AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene069075


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069075.t1 MTR_4g116330 80.418 383 68 3 7 388 4 380 0.0 602
MS.gene069075.t1 MTR_4g116330 71.540 383 63 4 7 388 4 341 0.0 512
MS.gene069075.t1 MTR_3g103020 54.145 386 157 9 9 388 7 378 5.90e-125 365
MS.gene069075.t1 MTR_4g117850 55.080 374 141 11 22 385 20 376 1.99e-121 356
MS.gene069075.t1 MTR_4g023080 53.846 377 142 12 15 385 1 351 6.89e-120 352
MS.gene069075.t1 MTR_4g109280 55.135 370 146 8 23 388 6 359 1.24e-116 343
MS.gene069075.t1 MTR_4g023090 51.908 393 153 12 16 387 8 385 2.12e-116 344
MS.gene069075.t1 MTR_4g021785 52.660 376 155 8 15 388 1 355 3.09e-115 340
MS.gene069075.t1 MTR_4g094365 51.459 377 160 10 20 388 3 364 1.91e-114 338
MS.gene069075.t1 MTR_3g034180 52.030 394 158 12 10 387 110 488 7.47e-113 338
MS.gene069075.t1 MTR_4g023130 51.596 376 111 10 15 385 1 310 3.14e-112 330
MS.gene069075.t1 MTR_4g109270 51.444 381 144 10 25 388 8 364 1.30e-111 331
MS.gene069075.t1 MTR_4g023070 49.474 380 158 11 25 385 3 367 1.44e-110 328
MS.gene069075.t1 MTR_6g060650 53.476 374 160 7 22 387 5 372 5.97e-109 324
MS.gene069075.t1 MTR_4g023120 50.000 380 156 13 25 385 3 367 8.37e-109 324
MS.gene069075.t1 MTR_3g034130 51.639 366 149 10 15 364 1 354 2.73e-107 320
MS.gene069075.t1 MTR_3g034160 51.414 389 158 12 15 387 1 374 5.29e-107 320
MS.gene069075.t1 MTR_4g117780 50.785 382 165 12 15 388 1 367 5.85e-105 314
MS.gene069075.t1 MTR_4g117770 51.429 385 158 12 15 388 1 367 1.28e-103 311
MS.gene069075.t1 MTR_4g117810 51.429 385 158 12 15 388 1 367 1.28e-103 311
MS.gene069075.t1 MTR_4g122850 50.820 366 154 14 36 388 12 364 4.34e-102 307
MS.gene069075.t1 MTR_4g023440 48.031 381 132 10 16 388 10 332 1.43e-99 299
MS.gene069075.t1 MTR_4g023150 49.738 382 157 15 14 385 1 357 6.25e-98 296
MS.gene069075.t1 MTR_4g023200 50.785 382 153 15 14 385 1 357 2.73e-97 294
MS.gene069075.t1 MTR_5g070088 47.165 388 168 13 24 385 6 382 7.56e-97 294
MS.gene069075.t1 MTR_8g433040 46.770 387 165 13 13 388 8 364 2.02e-96 292
MS.gene069075.t1 MTR_8g032380 46.770 387 165 13 13 388 8 364 2.02e-96 292
MS.gene069075.t1 MTR_4g023380 48.395 405 144 14 16 388 8 379 2.11e-96 293
MS.gene069075.t1 MTR_5g070080 47.619 399 154 15 24 388 9 386 8.74e-96 291
MS.gene069075.t1 MTR_4g023190 49.738 382 156 15 14 385 1 356 9.06e-96 290
MS.gene069075.t1 MTR_4g117720 46.787 389 146 12 14 388 37 378 2.13e-95 290
MS.gene069075.t1 MTR_4g118380 51.261 357 151 9 22 359 5 357 8.00e-95 288
MS.gene069075.t1 MTR_5g070130 47.423 388 179 14 15 388 1 377 1.81e-93 285
MS.gene069075.t1 MTR_5g097210 46.719 381 174 12 15 386 1 361 1.84e-92 282
MS.gene069075.t1 MTR_8g032390 45.078 386 164 12 7 383 24 370 9.56e-91 278
MS.gene069075.t1 MTR_1g055135 44.072 388 186 14 16 388 4 375 4.28e-89 274
MS.gene069075.t1 MTR_4g116320 63.426 216 73 2 175 386 43 256 8.25e-86 261
MS.gene069075.t1 MTR_4g117750 46.950 377 161 12 24 384 2 355 1.02e-82 261
MS.gene069075.t1 MTR_4g117750 59.091 110 43 1 276 385 373 480 1.91e-30 122
