AlfalfaGEDB | MS.gene58319

M. sativa cultivar XinJiangDaYe / MS.gene58319

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58319.t1	RHN40013.1	64.8	162	53	2	32	189	232	393	1.20E-48	203

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58319.t1	G7LCP4	64.8	162	53	2	32	189	211	372	9.0e-49	203.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene60027	MS.gene58319	PPI
MS.gene045475	MS.gene58319	PPI
MS.gene038756	MS.gene58319	PPI
MS.gene88776	MS.gene58319	PPI
MS.gene58319	MS.gene064083	PPI
MS.gene35068	MS.gene58319	PPI
MS.gene041390	MS.gene58319	PPI
MS.gene24286	MS.gene58319	PPI
MS.gene058693	MS.gene58319	PPI
MS.gene92376	MS.gene58319	PPI
MS.gene000035	MS.gene58319	PPI
MS.gene50329	MS.gene58319	PPI
MS.gene070462	MS.gene58319	PPI
MS.gene58319	MS.gene024420	PPI
MS.gene31637	MS.gene58319	PPI
MS.gene87573	MS.gene58319	PPI
MS.gene58319	MS.gene024008	PPI
MS.gene58319	MS.gene54541	PPI
MS.gene57537	MS.gene58319	PPI
MS.gene42447	MS.gene58319	PPI
MS.gene019504	MS.gene58319	PPI
MS.gene034762	MS.gene58319	PPI
MS.gene064114	MS.gene58319	PPI
MS.gene059156	MS.gene58319	PPI
MS.gene58319	MS.gene053299	PPI
MS.gene58319	MS.gene28758	PPI
MS.gene58716	MS.gene58319	PPI
MS.gene68580	MS.gene58319	PPI
MS.gene033444	MS.gene58319	PPI
MS.gene50306	MS.gene58319	PPI
MS.gene58319	MS.gene69307	PPI
MS.gene58316	MS.gene58319	PPI
MS.gene066639	MS.gene58319	PPI
MS.gene26949	MS.gene58319	PPI
MS.gene044426	MS.gene58319	PPI
MS.gene012215	MS.gene58319	PPI
MS.gene50309	MS.gene58319	PPI
MS.gene036760	MS.gene58319	PPI
MS.gene58311	MS.gene58319	PPI
MS.gene058669	MS.gene58319	PPI
MS.gene57527	MS.gene58319	PPI
MS.gene59637	MS.gene58319	PPI
MS.gene26830	MS.gene58319	PPI
MS.gene033432	MS.gene58319	PPI
MS.gene58319	MS.gene58314	PPI
MS.gene035237	MS.gene58319	PPI
MS.gene58319	MS.gene96406	PPI
MS.gene59639	MS.gene58319	PPI
MS.gene034681	MS.gene58319	PPI
MS.gene031590	MS.gene58319	PPI
MS.gene036584	MS.gene58319	PPI
MS.gene50327	MS.gene58319	PPI
MS.gene066635	MS.gene58319	PPI
MS.gene035261	MS.gene58319	PPI
MS.gene010758	MS.gene58319	PPI
MS.gene96406	MS.gene58319	PPI
MS.gene063670	MS.gene58319	PPI
MS.gene57530	MS.gene58319	PPI
MS.gene066626	MS.gene58319	PPI
MS.gene58319	MS.gene058703	PPI
MS.gene019506	MS.gene58319	PPI
MS.gene50326	MS.gene58319	PPI
MS.gene42451	MS.gene58319	PPI
MS.gene51200	MS.gene58319	PPI
MS.gene54541	MS.gene58319	PPI
MS.gene58319	MS.gene032969	PPI
MS.gene024002	MS.gene58319	PPI
MS.gene036581	MS.gene58319	PPI
MS.gene87564	MS.gene58319	PPI
MS.gene88774	MS.gene58319	PPI
MS.gene58319	MS.gene22715	PPI
MS.gene034686	MS.gene58319	PPI
MS.gene42452	MS.gene58319	PPI
MS.gene003076	MS.gene58319	PPI
MS.gene40986	MS.gene58319	PPI
MS.gene063414	MS.gene58319	PPI
MS.gene58319	MS.gene36595	PPI
MS.gene69307	MS.gene58319	PPI
MS.gene009892	MS.gene58319	PPI
MS.gene036662	MS.gene58319	PPI
MS.gene58319	MS.gene061240	PPI
MS.gene87563	MS.gene58319	PPI
MS.gene57526	MS.gene58319	PPI
MS.gene064109	MS.gene58319	PPI
