AlfalfaGEDB | MS.gene035261

M. sativa cultivar XinJiangDaYe / MS.gene035261

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene035261.t1	AES91738.2	94.3	122	7	0	1	122	236	357	3.40E-62	247.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene035261.t1	G7JHV9	94.3	122	7	0	1	122	236	357	2.4e-62	247.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene063826	MS.gene035261	PPI
MS.gene035261	MS.gene68580	PPI
MS.gene060367	MS.gene035261	PPI
MS.gene035261	MS.gene041391	PPI
MS.gene035261	MS.gene033443	PPI
MS.gene44892	MS.gene035261	PPI
MS.gene035261	MS.gene57525	PPI
MS.gene58239	MS.gene035261	PPI
MS.gene035261	MS.gene030114	PPI
MS.gene066641	MS.gene035261	PPI
MS.gene000038	MS.gene035261	PPI
MS.gene57531	MS.gene035261	PPI
MS.gene064111	MS.gene035261	PPI
MS.gene035261	MS.gene045474	PPI
MS.gene035261	MS.gene058701	PPI
MS.gene035261	MS.gene036558	PPI
MS.gene39262	MS.gene035261	PPI
MS.gene035261	MS.gene87554	PPI
MS.gene035261	MS.gene009891	PPI
MS.gene053256	MS.gene035261	PPI
MS.gene035261	MS.gene27051	PPI
MS.gene025887	MS.gene035261	PPI
MS.gene035261	MS.gene40984	PPI
MS.gene75875	MS.gene035261	PPI
MS.gene035261	MS.gene064108	PPI
MS.gene035261	MS.gene048193	PPI
MS.gene041470	MS.gene035261	PPI
MS.gene058694	MS.gene035261	PPI
MS.gene035261	MS.gene016220	PPI
MS.gene015089	MS.gene035261	PPI
MS.gene006710	MS.gene035261	PPI
MS.gene011679	MS.gene035261	PPI
MS.gene035261	MS.gene58240	PPI
MS.gene64001	MS.gene035261	PPI
MS.gene035261	MS.gene27284	PPI
MS.gene57533	MS.gene035261	PPI
MS.gene035261	MS.gene57717	PPI
MS.gene035261	MS.gene034680	PPI
MS.gene032970	MS.gene035261	PPI
MS.gene035261	MS.gene48221	PPI
MS.gene77856	MS.gene035261	PPI
MS.gene035261	MS.gene50327	PPI
MS.gene035261	MS.gene066626	PPI
MS.gene40887	MS.gene035261	PPI
MS.gene035261	MS.gene063474	PPI
MS.gene035261	MS.gene51190	PPI
MS.gene035261	MS.gene58319	PPI
MS.gene035261	MS.gene044426	PPI
MS.gene035261	MS.gene034681	PPI
MS.gene63655	MS.gene035261	PPI
MS.gene44883	MS.gene035261	PPI
MS.gene060366	MS.gene035261	PPI
MS.gene035261	MS.gene57532	PPI
MS.gene035261	MS.gene033442	PPI
MS.gene41046	MS.gene035261	PPI
MS.gene017412	MS.gene035261	PPI
MS.gene57529	MS.gene035261	PPI
MS.gene80884	MS.gene035261	PPI
MS.gene035261	MS.gene44428	PPI
MS.gene035261	MS.gene058669	PPI
MS.gene035261	MS.gene066120	PPI
MS.gene51192	MS.gene035261	PPI
MS.gene009883	MS.gene035261	PPI
MS.gene035261	MS.gene035235	PPI
MS.gene40902	MS.gene035261	PPI
MS.gene044563	MS.gene035261	PPI
MS.gene035261	MS.gene041489	PPI
MS.gene033427	MS.gene035261	PPI
MS.gene27051	MS.gene035261	PPI
MS.gene035261	MS.gene024000	PPI
MS.gene035261	MS.gene034688	PPI
MS.gene060368	MS.gene035261	PPI
MS.gene033875	MS.gene035261	PPI
MS.gene041474	MS.gene035261	PPI
MS.gene27020	MS.gene035261	PPI