MS.gene069075.t1 MTR_4g121580 45.119 379 153 14 15 378 1 339 5.22e-81 253
MS.gene069075.t1 MTR_8g013010 52.174 276 111 8 24 291 53 315 2.36e-79 247
MS.gene069075.t1 MTR_4g116340 55.769 260 82 6 1 251 12 247 1.34e-78 242
MS.gene069075.t1 MTR_1g055165 41.444 374 160 12 17 388 2 318 3.01e-76 239
MS.gene069075.t1 MTR_4g117870 48.669 263 94 8 129 388 43 267 2.38e-68 217
MS.gene069075.t1 MTR_8g040935 54.822 197 86 2 195 388 12 208 3.65e-65 206
MS.gene069075.t1 MTR_1g055195 43.793 290 134 9 109 388 208 478 7.59e-62 206
MS.gene069075.t1 MTR_4g118400 42.756 283 115 9 105 381 52 293 9.12e-61 198
MS.gene069075.t1 MTR_8g433030 50.222 225 102 6 164 383 118 337 9.50e-59 194
MS.gene069075.t1 MTR_8g433030 63.077 65 21 2 7 71 24 85 3.13e-15 76.6
MS.gene069075.t1 MTR_7g079370 40.000 350 172 12 54 381 16 349 1.77e-58 194
MS.gene069075.t1 MTR_6g463430 53.125 192 81 4 196 385 15 199 7.25e-57 185
MS.gene069075.t1 MTR_4g118370 46.000 250 100 9 145 385 34 257 3.01e-55 182
MS.gene069075.t1 MTR_8g102520 37.143 385 169 14 14 388 1 322 3.67e-54 182
MS.gene069075.t1 MTR_4g114700 41.729 266 97 7 124 379 1 218 6.46e-52 173
MS.gene069075.t1 MTR_2g048580 33.773 379 194 14 24 388 7 342 1.60e-50 173
MS.gene069075.t1 MTR_7g079400 41.971 274 139 9 129 388 70 337 1.43e-47 165
MS.gene069075.t1 MTR_4g117530 41.892 222 86 4 169 388 73 253 5.20e-47 161
MS.gene069075.t1 MTR_7g117720 35.040 371 136 14 15 381 1 270 4.12e-43 151
MS.gene069075.t1 MTR_1g055175 43.350 203 106 6 191 388 3 201 1.84e-42 147
MS.gene069075.t1 MTR_1g055250 41.379 232 115 10 140 360 21 242 1.26e-40 146
MS.gene069075.t1 MTR_4g117430 50.633 158 70 4 132 287 3 154 5.04e-40 139
MS.gene069075.t1 MTR_7g079420 38.489 278 113 13 131 388 905 1144 2.79e-37 144
MS.gene069075.t1 MTR_4g122860 42.188 192 78 5 202 388 157 320 4.78e-35 132
MS.gene069075.t1 MTR_4g122860 30.723 166 104 5 11 173 56 213 4.75e-11 63.9
MS.gene069075.t1 MTR_4g118360 52.308 130 56 3 261 388 1 126 7.66e-32 117
MS.gene069075.t1 MTR_5g023000 60.000 100 38 1 289 388 2 99 3.34e-31 114
MS.gene069075.t1 MTR_5g022420 30.178 338 202 15 24 349 26 341 2.72e-30 120
MS.gene069075.t1 MTR_4g107820 28.723 376 222 16 25 380 36 385 9.69e-29 115
MS.gene069075.t1 MTR_4g107780 28.723 376 222 16 25 380 36 385 9.69e-29 115
MS.gene069075.t1 MTR_4g107820 28.723 376 222 16 25 380 36 385 1.15e-28 116
MS.gene069075.t1 MTR_4g107780 28.723 376 222 16 25 380 36 385 1.15e-28 116
MS.gene069075.t1 MTR_8g098830 40.217 184 95 7 182 355 16 194 3.02e-28 110
MS.gene069075.t1 MTR_3g009310 29.180 305 182 11 25 315 42 326 1.96e-27 112
MS.gene069075.t1 MTR_4g109290 42.286 175 55 6 17 186 2 135 6.28e-27 106
MS.gene069075.t1 MTR_4g109290 61.818 55 19 1 334 388 136 188 2.36e-12 65.5
MS.gene069075.t1 MTR_1g056710 27.427 412 245 16 1 381 1 389 1.05e-26 110
MS.gene069075.t1 MTR_8g101580 26.757 370 237 13 25 380 45 394 1.49e-26 110
MS.gene069075.t1 MTR_4g133170 28.530 347 202 18 25 349 4 326 2.78e-26 108
MS.gene069075.t1 MTR_5g011200 28.402 338 206 15 1 325 1 315 3.54e-26 108