MS.gene021553	MS.gene58319	PPI
MS.gene58319	MS.gene50311	PPI
MS.gene051820	MS.gene58319	PPI
MS.gene26957	MS.gene58319	PPI
MS.gene97996	MS.gene58319	PPI
MS.gene036582	MS.gene58319	PPI
MS.gene27021	MS.gene58319	PPI
MS.gene58319	MS.gene035234	PPI
MS.gene035235	MS.gene58319	PPI
MS.gene58319	MS.gene058989	PPI
MS.gene40988	MS.gene58319	PPI
MS.gene58320	MS.gene58319	PPI
MS.gene81242	MS.gene58319	PPI
MS.gene58319	MS.gene57538	PPI
MS.gene26101	MS.gene58319	PPI
MS.gene066120	MS.gene58319	PPI
MS.gene27283	MS.gene58319	PPI
MS.gene58319	MS.gene041468	PPI
MS.gene64203	MS.gene58319	PPI
MS.gene045140	MS.gene58319	PPI
MS.gene053299	MS.gene58319	PPI
MS.gene024004	MS.gene58319	PPI
MS.gene42444	MS.gene58319	PPI
MS.gene58319	MS.gene42447	PPI
MS.gene51202	MS.gene58319	PPI
MS.gene059101	MS.gene58319	PPI
MS.gene44886	MS.gene58319	PPI
MS.gene87562	MS.gene58319	PPI
MS.gene066623	MS.gene58319	PPI
MS.gene40904	MS.gene58319	PPI
MS.gene58319	MS.gene044425	PPI
MS.gene024420	MS.gene58319	PPI
MS.gene87569	MS.gene58319	PPI
MS.gene041491	MS.gene58319	PPI
MS.gene51201	MS.gene58319	PPI
MS.gene58319	MS.gene59637	PPI
MS.gene58319	MS.gene24173	PPI
MS.gene88416	MS.gene58319	PPI
MS.gene033443	MS.gene58319	PPI
MS.gene51207	MS.gene58319	PPI
MS.gene50337	MS.gene58319	PPI
MS.gene059096	MS.gene58319	PPI
MS.gene57528	MS.gene58319	PPI
MS.gene58319	MS.gene27022	PPI
MS.gene50297	MS.gene58319	PPI
MS.gene006711	MS.gene58319	PPI
MS.gene50332	MS.gene58319	PPI
MS.gene27285	MS.gene58319	PPI
MS.gene064091	MS.gene58319	PPI
MS.gene58319	MS.gene023999	PPI
MS.gene019505	MS.gene58319	PPI
MS.gene064112	MS.gene58319	PPI
MS.gene053257	MS.gene58319	PPI
MS.gene045476	MS.gene58319	PPI
MS.gene58785	MS.gene58319	PPI
MS.gene24208	MS.gene58319	PPI
MS.gene50307	MS.gene58319	PPI
MS.gene034690	MS.gene58319	PPI
MS.gene044429	MS.gene58319	PPI
MS.gene51189	MS.gene58319	PPI
MS.gene85454	MS.gene58319	PPI
MS.gene58319	MS.gene036581	PPI
MS.gene96407	MS.gene58319	PPI
MS.gene036558	MS.gene58319	PPI
MS.gene58319	MS.gene035237	PPI
MS.gene77857	MS.gene58319	PPI
MS.gene43790	MS.gene58319	PPI
MS.gene58319	MS.gene000036	PPI
MS.gene51191	MS.gene58319	PPI
MS.gene58319	MS.gene50320	PPI
MS.gene58319	MS.gene035263	PPI
MS.gene033426	MS.gene58319	PPI
MS.gene064086	MS.gene58319	PPI
MS.gene033430	MS.gene58319	PPI
MS.gene58319	MS.gene053257	PPI
MS.gene034677	MS.gene58319	PPI
MS.gene50298	MS.gene58319	PPI
MS.gene67687	MS.gene58319	PPI
MS.gene58319	MS.gene51201	PPI
MS.gene58319	MS.gene009893	PPI
MS.gene055694	MS.gene58319	PPI
MS.gene71159	MS.gene58319	PPI
MS.gene96448	MS.gene58319	PPI
MS.gene77858	MS.gene58319	PPI
MS.gene058692	MS.gene58319	PPI
MS.gene041392	MS.gene58319	PPI
MS.gene58319	MS.gene047279	PPI
MS.gene58319	MS.gene50305	PPI
MS.gene033083	MS.gene58319	PPI
MS.gene69309	MS.gene58319	PPI
MS.gene63658	MS.gene58319	PPI
MS.gene033081	MS.gene58319	PPI
MS.gene58319	MS.gene42445	PPI
MS.gene031591	MS.gene58319	PPI
MS.gene035263	MS.gene58319	PPI
MS.gene58319	MS.gene036663	PPI
MS.gene035262	MS.gene58319	PPI
