033443.t1 MTR_7g078840 26.404 356 207 14 1 313 3 346 2.36e-15 77.4
MS.gene033443.t1 MTR_5g059430 23.350 394 229 11 1 342 19 391 2.41e-15 77.4
MS.gene033443.t1 MTR_4g102410 24.932 365 212 14 7 330 60 403 2.98e-15 77.4
MS.gene033443.t1 MTR_3g006500 27.134 328 162 16 8 306 17 296 3.03e-15 76.6
MS.gene033443.t1 MTR_6g048120 24.462 372 215 16 8 356 36 364 3.04e-15 77.0
MS.gene033443.t1 MTR_8g041270 23.753 421 235 14 7 373 14 402 3.60e-15 76.6
MS.gene033443.t1 MTR_5g057643 28.085 235 123 10 8 222 46 254 5.08e-15 74.7
MS.gene033443.t1 MTR_4g011660 27.171 357 185 17 5 313 16 345 5.14e-15 76.3
MS.gene033443.t1 MTR_4g030110 26.871 294 158 10 2 263 24 292 5.50e-15 76.3
MS.gene033443.t1 MTR_1g055055 27.607 326 171 14 6 316 24 299 5.80e-15 75.9
MS.gene033443.t1 MTR_5g068040 25.602 332 180 12 8 313 16 306 5.83e-15 75.9
MS.gene033443.t1 MTR_4g006350 24.533 375 212 13 8 340 494 839 7.03e-15 76.6
MS.gene033443.t1 MTR_7g055830 23.515 404 210 12 8 372 13 356 8.71e-15 75.5
MS.gene033443.t1 MTR_7g056760 25.298 336 199 11 6 311 21 334 9.57e-15 75.5
MS.gene033443.t1 MTR_2g024100 27.586 319 185 14 15 310 15 310 1.12e-14 75.5
MS.gene033443.t1 MTR_2g022000 25.223 448 237 18 2 380 10 428 1.27e-14 75.5
MS.gene033443.t1 MTR_7g061050 25.507 345 181 14 5 313 10 314 1.31e-14 75.1
MS.gene033443.t1 MTR_4g024890 24.620 329 199 11 8 313 10 312 1.33e-14 75.1
MS.gene033443.t1 MTR_5g048160 25.904 332 199 13 7 306 3 319 1.35e-14 75.1
MS.gene033443.t1 MTR_7g022600 27.507 349 194 13 5 313 20 349 1.49e-14 75.1
MS.gene033443.t1 MTR_0464s0020 26.012 346 188 13 11 313 26 346 1.52e-14 75.1
MS.gene033443.t1 MTR_5g022090 23.385 325 187 11 8 316 34 312 1.79e-14 74.7
MS.gene033443.t1 MTR_8g012090 26.944 360 180 15 2 329 10 318 2.10e-14 73.9
MS.gene033443.t1 MTR_2g010920 24.571 350 215 11 2 313 14 352 2.36e-14 74.3
MS.gene033443.t1 MTR_2g065860 26.486 370 217 14 3 344 7 349 2.61e-14 73.9
MS.gene033443.t1 MTR_7g078860 23.873 377 213 9 2 330 3 353 2.71e-14 73.9
MS.gene033443.t1 MTR_6g017305 27.347 245 130 9 113 330 15 238 3.00e-14 72.8
MS.gene033443.t1 MTR_8g046310 24.365 394 239 14 7 374 15 375 3.25e-14 73.9
MS.gene033443.t1 MTR_0128s0010 25.846 325 189 11 8 306 21 319 3.31e-14 73.9
MS.gene033443.t1 MTR_4g019990 25.770 357 185 11 8 321 6 325 3.71e-14 73.6
MS.gene033443.t1 MTR_8g063440 26.382 398 241 17 3 373 7 379 4.33e-14 73.6
MS.gene033443.t1 MTR_3g058480 27.046 281 141 11 8 260 39 283 5.54e-14 72.8
MS.gene033443.t1 MTR_3g464500 24.496 347 187 11 4 313 23 331 5.59e-14 73.2
MS.gene033443.t1 MTR_1g023400 25.770 357 207 19 14 348 9 329 5.75e-14 72.8
MS.gene033443.t1 MTR_7g067680 25.392 319 162 14 8 306 49 311 6.73e-14 72.8
MS.gene033443.t1 MTR_5g057040 30.899 178 93 7 8 173 46 205 7.84e-14 73.6
MS.gene033443.t1 MTR_3g058440 28.846 260 137 12 8 248 35 265 9.81e-14 71.6