MS.gene035261	MS.gene24213	PPI
MS.gene066620	MS.gene035261	PPI
MS.gene035236	MS.gene035261	PPI
MS.gene035261	MS.gene033079	PPI
MS.gene035261	MS.gene034677	PPI
MS.gene035261	MS.gene055694	PPI
MS.gene035261	MS.gene059101	PPI
MS.gene035261	MS.gene035238	PPI
MS.gene035261	MS.gene58316	PPI
MS.gene51208	MS.gene035261	PPI
MS.gene035261	MS.gene064114	PPI
MS.gene62398	MS.gene035261	PPI
MS.gene035261	MS.gene87584	PPI
MS.gene60027	MS.gene035261	PPI
MS.gene035261	MS.gene58315	PPI
MS.gene045475	MS.gene035261	PPI
MS.gene88776	MS.gene035261	PPI
MS.gene035261	MS.gene80610	PPI
MS.gene35068	MS.gene035261	PPI
MS.gene041390	MS.gene035261	PPI
MS.gene90744	MS.gene035261	PPI
MS.gene51204	MS.gene035261	PPI
MS.gene036557	MS.gene035261	PPI
MS.gene50329	MS.gene035261	PPI
MS.gene035261	MS.gene90743	PPI
MS.gene31637	MS.gene035261	PPI
MS.gene035261	MS.gene85454	PPI
MS.gene57537	MS.gene035261	PPI
MS.gene034762	MS.gene035261	PPI
MS.gene035261	MS.gene036556	PPI
MS.gene059156	MS.gene035261	PPI
MS.gene84698	MS.gene035261	PPI
MS.gene035261	MS.gene27319	PPI
MS.gene009891	MS.gene035261	PPI
MS.gene82082	MS.gene035261	PPI
MS.gene50306	MS.gene035261	PPI
MS.gene035261	MS.gene064083	PPI
MS.gene57535	MS.gene035261	PPI
MS.gene035261	MS.gene58783	PPI
MS.gene035261	MS.gene024420	PPI
MS.gene87200	MS.gene035261	PPI
MS.gene035261	MS.gene024008	PPI
MS.gene035261	MS.gene50337	PPI
MS.gene033432	MS.gene035261	PPI
MS.gene035261	MS.gene54541	PPI
MS.gene035261	MS.gene39265	PPI
MS.gene035261	MS.gene036584	PPI
MS.gene035261	MS.gene060368	PPI
MS.gene035261	MS.gene053299	PPI
MS.gene59639	MS.gene035261	PPI
MS.gene035261	MS.gene28758	PPI
MS.gene44885	MS.gene035261	PPI
MS.gene035261	MS.gene044429	PPI
MS.gene035261	MS.gene42451	PPI
MS.gene060370	MS.gene035261	PPI
MS.gene50327	MS.gene035261	PPI
MS.gene066635	MS.gene035261	PPI
MS.gene010758	MS.gene035261	PPI
MS.gene035261	MS.gene69307	PPI
MS.gene87586	MS.gene035261	PPI
MS.gene57530	MS.gene035261	PPI
MS.gene035261	MS.gene019507	PPI
MS.gene50326	MS.gene035261	PPI
MS.gene035261	MS.gene033431	PPI
MS.gene51200	MS.gene035261	PPI
MS.gene50339	MS.gene035261	PPI
MS.gene046958	MS.gene035261	PPI
MS.gene035261	MS.gene034762	PPI
MS.gene035261	MS.gene59943	PPI
MS.gene88774	MS.gene035261	PPI
MS.gene035261	MS.gene67501	PPI
MS.gene035261	MS.gene96406	PPI
MS.gene035261	MS.gene035262	PPI
MS.gene42452	MS.gene035261	PPI
MS.gene035261	MS.gene028390	PPI
MS.gene063414	MS.gene035261	PPI
MS.gene035261	MS.gene40878	PPI
MS.gene035261	MS.gene058703	PPI
MS.gene57526	MS.gene035261	PPI
MS.gene035261	MS.gene012215	PPI
MS.gene021553	MS.gene035261	PPI
MS.gene051820	MS.gene035261	PPI
MS.gene26957	MS.gene035261	PPI
MS.gene035261	MS.gene032969	PPI
MS.gene97996	MS.gene035261	PPI
MS.gene036582	MS.gene035261	PPI
MS.gene27021	MS.gene035261	PPI