MS.gene40982	MS.gene58319	PPI
MS.gene070461	MS.gene58319	PPI
MS.gene51199	MS.gene58319	PPI
MS.gene58319	MS.gene63657	PPI
MS.gene064108	MS.gene58319	PPI
MS.gene58315	MS.gene58319	PPI
MS.gene58319	MS.gene023996	PPI
MS.gene87557	MS.gene58319	PPI
MS.gene58319	MS.gene045473	PPI
MS.gene030114	MS.gene58319	PPI
MS.gene87559	MS.gene58319	PPI
MS.gene58319	MS.gene50301	PPI
MS.gene041473	MS.gene58319	PPI
MS.gene036663	MS.gene58319	PPI
MS.gene033431	MS.gene58319	PPI
MS.gene24212	MS.gene58319	PPI
MS.gene041475	MS.gene58319	PPI
MS.gene063474	MS.gene58319	PPI
MS.gene063826	MS.gene58319	PPI
MS.gene060367	MS.gene58319	PPI
MS.gene58319	MS.gene024979	PPI
MS.gene44892	MS.gene58319	PPI
MS.gene036664	MS.gene58319	PPI
MS.gene024011	MS.gene58319	PPI
MS.gene064111	MS.gene58319	PPI
MS.gene87584	MS.gene58319	PPI
MS.gene58319	MS.gene43790	PPI
MS.gene26829	MS.gene58319	PPI
MS.gene39262	MS.gene58319	PPI
MS.gene064104	MS.gene58319	PPI
MS.gene40878	MS.gene58319	PPI
MS.gene053256	MS.gene58319	PPI
MS.gene75875	MS.gene58319	PPI
MS.gene064090	MS.gene58319	PPI
MS.gene54049	MS.gene58319	PPI
MS.gene43789	MS.gene58319	PPI
MS.gene006710	MS.gene58319	PPI
MS.gene58319	MS.gene003076	PPI
MS.gene072177	MS.gene58319	PPI
MS.gene58722	MS.gene58319	PPI
MS.gene58319	MS.gene024009	PPI
MS.gene58319	MS.gene036599	PPI
MS.gene033079	MS.gene58319	PPI
MS.gene061241	MS.gene58319	PPI
MS.gene24213	MS.gene58319	PPI
MS.gene43796	MS.gene58319	PPI
MS.gene58319	MS.gene006705	PPI
MS.gene58312	MS.gene58319	PPI
MS.gene36704	MS.gene58319	PPI
MS.gene77856	MS.gene58319	PPI
MS.gene24826	MS.gene58319	PPI
MS.gene58319	MS.gene38220	PPI
MS.gene036556	MS.gene58319	PPI
MS.gene58313	MS.gene58319	PPI
MS.gene066622	MS.gene58319	PPI
MS.gene58319	MS.gene03060	PPI
MS.gene44887	MS.gene58319	PPI
MS.gene85043	MS.gene58319	PPI
MS.gene39265	MS.gene58319	PPI
MS.gene51188	MS.gene58319	PPI
MS.gene63655	MS.gene58319	PPI
MS.gene44883	MS.gene58319	PPI
MS.gene58319	MS.gene064109	PPI
MS.gene58319	MS.gene058696	PPI
MS.gene036583	MS.gene58319	PPI
MS.gene88780	MS.gene58319	PPI
MS.gene41046	MS.gene58319	PPI
MS.gene063472	MS.gene58319	PPI
MS.gene87588	MS.gene58319	PPI
MS.gene017412	MS.gene58319	PPI
MS.gene58314	MS.gene58319	PPI
MS.gene80884	MS.gene58319	PPI
MS.gene51192	MS.gene58319	PPI
MS.gene87585	MS.gene58319	PPI
MS.gene009883	MS.gene58319	PPI
MS.gene58317	MS.gene58319	PPI
MS.gene044563	MS.gene58319	PPI
MS.gene069075	MS.gene58319	PPI
MS.gene033427	MS.gene58319	PPI
MS.gene40985	MS.gene58319	PPI
MS.gene041474	MS.gene58319	PPI
MS.gene58319	MS.gene041391	PPI
MS.gene58321	MS.gene58319	PPI
MS.gene041388	MS.gene58319	PPI
MS.gene062698	MS.gene58319	PPI
MS.gene57536	MS.gene58319	PPI
MS.gene96126	MS.gene58319	PPI
MS.gene019503	MS.gene58319	PPI
MS.gene58319	MS.gene030114	PPI
MS.gene51208	MS.gene58319	PPI
MS.gene016524	MS.gene58319	PPI
MS.gene50304	MS.gene58319	PPI
MS.gene58319	MS.gene036558	PPI
MS.gene50336	MS.gene58319	PPI
MS.gene58319	MS.gene87554	PPI
MS.gene59943	MS.gene58319	PPI