MS.gene033443.t1 MTR_0649s0020 24.852 338 193 13 8 313 11 319 9.93e-14 72.4
MS.gene033443.t1 MTR_4g006270 27.653 311 165 16 8 304 4 268 1.10e-13 72.4
MS.gene033443.t1 MTR_4g030790 25.155 322 162 11 5 306 16 278 1.20e-13 71.6
MS.gene033443.t1 MTR_7g060960 27.914 326 171 12 2 313 26 301 1.25e-13 72.0
MS.gene033443.t1 MTR_2g010900 24.290 317 191 12 26 313 1 297 1.72e-13 71.6
MS.gene033443.t1 MTR_3g437520 25.284 352 186 13 11 313 26 349 1.95e-13 71.6
MS.gene033443.t1 MTR_2g022170 37.984 129 74 3 11 138 7 130 2.04e-13 67.4
MS.gene033443.t1 MTR_3g058470 25.705 319 161 9 8 306 37 299 2.08e-13 71.2
MS.gene033443.t1 MTR_4g013185 25.424 354 187 13 11 313 13 340 2.65e-13 71.2
MS.gene033443.t1 MTR_4g030760 23.926 326 196 9 3 313 68 356 3.26e-13 70.9
MS.gene033443.t1 MTR_5g097680 24.941 425 252 14 3 373 12 423 3.97e-13 70.9
MS.gene033443.t1 MTR_6g016285 25.656 343 194 11 6 312 19 336 4.50e-13 70.5
MS.gene033443.t1 MTR_7g055850 29.545 220 122 6 8 201 13 225 4.57e-13 69.3
MS.gene033443.t1 MTR_7g052150 27.485 342 171 17 8 313 22 322 4.61e-13 70.5
MS.gene033443.t1 MTR_4g130330 24.818 411 238 17 3 370 2 384 4.62e-13 70.5
MS.gene033443.t1 MTR_4g055820 23.496 349 199 10 3 306 9 334 4.99e-13 70.1
MS.gene033443.t1 MTR_4g013180 24.444 360 213 14 8 330 11 348 5.67e-13 70.5
MS.gene033443.t1 MTR_7g056200 23.343 347 168 9 6 312 21 309 6.63e-13 69.7
MS.gene033443.t1 MTR_1g055200 41.000 100 39 3 99 197 6 86 7.13e-13 64.7
MS.gene033443.t1 MTR_3g096280 25.309 324 161 11 20 320 17 282 7.54e-13 69.3
MS.gene033443.t1 MTR_2g021950 24.455 413 232 16 7 373 15 393 7.57e-13 69.7
MS.gene033443.t1 MTR_4g117550 24.324 407 223 17 3 373 12 369 8.99e-13 69.3
MS.gene033443.t1 MTR_3g464470 23.373 338 199 9 4 313 3 308 9.72e-13 69.3
MS.gene033443.t1 MTR_2g031700 26.255 259 152 10 8 257 6 234 1.10e-12 68.6
MS.gene033443.t1 MTR_6g013270 27.439 328 171 18 8 308 29 316 1.18e-12 69.3
MS.gene033443.t1 MTR_2g043400 25.220 341 185 13 11 313 26 334 1.18e-12 69.3
MS.gene033443.t1 MTR_4g028660 24.665 373 228 17 4 342 12 365 1.38e-12 68.9
MS.gene033443.t1 MTR_4g027450 24.665 373 228 17 4 342 12 365 1.38e-12 68.9
MS.gene033443.t1 MTR_3g023940 24.534 322 181 11 8 306 34 316 1.61e-12 68.6
MS.gene033443.t1 MTR_2g078870 28.309 272 142 13 45 306 4 232 1.83e-12 67.8
MS.gene033443.t1 MTR_7g056797 25.223 337 198 10 5 311 20 332 3.22e-12 67.8
MS.gene033443.t1 MTR_1g029650 23.684 342 191 14 8 313 8 315 3.26e-12 67.8
MS.gene033443.t1 MTR_4g013175 26.685 371 190 15 6 321 8 351 3.34e-12 67.8
MS.gene033443.t1 MTR_1g055375 25.076 327 193 14 7 312 3 298 3.57e-12 67.4
MS.gene033443.t1 MTR_3g030350 26.032 315 180 14 8 306 35 312 3.99e-12 67.4
MS.gene033443.t1 MTR_1g007410 23.513 353 206 12 2 314 16 344 4.52e-12 67.4