MS.gene58320	MS.gene035261	PPI
MS.gene26101	MS.gene035261	PPI
MS.gene27283	MS.gene035261	PPI
MS.gene035261	MS.gene22715	PPI
MS.gene58781	MS.gene035261	PPI
MS.gene028390	MS.gene035261	PPI
MS.gene011106	MS.gene035261	PPI
MS.gene033440	MS.gene035261	PPI
MS.gene035261	MS.gene51207	PPI
MS.gene035261	MS.gene58321	PPI
MS.gene44886	MS.gene035261	PPI
MS.gene035261	MS.gene87564	PPI
MS.gene035261	MS.gene36595	PPI
MS.gene038756	MS.gene035261	PPI
MS.gene40904	MS.gene035261	PPI
MS.gene035261	MS.gene024004	PPI
MS.gene035261	MS.gene045140	PPI
MS.gene24286	MS.gene035261	PPI
MS.gene92376	MS.gene035261	PPI
MS.gene035261	MS.gene061240	PPI
MS.gene000035	MS.gene035261	PPI
MS.gene87569	MS.gene035261	PPI
MS.gene035261	MS.gene041473	PPI
MS.gene87573	MS.gene035261	PPI
MS.gene041491	MS.gene035261	PPI
MS.gene035261	MS.gene50311	PPI
MS.gene019504	MS.gene035261	PPI
MS.gene035261	MS.gene035234	PPI
MS.gene035261	MS.gene058989	PPI
MS.gene035261	MS.gene57538	PPI
MS.gene059096	MS.gene035261	PPI
MS.gene57528	MS.gene035261	PPI
MS.gene035261	MS.gene041468	PPI
MS.gene035261	MS.gene058693	PPI
MS.gene50297	MS.gene035261	PPI
MS.gene035261	MS.gene041395	PPI
MS.gene006711	MS.gene035261	PPI
MS.gene27285	MS.gene035261	PPI
MS.gene035261	MS.gene42447	PPI
MS.gene58716	MS.gene035261	PPI
MS.gene035261	MS.gene51189	PPI
MS.gene033444	MS.gene035261	PPI
MS.gene019505	MS.gene035261	PPI
MS.gene045476	MS.gene035261	PPI
MS.gene58785	MS.gene035261	PPI
MS.gene035261	MS.gene046958	PPI
MS.gene034690	MS.gene035261	PPI
MS.gene035261	MS.gene24286	PPI
MS.gene066639	MS.gene035261	PPI
MS.gene26949	MS.gene035261	PPI
MS.gene035261	MS.gene044425	PPI
MS.gene96407	MS.gene035261	PPI
MS.gene50309	MS.gene035261	PPI
MS.gene036760	MS.gene035261	PPI
MS.gene77857	MS.gene035261	PPI
MS.gene58311	MS.gene035261	PPI
MS.gene035261	MS.gene40988	PPI
MS.gene57527	MS.gene035261	PPI
MS.gene51191	MS.gene035261	PPI
MS.gene035261	MS.gene59637	PPI
MS.gene035261	MS.gene24173	PPI
MS.gene035261	MS.gene036662	PPI
MS.gene033426	MS.gene035261	PPI
MS.gene035261	MS.gene27022	PPI
MS.gene50298	MS.gene035261	PPI
MS.gene67687	MS.gene035261	PPI
MS.gene035261	MS.gene87585	PPI
MS.gene035261	MS.gene023999	PPI
MS.gene063670	MS.gene035261	PPI
MS.gene019506	MS.gene035261	PPI
MS.gene035261	MS.gene036581	PPI
MS.gene035261	MS.gene035237	PPI
MS.gene058692	MS.gene035261	PPI
MS.gene033083	MS.gene035261	PPI
MS.gene035261	MS.gene000036	PPI
MS.gene69309	MS.gene035261	PPI
MS.gene63658	MS.gene035261	PPI
MS.gene024002	MS.gene035261	PPI
MS.gene033081	MS.gene035261	PPI
MS.gene035261	MS.gene50320	PPI
MS.gene035261	MS.gene58314	PPI
MS.gene035261	MS.gene87557	PPI
MS.gene035261	MS.gene035263	PPI
MS.gene035262	MS.gene035261	PPI
MS.gene034686	MS.gene035261	PPI
MS.gene035261	MS.gene053257	PPI
MS.gene40982	MS.gene035261	PPI