MS.gene90744	MS.gene58319	PPI
MS.gene51204	MS.gene58319	PPI
MS.gene58783	MS.gene58319	PPI
MS.gene58319	MS.gene40984	PPI
MS.gene31587	MS.gene58319	PPI
MS.gene036557	MS.gene58319	PPI
MS.gene58319	MS.gene048193	PPI
MS.gene041393	MS.gene58319	PPI
MS.gene033441	MS.gene58319	PPI
MS.gene58319	MS.gene016220	PPI
MS.gene048193	MS.gene58319	PPI
MS.gene84698	MS.gene58319	PPI
MS.gene009891	MS.gene58319	PPI
MS.gene58239	MS.gene58319	PPI
MS.gene58319	MS.gene58240	PPI
MS.gene066641	MS.gene58319	PPI
MS.gene82082	MS.gene58319	PPI
MS.gene58319	MS.gene27284	PPI
MS.gene000038	MS.gene58319	PPI
MS.gene57531	MS.gene58319	PPI
MS.gene58319	MS.gene034680	PPI
MS.gene67501	MS.gene58319	PPI
MS.gene90742	MS.gene58319	PPI
MS.gene58241	MS.gene58319	PPI
MS.gene57535	MS.gene58319	PPI
MS.gene025887	MS.gene58319	PPI
MS.gene019507	MS.gene58319	PPI
MS.gene045474	MS.gene58319	PPI
MS.gene041470	MS.gene58319	PPI
MS.gene058694	MS.gene58319	PPI
MS.gene87200	MS.gene58319	PPI
MS.gene58319	MS.gene51190	PPI
MS.gene058701	MS.gene58319	PPI
MS.gene015089	MS.gene58319	PPI
MS.gene58319	MS.gene57532	PPI
MS.gene90743	MS.gene58319	PPI
MS.gene58319	MS.gene033442	PPI
MS.gene44885	MS.gene58319	PPI
MS.gene011679	MS.gene58319	PPI
MS.gene060370	MS.gene58319	PPI
MS.gene64001	MS.gene58319	PPI
MS.gene57533	MS.gene58319	PPI
MS.gene58319	MS.gene87557	PPI
MS.gene58319	MS.gene44428	PPI
MS.gene58319	MS.gene058669	PPI
MS.gene032970	MS.gene58319	PPI
MS.gene87586	MS.gene58319	PPI
MS.gene58319	MS.gene041489	PPI
MS.gene57532	MS.gene58319	PPI
MS.gene68890	MS.gene58319	PPI
MS.gene40887	MS.gene58319	PPI
MS.gene58319	MS.gene024000	PPI
MS.gene50339	MS.gene58319	PPI
MS.gene046958	MS.gene58319	PPI
MS.gene034688	MS.gene58319	PPI
MS.gene060366	MS.gene58319	PPI
MS.gene047279	MS.gene58319	PPI
MS.gene48221	MS.gene58319	PPI
MS.gene58319	MS.gene035238	PPI
MS.gene58319	MS.gene58316	PPI
MS.gene58319	MS.gene064114	PPI
MS.gene57529	MS.gene58319	PPI
MS.gene58319	MS.gene87584	PPI
MS.gene58319	MS.gene80610	PPI
MS.gene041395	MS.gene58319	PPI
MS.gene40886	MS.gene58319	PPI
MS.gene40902	MS.gene58319	PPI
MS.gene03060	MS.gene58319	PPI
MS.gene27051	MS.gene58319	PPI
MS.gene060368	MS.gene58319	PPI
MS.gene033875	MS.gene58319	PPI
MS.gene77704	MS.gene58319	PPI
MS.gene27020	MS.gene58319	PPI
MS.gene066620	MS.gene58319	PPI
MS.gene035236	MS.gene58319	PPI
MS.gene58319	MS.gene27319	PPI
MS.gene86273	MS.gene58319	PPI
MS.gene041394	MS.gene58319	PPI
MS.gene059157	MS.gene58319	PPI
MS.gene58781	MS.gene58319	PPI
MS.gene57717	MS.gene58319	PPI
MS.gene57525	MS.gene58319	PPI
MS.gene028390	MS.gene58319	PPI
MS.gene011106	MS.gene58319	PPI
MS.gene033440	MS.gene58319	PPI
MS.gene62398	MS.gene58319	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58319.t1	MTR_8g433030	64.815	162	53	2	32	189	178	339	8.13e-64	200
MS.gene58319.t1	MTR_8g032390	64.815	162	53	2	32	189	211	372	2.98e-63	199
MS.gene58319.t1	MTR_8g433040	62.805	164	47	2	27	187	207	359	6.24e-60	191