MS.gene033443.t1 MTR_7g050490 31.674 221 98 13 1 201 1 188 7.26e-12 64.3
MS.gene033443.t1 MTR_4g028750 26.100 341 195 16 5 309 13 332 9.23e-12 66.2
MS.gene033443.t1 MTR_2g437110 24.129 402 241 14 6 372 20 392 1.10e-11 66.6
MS.gene033443.t1 MTR_1g009110 24.259 371 226 12 4 348 10 351 1.10e-11 66.2
MS.gene033443.t1 MTR_1004s0010 28.070 228 118 10 86 307 102 289 1.32e-11 65.9
MS.gene033443.t1 MTR_7g052670 24.586 423 246 15 6 372 19 424 1.65e-11 65.9
MS.gene033443.t1 MTR_6g017295 26.199 271 139 11 96 328 40 287 1.89e-11 65.9
MS.gene033443.t1 MTR_3g096250 27.010 311 145 11 8 306 47 287 2.03e-11 65.1
MS.gene033443.t1 MTR_3g083660 31.579 152 85 6 155 306 74 206 2.04e-11 64.3
MS.gene033443.t1 MTR_0831s0010 25.707 389 196 22 2 342 44 387 2.52e-11 65.1
MS.gene033443.t1 MTR_1g115185 26.115 314 185 14 11 308 42 324 2.94e-11 64.7
MS.gene033443.t1 MTR_7g017130 25.183 409 234 19 8 376 18 394 3.04e-11 64.7
MS.gene033443.t1 MTR_7g056710 27.300 337 174 15 8 313 18 314 3.74e-11 64.3
MS.gene033443.t1 MTR_7g061010 28.125 352 168 15 1 313 15 320 4.81e-11 64.3
MS.gene033443.t1 MTR_3g024130 26.394 269 140 13 63 312 23 252 4.90e-11 63.5
MS.gene033443.t1 MTR_6g034830 36.207 116 60 3 2 114 14 118 5.75e-11 59.7
MS.gene033443.t1 MTR_1g071010 23.952 334 199 11 8 313 15 321 8.45e-11 63.5
MS.gene033443.t1 MTR_3g009300 27.187 320 159 15 11 318 37 294 9.14e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033443.t1 AT5G49610 29.129 333 189 13 8 325 9 309 3.03e-21 94.4
MS.gene033443.t1 AT4G12560 27.439 328 179 15 8 307 4 300 5.88e-21 94.0
MS.gene033443.t1 AT4G12560 27.439 328 179 15 8 307 4 300 5.88e-21 94.0
MS.gene033443.t1 AT4G12560 27.439 328 179 15 8 307 4 300 5.88e-21 94.0
MS.gene033443.t1 AT3G06240 27.896 423 214 19 5 372 33 419 1.06e-20 93.6
MS.gene033443.t1 AT4G22390 27.760 317 184 14 9 306 5 295 5.98e-20 90.9
MS.gene033443.t1 AT4G22390 27.760 317 184 14 9 306 5 295 8.23e-20 90.5
MS.gene033443.t1 AT3G23880 25.831 391 228 16 7 375 13 363 7.85e-16 78.6
MS.gene033443.t1 AT4G21240 24.625 333 193 14 8 321 36 329 9.07e-15 75.9
MS.gene033443.t1 AT1G33530 25.767 326 176 15 5 312 94 371 2.35e-14 74.7
MS.gene033443.t1 AT3G16590 30.492 305 166 18 7 296 4 277 2.69e-14 73.9
MS.gene033443.t1 AT3G21410 25.357 280 176 12 2 278 32 281 6.65e-12 67.0
MS.gene033443.t1 AT2G02030 24.606 317 200 13 4 298 35 334 7.87e-12 66.2
MS.gene033443.t1 AT5G62660 24.438 356 205 16 7 332 40 361 1.46e-11 65.9
MS.gene033443.t1 AT1G12170 24.198 343 202 11 6 326 4 310 4.96e-11 63.9
MS.gene033443.t1 AT3G08750 25.781 256 150 9 8 258 12 232 9.04e-11 63.2
MS.gene033443.t1 AT3G59610 26.333 300 172 12 8 297 8 268 9.36e-11 63.5

Find 79 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTATTGCCTATGATTTAA+AGG 0.152459 7.2:-25980660 MS.gene033443:CDS
