Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059157.t1 | RHN76723.1 | 75.4 | 305 | 50 | 4 | 46 | 330 | 1 | 300 | 2.50E-125 | 459.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059157.t1 | Q9LPW2 | 23.6 | 373 | 208 | 15 | 12 | 330 | 40 | 389 | 1.1e-09 | 66.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059157.t1 | A0A396JKA9 | 75.4 | 305 | 50 | 4 | 46 | 330 | 1 | 300 | 1.8e-125 | 459.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059157.t1 | MTR_1g008000 | 62.951 | 305 | 47 | 5 | 46 | 330 | 1 | 259 | 4.38e-120 | 353 |
| MS.gene059157.t1 | MTR_1g008030 | 94.393 | 107 | 6 | 0 | 386 | 492 | 223 | 329 | 6.09e-62 | 205 |
| MS.gene059157.t1 | MTR_1g008030 | 93.617 | 47 | 3 | 0 | 330 | 376 | 6 | 52 | 1.81e-21 | 95.5 |
| MS.gene059157.t1 | MTR_1g037540 | 37.949 | 390 | 158 | 18 | 1 | 319 | 1 | 377 | 1.87e-56 | 193 |
| MS.gene059157.t1 | MTR_4g080200 | 37.853 | 354 | 176 | 14 | 5 | 330 | 3 | 340 | 3.20e-54 | 186 |
| MS.gene059157.t1 | MTR_1g023400 | 37.640 | 356 | 158 | 16 | 4 | 319 | 2 | 333 | 5.51e-46 | 164 |
| MS.gene059157.t1 | MTR_1g022200 | 37.669 | 369 | 166 | 18 | 4 | 330 | 14 | 360 | 1.11e-45 | 164 |
| MS.gene059157.t1 | MTR_1g009110 | 37.898 | 314 | 141 | 14 | 3 | 273 | 12 | 314 | 1.22e-39 | 147 |
| MS.gene059157.t1 | MTR_1g022105 | 35.211 | 284 | 143 | 14 | 4 | 273 | 20 | 276 | 5.68e-27 | 111 |
| MS.gene059157.t1 | MTR_1g023430 | 42.105 | 133 | 67 | 5 | 201 | 330 | 38 | 163 | 4.56e-19 | 85.1 |
| MS.gene059157.t1 | MTR_3g036430 | 26.148 | 283 | 167 | 11 | 4 | 272 | 19 | 273 | 1.95e-15 | 77.8 |
| MS.gene059157.t1 | MTR_6g089990 | 38.136 | 118 | 57 | 2 | 4 | 120 | 54 | 156 | 3.72e-14 | 72.4 |
| MS.gene059157.t1 | MTR_3g104020 | 52.055 | 73 | 34 | 1 | 413 | 484 | 293 | 365 | 6.95e-14 | 73.9 |
| MS.gene059157.t1 | MTR_7g013590 | 26.639 | 244 | 143 | 6 | 8 | 223 | 39 | 274 | 7.79e-14 | 73.6 |
| MS.gene059157.t1 | MTR_7g016930 | 25.623 | 281 | 162 | 12 | 7 | 250 | 18 | 288 | 2.41e-13 | 71.6 |
| MS.gene059157.t1 | MTR_6g090010 | 57.692 | 52 | 22 | 0 | 4 | 55 | 54 | 105 | 8.16e-13 | 67.0 |
| MS.gene059157.t1 | MTR_0620s0010 | 65.116 | 43 | 15 | 0 | 4 | 46 | 5 | 47 | 9.23e-13 | 63.5 |
| MS.gene059157.t1 | MTR_6g065980 | 24.749 | 299 | 160 | 13 | 8 | 272 | 19 | 286 | 9.38e-13 | 70.1 |
| MS.gene059157.t1 | MTR_1g024125 | 40.336 | 119 | 61 | 6 | 208 | 322 | 38 | 150 | 3.93e-12 | 64.7 |
| MS.gene059157.t1 | MTR_5g046300 | 23.692 | 325 | 186 | 13 | 8 | 295 | 7 | 306 | 5.51e-12 | 67.4 |
| MS.gene059157.t1 | MTR_5g046290 | 23.692 | 325 | 186 | 13 | 8 | 295 | 7 | 306 | 5.51e-12 | 67.4 |
| MS.gene059157.t1 | MTR_4g109290 | 35.606 | 132 | 73 | 4 | 8 | 134 | 12 | 136 | 8.90e-12 | 64.3 |
| MS.gene059157.t1 | MTR_6g089910 | 65.116 | 43 | 15 | 0 | 4 | 46 | 54 | 96 | 1.66e-11 | 61.2 |
| MS.gene059157.t1 | MTR_0831s0010 | 24.790 | 238 | 126 | 11 | 7 | 201 | 52 | 279 | 3.44e-11 | 65.5 |
| MS.gene059157.t1 | MTR_8g032390 | 27.304 | 293 | 172 | 12 | 5 | 277 | 40 | 311 | 3.78e-11 | 65.1 |
| MS.gene059157.t1 | MTR_6g004700 | 48.387 | 93 | 41 | 5 | 384 | 474 | 234 | 321 | 4.02e-11 | 64.7 |
| MS.gene059157.t1 | MTR_0115s0020 | 25.449 | 334 | 170 | 16 | 3 | 273 | 8 | 325 | 7.59e-11 | 64.3 |
| MS.gene059157.t1 | MTR_4g133170 | 24.272 | 309 | 172 | 14 | 5 | 273 | 4 | 290 | 8.59e-11 | 64.3 |
| MS.gene059157.t1 | MTR_7g090810 | 27.556 | 225 | 132 | 9 | 67 | 277 | 139 | 346 | 9.56e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059157.t1 | AT3G16210 | 27.236 | 246 | 134 | 8 | 1 | 224 | 1 | 223 | 1.45e-12 | 69.3 |
| MS.gene059157.t1 | AT1G47790 | 22.973 | 296 | 170 | 12 | 8 | 269 | 28 | 299 | 6.62e-11 | 64.7 |
Find 104 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTCTAATCTCATTAAT+TGG | 0.178899 | 1.2:-11637180 | None:intergenic |
| AAACAAGTTGTTGATATTAT+TGG | 0.182570 | 1.2:-11640015 | None:intergenic |
| GGTGTTTATCATTGGCTTAT+AGG | 0.230766 | 1.2:+11636994 | MS.gene059157:CDS |
| CAATTAATGAGATTAGAATT+TGG | 0.234969 | 1.2:+11637181 | MS.gene059157:CDS |
| AATACATGGTGGAATGTATT+TGG | 0.251370 | 1.2:-11640888 | None:intergenic |
| TAAGAGTCTAGGAGAAGATT+TGG | 0.251986 | 1.2:+11636329 | MS.gene059157:CDS |
| ATGTACAATACTCTTGTTAA+TGG | 0.263447 | 1.2:+11636973 | MS.gene059157:CDS |
| GACGAAGCATTTATTAGTTT+TGG | 0.264089 | 1.2:+11636763 | MS.gene059157:CDS |
| TTGTTAGATTACATTGAAAT+TGG | 0.271300 | 1.2:-11637374 | None:intergenic |
| AACAAGTTGTTGATATTATT+GGG | 0.275056 | 1.2:-11640014 | None:intergenic |
| CATGTGTCTCTTAACGAAAT+AGG | 0.285013 | 1.2:-11636439 | None:intergenic |
| AATTAATGAGATTAGAATTT+GGG | 0.326552 | 1.2:+11637182 | MS.gene059157:CDS |
| TTGCGAAAACATCACCAATA+TGG | 0.348430 | 1.2:-11641118 | None:intergenic |
| ATATCTTCATTAGATCTTGT+TGG | 0.350920 | 1.2:-11637326 | None:intergenic |
| CCAGTGCTTGGATTGTAGTT+TGG | 0.360109 | 1.2:-11640821 | None:intergenic |
| TTTGACGACTTTGAATTCAT+TGG | 0.369013 | 1.2:-11636800 | None:intergenic |
| CATGATATCGCGGAGATTAA+CGG | 0.370428 | 1.2:+11637117 | MS.gene059157:CDS |
| GACAATGTCATAAGAAGGTT+GGG | 0.376207 | 1.2:-11636728 | None:intergenic |
| CAGATACTAGTGAGGCTTCC+GGG | 0.384250 | 1.2:+11636357 | MS.gene059157:CDS |
| TTGTTAATGGTGTTTATCAT+TGG | 0.389185 | 1.2:+11636986 | MS.gene059157:CDS |
| TATATTACTCTGATCCATAT+TGG | 0.401340 | 1.2:+11641104 | MS.gene059157:CDS |
| GAGGGACAGGTAAAGGGATA+AGG | 0.405900 | 1.2:-11636909 | None:intergenic |
| ATGTGTCTCTTAACGAAATA+GGG | 0.416506 | 1.2:-11636438 | None:intergenic |
| AGCATCTTTGACCTCTTGTT+CGG | 0.417719 | 1.2:-11640930 | None:intergenic |
| CAGAGACACCTTCAAGGATC+AGG | 0.420291 | 1.2:-11640133 | None:intergenic |
| ACAGATACTAGTGAGGCTTC+CGG | 0.420446 | 1.2:+11636356 | MS.gene059157:CDS |
| CTACAATCCAAGCACTGGTT+TGG | 0.420663 | 1.2:+11640826 | MS.gene059157:CDS |
| AAATCGTGATCATCATGGTT+GGG | 0.422524 | 1.2:-11637018 | None:intergenic |