MS.gene069075.t1 MTR_3g007360 27.778 378 220 16 28 381 55 403 5.22e-26 108
MS.gene069075.t1 MTR_2g024110 28.205 312 173 14 25 311 4 289 8.39e-26 107
MS.gene069075.t1 MTR_6g090180 25.971 412 252 11 12 381 34 434 1.43e-25 107
MS.gene069075.t1 MTR_4g108820 29.043 303 167 11 21 321 38 294 2.13e-25 105
MS.gene069075.t1 MTR_2g426020 27.720 386 232 15 25 379 6 375 2.42e-25 106
MS.gene069075.t1 MTR_1g097490 28.184 369 233 14 21 380 45 390 3.78e-25 105
MS.gene069075.t1 MTR_1g097330 30.488 328 195 14 25 339 16 323 1.61e-24 104
MS.gene069075.t1 MTR_3g036290 28.904 301 175 14 25 315 22 293 2.22e-24 103
MS.gene069075.t1 MTR_3g007410 26.984 378 223 16 28 381 55 403 3.77e-24 103
MS.gene069075.t1 MTR_3g030250 25.641 390 244 15 7 380 20 379 9.01e-24 102
MS.gene069075.t1 MTR_3g072470 28.706 425 202 21 28 380 22 417 9.84e-24 102
MS.gene069075.t1 MTR_2g021150 26.075 372 252 15 24 384 13 372 1.36e-23 101
MS.gene069075.t1 MTR_6g021880 27.198 364 233 13 36 380 31 381 1.48e-23 101
MS.gene069075.t1 MTR_2g047832 27.371 369 211 19 24 354 28 377 1.86e-23 101
MS.gene069075.t1 MTR_3g009240 30.897 301 170 13 25 311 36 312 2.42e-23 100
MS.gene069075.t1 MTR_8g467140 27.419 310 196 11 24 321 31 323 2.71e-23 99.8
MS.gene069075.t1 MTR_2g028160 28.371 356 213 14 25 347 5 351 3.09e-23 100
MS.gene069075.t1 MTR_1g068835 26.178 382 226 16 25 380 4 355 3.92e-23 100
MS.gene069075.t1 MTR_1g094210 26.437 348 217 15 22 355 54 376 4.30e-23 100
MS.gene069075.t1 MTR_6g027910 27.110 391 225 15 25 380 9 374 7.38e-23 99.4
MS.gene069075.t1 MTR_1g094210 26.005 373 234 16 22 380 54 398 7.46e-23 99.4
MS.gene069075.t1 MTR_3g006500 27.273 385 232 18 18 380 11 369 9.57e-23 99.0
MS.gene069075.t1 MTR_2g055970 26.966 356 237 14 9 354 196 538 9.69e-23 100
MS.gene069075.t1 MTR_3g006670 28.477 302 183 11 25 311 49 332 9.84e-23 99.4
MS.gene069075.t1 MTR_5g069120 36.702 188 91 6 35 205 1 177 1.49e-22 94.0
MS.gene069075.t1 MTR_4g030830 25.063 399 242 13 25 380 9 393 1.97e-22 98.2
MS.gene069075.t1 MTR_1g054725 25.773 388 245 15 16 380 8 375 2.36e-22 97.8
MS.gene069075.t1 MTR_2g046900 28.291 357 211 17 24 354 27 364 2.65e-22 97.8
MS.gene069075.t1 MTR_3g036430 28.904 301 170 10 19 316 15 274 4.61e-22 96.7
MS.gene069075.t1 MTR_7g013590 27.321 377 243 13 28 388 39 400 4.90e-22 97.1
MS.gene069075.t1 MTR_6g004660 27.974 311 184 11 25 311 16 310 6.22e-22 96.7
MS.gene069075.t1 MTR_4g028510 26.098 410 245 16 16 383 7 400 6.40e-22 97.4
MS.gene069075.t1 MTR_3g083640 29.139 302 183 14 25 316 55 335 6.98e-22 96.7
MS.gene069075.t1 MTR_6g034720 47.458 118 53 2 155 263 53 170 7.51e-22 93.2
MS.gene069075.t1 MTR_2g021190 25.532 376 236 14 25 380 21 372 9.45e-22 95.9
MS.gene069075.t1 MTR_3g011120 26.648 349 220 14 23 349 12 346 1.30e-21 95.5
MS.gene069075.t1 MTR_7g079450 44.366 142 72 4 247 388 3 137 1.88e-21 89.7
MS.gene069075.t1 MTR_2g104340 25.598 418 247 16 10 385 1 396 2.01e-21 95.5
MS.gene069075.t1 MTR_3g007330 27.907 301 186 10 25 315 48 327 2.51e-21 95.1
MS.gene069075.t1 MTR_2g028140 27.692 325 185 16 25 311 5 317 2.82e-21 95.1