TTATGATTTGTCGGTATTTC+GGG 0.165211 7.2:-25980576 MS.gene033443:CDS
AGATGATTACATGGTAGTTT+TGG 0.233203 7.2:-25980888 MS.gene033443:CDS
TTTATGATTTGTCGGTATTT+CGG 0.241268 7.2:-25980577 MS.gene033443:CDS
CTCGAATCTCGTCCTGAAAT+TGG 0.251260 7.2:-25981115 MS.gene033443:CDS
CTACAGGAACCTCCAATTTC+AGG 0.253184 7.2:+25981103 None:intergenic
TTCAATTTGCTCTATGGTTT+CGG 0.275699 7.2:-25980926 MS.gene033443:CDS
TGTCATTTCCTTTAAATCAT+AGG 0.293726 7.2:+25980652 None:intergenic
TCTTGAATGGTTCTATTCAT+TGG 0.308230 7.2:-25980715 MS.gene033443:CDS
GATCTTGTAGTCTTCGTATA+AGG 0.315835 7.2:+25980764 None:intergenic
GGCAATAATAACATCGCTTC+TGG 0.326605 7.2:+25980673 None:intergenic
CCACCATTTGTAAAGCATAC+TGG 0.332202 7.2:+25980428 None:intergenic
ACTGCCACTGTCATCGGAAT+TGG 0.354286 7.2:+25980982 None:intergenic
TACTGACATTTATGATTTGT+CGG 0.363718 7.2:-25980585 MS.gene033443:CDS
CTGCTACAATATCACACTTA+TGG 0.375959 7.2:-25980347 MS.gene033443:CDS
GAATTGGAGGCAATAGTTAA+AGG 0.380125 7.2:+25980998 None:intergenic
GAATGGTTCTATTCATTGGC+TGG 0.382596 7.2:-25980711 MS.gene033443:CDS
CTCTGTATACACTGCCAATT+GGG 0.382842 7.2:+25980304 None:intergenic
GGAAATTCTGTTGAAGTTGC+CGG 0.384137 7.2:-25981344 MS.gene033443:CDS
GTTACAGAGACTTCTATCTA+TGG 0.407945 7.2:-25981060 MS.gene033443:CDS
AGATGTCTACACTTAAGATA+TGG 0.412369 7.2:-25980529 MS.gene033443:CDS
TAAGCTTGCTCAATGCCATC+AGG 0.418945 7.2:+25980266 None:intergenic
TTCGGGGACTTATCAGTGTA+TGG 0.420938 7.2:-25980559 MS.gene033443:CDS
AATACGCAGTGGATTCATCT+TGG 0.434045 7.2:-25980496 MS.gene033443:CDS
CACCATTTGTAAAGCATACT+GGG 0.438337 7.2:+25980429 None:intergenic
CTCAAAGTGGTCCCAGAGTC+GGG 0.444830 7.2:-25980742 MS.gene033443:CDS
ACTCTGTATACACTGCCAAT+TGG 0.448336 7.2:+25980303 None:intergenic
AAATCGATATCGAAATCATC+TGG 0.448679 7.2:+25980611 None:intergenic
ATACTCTATAAACAAAAGTC+TGG 0.450762 7.2:+25981222 None:intergenic
AGAGTCGGGTCGTTCTTGAA+TGG 0.459947 7.2:-25980728 MS.gene033443:CDS
TGAAGACTCTTCTTCGCTGC+AGG 0.463115 7.2:-25981321 MS.gene033443:CDS
ATTCAAGAACGACCCGACTC+TGG 0.466756 7.2:+25980730 None:intergenic
ACAAATGGTGGTGATATTGT+TGG 0.467745 7.2:-25980416 MS.gene033443:CDS
TCCCCAGTATGCTTTACAAA+TGG 0.468448 7.2:-25980431 MS.gene033443:CDS
TCTCCCTCAAGAAGTGATAT+CGG 0.474579 7.2:-25981365 MS.gene033443:CDS
TTACTTTGCAAGATCCCAAT+TGG 0.477110 7.2:-25980318 MS.gene033443:CDS
GAAATGACAATGTCAGAGAT+TGG 0.479009 7.2:-25980638 MS.gene033443:CDS
TTTCCGATATCACTTCTTGA+GGG 0.484662 7.2:+25981362 None:intergenic
GCAAATTGAAAATACTGTAA+TGG 0.505146 7.2:+25980939 None:intergenic
GCCACTGTCATCGGAATTGG+AGG 0.506025 7.2:+25980985 None:intergenic
ATTGTTGGACCAGTTGCTGA+TGG 0.507743 7.2:-25980401 MS.gene033443:CDS
ATGCATTAAAATCTATCGAT+AGG 0.508348 7.2:+25981185 None:intergenic
GATGTCTACACTTAAGATAT+GGG 0.517647 7.2:-25980528 MS.gene033443:CDS