| ATTCCATGGGGATGAGGATA+AGG | 0.428588 | 1.2:-11640060 | None:intergenic |
| TTCAATACCCTGATCCTTGA+AGG | 0.432208 | 1.2:+11640125 | MS.gene059157:CDS |
| ATCGTCCTGTACGCTGGTCT+CGG | 0.432823 | 1.2:+11636833 | MS.gene059157:CDS |
| TTTCTGTTTGCAAGACTGTA+TGG | 0.438229 | 1.2:+11636642 | MS.gene059157:intron |
| GGTTAAAGATCAACAAGGTT+GGG | 0.438242 | 1.2:+11637203 | MS.gene059157:CDS |
| GACTTGTAAGCAGCAAAATT+AGG | 0.445169 | 1.2:-11640992 | None:intergenic |
| TCTGAAGGAGGGACAGGTAA+AGG | 0.449238 | 1.2:-11636916 | None:intergenic |
| GACTTTGAATTCATTGGTGT+TGG | 0.451574 | 1.2:-11636794 | None:intergenic |
| ATTGAACGCATTCTTTCAAA+GGG | 0.454335 | 1.2:+11637270 | MS.gene059157:CDS |
| ACTTTGAATTCATTGGTGTT+GGG | 0.458427 | 1.2:-11636793 | None:intergenic |
| TATTGAACGCATTCTTTCAA+AGG | 0.464379 | 1.2:+11637269 | MS.gene059157:CDS |
| CTTGTTGGAACATTCTATCA+AGG | 0.472063 | 1.2:-11637311 | None:intergenic |
| CGACAATGTCATAAGAAGGT+TGG | 0.488384 | 1.2:-11636729 | None:intergenic |
| AGGGACAGGTAAAGGGATAA+GGG | 0.489666 | 1.2:-11636908 | None:intergenic |
| AAGAAGATGGACCTCTCTAA+TGG | 0.492276 | 1.2:-11636704 | None:intergenic |
| ATTGCTTCAGAGGGATTCCA+TGG | 0.493472 | 1.2:-11640074 | None:intergenic |
| CTGAAGGAGGGACAGGTAAA+GGG | 0.497818 | 1.2:-11636915 | None:intergenic |
| TGGAAAGGACTATATCGAAC+TGG | 0.498828 | 1.2:-11637093 | None:intergenic |
| TTGGAGCTTGATTGCTTCAG+AGG | 0.500463 | 1.2:-11640084 | None:intergenic |
| GGGTTAAAGATCAACAAGGT+TGG | 0.505393 | 1.2:+11637202 | MS.gene059157:CDS |
| GATGGACCTCTCTAATGGTT+GGG | 0.509330 | 1.2:-11636699 | None:intergenic |
| TGGAGCTTGATTGCTTCAGA+GGG | 0.510506 | 1.2:-11640083 | None:intergenic |
| AAGAAGGTTGGGGAAGAAGA+TGG | 0.514921 | 1.2:-11636717 | None:intergenic |
| ATAATCATAGCACTAAATCA+TGG | 0.517780 | 1.2:+11636884 | MS.gene059157:CDS |
| ATAGAAACCAAACCAGTGCT+TGG | 0.519521 | 1.2:-11640833 | None:intergenic |
| AGATGGACCTCTCTAATGGT+TGG | 0.521206 | 1.2:-11636700 | None:intergenic |
| AGAGGGATTCCATGGGGATG+AGG | 0.528929 | 1.2:-11640066 | None:intergenic |
| GAATGCGTTCAATATCAAAT+CGG | 0.530755 | 1.2:-11637260 | None:intergenic |
| ACGCATTCTTTCAAAGGGGA+AGG | 0.532718 | 1.2:+11637275 | MS.gene059157:CDS |
| CGTTAAGAGACACATGCAGA+TGG | 0.533125 | 1.2:+11636446 | MS.gene059157:CDS |
| ATATGTCAGAGACACCTTCA+AGG | 0.537741 | 1.2:-11640139 | None:intergenic |
| ATAGTTTCTGAAGGAGGGAC+AGG | 0.537807 | 1.2:-11636922 | None:intergenic |
| CTAGACCGAGACCAGCGTAC+AGG | 0.545109 | 1.2:-11636838 | None:intergenic |
| TGTTAAAATCGTGATCATCA+TGG | 0.545146 | 1.2:-11637023 | None:intergenic |
| ATTCATAGAGGGCATCACCT+TGG | 0.547277 | 1.2:-11640103 | None:intergenic |
| AAAATCGTGATCATCATGGT+TGG | 0.549224 | 1.2:-11637019 | None:intergenic |
| ATTTCGATTAACATAAGCAA+GGG | 0.557921 | 1.2:-11637142 | None:intergenic |
| AATCGTGATCATCATGGTTG+GGG | 0.560502 | 1.2:-11637017 | None:intergenic |
| TAATTTAGTCACCGAACAAG+AGG | 0.569663 | 1.2:+11640919 | MS.gene059157:CDS |
| TCTACGACAATGTCATAAGA+AGG | 0.569668 | 1.2:-11636733 | None:intergenic |
| CTACCTTATCCTCATCCCCA+TGG | 0.572708 | 1.2:+11640057 | MS.gene059157:CDS |
| CCAAACTACAATCCAAGCAC+TGG | 0.584563 | 1.2:+11640821 | MS.gene059157:CDS |
| GTTAAGAGACACATGCAGAT+GGG | 0.585040 | 1.2:+11636447 | MS.gene059157:CDS |
| TAATCTCCGCGATATCATGA+TGG | 0.585641 | 1.2:-11637113 | None:intergenic |
| TCAGGGTATTGAATTCATAG+AGG | 0.589008 | 1.2:-11640115 | None:intergenic |
| TTGCTTCAGAGGGATTCCAT+GGG | 0.590202 | 1.2:-11640073 | None:intergenic |
| TATATGATAGTTTCTGAAGG+AGG | 0.592536 | 1.2:-11636928 | None:intergenic |
| GTATCCATCGTCCTGTACGC+TGG | 0.592741 | 1.2:+11636827 | MS.gene059157:CDS |
| GTAATCTAACAAGTGATCTG+TGG | 0.599441 | 1.2:+11637385 | MS.gene059157:CDS |
| ATATGATAGTTTCTGAAGGA+GGG | 0.602960 | 1.2:-11636927 | None:intergenic |
| ATGGAAAGATCATGAGGAGA+CGG | 0.604445 | 1.2:-11636485 | None:intergenic |
| AGAGACACCTTCAAGGATCA+GGG | 0.609072 | 1.2:-11640132 | None:intergenic |
| TGCTAGATGGAAAGATCATG+AGG | 0.612845 | 1.2:-11636491 | None:intergenic |
| GTGGAACCCAACCATTAGAG+AGG | 0.613504 | 1.2:+11636693 | MS.gene059157:CDS |
| AATTTCGATTAACATAAGCA+AGG | 0.613905 | 1.2:-11637143 | None:intergenic |
| TGTAAGCAGCAAAATTAGGT+CGG | 0.614664 | 1.2:-11640988 | None:intergenic |
| TCCGCGATATCATGATGGAA+AGG | 0.614688 | 1.2:-11637108 | None:intergenic |
| TCAGAAACTATCATATATCA+CGG | 0.615345 | 1.2:+11636934 | MS.gene059157:CDS |
| CAGGGTATTGAATTCATAGA+GGG | 0.616003 | 1.2:-11640114 | None:intergenic |
| GAGACCAGCGTACAGGACGA+TGG | 0.621218 | 1.2:-11636831 | None:intergenic |
| TCCTTTCCATCATGATATCG+CGG | 0.629162 | 1.2:+11637107 | MS.gene059157:CDS |
| TCTGAAGCAATCAAGCTCCA+AGG | 0.633685 | 1.2:+11640086 | MS.gene059157:CDS |
| AAATTAAGAGCAGAAATACA+TGG | 0.637870 | 1.2:-11640902 | None:intergenic |
| ATGTTAAGAAGAAGATGTGT+TGG | 0.638988 | 1.2:+11639969 | MS.gene059157:intron |
| TGATATATGATAGTTTCTGA+AGG | 0.639815 | 1.2:-11636931 | None:intergenic |
| ACAATGTCATAAGAAGGTTG+GGG | 0.640082 | 1.2:-11636727 | None:intergenic |
| GTAGTTGAAACTGATTCGTG+TGG | 0.653741 | 1.2:-11637062 | None:intergenic |
| GCAGCTGTGATGATAAAAGC+TGG | 0.655687 | 1.2:+11640962 | MS.gene059157:CDS |
| TCAAATGCGTACAACAATCG+TGG | 0.656751 | 1.2:+11636397 | MS.gene059157:CDS |
| ATTTGGGTTAAAGATCAACA+AGG | 0.669261 | 1.2:+11637198 | MS.gene059157:CDS |
| TGGAGATACAGATACTAGTG+AGG | 0.677466 | 1.2:+11636349 | MS.gene059157:CDS |
| TGCTTCAGAGGGATTCCATG+GGG | 0.687164 | 1.2:-11640072 | None:intergenic |
| GTAGAAACAAAAGCACGATG+AGG | 0.691532 | 1.2:-11640038 | None:intergenic |
| ATTAATAAACTATACAAACG+TGG | 0.697840 | 1.2:+11641019 | MS.gene059157:CDS |
| TTGAACGCATTCTTTCAAAG+GGG | 0.725587 | 1.2:+11637271 | MS.gene059157:CDS |
| TTAAGAGCAGAAATACATGG+TGG | 0.725915 | 1.2:-11640899 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGAATAAAAAAATTCAATA+AGG | - | chr1.2:11639655-11639674 | None:intergenic | 10.0% |