MS.gene58319.t1	MTR_8g032380	62.805	164	47	2	27	187	207	359	6.24e-60	191
MS.gene58319.t1	MTR_6g060650	52.096	167	68	5	26	186	207	367	7.26e-45	152
MS.gene58319.t1	MTR_4g023130	54.088	159	65	4	34	187	153	308	9.43e-45	150
MS.gene58319.t1	MTR_4g023080	52.830	159	67	4	34	187	194	349	5.65e-44	149
MS.gene58319.t1	MTR_4g116320	50.909	165	74	3	29	187	90	253	5.34e-43	144
MS.gene58319.t1	MTR_4g116330	50.909	165	72	4	31	187	212	375	6.22e-43	147
MS.gene58319.t1	MTR_3g103020	50.909	165	74	3	29	187	210	373	1.31e-42	146
MS.gene58319.t1	MTR_8g040935	47.674	172	81	3	25	187	32	203	1.47e-42	142
MS.gene58319.t1	MTR_4g117720	50.877	171	71	4	29	188	205	373	2.33e-42	146
MS.gene58319.t1	MTR_6g463430	51.923	156	70	4	35	187	44	197	1.75e-41	139
MS.gene58319.t1	MTR_4g109270	48.521	169	78	4	25	187	194	359	2.03e-41	143
MS.gene58319.t1	MTR_4g094365	51.572	159	69	4	35	186	201	358	2.79e-41	142
MS.gene58319.t1	MTR_4g021785	51.299	154	69	3	38	187	199	350	7.23e-41	141
MS.gene58319.t1	MTR_1g055175	49.351	154	70	4	40	187	45	196	1.45e-40	136
MS.gene58319.t1	MTR_4g122850	55.346	159	62	6	36	187	203	359	2.34e-40	140
MS.gene58319.t1	MTR_4g023090	48.256	172	70	4	34	187	209	379	3.15e-40	140
MS.gene58319.t1	MTR_1g055165	49.351	154	70	4	40	187	162	313	3.90e-39	136
MS.gene58319.t1	MTR_4g118380	52.667	150	55	4	29	165	209	355	5.03e-39	137
MS.gene58319.t1	MTR_4g023380	45.251	179	71	4	34	186	194	371	1.08e-38	136
MS.gene58319.t1	MTR_4g109280	51.899	158	64	5	36	185	199	352	1.49e-38	135
MS.gene58319.t1	MTR_4g023070	46.857	175	73	4	30	187	194	365	3.42e-38	135
MS.gene58319.t1	MTR_4g117850	45.882	170	83	3	25	185	204	373	1.98e-37	133
MS.gene58319.t1	MTR_3g034130	52.857	140	59	4	29	164	210	346	2.14e-37	132
MS.gene58319.t1	MTR_5g097210	50.980	153	67	4	40	187	209	358	7.41e-37	131
MS.gene58319.t1	MTR_5g070080	50.625	160	71	4	35	188	224	381	7.58e-37	131
MS.gene58319.t1	MTR_4g023120	46.108	167	72	3	38	187	200	365	3.42e-36	129
MS.gene58319.t1	MTR_3g034180	48.485	165	75	5	29	187	324	484	1.70e-35	129
MS.gene58319.t1	MTR_1g055135	48.408	157	70	5	40	187	216	370	2.09e-35	127
MS.gene58319.t1	MTR_1g055195	49.677	155	65	6	40	186	323	472	1.09e-33	125
MS.gene58319.t1	MTR_4g023190	50.000	170	67	7	31	187	190	354	1.37e-33	122
MS.gene58319.t1	MTR_4g023150	48.851	174	70	7	28	187	187	355	3.59e-33	121
MS.gene58319.t1	MTR_5g070130	48.387	155	72	4	41	188	219	372	9.32e-33	120
MS.gene58319.t1	MTR_3g034160	49.390	164	75	4	29	187	210	370	1.23e-32	120
MS.gene58319.t1	MTR_4g023200	46.988	166	71	6	34	187	195	355	7.18e-32	118
MS.gene58319.t1	MTR_4g118400	46.154	169	60	6	29	186	146	294	9.96e-32	116
MS.gene58319.t1	MTR_4g117870	51.515	132	53	4	61	187	137	262	6.72e-31	113
MS.gene58319.t1	MTR_4g117780	43.373	166	84	5	31	187	198	362	1.82e-29	112
MS.gene58319.t1	MTR_7g079400	45.122	164	76	6	36	188	173	333	2.40e-29	110
MS.gene58319.t1	MTR_4g117770	45.342	161	78	5	36	187	203	362	8.38e-29	110
MS.gene58319.t1	MTR_4g117810	45.342	161	78	5	36	187	203	362	8.38e-29	110
MS.gene58319.t1	MTR_5g070088	44.767	172	84	5	27	188	211	381	1.43e-28	109