TACCGTAGGATTGAATTTGT+AGG 0.520997 7.2:+25980862 None:intergenic
GCAGGTCTGTGTGTAAGTTA+TGG 0.521738 7.2:-25981303 MS.gene033443:CDS
TTCAAGAACGACCCGACTCT+GGG 0.524772 7.2:+25980731 None:intergenic
TGCATTAAAATCTATCGATA+GGG 0.526127 7.2:+25981186 None:intergenic
GGTATGTTGTTCAATTGACT+TGG 0.526674 7.2:-25980843 MS.gene033443:CDS
CCAGTATGCTTTACAAATGG+TGG 0.534070 7.2:-25980428 MS.gene033443:CDS
TATAAACAGAAATCCTCTAC+AGG 0.537465 7.2:+25981087 None:intergenic
ATTTCCGATATCACTTCTTG+AGG 0.538048 7.2:+25981361 None:intergenic
ACTGCTACTGCCACTGTCAT+CGG 0.539657 7.2:+25980976 None:intergenic
TTGTTGGACCAGTTGCTGAT+GGG 0.547888 7.2:-25980400 MS.gene033443:CDS
CGTGTCAACAGATGATTACA+TGG 0.550607 7.2:-25980897 MS.gene033443:CDS
TTAGCAAAGCTTGATGATGA+AGG 0.551202 7.2:-25980374 MS.gene033443:CDS
GAAATTGGAGGTTCCTGTAG+AGG 0.555358 7.2:-25981100 MS.gene033443:CDS
GAATCTCGTCCTGAAATTGG+AGG 0.559526 7.2:-25981112 MS.gene033443:CDS
GTCCTACAAATTCAATCCTA+CGG 0.566267 7.2:-25980864 MS.gene033443:CDS
TCTCTGCTTTCACTCCCTGA+TGG 0.577136 7.2:-25980281 MS.gene033443:CDS
TGAAGTTGTAAAATGAGGAT+CGG 0.581187 7.2:+25981267 None:intergenic
CTCATTGAGAGCTAATGAGT+GGG 0.584146 7.2:-25980813 MS.gene033443:CDS
TCTCAAAGTGGTCCCAGAGT+CGG 0.587750 7.2:-25980743 MS.gene033443:CDS
TCTCATTGAGAGCTAATGAG+TGG 0.598081 7.2:-25980814 MS.gene033443:CDS
GCAATAGTTAAAGGAGACAG+AGG 0.605330 7.2:+25981007 None:intergenic
TGTTGGACCAGTTGCTGATG+GGG 0.607771 7.2:-25980399 MS.gene033443:CDS
GTTGGACCAGTTGCTGATGG+GGG 0.609659 7.2:-25980398 MS.gene033443:CDS
AAGCTTGCTCAATGCCATCA+GGG 0.614477 7.2:+25980267 None:intergenic
CAGCGAAGAAGAGTCTTCAC+CGG 0.614787 7.2:+25981325 None:intergenic
TGTTTGTGAACACGAGTGGA+TGG 0.615768 7.2:+25981034 None:intergenic
ACTTATCAGTGTATGGAATG+TGG 0.619206 7.2:-25980552 MS.gene033443:CDS
CTACAATATCACACTTATGG+TGG 0.619765 7.2:-25980344 MS.gene033443:CDS
TATGATTTGTCGGTATTTCG+GGG 0.643494 7.2:-25980575 MS.gene033443:CDS
TATTTGTTTGTGAACACGAG+TGG 0.650195 7.2:+25981030 None:intergenic
AAATGTGAAGTTGTAAAATG+AGG 0.653828 7.2:+25981262 None:intergenic
TCAATTGAACAACATACCGT+AGG 0.657645 7.2:+25980848 None:intergenic
AAGACTACAAGATCTCAAAG+TGG 0.673647 7.2:-25980755 MS.gene033443:CDS
GCCTCCAATTCCGATGACAG+TGG 0.690053 7.2:-25980986 MS.gene033443:CDS
ACCATTTGTAAAGCATACTG+GGG 0.719273 7.2:+25980430 None:intergenic
GGTGATGCAAGAATACGCAG+TGG 0.726589 7.2:-25980507 MS.gene033443:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTGCCTATGATTTAA+AGG - chr7.2:25980990-25981009 MS.gene033443:CDS 20.0%
! AAATGTGAAGTTGTAAAATG+AGG + chr7.2:25980391-25980410 None:intergenic 25.0%
! ATACTCTATAAACAAAAGTC+TGG + chr7.2:25980431-25980450 None:intergenic 25.0%
! ATGCATTAAAATCTATCGAT+AGG + chr7.2:25980468-25980487 None:intergenic 25.0%
! GCAAATTGAAAATACTGTAA+TGG + chr7.2:25980714-25980733 None:intergenic 25.0%