| !!! | AATTTTCTCTTATAAAATTT+TGG | + | chr1.2:11639932-11639951 | MS.gene059157:intron | 10.0% |
| !!! | ATATATGCTTTATTATTTTT+TGG | + | chr1.2:11637509-11637528 | MS.gene059157:intron | 10.0% |
| !! | AATTAATGAGATTAGAATTT+GGG | + | chr1.2:11637182-11637201 | MS.gene059157:CDS | 15.0% |
| !! | TTAGAAAATAATAACTATCA+CGG | - | chr1.2:11640496-11640515 | None:intergenic | 15.0% |
| !!! | AAAAAAAAATCCTTTGAAAA+AGG | + | chr1.2:11639834-11639853 | MS.gene059157:intron | 15.0% |
| !!! | ATGTTTTGTATGAAATTTTT+GGG | + | chr1.2:11637954-11637973 | MS.gene059157:intron | 15.0% |
| !!! | ATTTTAGTTTTTTTCTTTAG+AGG | + | chr1.2:11637472-11637491 | MS.gene059157:intron | 15.0% |
| !!! | TATAAGAGAAAATTGTTTTA+GGG | - | chr1.2:11639926-11639945 | None:intergenic | 15.0% |
| !!! | TATGTTTTGTATGAAATTTT+TGG | + | chr1.2:11637953-11637972 | MS.gene059157:intron | 15.0% |
| !!! | TTATAAGAGAAAATTGTTTT+AGG | - | chr1.2:11639927-11639946 | None:intergenic | 15.0% |
| !! | AAACAAGTTGTTGATATTAT+TGG | - | chr1.2:11640018-11640037 | None:intergenic | 20.0% |
| !! | AACAAGTTGTTGATATTATT+GGG | - | chr1.2:11640017-11640036 | None:intergenic | 20.0% |
| !! | ATGTTATGATTGTTAACATT+GGG | + | chr1.2:11637780-11637799 | MS.gene059157:intron | 20.0% |
| !! | ATTAATAAACTATACAAACG+TGG | + | chr1.2:11641019-11641038 | MS.gene059157:CDS | 20.0% |
| !! | ATTCATTATAAAAAACGAAC+TGG | + | chr1.2:11638383-11638402 | MS.gene059157:intron | 20.0% |
| !! | CAAATTCTAATCTCATTAAT+TGG | - | chr1.2:11637183-11637202 | None:intergenic | 20.0% |
| !! | CAATTAATGAGATTAGAATT+TGG | + | chr1.2:11637181-11637200 | MS.gene059157:CDS | 20.0% |
| !! | CATTTCAGAATATAAATCAT+AGG | - | chr1.2:11640687-11640706 | None:intergenic | 20.0% |
| !! | TATGTTATGATTGTTAACAT+TGG | + | chr1.2:11637779-11637798 | MS.gene059157:intron | 20.0% |
| !! | TTAAAAGGTTTATGTCAAAT+AGG | + | chr1.2:11640410-11640429 | MS.gene059157:intron | 20.0% |
| !! | TTGTAAAACATATTTCCTAT+TGG | - | chr1.2:11636580-11636599 | None:intergenic | 20.0% |
| !! | TTGTTAGATTACATTGAAAT+TGG | - | chr1.2:11637377-11637396 | None:intergenic | 20.0% |
| !!! | ACTTTGAATCATCTTTTAAA+AGG | + | chr1.2:11640395-11640414 | MS.gene059157:intron | 20.0% |
| !!! | AGTTAAAGTGTTTTAAATTG+TGG | + | chr1.2:11637749-11637768 | MS.gene059157:intron | 20.0% |
| !!! | ATGGTTTTAAATTACATTTG+TGG | + | chr1.2:11638038-11638057 | MS.gene059157:intron | 20.0% |
| !!! | TATAGTTTACAGTTGATTTA+TGG | + | chr1.2:11638019-11638038 | MS.gene059157:intron | 20.0% |
| !!! | TTTCTTATTTATACACAAAC+CGG | + | chr1.2:11637567-11637586 | MS.gene059157:intron | 20.0% |
| !!! | TTTTAAAAGATGATTCAAAG+TGG | - | chr1.2:11640396-11640415 | None:intergenic | 20.0% |
| ! | AAAAAACTAAAATCATGTCC+CGG | - | chr1.2:11637465-11637484 | None:intergenic | 25.0% |
| ! | AAAAATGAAGTTGTATCTAC+TGG | + | chr1.2:11638790-11638809 | MS.gene059157:intron | 25.0% |
| ! | AAAATAATACATATGTACCC+CGG | - | chr1.2:11637589-11637608 | None:intergenic | 25.0% |
| ! | AAATTAAGAGCAGAAATACA+TGG | - | chr1.2:11640905-11640924 | None:intergenic | 25.0% |
| ! | AATATATTTCCTTTGTAGGT+TGG | + | chr1.2:11638409-11638428 | MS.gene059157:intron | 25.0% |
| ! | AATGAATGAGCTATTTAAAG+TGG | - | chr1.2:11638370-11638389 | None:intergenic | 25.0% |
| ! | AATTCATAAGGTGAATAAGT+GGG | - | chr1.2:11639792-11639811 | None:intergenic | 25.0% |
| ! | AATTTCGATTAACATAAGCA+AGG | - | chr1.2:11637146-11637165 | None:intergenic | 25.0% |
| ! | ACAATGCATTATTATATGCA+GGG | + | chr1.2:11639744-11639763 | MS.gene059157:intron | 25.0% |
| ! | ATAATCATAGCACTAAATCA+TGG | + | chr1.2:11636884-11636903 | MS.gene059157:CDS | 25.0% |
| ! | ATATCTTCATTAGATCTTGT+TGG | - | chr1.2:11637329-11637348 | None:intergenic | 25.0% |
| ! | ATGTACAATACTCTTGTTAA+TGG | + | chr1.2:11636973-11636992 | MS.gene059157:CDS | 25.0% |
| ! | ATTTCGATTAACATAAGCAA+GGG | - | chr1.2:11637145-11637164 | None:intergenic | 25.0% |
| ! | GAGTAATATATTTCCTTTGT+AGG | + | chr1.2:11638405-11638424 | MS.gene059157:intron | 25.0% |
| ! | TACAATGCATTATTATATGC+AGG | + | chr1.2:11639743-11639762 | MS.gene059157:intron | 25.0% |
| ! | TATATTACTCTGATCCATAT+TGG | + | chr1.2:11641104-11641123 | MS.gene059157:CDS | 25.0% |
| ! | TCAGAAACTATCATATATCA+CGG | + | chr1.2:11636934-11636953 | MS.gene059157:CDS | 25.0% |
| ! | TCTTCCTATCCTATTATAAT+TGG | + | chr1.2:11639898-11639917 | MS.gene059157:intron | 25.0% |
| ! | TGATATATGATAGTTTCTGA+AGG | - | chr1.2:11636934-11636953 | None:intergenic | 25.0% |
| ! | TTGTTAATGGTGTTTATCAT+TGG | + | chr1.2:11636986-11637005 | MS.gene059157:CDS | 25.0% |
| ! | TTTAGGGAACCAATTATAAT+AGG | - | chr1.2:11639910-11639929 | None:intergenic | 25.0% |
| !! | AAAAAATCCTTTGAAAAAGG+TGG | + | chr1.2:11639837-11639856 | MS.gene059157:intron | 25.0% |
| !! | AGTTATTATTTTCTAATCCG+TGG | + | chr1.2:11640500-11640519 | MS.gene059157:intron | 25.0% |
| !! | ATCCTTATTTCCATATCTTA+CGG | + | chr1.2:11638254-11638273 | MS.gene059157:intron | 25.0% |
| !! | ATGAATGAGCTATTTAAAGT+GGG | - | chr1.2:11638369-11638388 | None:intergenic | 25.0% |
| !! | TTCTTATTTATACACAAACC+GGG | + | chr1.2:11637568-11637587 | MS.gene059157:intron | 25.0% |
| !!! | AATATTTCCACCTTTTTCAA+AGG | - | chr1.2:11639847-11639866 | None:intergenic | 25.0% |
| AAAGAAGAACACAAGAGAAT+TGG | - | chr1.2:11638545-11638564 | None:intergenic | 30.0% | |
| ACATCATGTATGAGGTAAAA+AGG | + | chr1.2:11638906-11638925 | MS.gene059157:intron | 30.0% | |
| ACATTGGATTAACATTGCAA+AGG | + | chr1.2:11637926-11637945 | MS.gene059157:intron | 30.0% | |
| ATGTGTCTCTTAACGAAATA+GGG | - | chr1.2:11636441-11636460 | None:intergenic | 30.0% | |
| ATGTTAAGAAGAAGATGTGT+TGG | + | chr1.2:11639969-11639988 | MS.gene059157:intron | 30.0% | |
| ATTAACCAAGTATGAATGTC+TGG | - | chr1.2:11640278-11640297 | None:intergenic | 30.0% | |
| ATTCATAAGGTGAATAAGTG+GGG | - | chr1.2:11639791-11639810 | None:intergenic | 30.0% | |