MS.gene070461	MS.gene035261	PPI
MS.gene035261	MS.gene77858	PPI
MS.gene035261	MS.gene51201	PPI
MS.gene035261	MS.gene50336	PPI
MS.gene035261	MS.gene77704	PPI
MS.gene036662	MS.gene035261	PPI
MS.gene87563	MS.gene035261	PPI
MS.gene033431	MS.gene035261	PPI
MS.gene035261	MS.gene047279	PPI
MS.gene035261	MS.gene50305	PPI
MS.gene041475	MS.gene035261	PPI
MS.gene035261	MS.gene68890	PPI
MS.gene81242	MS.gene035261	PPI
MS.gene64203	MS.gene035261	PPI
MS.gene035261	MS.gene42445	PPI
MS.gene035261	MS.gene86273	PPI
MS.gene045140	MS.gene035261	PPI
MS.gene035261	MS.gene036663	PPI
MS.gene035261	MS.gene26830	PPI
MS.gene024004	MS.gene035261	PPI
MS.gene42444	MS.gene035261	PPI
MS.gene51202	MS.gene035261	PPI
MS.gene035261	MS.gene63657	PPI
MS.gene035261	MS.gene059157	PPI
MS.gene87562	MS.gene035261	PPI
MS.gene035261	MS.gene023996	PPI
MS.gene035261	MS.gene045473	PPI
MS.gene035261	MS.gene50301	PPI
MS.gene035261	MS.gene070462	PPI
MS.gene035261	MS.gene031590	PPI
MS.gene26829	MS.gene035261	PPI
MS.gene064104	MS.gene035261	PPI
MS.gene035261	MS.gene066623	PPI
MS.gene035261	MS.gene064086	PPI
MS.gene033443	MS.gene035261	PPI
MS.gene035261	MS.gene064090	PPI
MS.gene54049	MS.gene035261	PPI
MS.gene43789	MS.gene035261	PPI
MS.gene035261	MS.gene58317	PPI
MS.gene035261	MS.gene90742	PPI
MS.gene035261	MS.gene24212	PPI
MS.gene072177	MS.gene035261	PPI
MS.gene58722	MS.gene035261	PPI
MS.gene035261	MS.gene50332	PPI
MS.gene035261	MS.gene024979	PPI
MS.gene064091	MS.gene035261	PPI
MS.gene064112	MS.gene035261	PPI
MS.gene24208	MS.gene035261	PPI
MS.gene50307	MS.gene035261	PPI
MS.gene43796	MS.gene035261	PPI
MS.gene035261	MS.gene24826	PPI
MS.gene035261	MS.gene063472	PPI
MS.gene035261	MS.gene43790	PPI
MS.gene58312	MS.gene035261	PPI
MS.gene36704	MS.gene035261	PPI
MS.gene58313	MS.gene035261	PPI
MS.gene066622	MS.gene035261	PPI
MS.gene44887	MS.gene035261	PPI
MS.gene035261	MS.gene88416	PPI
MS.gene85043	MS.gene035261	PPI
MS.gene035261	MS.gene57530	PPI
MS.gene033430	MS.gene035261	PPI
MS.gene035261	MS.gene003076	PPI
MS.gene036583	MS.gene035261	PPI
MS.gene035261	MS.gene024009	PPI
MS.gene88780	MS.gene035261	PPI
MS.gene035261	MS.gene036599	PPI
MS.gene87588	MS.gene035261	PPI
MS.gene035261	MS.gene009892	PPI
MS.gene035261	MS.gene006705	PPI
MS.gene035261	MS.gene061241	PPI
MS.gene71159	MS.gene035261	PPI
MS.gene96448	MS.gene035261	PPI
MS.gene77858	MS.gene035261	PPI
MS.gene041392	MS.gene035261	PPI
MS.gene035261	MS.gene51188	PPI
MS.gene58317	MS.gene035261	PPI
MS.gene069075	MS.gene035261	PPI
MS.gene035261	MS.gene38220	PPI
MS.gene035261	MS.gene40986	PPI
MS.gene035261	MS.gene50309	PPI
MS.gene035261	MS.gene041394	PPI
MS.gene40985	MS.gene035261	PPI
MS.gene031591	MS.gene035261	PPI
MS.gene035261	MS.gene03060	PPI
MS.gene035261	MS.gene033440	PPI