! TGCATTAAAATCTATCGATA+GGG + chr7.2:25980467-25980486 None:intergenic 25.0%
!! TACTGACATTTATGATTTGT+CGG - chr7.2:25981065-25981084 MS.gene033443:CDS 25.0%
!! TGTCATTTCCTTTAAATCAT+AGG + chr7.2:25981001-25981020 None:intergenic 25.0%
!! TTTATGATTTGTCGGTATTT+CGG - chr7.2:25981073-25981092 MS.gene033443:CDS 25.0%
!!! AGTATTTTCAATTTGCTCTA+TGG - chr7.2:25980718-25980737 MS.gene033443:CDS 25.0%
!!! TATCGATAGATTTTAATGCA+TGG - chr7.2:25980467-25980486 MS.gene033443:CDS 25.0%
AAATCGATATCGAAATCATC+TGG + chr7.2:25981042-25981061 None:intergenic 30.0%
AGATGTCTACACTTAAGATA+TGG - chr7.2:25981121-25981140 MS.gene033443:CDS 30.0%
GATGTCTACACTTAAGATAT+GGG - chr7.2:25981122-25981141 MS.gene033443:CDS 30.0%
TATAAACAGAAATCCTCTAC+AGG + chr7.2:25980566-25980585 None:intergenic 30.0%
TGAAGTTGTAAAATGAGGAT+CGG + chr7.2:25980386-25980405 None:intergenic 30.0%
! AGATGATTACATGGTAGTTT+TGG - chr7.2:25980762-25980781 MS.gene033443:CDS 30.0%
! GATGATTACATGGTAGTTTT+GGG - chr7.2:25980763-25980782 MS.gene033443:CDS 30.0%
! TCTTGAATGGTTCTATTCAT+TGG - chr7.2:25980935-25980954 MS.gene033443:CDS 30.0%
! TTATGATTTGTCGGTATTTC+GGG - chr7.2:25981074-25981093 MS.gene033443:CDS 30.0%
! TTCAATTTGCTCTATGGTTT+CGG - chr7.2:25980724-25980743 MS.gene033443:CDS 30.0%
!! ATGATTACATGGTAGTTTTG+GGG - chr7.2:25980764-25980783 MS.gene033443:CDS 30.0%
AAGACTACAAGATCTCAAAG+TGG - chr7.2:25980895-25980914 MS.gene033443:CDS 35.0%
ACCATTTGTAAAGCATACTG+GGG + chr7.2:25981223-25981242 None:intergenic 35.0%
ACTTATCAGTGTATGGAATG+TGG - chr7.2:25981098-25981117 MS.gene033443:CDS 35.0%
ATTTCCGATATCACTTCTTG+AGG + chr7.2:25980292-25980311 None:intergenic 35.0%
CACCATTTGTAAAGCATACT+GGG + chr7.2:25981224-25981243 None:intergenic 35.0%
CTACAATATCACACTTATGG+TGG - chr7.2:25981306-25981325 MS.gene033443:CDS 35.0%
CTGCTACAATATCACACTTA+TGG - chr7.2:25981303-25981322 MS.gene033443:CDS 35.0%
GAAATGACAATGTCAGAGAT+TGG - chr7.2:25981012-25981031 MS.gene033443:CDS 35.0%
GAATTGGAGGCAATAGTTAA+AGG + chr7.2:25980655-25980674 None:intergenic 35.0%
GATCTTGTAGTCTTCGTATA+AGG + chr7.2:25980889-25980908 None:intergenic 35.0%
GATTCGAGATGCAAAAAATC+AGG + chr7.2:25980523-25980542 None:intergenic 35.0%
GGTATGTTGTTCAATTGACT+TGG - chr7.2:25980807-25980826 MS.gene033443:CDS 35.0%
GTCCTACAAATTCAATCCTA+CGG - chr7.2:25980786-25980805 MS.gene033443:CDS 35.0%
GTTACAGAGACTTCTATCTA+TGG - chr7.2:25980590-25980609 MS.gene033443:CDS 35.0%
TACCGTAGGATTGAATTTGT+AGG + chr7.2:25980791-25980810 None:intergenic 35.0%
TATTTGTTTGTGAACACGAG+TGG + chr7.2:25980623-25980642 None:intergenic 35.0%
TCAATTGAACAACATACCGT+AGG + chr7.2:25980805-25980824 None:intergenic 35.0%
TTACTTTGCAAGATCCCAAT+TGG - chr7.2:25981332-25981351 MS.gene033443:CDS 35.0%