| ATTGAACGCATTCTTTCAAA+GGG | + | chr1.2:11637270-11637289 | MS.gene059157:CDS | 30.0% | |
| CATCATGTATGAGGTAAAAA+GGG | + | chr1.2:11638907-11638926 | MS.gene059157:intron | 30.0% | |
| CCATATGAAAAGATTCTAAG+TGG | - | chr1.2:11636607-11636626 | None:intergenic | 30.0% | |
| GAATGCGTTCAATATCAAAT+CGG | - | chr1.2:11637263-11637282 | None:intergenic | 30.0% | |
| GAATTCATAAGGTGAATAAG+TGG | - | chr1.2:11639793-11639812 | None:intergenic | 30.0% | |
| GGAACCAATTATAATAGGAT+AGG | - | chr1.2:11639905-11639924 | None:intergenic | 30.0% | |
| GTAAGATATGGAAATAAGGA+TGG | - | chr1.2:11638255-11638274 | None:intergenic | 30.0% | |
| GTCAGTTTAAACAAGCAATT+TGG | + | chr1.2:11640777-11640796 | MS.gene059157:intron | 30.0% | |
| GTTGAACAAAGTGAAGAATA+GGG | - | chr1.2:11640214-11640233 | None:intergenic | 30.0% | |
| TACAAGTACTAGAATTTCAG+AGG | + | chr1.2:11638682-11638701 | MS.gene059157:intron | 30.0% | |
| TACCATTACATCATACTCAA+GGG | + | chr1.2:11640458-11640477 | MS.gene059157:intron | 30.0% | |
| TATTGAACGCATTCTTTCAA+AGG | + | chr1.2:11637269-11637288 | MS.gene059157:CDS | 30.0% | |
| TCTTCACTTTGTTCAACAAT+TGG | + | chr1.2:11640217-11640236 | MS.gene059157:intron | 30.0% | |
| TGCAGAAATAGTTGAAAGAT+TGG | - | chr1.2:11638442-11638461 | None:intergenic | 30.0% | |
| TGTTAAAATCGTGATCATCA+TGG | - | chr1.2:11637026-11637045 | None:intergenic | 30.0% | |
| TGTTGAACAAAGTGAAGAAT+AGG | - | chr1.2:11640215-11640234 | None:intergenic | 30.0% | |
| TTACCATTACATCATACTCA+AGG | + | chr1.2:11640457-11640476 | MS.gene059157:intron | 30.0% | |
| TTCCTATTGGATTTAGTGTT+GGG | - | chr1.2:11636567-11636586 | None:intergenic | 30.0% | |
| TTGTAATCTAATAGACCTCT+AGG | + | chr1.2:11638194-11638213 | MS.gene059157:intron | 30.0% | |
| TTTCCTATTGGATTTAGTGT+TGG | - | chr1.2:11636568-11636587 | None:intergenic | 30.0% | |
| TTTGACGACTTTGAATTCAT+TGG | - | chr1.2:11636803-11636822 | None:intergenic | 30.0% | |
| ! | AATACATGGTGGAATGTATT+TGG | - | chr1.2:11640891-11640910 | None:intergenic | 30.0% |
| ! | AATTTGGTTCGATAGAGAAT+TGG | + | chr1.2:11640793-11640812 | MS.gene059157:intron | 30.0% |
| ! | ACTTTGAATTCATTGGTGTT+GGG | - | chr1.2:11636796-11636815 | None:intergenic | 30.0% |
| ! | ATATGATAGTTTCTGAAGGA+GGG | - | chr1.2:11636930-11636949 | None:intergenic | 30.0% |
| ! | ATTTGGGTTAAAGATCAACA+AGG | + | chr1.2:11637198-11637217 | MS.gene059157:CDS | 30.0% |
| ! | CCACTTAGAATCTTTTCATA+TGG | + | chr1.2:11636604-11636623 | MS.gene059157:intron | 30.0% |
| ! | TATATGATAGTTTCTGAAGG+AGG | - | chr1.2:11636931-11636950 | None:intergenic | 30.0% |
| ! | TCTGAAATTCTAGTACTTGT+AGG | - | chr1.2:11638683-11638702 | None:intergenic | 30.0% |
| ! | TCTTATTTATACACAAACCG+GGG | + | chr1.2:11637569-11637588 | MS.gene059157:intron | 30.0% |
| ! | TTCAAGACGACTTAATTTTG+TGG | + | chr1.2:11636674-11636693 | MS.gene059157:CDS | 30.0% |
| ! | TTTTCATATGGTCATTGCAA+TGG | + | chr1.2:11636616-11636635 | MS.gene059157:intron | 30.0% |
| ! | TTTTCTTCATGTATGCTAGA+TGG | - | chr1.2:11636507-11636526 | None:intergenic | 30.0% |
| ! | TTTTTCCAGACATTCATACT+TGG | + | chr1.2:11640270-11640289 | MS.gene059157:intron | 30.0% |
| !! | AGTGTTTTAAATTGTGGTTG+CGG | + | chr1.2:11637755-11637774 | MS.gene059157:intron | 30.0% |
| !! | GACGAAGCATTTATTAGTTT+TGG | + | chr1.2:11636763-11636782 | MS.gene059157:CDS | 30.0% |
| !! | GAGAAAATCAGGTTTGATTT+TGG | - | chr1.2:11640720-11640739 | None:intergenic | 30.0% |
| !! | TAATTTTGCTGCTTACAAGT+CGG | + | chr1.2:11640994-11641013 | MS.gene059157:CDS | 30.0% |
| !!! | CAAAGGATTTTTTTTTCGTC+AGG | - | chr1.2:11639830-11639849 | None:intergenic | 30.0% |
| !!! | CTAGCGTATGAAAGATTTTT+TGG | + | chr1.2:11639672-11639691 | MS.gene059157:intron | 30.0% |
| AAAATCGTGATCATCATGGT+TGG | - | chr1.2:11637022-11637041 | None:intergenic | 35.0% | |
| AAACATGAAGCATATTGTCG+TGG | - | chr1.2:11640253-11640272 | None:intergenic | 35.0% | |
| AAATCGTGATCATCATGGTT+GGG | - | chr1.2:11637021-11637040 | None:intergenic | 35.0% | |
| AACATGAAGCATATTGTCGT+GGG | - | chr1.2:11640252-11640271 | None:intergenic | 35.0% | |
| AACCCAACACTAAATCCAAT+AGG | + | chr1.2:11636562-11636581 | MS.gene059157:intron | 35.0% | |
| AACCCTTGAGTATGATGTAA+TGG | - | chr1.2:11640463-11640482 | None:intergenic | 35.0% | |
| AACGTAATTACGACACAAAC+CGG | + | chr1.2:11637443-11637462 | MS.gene059157:intron | 35.0% | |
| AAGTTGTATCTACTGGAAAG+AGG | + | chr1.2:11638797-11638816 | MS.gene059157:intron | 35.0% | |
| AATTGTCTCTCCTATGGTAA+AGG | + | chr1.2:11637888-11637907 | MS.gene059157:intron | 35.0% | |
| ACAATGTCATAAGAAGGTTG+GGG | - | chr1.2:11636730-11636749 | None:intergenic | 35.0% | |
| ACCACAAATTCAAGGATTGT+TGG | - | chr1.2:11637854-11637873 | None:intergenic | 35.0% | |
| AGATATCACAATCGCAATTG+CGG | - | chr1.2:11638113-11638132 | None:intergenic | 35.0% | |
| AGTTGAGCAGATTGCAAAAA+CGG | + | chr1.2:11641045-11641064 | MS.gene059157:CDS | 35.0% | |
| ATGCCAAGACTATACAAAAC+TGG | - | chr1.2:11638480-11638499 | None:intergenic | 35.0% | |
| CATGTGTCTCTTAACGAAAT+AGG | - | chr1.2:11636442-11636461 | None:intergenic | 35.0% | |
| CCACAAATTCAAGGATTGTT+GGG | - | chr1.2:11637853-11637872 | None:intergenic | 35.0% | |
| CCTAGTAGCTAGAATTCATA+AGG | - | chr1.2:11639804-11639823 | None:intergenic | 35.0% | |
| CTCACAAAAATTGTTGAGGT+AGG | - | chr1.2:11639226-11639245 | None:intergenic | 35.0% | |
| CTCCGTAAGATATGGAAATA+AGG | - | chr1.2:11638259-11638278 | None:intergenic | 35.0% | |
| CTGCAAGTTATAGTTCCATA+AGG | + | chr1.2:11638297-11638316 | MS.gene059157:intron | 35.0% | |
| CTTGTTGGAACATTCTATCA+AGG | - | chr1.2:11637314-11637333 | None:intergenic | 35.0% | |
| GACAATGGTTACATTCCTTA+TGG | - | chr1.2:11638315-11638334 | None:intergenic | 35.0% | |
| GACAATGTCATAAGAAGGTT+GGG | - | chr1.2:11636731-11636750 | None:intergenic | 35.0% | |