MS.gene035261	MS.gene036664	PPI
MS.gene035261	MS.gene024011	PPI
MS.gene035261	MS.gene58241	PPI
MS.gene035261	MS.gene064109	PPI
MS.gene51199	MS.gene035261	PPI
MS.gene041388	MS.gene035261	PPI
MS.gene035261	MS.gene058696	PPI
MS.gene035261	MS.gene009893	PPI
MS.gene062698	MS.gene035261	PPI
MS.gene57536	MS.gene035261	PPI
MS.gene96126	MS.gene035261	PPI
MS.gene035261	MS.gene85043	PPI
MS.gene019503	MS.gene035261	PPI
MS.gene016524	MS.gene035261	PPI
MS.gene87559	MS.gene035261	PPI
MS.gene50304	MS.gene035261	PPI
MS.gene59943	MS.gene035261	PPI
MS.gene035261	MS.gene033083	PPI
MS.gene31587	MS.gene035261	PPI
MS.gene041393	MS.gene035261	PPI
MS.gene033441	MS.gene035261	PPI
MS.gene035261	MS.gene40886	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene035261.t1	MTR_4g118380	94.262	122	7	0	1	122	236	357	5.41e-81	243
MS.gene035261.t1	MTR_4g118400	73.427	143	17	1	1	143	173	294	2.33e-67	206
MS.gene035261.t1	MTR_6g060650	71.329	143	32	1	1	143	234	367	5.89e-66	204
MS.gene035261.t1	MTR_4g117720	67.347	147	34	2	2	143	234	371	2.97e-61	193
MS.gene035261.t1	MTR_3g103020	62.759	145	43	2	1	143	237	372	9.16e-55	176
MS.gene035261.t1	MTR_4g109280	62.676	142	41	3	1	140	219	350	4.72e-54	174
MS.gene035261.t1	MTR_4g109270	58.621	145	49	2	1	143	223	358	1.17e-49	162
MS.gene035261.t1	MTR_3g034180	59.441	143	48	2	1	143	351	483	1.38e-49	165
MS.gene035261.t1	MTR_3g034130	57.639	144	51	2	1	144	237	370	1.13e-48	160
MS.gene035261.t1	MTR_4g117850	59.859	142	45	3	2	140	239	371	1.53e-47	157
MS.gene035261.t1	MTR_4g122850	59.028	144	46	5	3	143	225	358	1.56e-46	155
MS.gene035261.t1	MTR_8g040935	55.479	146	52	3	2	143	66	202	5.14e-45	146
MS.gene035261.t1	MTR_4g094365	54.795	146	54	4	1	143	222	358	1.35e-44	149
MS.gene035261.t1	MTR_3g034160	58.741	143	49	2	1	143	237	369	3.20e-44	149
MS.gene035261.t1	MTR_5g097210	55.556	144	52	3	2	144	226	358	7.27e-44	148
MS.gene035261.t1	MTR_4g116330	53.793	145	54	3	3	143	239	374	7.39e-44	148
MS.gene035261.t1	MTR_4g116320	56.164	146	49	5	2	143	118	252	3.18e-43	143
MS.gene035261.t1	MTR_4g117870	61.789	123	45	2	22	143	140	261	3.16e-42	141
MS.gene035261.t1	MTR_1g055175	53.472	144	53	5	3	143	63	195	7.79e-42	138
MS.gene035261.t1	MTR_1g055195	53.147	143	58	3	1	143	339	472	3.63e-41	143
MS.gene035261.t1	MTR_4g118360	61.261	111	39	2	35	143	12	120	9.51e-41	132
MS.gene035261.t1	MTR_1g055165	53.472	144	53	5	3	143	180	312	1.94e-40	137
MS.gene035261.t1	MTR_4g023130	53.521	142	52	3	1	140	175	304	4.28e-40	136
MS.gene035261.t1	MTR_4g023090	48.408	157	56	4	2	143	232	378	1.22e-39	137
MS.gene035261.t1	MTR_4g118370	49.640	139	59	2	6	144	128	255	1.26e-39	134
MS.gene035261.t1	MTR_4g023380	46.951	164	54	3	3	143	218	371	1.49e-39	137
MS.gene035261.t1	MTR_1g055135	53.147	143	58	4	3	143	234	369	1.80e-39	136