MS.gene58319.t1	MTR_7g079370	41.899	179	92	7	16	188	180	352	1.50e-28	109
MS.gene58319.t1	MTR_4g118370	44.371	151	60	4	41	187	125	255	4.14e-28	106
MS.gene58319.t1	MTR_1g055250	47.656	128	62	4	40	165	115	239	7.16e-28	107
MS.gene58319.t1	MTR_4g117530	40.764	157	57	4	35	187	124	248	4.11e-26	100
MS.gene58319.t1	MTR_4g118360	53.333	105	41	3	88	186	18	120	1.11e-25	96.3
MS.gene58319.t1	MTR_4g117750	52.830	106	44	2	88	187	373	478	1.91e-25	102
MS.gene58319.t1	MTR_4g117750	45.625	160	71	6	40	187	199	354	1.04e-23	97.4
MS.gene58319.t1	MTR_8g102520	38.462	169	94	5	27	188	153	318	9.26e-25	98.6
MS.gene58319.t1	MTR_7g079420	39.024	164	85	7	35	188	982	1140	1.64e-24	100
MS.gene58319.t1	MTR_4g122860	39.873	158	58	4	39	186	184	314	3.44e-24	97.4
MS.gene58319.t1	MTR_5g023000	56.989	93	34	2	101	187	2	94	4.08e-24	91.3
MS.gene58319.t1	MTR_4g121580	47.287	129	41	4	35	162	217	319	5.58e-24	97.4
MS.gene58319.t1	MTR_7g079450	43.704	135	67	4	59	188	3	133	1.63e-22	88.6
MS.gene58319.t1	MTR_8g098830	41.611	149	67	7	27	165	58	196	1.76e-22	90.9
MS.gene58319.t1	MTR_4g023440	39.873	158	53	4	34	187	208	327	1.42e-21	90.1
MS.gene58319.t1	MTR_4g116330	38.788	165	53	4	31	187	212	336	8.39e-21	88.2
MS.gene58319.t1	MTR_4g117430	58.065	62	25	1	36	97	92	152	1.77e-16	73.2
MS.gene58319.t1	MTR_2g048580	33.333	171	84	7	31	188	185	338	9.02e-16	74.3
MS.gene58319.t1	MTR_7g117720	45.977	87	37	3	111	187	186	272	3.96e-12	63.5
MS.gene58319.t1	MTR_4g114700	53.968	63	25	1	106	164	132	194	3.20e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 41 sgRNAs with CRISPR-Local

Find 43 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATTGTTGTCTTTGATTTAA+TGG	0.084690	8.2:-65726575	MS.gene58319:CDS
TATTATGATTTGTGGGTATT+TGG	0.191816	8.2:-65726499	MS.gene58319:CDS
ATAATTGGACAATTGAAATA+TGG	0.213992	8.2:-65726444	MS.gene58319:CDS
TTGGAAAATTTCTCAGTCTA+TGG	0.237424	8.2:-65726480	MS.gene58319:CDS
TAATCCTGCTTTGGAAGCTT+TGG	0.326447	8.2:+65726657	None:intergenic
TAATCCTGCTTTGGAAGCTT+TGG	0.330098	8.2:+65726748	None:intergenic
TCTTCAATGGGGCTATTCAT+TGG	0.385937	8.2:-65726724	MS.gene58319:CDS
TGTTCAATGGGGCTATTCAT+TGG	0.388420	8.2:-65726633	MS.gene58319:CDS
ATTGAACAATAATCCTGCTT+TGG	0.394314	8.2:+65726648	None:intergenic
ATTGAAGAATAATCCTGCTT+TGG	0.397965	8.2:+65726739	None:intergenic
AAAGCAGGATTATTCTTCAA+TGG	0.398001	8.2:-65726737	MS.gene58319:CDS
TAATTGGACAATTGAAATAT+GGG	0.403350	8.2:-65726443	MS.gene58319:CDS
ATCTTGGGTATTATGATTTG+TGG	0.405974	8.2:-65726507	MS.gene58319:CDS
AAGCAGGATTATTGTTCAAT+GGG	0.407485	8.2:-65726645	MS.gene58319:CDS
AAGCAGGATTATTCTTCAAT+GGG	0.407987	8.2:-65726736	MS.gene58319:CDS
CAATGGGGCTATTCATTGGT+TGG	0.409278	8.2:-65726629	MS.gene58319:CDS
CAATGGGGCTATTCATTGGT+TGG	0.409603	8.2:-65726720	MS.gene58319:CDS
AAAGCAGGATTATTGTTCAA+TGG	0.422321	8.2:-65726646	MS.gene58319:CDS
ACTAAAAGTGGTGATATTGT+TGG	0.440141	8.2:-65726337	MS.gene58319:CDS
AAACGGAGACTCTGTATTCA+TGG	0.450730	8.2:+65726225	None:intergenic