| GACATATTGCGTGAAAGAAA+AGG | - | chr1.2:11637998-11638017 | None:intergenic | 35.0% | |
| GACTTGTAAGCAGCAAAATT+AGG | - | chr1.2:11640995-11641014 | None:intergenic | 35.0% | |
| GACTTTGAATTCATTGGTGT+TGG | - | chr1.2:11636797-11636816 | None:intergenic | 35.0% | |
| GAGAAATGAATCGTACGTTA+GGG | - | chr1.2:11639560-11639579 | None:intergenic | 35.0% | |
| GAGAAGAGGTAGTTTAACAT+TGG | + | chr1.2:11637910-11637929 | MS.gene059157:intron | 35.0% | |
| GAGTTTCTCAAACACTAGAA+AGG | + | chr1.2:11638881-11638900 | MS.gene059157:intron | 35.0% | |
| GCAATTTCACCACAAATTCA+AGG | - | chr1.2:11637862-11637881 | None:intergenic | 35.0% | |
| GGTTAAAGATCAACAAGGTT+GGG | + | chr1.2:11637203-11637222 | MS.gene059157:CDS | 35.0% | |
| GTAATCTAACAAGTGATCTG+TGG | + | chr1.2:11637385-11637404 | MS.gene059157:CDS | 35.0% | |
| GTTACGTACTGCAACATAAT+TGG | + | chr1.2:11638155-11638174 | MS.gene059157:intron | 35.0% | |
| TAAGAGTCTAGGAGAAGATT+TGG | + | chr1.2:11636329-11636348 | MS.gene059157:CDS | 35.0% | |
| TAATTTAGTCACCGAACAAG+AGG | + | chr1.2:11640919-11640938 | MS.gene059157:CDS | 35.0% | |
| TACTTCTCTCAACAACTGTA+TGG | - | chr1.2:11640558-11640577 | None:intergenic | 35.0% | |
| TATGACACTATATGATGTCC+AGG | - | chr1.2:11638627-11638646 | None:intergenic | 35.0% | |
| TATTGTCGTACATGTTATCC+TGG | + | chr1.2:11638606-11638625 | MS.gene059157:intron | 35.0% | |
| TCTACGACAATGTCATAAGA+AGG | - | chr1.2:11636736-11636755 | None:intergenic | 35.0% | |
| TCTATTAGATTACAAGCTGC+TGG | - | chr1.2:11638189-11638208 | None:intergenic | 35.0% | |
| TGACAATGTGTGAGAAAATC+AGG | - | chr1.2:11640731-11640750 | None:intergenic | 35.0% | |
| TGAGAAATGAATCGTACGTT+AGG | - | chr1.2:11639561-11639580 | None:intergenic | 35.0% | |
| TGCGGTAATTGCATTTATTG+AGG | + | chr1.2:11638068-11638087 | MS.gene059157:intron | 35.0% | |
| TGGAAATAAGGATGGATCAA+AGG | - | chr1.2:11638247-11638266 | None:intergenic | 35.0% | |
| TGTAAGCAGCAAAATTAGGT+CGG | - | chr1.2:11640991-11641010 | None:intergenic | 35.0% | |
| TGTCGTAATTACGTTGACAA+GGG | - | chr1.2:11637438-11637457 | None:intergenic | 35.0% | |
| TTAAGAGCAGAAATACATGG+TGG | - | chr1.2:11640902-11640921 | None:intergenic | 35.0% | |
| TTCTCTTCCTTTCTCAATCT+AGG | + | chr1.2:11640179-11640198 | MS.gene059157:intron | 35.0% | |
| TTGAACGCATTCTTTCAAAG+GGG | + | chr1.2:11637271-11637290 | MS.gene059157:CDS | 35.0% | |
| TTGATGTTACCAGAAGACAA+TGG | - | chr1.2:11638330-11638349 | None:intergenic | 35.0% | |
| TTGCGATTGTGATATCTTTG+CGG | + | chr1.2:11638116-11638135 | MS.gene059157:intron | 35.0% | |
| TTGCGGATATCTCTATATTG+CGG | + | chr1.2:11638133-11638152 | MS.gene059157:intron | 35.0% | |
| TTTCTGTTTGCAAGACTGTA+TGG | + | chr1.2:11636642-11636661 | MS.gene059157:intron | 35.0% | |
| ! | AAACGCAACAATGATTTTCC+CGG | - | chr1.2:11636378-11636397 | None:intergenic | 35.0% |
| ! | ACATCATACTCAAGGGTTTT+CGG | + | chr1.2:11640465-11640484 | MS.gene059157:intron | 35.0% |
| ! | ATCTACTGGAAAGAGGTTTT+CGG | + | chr1.2:11638804-11638823 | MS.gene059157:intron | 35.0% |
| ! | CCTTATGAATTCTAGCTACT+AGG | + | chr1.2:11639801-11639820 | MS.gene059157:intron | 35.0% |
| ! | CTACCTCAACAATTTTTGTG+AGG | + | chr1.2:11639224-11639243 | MS.gene059157:intron | 35.0% |
| ! | GGTATTTTACCAACCTACAA+AGG | - | chr1.2:11638421-11638440 | None:intergenic | 35.0% |
| !! | AACCGATTTTCACAAAGCAA+TGG | + | chr1.2:11638832-11638851 | MS.gene059157:intron | 35.0% |
| !! | ACCGATTTTCACAAAGCAAT+GGG | + | chr1.2:11638833-11638852 | MS.gene059157:intron | 35.0% |
| !! | CAGGGTATTGAATTCATAGA+GGG | - | chr1.2:11640117-11640136 | None:intergenic | 35.0% |
| !! | CTTCCAGTTTTGTATAGTCT+TGG | + | chr1.2:11638474-11638493 | MS.gene059157:intron | 35.0% |
| !! | GGTGTTTATCATTGGCTTAT+AGG | + | chr1.2:11636994-11637013 | MS.gene059157:CDS | 35.0% |
| !! | TCAGGGTATTGAATTCATAG+AGG | - | chr1.2:11640118-11640137 | None:intergenic | 35.0% |
| !! | TGATTCAAAGTGGAAGTACT+AGG | - | chr1.2:11640386-11640405 | None:intergenic | 35.0% |
| !!! | TGATTTTCTAGAGCCTATGA+GGG | - | chr1.2:11638947-11638966 | None:intergenic | 35.0% |
| !!! | TTGATTTTCTAGAGCCTATG+AGG | - | chr1.2:11638948-11638967 | None:intergenic | 35.0% |
| AAACGAACAACCCAGATTGA+AGG | + | chr1.2:11638966-11638985 | MS.gene059157:intron | 40.0% | |
| AAAGAAGTTGTGCAAGTCTG+AGG | + | chr1.2:11638757-11638776 | MS.gene059157:intron | 40.0% | |
| AACCACAATTGTCTCTCCTA+TGG | + | chr1.2:11637882-11637901 | MS.gene059157:intron | 40.0% | |
| AAGAAGATGGACCTCTCTAA+TGG | - | chr1.2:11636707-11636726 | None:intergenic | 40.0% | |
| AATCGTGATCATCATGGTTG+GGG | - | chr1.2:11637020-11637039 | None:intergenic | 40.0% | |
| ACACATTGTCATCTCCTCTA+TGG | + | chr1.2:11640740-11640759 | MS.gene059157:intron | 40.0% | |
| ACGTAATTACGACACAAACC+GGG | + | chr1.2:11637444-11637463 | MS.gene059157:intron | 40.0% | |
| AGAAACTCGTTGAGGGATAT+GGG | - | chr1.2:11638869-11638888 | None:intergenic | 40.0% | |
| AGCATCTTTGACCTCTTGTT+CGG | - | chr1.2:11640933-11640952 | None:intergenic | 40.0% | |
| AGTGTTTGAGAAACTCGTTG+AGG | - | chr1.2:11638877-11638896 | None:intergenic | 40.0% | |
| ATAAAGATGACAACGGCTTG+GGG | + | chr1.2:11639300-11639319 | MS.gene059157:intron | 40.0% | |
| ATAGAAACCAAACCAGTGCT+TGG | - | chr1.2:11640836-11640855 | None:intergenic | 40.0% | |
| ATATGTCAGAGACACCTTCA+AGG | - | chr1.2:11640142-11640161 | None:intergenic | 40.0% | |
| ATATGTTCTACGTGATGTCC+TGG | - | chr1.2:11638658-11638677 | None:intergenic | 40.0% | |
| ATGGAAAGATCATGAGGAGA+CGG | - | chr1.2:11636488-11636507 | None:intergenic | 40.0% | |
| CAAAAGGTCCATTCTTTCCT+TGG | - | chr1.2:11638715-11638734 | None:intergenic | 40.0% | |
| CAAAGGATCTTCTTTGTGGT+TGG | - | chr1.2:11638230-11638249 | None:intergenic | 40.0% | |
| CAACAATGCAATAGCCATAG+AGG | - | chr1.2:11640757-11640776 | None:intergenic | 40.0% | |
| CATAAAGATGACAACGGCTT+GGG | + | chr1.2:11639299-11639318 | MS.gene059157:intron | 40.0% | |