MS.gene035261.t1	MTR_4g023080	52.817	142	53	4	1	140	216	345	3.70e-39	135
MS.gene035261.t1	MTR_8g433030	55.102	147	49	6	1	143	203	336	5.57e-39	134
MS.gene035261.t1	MTR_8g032390	55.102	147	49	6	1	143	236	369	1.06e-38	134
MS.gene035261.t1	MTR_8g433040	55.944	143	49	4	3	143	228	358	2.03e-38	133
MS.gene035261.t1	MTR_8g032380	55.944	143	49	4	3	143	228	358	2.03e-38	133
MS.gene035261.t1	MTR_4g117750	55.814	129	54	2	17	143	350	477	3.06e-38	135
MS.gene035261.t1	MTR_4g117750	52.113	142	64	2	3	144	217	354	5.44e-35	126
MS.gene035261.t1	MTR_5g070130	49.655	145	61	3	2	143	235	370	1.32e-36	129
MS.gene035261.t1	MTR_4g117770	49.306	144	65	2	2	143	224	361	1.25e-35	126
MS.gene035261.t1	MTR_4g117810	49.306	144	65	2	2	143	224	361	1.25e-35	126
MS.gene035261.t1	MTR_4g117780	48.611	144	66	2	2	143	224	361	2.05e-35	125
MS.gene035261.t1	MTR_4g021785	47.887	142	60	3	1	140	217	346	3.65e-35	125
MS.gene035261.t1	MTR_5g070080	51.034	145	59	3	1	143	245	379	6.95e-35	124
MS.gene035261.t1	MTR_4g023070	47.403	154	57	4	1	140	218	361	1.39e-34	124
MS.gene035261.t1	MTR_4g023190	50.000	148	59	6	1	143	216	353	5.95e-34	121
MS.gene035261.t1	MTR_4g023120	47.742	155	55	5	1	140	218	361	9.23e-34	121
MS.gene035261.t1	MTR_5g070088	46.897	145	67	2	1	143	243	379	8.69e-33	119
MS.gene035261.t1	MTR_1g055250	50.000	140	53	6	4	141	133	257	1.11e-32	117
MS.gene035261.t1	MTR_5g023000	61.798	89	34	0	55	143	5	93	1.18e-32	111
MS.gene035261.t1	MTR_4g023150	48.649	148	61	6	1	143	217	354	2.06e-32	117
MS.gene035261.t1	MTR_8g102520	45.139	144	69	4	1	143	182	316	2.43e-31	114
MS.gene035261.t1	MTR_6g463430	48.611	144	57	5	3	143	67	196	3.18e-31	110
MS.gene035261.t1	MTR_4g023440	48.760	121	49	2	23	143	219	326	6.39e-31	113
MS.gene035261.t1	MTR_4g023200	47.297	148	63	6	1	143	217	354	1.04e-30	113
MS.gene035261.t1	MTR_7g079450	45.833	144	64	4	1	143	1	131	1.32e-30	107
MS.gene035261.t1	MTR_4g122860	50.000	122	52	3	28	143	196	314	2.99e-30	111
MS.gene035261.t1	MTR_4g116330	54.206	107	45	2	41	143	229	335	9.58e-29	107
MS.gene035261.t1	MTR_7g079400	42.177	147	71	3	2	143	194	331	1.13e-28	107
MS.gene035261.t1	MTR_7g079370	45.833	144	67	3	1	143	217	350	3.78e-27	103
MS.gene035261.t1	MTR_4g117530	40.000	135	74	2	9	143	120	247	3.73e-26	99.4
MS.gene035261.t1	MTR_4g114700	54.167	96	37	2	51	139	122	217	2.36e-25	97.1
MS.gene035261.t1	MTR_7g079420	42.466	146	69	6	2	143	1004	1138	1.19e-24	99.0
MS.gene035261.t1	MTR_8g098830	43.333	120	58	3	1	120	87	196	8.00e-24	92.8
MS.gene035261.t1	MTR_7g117720	53.684	95	40	2	54	144	178	272	1.26e-22	90.5
MS.gene035261.t1	MTR_4g121580	42.105	133	56	5	10	140	227	340	2.56e-19	82.8
MS.gene035261.t1	MTR_2g048580	38.667	150	60	10	2	143	211	336	1.93e-15	72.0
MS.gene035261.t1	MTR_8g013005	62.264	53	20	0	91	143	1	53	4.32e-15	65.5