AGATTGTGGTCAAAATCAAC+TGG	0.461270	8.2:+65726526	None:intergenic
TCTTGGGTATTATGATTTGT+GGG	0.466968	8.2:-65726506	MS.gene58319:CDS
TATGCCAAAGCTTCCAAAGC+AGG	0.478827	8.2:-65726661	MS.gene58319:CDS
TATGCCAAAGCTTCCAAAGC+AGG	0.478827	8.2:-65726752	MS.gene58319:CDS
CTTATATACTCTACTAAAAG+TGG	0.484913	8.2:-65726349	MS.gene58319:CDS
TTTGTGAAGTATAATGATAA+AGG	0.492510	8.2:-65726295	MS.gene58319:CDS
GGTCCACCAGGGAGTGAAAA+CGG	0.498553	8.2:+65726208	None:intergenic
AATACAAACAACATTCGTCT+TGG	0.503398	8.2:-65726411	MS.gene58319:CDS
GGAAGCTTTGGCATAATCCA+TGG	0.505733	8.2:+65726669	None:intergenic
TTGTCTTTGATTTAATGGAA+AGG	0.526787	8.2:-65726570	MS.gene58319:CDS
TGGTCAAAATCAACTGGAAG+AGG	0.526874	8.2:+65726532	None:intergenic
AAATTTGATCATGGTCCACC+AGG	0.534299	8.2:+65726196	None:intergenic
GGTGATATTGTTGGAACTGA+TGG	0.589833	8.2:-65726328	MS.gene58319:CDS
AATCATAATACCCAAGATTG+TGG	0.590736	8.2:+65726512	None:intergenic
ATATAAGGGAAAAGCACAGA+AGG	0.594922	8.2:+65726365	None:intergenic
CATGATATGCGTGAATACCA+TGG	0.597731	8.2:-65726686	MS.gene58319:CDS
GTTGGAACTGATGGTGCTAG+TGG	0.597956	8.2:-65726319	MS.gene58319:CDS
GAATCTGAATGCATCTGAAG+TGG	0.614691	8.2:-65726248	MS.gene58319:CDS
AATTTGATCATGGTCCACCA+GGG	0.660460	8.2:+65726197	None:intergenic
AGCAGGATTATTCTTCAATG+GGG	0.673360	8.2:-65726735	MS.gene58319:CDS
AGCAGGATTATTGTTCAATG+GGG	0.682100	8.2:-65726644	MS.gene58319:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAATTGGACAATTGAAATA+TGG	-	chr8.2:65726511-65726530	MS.gene58319:CDS	20.0%
!!	TAATTGGACAATTGAAATAT+GGG	-	chr8.2:65726512-65726531	MS.gene58319:CDS	20.0%
!!	TTTGTGAAGTATAATGATAA+AGG	-	chr8.2:65726660-65726679	MS.gene58319:CDS	20.0%
!!!	ACTTTTAGTAGAGTATATAA+GGG	+	chr8.2:65726607-65726626	None:intergenic	20.0%
!!!	GGAAAAGAAATTTTCATAAT+TGG	-	chr8.2:65726496-65726515	MS.gene58319:CDS	20.0%
!!!	TATTGTTGTCTTTGATTTAA+TGG	-	chr8.2:65726380-65726399	MS.gene58319:CDS	20.0%
!	CTTATATACTCTACTAAAAG+TGG	-	chr8.2:65726606-65726625	MS.gene58319:CDS	25.0%
!!	CACTTTTAGTAGAGTATATA+AGG	+	chr8.2:65726608-65726627	None:intergenic	25.0%
!!	TATTATGATTTGTGGGTATT+TGG	-	chr8.2:65726456-65726475	MS.gene58319:CDS	25.0%
!!	TTGTCTTTGATTTAATGGAA+AGG	-	chr8.2:65726385-65726404	MS.gene58319:CDS	25.0%
	AAAGCAGGATTATTCTTCAA+TGG	-	chr8.2:65726218-65726237	MS.gene58319:CDS	30.0%
	AAAGCAGGATTATTGTTCAA+TGG	-	chr8.2:65726309-65726328	MS.gene58319:CDS	30.0%
	AAGCAGGATTATTCTTCAAT+GGG	-	chr8.2:65726219-65726238	MS.gene58319:CDS	30.0%
	AAGCAGGATTATTGTTCAAT+GGG	-	chr8.2:65726310-65726329	MS.gene58319:CDS	30.0%
	AATACAAACAACATTCGTCT+TGG	-	chr8.2:65726544-65726563	MS.gene58319:CDS	30.0%
	AATCATAATACCCAAGATTG+TGG	+	chr8.2:65726446-65726465	None:intergenic	30.0%
	ACTAAAAGTGGTGATATTGT+TGG	-	chr8.2:65726618-65726637	MS.gene58319:CDS	30.0%
	ATCTTGGGTATTATGATTTG+TGG	-	chr8.2:65726448-65726467	MS.gene58319:CDS	30.0%
	ATTGAACAATAATCCTGCTT+TGG	+	chr8.2:65726310-65726329	None:intergenic	30.0%
	ATTGAAGAATAATCCTGCTT+TGG	+	chr8.2:65726219-65726238	None:intergenic	30.0%