| CATGATATCGCGGAGATTAA+CGG | + | chr1.2:11637117-11637136 | MS.gene059157:CDS | 40.0% | |
| CCCAACAATCCTTGAATTTG+TGG | + | chr1.2:11637850-11637869 | MS.gene059157:intron | 40.0% | |
| CCTCTTGAAGTAGTCACAAA+AGG | - | chr1.2:11638731-11638750 | None:intergenic | 40.0% | |
| CGACAATGTCATAAGAAGGT+TGG | - | chr1.2:11636732-11636751 | None:intergenic | 40.0% | |
| CGCTATAACGACATAAACCA+CGG | - | chr1.2:11640520-11640539 | None:intergenic | 40.0% | |
| CGTAACAAAATCATCGACAC+CGG | + | chr1.2:11640353-11640372 | MS.gene059157:intron | 40.0% | |
| CGTGGTTTATGTCGTTATAG+CGG | + | chr1.2:11640518-11640537 | MS.gene059157:intron | 40.0% | |
| CTATGCACACAGGATTTCAA+TGG | - | chr1.2:11639711-11639730 | None:intergenic | 40.0% | |
| CTCTATGGCTATTGCATTGT+TGG | + | chr1.2:11640755-11640774 | MS.gene059157:intron | 40.0% | |
| CTGAAGGCTTCTTCATTCAA+AGG | - | chr1.2:11639251-11639270 | None:intergenic | 40.0% | |
| GAAAGGCAACATCATGTATG+AGG | + | chr1.2:11638898-11638917 | MS.gene059157:intron | 40.0% | |
| GCCCATTGCTTTGTGAAAAT+CGG | - | chr1.2:11638837-11638856 | None:intergenic | 40.0% | |
| GCTTCTTCTTCATTTCGTGT+TGG | - | chr1.2:11639204-11639223 | None:intergenic | 40.0% | |
| GGAATGTAACCATTGTCTTC+TGG | + | chr1.2:11638318-11638337 | MS.gene059157:intron | 40.0% | |
| GGATCAAAGGATCTTCTTTG+TGG | - | chr1.2:11638234-11638253 | None:intergenic | 40.0% | |
| GGGTTAAAGATCAACAAGGT+TGG | + | chr1.2:11637202-11637221 | MS.gene059157:CDS | 40.0% | |
| GGTCCTCACAAAAATTGTTG+AGG | - | chr1.2:11639230-11639249 | None:intergenic | 40.0% | |
| GTGTCGTAATTACGTTGACA+AGG | - | chr1.2:11637439-11637458 | None:intergenic | 40.0% | |
| GTGTTTGAGAAACTCGTTGA+GGG | - | chr1.2:11638876-11638895 | None:intergenic | 40.0% | |
| GTTAAGAGACACATGCAGAT+GGG | + | chr1.2:11636447-11636466 | MS.gene059157:CDS | 40.0% | |
| TAATCTCCGCGATATCATGA+TGG | - | chr1.2:11637116-11637135 | None:intergenic | 40.0% | |
| TACATTTGTGGTCGAGATTG+CGG | + | chr1.2:11638050-11638069 | MS.gene059157:intron | 40.0% | |
| TACCATAGGAGAGACAATTG+TGG | - | chr1.2:11637887-11637906 | None:intergenic | 40.0% | |
| TACCTCTTCTCCTTTACCAT+AGG | - | chr1.2:11637901-11637920 | None:intergenic | 40.0% | |
| TAGTGTCATACATGTTGTCC+AGG | + | chr1.2:11638637-11638656 | MS.gene059157:intron | 40.0% | |
| TCAAATGCGTACAACAATCG+TGG | + | chr1.2:11636397-11636416 | MS.gene059157:CDS | 40.0% | |
| TCAAGTCAGTGTAGGAAATG+AGG | - | chr1.2:11639603-11639622 | None:intergenic | 40.0% | |
| TCCATTCTTTCCTTGGAAGA+CGG | - | chr1.2:11638708-11638727 | None:intergenic | 40.0% | |
| TCCTTTCCATCATGATATCG+CGG | + | chr1.2:11637107-11637126 | MS.gene059157:CDS | 40.0% | |
| TCTTCATTTCGTGTTGGATC+CGG | - | chr1.2:11639198-11639217 | None:intergenic | 40.0% | |
| TCTTGTTCAGTGTCAATCTG+TGG | - | chr1.2:11640593-11640612 | None:intergenic | 40.0% | |
| TGAGTACGTTTCGTTATTCG+AGG | - | chr1.2:11639026-11639045 | None:intergenic | 40.0% | |
| TGCATTATTATATGCAGGGC+CGG | + | chr1.2:11639748-11639767 | MS.gene059157:intron | 40.0% | |
| TGCTAGATGGAAAGATCATG+AGG | - | chr1.2:11636494-11636513 | None:intergenic | 40.0% | |
| TGGAAAGGACTATATCGAAC+TGG | - | chr1.2:11637096-11637115 | None:intergenic | 40.0% | |
| TGGAGATACAGATACTAGTG+AGG | + | chr1.2:11636349-11636368 | MS.gene059157:CDS | 40.0% | |
| TGGAGGCAGTTAGCAATAAA+TGG | - | chr1.2:11639155-11639174 | None:intergenic | 40.0% | |
| TTCAATACCCTGATCCTTGA+AGG | + | chr1.2:11640125-11640144 | MS.gene059157:CDS | 40.0% | |
| TTGCGCCATAAAGATGACAA+CGG | + | chr1.2:11639293-11639312 | MS.gene059157:intron | 40.0% | |
| TTGTCATCTTTATGGCGCAA+TGG | - | chr1.2:11639293-11639312 | None:intergenic | 40.0% | |
| TTTGGTCCATGTGTCTTCAT+GGG | - | chr1.2:11639357-11639376 | None:intergenic | 40.0% | |
| ! | AGTCACCCTTTTATAGGAGA+AGG | - | chr1.2:11639529-11639548 | None:intergenic | 40.0% |
| ! | ATGCTGAGTCACCCTTTTAT+AGG | - | chr1.2:11639535-11639554 | None:intergenic | 40.0% |
| ! | CCTTTTGTGACTACTTCAAG+AGG | + | chr1.2:11638728-11638747 | MS.gene059157:intron | 40.0% |
| ! | GTAGAAACAAAAGCACGATG+AGG | - | chr1.2:11640041-11640060 | None:intergenic | 40.0% |
| ! | TAGTGTTGGGTTGTCATGTA+CGG | - | chr1.2:11636554-11636573 | None:intergenic | 40.0% |
| !! | ACTTCTGGTTTCCTTCAATC+TGG | - | chr1.2:11638980-11638999 | None:intergenic | 40.0% |
| !! | CTTCTGGTTTCCTTCAATCT+GGG | - | chr1.2:11638979-11638998 | None:intergenic | 40.0% |
| !! | GTAGTTGAAACTGATTCGTG+TGG | - | chr1.2:11637065-11637084 | None:intergenic | 40.0% |
| !!! | ATTTTCTAGAGCCTATGAGG+GGG | - | chr1.2:11638945-11638964 | None:intergenic | 40.0% |
| !!! | CGGTGTCGATGATTTTGTTA+CGG | - | chr1.2:11640355-11640374 | None:intergenic | 40.0% |
| !!! | GATTTTCTAGAGCCTATGAG+GGG | - | chr1.2:11638946-11638965 | None:intergenic | 40.0% |
| AACCAGAAGTCACGATCCAA+TGG | + | chr1.2:11638990-11639009 | MS.gene059157:intron | 45.0% | |
| AAGAAGGTTGGGGAAGAAGA+TGG | - | chr1.2:11636720-11636739 | None:intergenic | 45.0% | |
| ACAGATACTAGTGAGGCTTC+CGG | + | chr1.2:11636356-11636375 | MS.gene059157:CDS | 45.0% | |
| ACGCATTCTTTCAAAGGGGA+AGG | + | chr1.2:11637275-11637294 | MS.gene059157:CDS | 45.0% | |
| AGAGACACCTTCAAGGATCA+GGG | - | chr1.2:11640135-11640154 | None:intergenic | 45.0% | |
| AGATGGACCTCTCTAATGGT+TGG | - | chr1.2:11636703-11636722 | None:intergenic | 45.0% | |
| AGGGACAGGTAAAGGGATAA+GGG | - | chr1.2:11636911-11636930 | None:intergenic | 45.0% | |
| ATTCCATGGGGATGAGGATA+AGG | - | chr1.2:11640063-11640082 | None:intergenic | 45.0% | |
| ATTGCTTCAGAGGGATTCCA+TGG | - | chr1.2:11640077-11640096 | None:intergenic | 45.0% | |
| CATGGGATTGACGTTCTAAC+AGG | - | chr1.2:11639340-11639359 | None:intergenic | 45.0% | |
| CATTATTATATGCAGGGCCG+GGG | + | chr1.2:11639750-11639769 | MS.gene059157:intron | 45.0% | |
| CCAAACTACAATCCAAGCAC+TGG | + | chr1.2:11640821-11640840 | MS.gene059157:CDS | 45.0% | |