MS.gene035261.t1	MTR_4g023430	46.667	75	37	1	72	143	142	216	1.84e-13	65.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 27 sgRNAs with CRISPR-Local

Find 34 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGGATGATATAGTTGAAATA+TGG	0.254965	8.1:+9323836	MS.gene035261:CDS
GGTTGTGATTTGTGGGTATT+TGG	0.288331	8.1:+9323787	MS.gene035261:CDS
GGCTATGTATACAGAGTCTT+TGG	0.303429	8.1:+9324071	MS.gene035261:CDS
TGTGCGATTCTCTTTATAAT+AGG	0.305240	8.1:-9324040	None:intergenic
TTGGTGAGTTTCTCAGTGTA+TGG	0.351491	8.1:+9323806	MS.gene035261:CDS
AACCTACAGGTTGTGATTTG+TGG	0.451176	8.1:+9323779	MS.gene035261:CDS
ATTGGAACTGATGGTGAAGT+TGG	0.456865	8.1:+9323973	MS.gene035261:CDS
TTTCCTTTCAATTAAATCAA+AGG	0.478785	8.1:-9323692	None:intergenic
GGATGATATAGTTGAAATAT+GGG	0.480581	8.1:+9323837	MS.gene035261:CDS
TTGCCTTTGATTTAATTGAA+AGG	0.515684	8.1:+9323689	MS.gene035261:CDS
ACCTACAGGTTGTGATTTGT+GGG	0.529599	8.1:+9323780	MS.gene035261:CDS
GCGATTCTCTTTATAATAGG+AGG	0.531668	8.1:-9324037	None:intergenic
TTGGTGAAGTATGATGAAAA+AGG	0.538205	8.1:+9323997	MS.gene035261:CDS
CTCTGTATACATAGCCACTT+GGG	0.543827	8.1:-9324064	None:intergenic
AACTGATGGTGAAGTTGGAT+TGG	0.547756	8.1:+9323978	MS.gene035261:CDS
TAAACTTGTTCGCTATCACC+GGG	0.548745	8.1:-9324103	None:intergenic
TCTCAGTGTATGGACTAAGC+AGG	0.562084	8.1:+9323816	MS.gene035261:CDS
ACTCTGTATACATAGCCACT+TGG	0.572904	8.1:-9324065	None:intergenic
GGTGATATTATTGGAACTGA+TGG	0.578976	8.1:+9323964	MS.gene035261:CDS
AGTACCAAGTGCATTCGTCA+TGG	0.586111	8.1:+9323869	MS.gene035261:CDS
TAGTCCATGACGAATGCACT+TGG	0.621108	8.1:-9323873	None:intergenic
ATTGGAGCGAAGTAATGAGT+GGG	0.631785	8.1:-9323925	None:intergenic
TATTGGAGCGAAGTAATGAG+TGG	0.644959	8.1:-9323926	None:intergenic
GGTTCATGTTCAAAATCACC+TGG	0.645701	8.1:-9323760	None:intergenic
AAACTTGTTCGCTATCACCG+GGG	0.668208	8.1:-9324102	None:intergenic
AGAGAATCGCACATCCCAAG+TGG	0.670773	8.1:+9324050	MS.gene035261:CDS
ACCCACAAATCACAACCTGT+AGG	0.682592	8.1:-9323781	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTTCCTTTCAATTAAATCAA+AGG	-	chr8.1:9323695-9323714	None:intergenic	20.0%
!	ACAAAAAGTGGTGATATTAT+TGG	+	chr8.1:9323955-9323974	MS.gene035261:CDS	25.0%
!	AGGATGATATAGTTGAAATA+TGG	+	chr8.1:9323836-9323855	MS.gene035261:CDS	25.0%
!	GGATGATATAGTTGAAATAT+GGG	+	chr8.1:9323837-9323856	MS.gene035261:CDS	25.0%
!!	TTGCCTTTGATTTAATTGAA+AGG	+	chr8.1:9323689-9323708	MS.gene035261:CDS	25.0%
	CCAATATGTAGTACAAAAAG+TGG	+	chr8.1:9323943-9323962	MS.gene035261:CDS	30.0%
	TGTGCGATTCTCTTTATAAT+AGG	-	chr8.1:9324043-9324062	None:intergenic	30.0%
	TTGGTGAAGTATGATGAAAA+AGG	+	chr8.1:9323997-9324016	MS.gene035261:CDS	30.0%
!!!	CCACTTTTTGTACTACATAT+TGG	-	chr8.1:9323946-9323965	None:intergenic	30.0%
	GCGATTCTCTTTATAATAGG+AGG	-	chr8.1:9324040-9324059	None:intergenic	35.0%
	GGTGATATTATTGGAACTGA+TGG	+	chr8.1:9323964-9323983	MS.gene035261:CDS	35.0%