TTTCCGATATCACTTCTTGA+GGG + chr7.2:25980291-25980310 None:intergenic 35.0%
! ACAAATGGTGGTGATATTGT+TGG - chr7.2:25981234-25981253 MS.gene033443:CDS 35.0%
! TATGATTTGTCGGTATTTCG+GGG - chr7.2:25981075-25981094 MS.gene033443:CDS 35.0%
!! TTAGCAAAGCTTGATGATGA+AGG - chr7.2:25981276-25981295 MS.gene033443:CDS 35.0%
AAGCATACTGGGGAAAAATC+AGG + chr7.2:25981213-25981232 None:intergenic 40.0%
ACTCTGTATACACTGCCAAT+TGG + chr7.2:25981350-25981369 None:intergenic 40.0%
CCACCATTTGTAAAGCATAC+TGG + chr7.2:25981225-25981244 None:intergenic 40.0%
CCAGTATGCTTTACAAATGG+TGG - chr7.2:25981222-25981241 MS.gene033443:CDS 40.0%
CGTGTCAACAGATGATTACA+TGG - chr7.2:25980753-25980772 MS.gene033443:CDS 40.0%
CTCATTGAGAGCTAATGAGT+GGG - chr7.2:25980837-25980856 MS.gene033443:CDS 40.0%
CTCTGTATACACTGCCAATT+GGG + chr7.2:25981349-25981368 None:intergenic 40.0%
GCAATAGTTAAAGGAGACAG+AGG + chr7.2:25980646-25980665 None:intergenic 40.0%
GGAAATTCTGTTGAAGTTGC+CGG - chr7.2:25980306-25980325 MS.gene033443:CDS 40.0%
GGCAATAATAACATCGCTTC+TGG + chr7.2:25980980-25980999 None:intergenic 40.0%
TCCCCAGTATGCTTTACAAA+TGG - chr7.2:25981219-25981238 MS.gene033443:CDS 40.0%
TCTCATTGAGAGCTAATGAG+TGG - chr7.2:25980836-25980855 MS.gene033443:CDS 40.0%
TCTCCCTCAAGAAGTGATAT+CGG - chr7.2:25980285-25980304 MS.gene033443:CDS 40.0%
! AATACGCAGTGGATTCATCT+TGG - chr7.2:25981154-25981173 MS.gene033443:CDS 40.0%
! GAATGGTTCTATTCATTGGC+TGG - chr7.2:25980939-25980958 MS.gene033443:CDS 40.0%
ATTGTTGGACCAGTTGCTGA+TGG - chr7.2:25981249-25981268 MS.gene033443:CDS 45.0%
CTACAGGAACCTCCAATTTC+AGG + chr7.2:25980550-25980569 None:intergenic 45.0%
CTCGAATCTCGTCCTGAAAT+TGG - chr7.2:25980535-25980554 MS.gene033443:CDS 45.0%
GAAATTGGAGGTTCCTGTAG+AGG - chr7.2:25980550-25980569 MS.gene033443:CDS 45.0%
GAATCTCGTCCTGAAATTGG+AGG - chr7.2:25980538-25980557 MS.gene033443:CDS 45.0%
GCAGGTCTGTGTGTAAGTTA+TGG - chr7.2:25980347-25980366 MS.gene033443:CDS 45.0%
TGTTTGTGAACACGAGTGGA+TGG + chr7.2:25980619-25980638 None:intergenic 45.0%
TTCGGGGACTTATCAGTGTA+TGG - chr7.2:25981091-25981110 MS.gene033443:CDS 45.0%
TTGTTGGACCAGTTGCTGAT+GGG - chr7.2:25981250-25981269 MS.gene033443:CDS 45.0%
! AAGCTTGCTCAATGCCATCA+GGG + chr7.2:25981386-25981405 None:intergenic 45.0%
! TAAGCTTGCTCAATGCCATC+AGG + chr7.2:25981387-25981406 None:intergenic 45.0%
ACTGCCACTGTCATCGGAAT+TGG + chr7.2:25980671-25980690 None:intergenic 50.0%
ACTGCTACTGCCACTGTCAT+CGG + chr7.2:25980677-25980696 None:intergenic 50.0%
ACTGGGGAAAAATCAGGAGC+AGG + chr7.2:25981207-25981226 None:intergenic 50.0%
AGAGTCGGGTCGTTCTTGAA+TGG - chr7.2:25980922-25980941 MS.gene033443:CDS 50.0%
ATTCAAGAACGACCCGACTC+TGG + chr7.2:25980923-25980942 None:intergenic 50.0%
CAGCGAAGAAGAGTCTTCAC+CGG + chr7.2:25980328-25980347 None:intergenic 50.0%
GGTGATGCAAGAATACGCAG+TGG - chr7.2:25981143-25981162 MS.gene033443:CDS 50.0%