	TTGGAAAATTTCTCAGTCTA+TGG	-	chr8.2:65726475-65726494	MS.gene58319:CDS	30.0%
!	TCTTGGGTATTATGATTTGT+GGG	-	chr8.2:65726449-65726468	MS.gene58319:CDS	30.0%
!!	TTGATTTTGACCACAATCTT+GGG	-	chr8.2:65726433-65726452	MS.gene58319:CDS	30.0%
	AGATTGTGGTCAAAATCAAC+TGG	+	chr8.2:65726432-65726451	None:intergenic	35.0%
	AGCAGGATTATTCTTCAATG+GGG	-	chr8.2:65726220-65726239	MS.gene58319:CDS	35.0%
	AGCAGGATTATTGTTCAATG+GGG	-	chr8.2:65726311-65726330	MS.gene58319:CDS	35.0%
!	ATATAAGGGAAAAGCACAGA+AGG	+	chr8.2:65726593-65726612	None:intergenic	35.0%
!!	GTTGATTTTGACCACAATCT+TGG	-	chr8.2:65726432-65726451	MS.gene58319:CDS	35.0%
	AAACGGAGACTCTGTATTCA+TGG	+	chr8.2:65726733-65726752	None:intergenic	40.0%
	CATGATATGCGTGAATACCA+TGG	-	chr8.2:65726269-65726288	MS.gene58319:CDS	40.0%
	GAATCTGAATGCATCTGAAG+TGG	-	chr8.2:65726707-65726726	MS.gene58319:CDS	40.0%
	GGTGATATTGTTGGAACTGA+TGG	-	chr8.2:65726627-65726646	MS.gene58319:CDS	40.0%
	TCTTCAATGGGGCTATTCAT+TGG	-	chr8.2:65726231-65726250	MS.gene58319:CDS	40.0%
	TGGTCAAAATCAACTGGAAG+AGG	+	chr8.2:65726426-65726445	None:intergenic	40.0%
	TGTTCAATGGGGCTATTCAT+TGG	-	chr8.2:65726322-65726341	MS.gene58319:CDS	40.0%
!!	TAATCCTGCTTTGGAAGCTT+TGG	+	chr8.2:65726210-65726229	None:intergenic	40.0%
	CAATGGGGCTATTCATTGGT+TGG	-	chr8.2:65726235-65726254	MS.gene58319:CDS	45.0%
	TATGCCAAAGCTTCCAAAGC+AGG	-	chr8.2:65726294-65726313	MS.gene58319:CDS	45.0%
!	GGAAGCTTTGGCATAATCCA+TGG	+	chr8.2:65726289-65726308	None:intergenic	45.0%
!	GTTGGAACTGATGGTGCTAG+TGG	-	chr8.2:65726636-65726655	MS.gene58319:CDS	50.0%
	GGTCCACCAGGGAGTGAAAA+CGG	+	chr8.2:65726750-65726769	None:intergenic	55.0%
!	GAGTCTCCGTTTTCACTCCC+TGG	-	chr8.2:65726741-65726760	MS.gene58319:CDS	55.0%
!	TCTCCGTTTTCACTCCCTGG+TGG	-	chr8.2:65726744-65726763	MS.gene58319:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.2	gene	65726204	65726773	65726204	ID=MS.gene58319
chr8.2	mRNA	65726204	65726773	65726204	ID=MS.gene58319.t1;Parent=MS.gene58319
chr8.2	exon	65726204	65726773	65726204	ID=MS.gene58319.t1.exon1;Parent=MS.gene58319.t1
chr8.2	CDS	65726204	65726773	65726204	ID=cds.MS.gene58319.t1;Parent=MS.gene58319.t1

Gene Sequence

>MS.gene58319

ATGCCAAAGCTTCCAAAGCAGGATTATTCTTCAATGGGGCTATTCATTGGTTGGTTTCTCATTATCATGATATGCGTGAATACCATGGATTATGCCAAAGCTTCCAAAGCAGGATTATTGTTCAATGGGGCTATTCATTGGTTGGCTTCTCATTATCATGATATGCGAGAGAAAGTTATTGTTGTCTTTGATTTAATGGAAAGGAAACTGTTACATATACCTCTTCCAGTTGATTTTGACCACAATCTTGGGTATTATGATTTGTGGGTATTTGGAAAATTTCTCAGTCTATGGAAAAGAAATTTTCATAATTGGACAATTGAAATATGGGTGATGAAGAAATACAAACAACATTCGTCTTGGACTAAGTCTCTTGTAATTTCTAGCCTTCTGTGCTTTTCCCTTATATACTCTACTAAAAGTGGTGATATTGTTGGAACTGATGGTGCTAGTGGATTTGTGAAGTATAATGATAAAGGACAGCAGATAGAGTATCTCGAAATGAATCTGAATGCATCTGAAGTGGCCATGAATACAGAGTCTCCGTTTTCACTCCCTGGTGGACCATGA

Protein sequence

>MS.gene58319.t1

MPKLPKQDYSSMGLFIGWFLIIMICVNTMDYAKASKAGLLFNGAIHWLASHYHDMREKVIVVFDLMERKLLHIPLPVDFDHNLGYYDLWVFGKFLSLWKRNFHNWTIEIWVMKKYKQHSSWTKSLVISSLLCFSLIYSTKSGDIVGTDGASGFVKYNDKGQQIEYLEMNLNASEVAMNTESPFSLPGGP