!	GATTTTGAACATGAACCTAC+AGG	+	chr8.1:9323766-9323785	MS.gene035261:CDS	35.0%
!!!	CTTTGCCAGATGATCTTTTT+TGG	+	chr8.1:9323728-9323747	MS.gene035261:CDS	35.0%
	AACCTACAGGTTGTGATTTG+TGG	+	chr8.1:9323779-9323798	MS.gene035261:CDS	40.0%
	ACTCTGTATACATAGCCACT+TGG	-	chr8.1:9324068-9324087	None:intergenic	40.0%
	ATTGGAGCGAAGTAATGAGT+GGG	-	chr8.1:9323928-9323947	None:intergenic	40.0%
	CCTCTCCAAAAAAGATCATC+TGG	-	chr8.1:9323736-9323755	None:intergenic	40.0%
	CTCTGTATACATAGCCACTT+GGG	-	chr8.1:9324067-9324086	None:intergenic	40.0%
	GGCTATGTATACAGAGTCTT+TGG	+	chr8.1:9324071-9324090	MS.gene035261:CDS	40.0%
	GGTTCATGTTCAAAATCACC+TGG	-	chr8.1:9323763-9323782	None:intergenic	40.0%
	TATTGGAGCGAAGTAATGAG+TGG	-	chr8.1:9323929-9323948	None:intergenic	40.0%
	TTGGTGAGTTTCTCAGTGTA+TGG	+	chr8.1:9323806-9323825	MS.gene035261:CDS	40.0%
!	AACTGATGGTGAAGTTGGAT+TGG	+	chr8.1:9323978-9323997	MS.gene035261:CDS	40.0%
!	ACCTACAGGTTGTGATTTGT+GGG	+	chr8.1:9323780-9323799	MS.gene035261:CDS	40.0%
!	ATTGGAACTGATGGTGAAGT+TGG	+	chr8.1:9323973-9323992	MS.gene035261:CDS	40.0%
!	GGTTGTGATTTGTGGGTATT+TGG	+	chr8.1:9323787-9323806	MS.gene035261:CDS	40.0%
!!!	CCAGATGATCTTTTTTGGAG+AGG	+	chr8.1:9323733-9323752	MS.gene035261:CDS	40.0%
	ACCCACAAATCACAACCTGT+AGG	-	chr8.1:9323784-9323803	None:intergenic	45.0%
	AGTACCAAGTGCATTCGTCA+TGG	+	chr8.1:9323869-9323888	MS.gene035261:CDS	45.0%
	TAGTCCATGACGAATGCACT+TGG	-	chr8.1:9323876-9323895	None:intergenic	45.0%
!	TCTCAGTGTATGGACTAAGC+AGG	+	chr8.1:9323816-9323835	MS.gene035261:CDS	45.0%
!!!	AGTCTTTGGTTTTCACTCCC+CGG	+	chr8.1:9324085-9324104	MS.gene035261:CDS	45.0%
!!!	CTTTTTTGGAGAGGTTTGCC+AGG	+	chr8.1:9323742-9323761	MS.gene035261:CDS	45.0%
	AGAGAATCGCACATCCCAAG+TGG	+	chr8.1:9324050-9324069	MS.gene035261:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	9323676	9324110	9323676	ID=MS.gene035261
chr8.1	mRNA	9323676	9324110	9323676	ID=MS.gene035261.t1;Parent=MS.gene035261
chr8.1	exon	9323676	9324110	9323676	ID=MS.gene035261.t1.exon1;Parent=MS.gene035261.t1
chr8.1	CDS	9323676	9324110	9323676	ID=cds.MS.gene035261.t1;Parent=MS.gene035261.t1

Gene Sequence

>MS.gene035261

ATGAATGTTATTGTTGCCTTTGATTTAATTGAAAGGAAACTTTTAGACATATCTTTGCCAGATGATCTTTTTTGGAGAGGTTTGCCAGGTGATTTTGAACATGAACCTACAGGTTGTGATTTGTGGGTATTTGGTGAGTTTCTCAGTGTATGGACTAAGCAGGATGATATAGTTGAAATATGGGTGATGAAAGAGTACCAAGTGCATTCGTCATGGACTAAGACTCTTGTTTTTTCAATTGATGTCATTCCCACTCATTACTTCGCTCCAATATGTAGTACAAAAAGTGGTGATATTATTGGAACTGATGGTGAAGTTGGATTGGTGAAGTATGATGAAAAAGGACAGTTTCTAGAGTATACCTCCTATTATAAAGAGAATCGCACATCCCAAGTGGCTATGTATACAGAGTCTTTGGTTTTCACTCCCCGGTGA

Protein sequence

>MS.gene035261.t1

MNVIVAFDLIERKLLDISLPDDLFWRGLPGDFEHEPTGCDLWVFGEFLSVWTKQDDIVEIWVMKEYQVHSSWTKTLVFSIDVIPTHYFAPICSTKSGDIIGTDGEVGLVKYDEKGQFLEYTSYYKENRTSQVAMYTESLVFTPR