| CCAAGCCGTTGTCATCTTTA+TGG | - | chr1.2:11639301-11639320 | None:intergenic | 45.0% | |
| CCAGTGCTTGGATTGTAGTT+TGG | - | chr1.2:11640824-11640843 | None:intergenic | 45.0% | |
| CCATAAAGATGACAACGGCT+TGG | + | chr1.2:11639298-11639317 | MS.gene059157:intron | 45.0% | |
| CGTTAAGAGACACATGCAGA+TGG | + | chr1.2:11636446-11636465 | MS.gene059157:CDS | 45.0% | |
| CTCCTATGGTAAAGGAGAAG+AGG | + | chr1.2:11637896-11637915 | MS.gene059157:intron | 45.0% | |
| GAGAAACTCGTTGAGGGATA+TGG | - | chr1.2:11638870-11638889 | None:intergenic | 45.0% | |
| GATGGACCTCTCTAATGGTT+GGG | - | chr1.2:11636702-11636721 | None:intergenic | 45.0% | |
| GCAGCTGTGATGATAAAAGC+TGG | + | chr1.2:11640962-11640981 | MS.gene059157:CDS | 45.0% | |
| GCATGAATGCCTCTAGATGT+AGG | + | chr1.2:11638496-11638515 | MS.gene059157:intron | 45.0% | |
| GCATTATTATATGCAGGGCC+GGG | + | chr1.2:11639749-11639768 | MS.gene059157:intron | 45.0% | |
| GTAGCTGCCTAGATTGAGAA+AGG | - | chr1.2:11640189-11640208 | None:intergenic | 45.0% | |
| GTCAATCCCATGAAGACACA+TGG | + | chr1.2:11639348-11639367 | MS.gene059157:intron | 45.0% | |
| GTTTGGTCCATGTGTCTTCA+TGG | - | chr1.2:11639358-11639377 | None:intergenic | 45.0% | |
| TCCAACACTCAAGTCAGTGT+AGG | - | chr1.2:11639611-11639630 | None:intergenic | 45.0% | |
| TCGCGCCTTCTCCTATAAAA+GGG | + | chr1.2:11639521-11639540 | MS.gene059157:intron | 45.0% | |
| TGAGCAGATTGCAAAAACGG+TGG | + | chr1.2:11641048-11641067 | MS.gene059157:CDS | 45.0% | |
| TGGAGCTTGATTGCTTCAGA+GGG | - | chr1.2:11640086-11640105 | None:intergenic | 45.0% | |
| TTGCTTCAGAGGGATTCCAT+GGG | - | chr1.2:11640076-11640095 | None:intergenic | 45.0% | |
| TTGGAGCTTGATTGCTTCAG+AGG | - | chr1.2:11640087-11640106 | None:intergenic | 45.0% | |
| TTTCCACACGTAACCATCGT+GGG | - | chr1.2:11639090-11639109 | None:intergenic | 45.0% | |
| ! | ATAGTTTCTGAAGGAGGGAC+AGG | - | chr1.2:11636925-11636944 | None:intergenic | 45.0% |
| ! | CATACTCAAGGGTTTTCGGT+TGG | + | chr1.2:11640469-11640488 | MS.gene059157:intron | 45.0% |
| ! | TAAAGATGACAACGGCTTGG+GGG | + | chr1.2:11639301-11639320 | MS.gene059157:intron | 45.0% |
| ! | TCACAAAGCAATGGGCTTTG+AGG | + | chr1.2:11638841-11638860 | MS.gene059157:intron | 45.0% |
| ! | TCCGCGATATCATGATGGAA+AGG | - | chr1.2:11637111-11637130 | None:intergenic | 45.0% |
| ! | TCTGAAGCAATCAAGCTCCA+AGG | + | chr1.2:11640086-11640105 | MS.gene059157:CDS | 45.0% |
| ! | TGGAGTGTTAACATGTCTGC+AGG | + | chr1.2:11639627-11639646 | MS.gene059157:intron | 45.0% |
| ! | TTTTCCACACGTAACCATCG+TGG | - | chr1.2:11639091-11639110 | None:intergenic | 45.0% |
| !! | AATGTGTGTGGTGTTGCTGA+AGG | - | chr1.2:11639267-11639286 | None:intergenic | 45.0% |
| !! | ACGTTGTGTCTTGTTTCGAG+GGG | - | chr1.2:11639380-11639399 | None:intergenic | 45.0% |
| !! | ATTCATAGAGGGCATCACCT+TGG | - | chr1.2:11640106-11640125 | None:intergenic | 45.0% |
| !! | CTACAATCCAAGCACTGGTT+TGG | + | chr1.2:11640826-11640845 | MS.gene059157:CDS | 45.0% |
| !! | GACGTTGTGTCTTGTTTCGA+GGG | - | chr1.2:11639381-11639400 | None:intergenic | 45.0% |
| !! | GGAAGTACTAGGATGATGAC+CGG | - | chr1.2:11640375-11640394 | None:intergenic | 45.0% |
| !! | TCCTACACTGACTTGAGTGT+TGG | + | chr1.2:11639607-11639626 | MS.gene059157:intron | 45.0% |
| !!! | TTTTCTAGAGCCTATGAGGG+GGG | - | chr1.2:11638944-11638963 | None:intergenic | 45.0% |
| !! | AAAAAATAATAATTAGAAAT+TGG | - | chr1.2:11637637-11637656 | None:intergenic | 5.0% |
| !! | AAAAATAATAATTAGAAATT+GGG | - | chr1.2:11637636-11637655 | None:intergenic | 5.0% |
| ACCAACTGAGCTATGCACAC+AGG | - | chr1.2:11639721-11639740 | None:intergenic | 50.0% | |
| AGCCATTGGATCGTGACTTC+TGG | - | chr1.2:11638995-11639014 | None:intergenic | 50.0% | |
| AGGTGACGTTGCACTGAACT+AGG | + | chr1.2:11638516-11638535 | MS.gene059157:intron | 50.0% | |
| AGTTGTGCAAGTCTGAGGAG+TGG | + | chr1.2:11638762-11638781 | MS.gene059157:intron | 50.0% | |
| ATTTCAGAGGCCGTCTTCCA+AGG | + | chr1.2:11638695-11638714 | MS.gene059157:intron | 50.0% | |
| CACGCTCTCTCCGTAAGATA+TGG | - | chr1.2:11638267-11638286 | None:intergenic | 50.0% | |
| CAGAGACACCTTCAAGGATC+AGG | - | chr1.2:11640136-11640155 | None:intergenic | 50.0% | |
| CAGATACTAGTGAGGCTTCC+GGG | + | chr1.2:11636357-11636376 | MS.gene059157:CDS | 50.0% | |
| CTACCTTATCCTCATCCCCA+TGG | + | chr1.2:11640057-11640076 | MS.gene059157:CDS | 50.0% | |
| CTGAAGGAGGGACAGGTAAA+GGG | - | chr1.2:11636918-11636937 | None:intergenic | 50.0% | |
| GAAGTCACGATCCAATGGCT+TGG | + | chr1.2:11638995-11639014 | MS.gene059157:intron | 50.0% | |
| GAGGGACAGGTAAAGGGATA+AGG | - | chr1.2:11636912-11636931 | None:intergenic | 50.0% | |
| GCAACGTCACCTACATCTAG+AGG | - | chr1.2:11638508-11638527 | None:intergenic | 50.0% | |
| GCCGTCTTCCAAGGAAAGAA+TGG | + | chr1.2:11638704-11638723 | MS.gene059157:intron | 50.0% | |
| GCGCAATGGCTTAATGTGTG+TGG | - | chr1.2:11639279-11639298 | None:intergenic | 50.0% | |
| GTCGCGCCTTCTCCTATAAA+AGG | + | chr1.2:11639520-11639539 | MS.gene059157:intron | 50.0% | |
| GTGGAACCCAACCATTAGAG+AGG | + | chr1.2:11636693-11636712 | MS.gene059157:CDS | 50.0% | |
| GTTGGATTGCTAGAGCCTAG+AGG | - | chr1.2:11638212-11638231 | None:intergenic | 50.0% | |
| TCATTTCGTGTTGGATCCGG+TGG | - | chr1.2:11639195-11639214 | None:intergenic | 50.0% | |
| TCCTGTGTGCATAGCTCAGT+TGG | + | chr1.2:11639717-11639736 | MS.gene059157:intron | 50.0% | |
| TCTGAAGGAGGGACAGGTAA+AGG | - | chr1.2:11636919-11636938 | None:intergenic | 50.0% | |
| TGCTTCAGAGGGATTCCATG+GGG | - | chr1.2:11640075-11640094 | None:intergenic | 50.0% | |
| TGGAGCTAATGTGCTTGCTC+AGG | - | chr1.2:11639403-11639422 | None:intergenic | 50.0% | |
| TTCCACACGTAACCATCGTG+GGG | - | chr1.2:11639089-11639108 | None:intergenic | 50.0% | |
| ! | AGGTGAATAAGTGGGGTGTC+CGG | - | chr1.2:11639784-11639803 | None:intergenic | 50.0% |
| ! | CACGATCCAATGGCTTGGAA+TGG | + | chr1.2:11639000-11639019 | MS.gene059157:intron | 50.0% |