TCTCAAAGTGGTCCCAGAGT+CGG - chr7.2:25980907-25980926 MS.gene033443:CDS 50.0%
TCTCTGCTTTCACTCCCTGA+TGG - chr7.2:25981369-25981388 MS.gene033443:CDS 50.0%
TGAAGACTCTTCTTCGCTGC+AGG - chr7.2:25980329-25980348 MS.gene033443:CDS 50.0%
TGTTGGACCAGTTGCTGATG+GGG - chr7.2:25981251-25981270 MS.gene033443:CDS 50.0%
TTCAAGAACGACCCGACTCT+GGG + chr7.2:25980922-25980941 None:intergenic 50.0%
CTCAAAGTGGTCCCAGAGTC+GGG - chr7.2:25980908-25980927 MS.gene033443:CDS 55.0%
GCCACTGTCATCGGAATTGG+AGG + chr7.2:25980668-25980687 None:intergenic 55.0%
GCCTCCAATTCCGATGACAG+TGG - chr7.2:25980664-25980683 MS.gene033443:CDS 55.0%
GCTAATCCCCCATCAGCAAC+TGG + chr7.2:25981261-25981280 None:intergenic 55.0%
GTTGGACCAGTTGCTGATGG+GGG - chr7.2:25981252-25981271 MS.gene033443:CDS 55.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 25980265 25981407 25980265 ID=MS.gene033443
chr7.2 mRNA 25980265 25981407 25980265 ID=MS.gene033443.t1;Parent=MS.gene033443
chr7.2 exon 25980265 25981407 25980265 ID=MS.gene033443.t1.exon1;Parent=MS.gene033443.t1
chr7.2 CDS 25980265 25981407 25980265 ID=cds.MS.gene033443.t1;Parent=MS.gene033443.t1
Gene Sequence

>MS.gene033443

ATGGCGAAGAATAGTGTGCATCTCCCTCAAGAAGTGATATCGGAAATTCTGTTGAAGTTGCCGGTGAAGACTCTTCTTCGCTGCAGGTCTGTGTGTAAGTTATGGCTTTCTCTCATTTCCGATCCTCATTTTACAACTTCACATTTTCAACTTGCTTCATCAACCAGACTTTTGTTTATAGAGTATCGTGATTCTCAAACCCTATCGATAGATTTTAATGCATGGCTTGACGATGATTCTGCATTTTCATTAAGTCCTGATTTTTTGCATCTCGAATCTCGTCCTGAAATTGGAGGTTCCTGTAGAGGATTTCTGTTTATATACTGTTACAGAGACTTCTATCTATGGAATCCATCCACTCGTGTTCACAAACAAATACCTCTGTCTCCTTTAACTATTGCCTCCAATTCCGATGACAGTGGCAGTAGCAGTGACAGTGACAATGACCATTACAGTATTTTCAATTTGCTCTATGGTTTCGGATACGACGTGTCAACAGATGATTACATGGTAGTTTTGGGGTCCTACAAATTCAATCCTACGGTATGTTGTTCAATTGACTTGGAGATTTTCTCATTGAGAGCTAATGAGTGGGAAGAAATTGAGTTCGATTCTGATTTGCCTTATACGAAGACTACAAGATCTCAAAGTGGTCCCAGAGTCGGGTCGTTCTTGAATGGTTCTATTCATTGGCTGGTTTATAATTATGAGACCAGAAGCGATGTTATTATTGCCTATGATTTAAAGGAAATGACAATGTCAGAGATTGGTCTTCCAGATGATTTCGATATCGATTTTTCTACTGACATTTATGATTTGTCGGTATTTCGGGGACTTATCAGTGTATGGAATGTGGAGATGTCTACACTTAAGATATGGGTGATGCAAGAATACGCAGTGGATTCATCTTGGATTAAGACTCTTGATTTTAATTTTGAACCTGCTCCTGATTTTTCCCCAGTATGCTTTACAAATGGTGGTGATATTGTTGGACCAGTTGCTGATGGGGGATTAGCAAAGCTTGATGATGAAGGAGATCTGCTACAATATCACACTTATGGTGGCTGTTACTTTGCAAGATCCCAATTGGCAGTGTATACAGAGTCTCTGCTTTCACTCCCTGATGGCATTGAGCAAGCTTAA

Protein sequence

>MS.gene033443.t1

MAKNSVHLPQEVISEILLKLPVKTLLRCRSVCKLWLSLISDPHFTTSHFQLASSTRLLFIEYRDSQTLSIDFNAWLDDDSAFSLSPDFLHLESRPEIGGSCRGFLFIYCYRDFYLWNPSTRVHKQIPLSPLTIASNSDDSGSSSDSDNDHYSIFNLLYGFGYDVSTDDYMVVLGSYKFNPTVCCSIDLEIFSLRANEWEEIEFDSDLPYTKTTRSQSGPRVGSFLNGSIHWLVYNYETRSDVIIAYDLKEMTMSEIGLPDDFDIDFSTDIYDLSVFRGLISVWNVEMSTLKIWVMQEYAVDSSWIKTLDFNFEPAPDFSPVCFTNGGDIVGPVADGGLAKLDDEGDLLQYHTYGGCYFARSQLAVYTESLLSLPDGIEQA