| ! | CTGGAAAGAGGTTTTCGGCT+AGG | + | chr1.2:11638809-11638828 | MS.gene059157:intron | 50.0% |
| ! | TTTATAGGAGAAGGCGCGAC+CGG | - | chr1.2:11639520-11639539 | None:intergenic | 50.0% |
| !! | GGACGTTGTGTCTTGTTTCG+AGG | - | chr1.2:11639382-11639401 | None:intergenic | 50.0% |
| !! | GTGTCTTGTTTCGAGGGGTT+TGG | - | chr1.2:11639375-11639394 | None:intergenic | 50.0% |
| AGAAATGCGGCGCCTCATCA+GGG | - | chr1.2:11639491-11639510 | None:intergenic | 55.0% | |
| AGAGGGATTCCATGGGGATG+AGG | - | chr1.2:11640069-11640088 | None:intergenic | 55.0% | |
| ATGTACGGTGCATGCAGGAC+GGG | - | chr1.2:11639453-11639472 | None:intergenic | 55.0% | |
| CATGTACGGTGCATGCAGGA+CGG | - | chr1.2:11639454-11639473 | None:intergenic | 55.0% | |
| GTATCCATCGTCCTGTACGC+TGG | + | chr1.2:11636827-11636846 | MS.gene059157:CDS | 55.0% | |
| TAGAAATGCGGCGCCTCATC+AGG | - | chr1.2:11639492-11639511 | None:intergenic | 55.0% | |
| TCCTGCATGCACCGTACATG+TGG | + | chr1.2:11639454-11639473 | MS.gene059157:intron | 55.0% | |
| TCGAGGCCATTCCAAGCCAT+TGG | - | chr1.2:11639009-11639028 | None:intergenic | 55.0% | |
| TTTCGTGTTGGATCCGGTGG+CGG | - | chr1.2:11639192-11639211 | None:intergenic | 55.0% | |
| ! | ATCGTCCTGTACGCTGGTCT+CGG | + | chr1.2:11636833-11636852 | MS.gene059157:CDS | 55.0% |
| ! | CGACCGGTTCCCTAGAAATG+CGG | - | chr1.2:11639504-11639523 | None:intergenic | 55.0% |
| ! | GGTGAATAAGTGGGGTGTCC+GGG | - | chr1.2:11639783-11639802 | None:intergenic | 55.0% |
| ! | GTGAATAAGTGGGGTGTCCG+GGG | - | chr1.2:11639782-11639801 | None:intergenic | 55.0% |
| !! | GATGAGGCGCCGCATTTCTA+GGG | + | chr1.2:11639492-11639511 | MS.gene059157:intron | 55.0% |
| !! | TGATGAGGCGCCGCATTTCT+AGG | + | chr1.2:11639491-11639510 | MS.gene059157:intron | 55.0% |
| AAATGCGGCGCCTCATCAGG+GGG | - | chr1.2:11639489-11639508 | None:intergenic | 60.0% | |
| CACCCCACGATGGTTACGTG+TGG | + | chr1.2:11639084-11639103 | MS.gene059157:intron | 60.0% | |
| CGGCATGAAGTGGTGAGTGG+AGG | - | chr1.2:11639172-11639191 | None:intergenic | 60.0% | |
| CTAGACCGAGACCAGCGTAC+AGG | - | chr1.2:11636841-11636860 | None:intergenic | 60.0% | |
| CTAGAGCCTATGAGGGGGGA+GGG | - | chr1.2:11638940-11638959 | None:intergenic | 60.0% | |
| GAAATGCGGCGCCTCATCAG+GGG | - | chr1.2:11639490-11639509 | None:intergenic | 60.0% | |
| GAGACCAGCGTACAGGACGA+TGG | - | chr1.2:11636834-11636853 | None:intergenic | 60.0% | |
| GCCACATGTACGGTGCATGC+AGG | - | chr1.2:11639458-11639477 | None:intergenic | 60.0% | |
| TAGAGCCTATGAGGGGGGAG+GGG | - | chr1.2:11638939-11638958 | None:intergenic | 60.0% | |
| TCACCACTTCATGCCGCCAC+CGG | + | chr1.2:11639176-11639195 | MS.gene059157:intron | 60.0% | |
| TCCAGTGAGGTGGTGTGCAC+TGG | - | chr1.2:11639423-11639442 | None:intergenic | 60.0% | |
| TCCAGTGCACACCACCTCAC+TGG | + | chr1.2:11639419-11639438 | MS.gene059157:intron | 60.0% | |
| TGGCGGCATGAAGTGGTGAG+TGG | - | chr1.2:11639175-11639194 | None:intergenic | 60.0% | |
| TGTACGGTGCATGCAGGACG+GGG | - | chr1.2:11639452-11639471 | None:intergenic | 60.0% | |
| ! | CGGCTTGGGGGCAACTGTTA+TGG | + | chr1.2:11639313-11639332 | MS.gene059157:intron | 60.0% |
| ! | GCGCCGCATTTCTAGGGAAC+CGG | + | chr1.2:11639498-11639517 | MS.gene059157:intron | 60.0% |
| ! | GGCGTTGGAGGCCACATGTA+CGG | - | chr1.2:11639468-11639487 | None:intergenic | 60.0% |
| ! | TCTAGAGCCTATGAGGGGGG+AGG | - | chr1.2:11638941-11638960 | None:intergenic | 60.0% |
| AACGTGCGTGCACCCCACGA+TGG | + | chr1.2:11639074-11639093 | MS.gene059157:intron | 65.0% | |
| AGAGCCTATGAGGGGGGAGG+GGG | - | chr1.2:11638938-11638957 | None:intergenic | 65.0% | |
| AGTTCCCCCTCCCCCCTCAT+AGG | + | chr1.2:11638931-11638950 | MS.gene059157:intron | 65.0% | |
| ATCGTGGGGTGCACGCACGT+TGG | - | chr1.2:11639075-11639094 | None:intergenic | 65.0% | |
| GTACGGTGCATGCAGGACGG+GGG | - | chr1.2:11639451-11639470 | None:intergenic | 65.0% | |
| TCGTGGGGTGCACGCACGTT+GGG | - | chr1.2:11639074-11639093 | None:intergenic | 65.0% | |
| ! | GATCCGGTGGCGGCATGAAG+TGG | - | chr1.2:11639182-11639201 | None:intergenic | 65.0% |
| GCCTCCAACGCCCCCTGATG+AGG | + | chr1.2:11639476-11639495 | MS.gene059157:intron | 70.0% | |
| GGTGTCCGGGGTTCGAACCC+CGG | - | chr1.2:11639770-11639789 | None:intergenic | 70.0% | |
| TGGGGTGCACGCACGTTGGG+AGG | - | chr1.2:11639071-11639090 | None:intergenic | 70.0% | |
| !! | GACGGGGGCGTCTTCCAGTG+AGG | - | chr1.2:11639436-11639455 | None:intergenic | 70.0% |
| !! | GCCTCATCAGGGGGCGTTGG+AGG | - | chr1.2:11639480-11639499 | None:intergenic | 70.0% |
| !! | GGGGGCGTCTTCCAGTGAGG+TGG | - | chr1.2:11639433-11639452 | None:intergenic | 70.0% |
| CAGGGCCGGGGTTCGAACCC+CGG | + | chr1.2:11639762-11639781 | MS.gene059157:intron | 75.0% | |
| ! | GGCGCCTCATCAGGGGGCGT+TGG | - | chr1.2:11639483-11639502 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 11636324 | 11641129 | 11636324 | ID=MS.gene059157 |
| chr1.2 | mRNA | 11636324 | 11641129 | 11636324 | ID=MS.gene059157.t1;Parent=MS.gene059157 |
| chr1.2 | exon | 11636324 | 11636552 | 11636324 | ID=MS.gene059157.t1.exon1;Parent=MS.gene059157.t1 |
| chr1.2 | CDS | 11636324 | 11636552 | 11636324 | ID=cds.MS.gene059157.t1;Parent=MS.gene059157.t1 |
| chr1.2 | exon | 11636656 | 11637415 | 11636656 | ID=MS.gene059157.t1.exon2;Parent=MS.gene059157.t1 |
| chr1.2 | CDS | 11636656 | 11637415 | 11636656 | ID=cds.MS.gene059157.t1;Parent=MS.gene059157.t1 |
| chr1.2 | exon | 11639977 | 11640146 | 11639977 | ID=MS.gene059157.t1.exon3;Parent=MS.gene059157.t1 |
| chr1.2 | CDS | 11639977 | 11640146 | 11639977 | ID=cds.MS.gene059157.t1;Parent=MS.gene059157.t1 |
| chr1.2 | exon | 11640810 | 11641129 | 11640810 | ID=MS.gene059157.t1.exon4;Parent=MS.gene059157.t1 |
| chr1.2 | CDS | 11640810 | 11641129 | 11640810 | ID=cds.MS.gene059157.t1;Parent=MS.gene059157.t1 |
| Gene Sequence |
| Protein sequence |