MS.gene069075.t1 MTR_2g021155 30.164 305 182 15 25 316 36 322 3.21e-21 96.3
MS.gene069075.t1 MTR_6g065980 27.778 288 186 10 25 311 16 282 3.55e-21 94.4
MS.gene069075.t1 MTR_3g014540 26.115 314 184 12 25 316 29 316 4.72e-21 94.0
MS.gene069075.t1 MTR_5g057710 30.032 313 171 15 25 316 46 331 5.22e-21 94.0
MS.gene069075.t1 MTR_4g061340 28.438 320 170 16 25 315 26 315 5.29e-21 94.0
MS.gene069075.t1 MTR_1g097560 28.080 349 204 18 23 354 34 352 5.93e-21 93.6
MS.gene069075.t1 MTR_0667s0010 25.556 360 214 14 25 351 6 344 6.47e-21 94.0
MS.gene069075.t1 MTR_7g407070 26.923 338 214 13 25 337 32 361 6.48e-21 94.0
MS.gene069075.t1 MTR_2g078900 26.974 304 188 12 25 316 33 314 7.28e-21 93.2
MS.gene069075.t1 MTR_2g021770 24.878 410 259 16 18 385 5 407 7.84e-21 93.6
MS.gene069075.t1 MTR_2g028130 26.515 396 220 19 25 378 5 371 8.56e-21 93.6
MS.gene069075.t1 MTR_5g057790 29.299 314 172 13 25 316 46 331 1.01e-20 93.2
MS.gene069075.t1 MTR_3g010620 28.923 325 190 16 3 316 12 306 1.02e-20 93.2
MS.gene069075.t1 MTR_1g068875 26.790 377 227 17 25 379 4 353 1.09e-20 93.2
MS.gene069075.t1 MTR_2g046920 26.163 344 227 12 24 354 23 352 1.14e-20 92.8
MS.gene069075.t1 MTR_0054s0090 27.143 420 239 19 15 383 1 404 1.21e-20 93.2
MS.gene069075.t1 MTR_7g070880 26.139 417 240 15 21 381 17 421 1.52e-20 93.2
MS.gene069075.t1 MTR_3g013770 27.358 318 179 12 25 316 33 324 1.63e-20 92.8
MS.gene069075.t1 MTR_2g029990 26.558 369 239 16 26 380 52 402 2.00e-20 92.4
MS.gene069075.t1 MTR_3g464500 25.479 365 220 14 24 351 26 375 2.16e-20 92.4
MS.gene069075.t1 MTR_2g021050 26.963 382 218 19 25 387 5 344 2.35e-20 92.0
MS.gene069075.t1 MTR_7g057270 29.231 325 180 15 25 313 26 336 2.74e-20 92.4
MS.gene069075.t1 MTR_7g007300 27.124 306 186 12 25 319 103 382 3.27e-20 92.4
MS.gene069075.t1 MTR_3g010390 25.824 364 230 13 25 360 33 384 3.42e-20 91.7
MS.gene069075.t1 MTR_3g010590 25.326 383 223 15 25 380 39 385 5.03e-20 91.3
MS.gene069075.t1 MTR_3g024150 27.793 367 232 15 28 380 38 385 5.69e-20 90.9
MS.gene069075.t1 MTR_1g068860 27.760 317 176 14 25 315 4 293 5.77e-20 90.9
MS.gene069075.t1 MTR_8g012090 26.087 345 190 15 33 349 24 331 7.44e-20 90.1
MS.gene069075.t1 MTR_3g096250 26.027 365 195 14 25 380 47 345 7.56e-20 90.1
MS.gene069075.t1 MTR_4g023430 40.496 121 59 2 281 388 102 222 7.85e-20 87.8
MS.gene069075.t1 MTR_4g023430 64.706 68 21 2 4 71 22 86 5.34e-18 82.4
MS.gene069075.t1 MTR_3g011060 27.747 364 225 17 25 364 28 377 8.29e-20 90.5
MS.gene069075.t1 MTR_3g083010 26.817 399 238 15 25 380 6 393 9.33e-20 90.5
MS.gene069075.t1 MTR_3g023930 26.667 405 228 17 2 380 6 367 1.18e-19 89.7
MS.gene069075.t1 MTR_4g117550 26.250 400 215 19 24 385 16 373 1.30e-19 89.7
MS.gene069075.t1 MTR_8g099460 26.912 353 202 15 25 345 5 333 1.94e-19 89.7
MS.gene069075.t1 MTR_4g037465 26.992 389 216 15 16 360 12 376 2.29e-19 89.4
MS.gene069075.t1 MTR_1g088120 26.972 393 209 18 22 357 7 378 2.33e-19 89.4
MS.gene069075.t1 MTR_4g028660 26.796 362 208 16 16 336 7 352 2.34e-19 89.4
MS.gene069075.t1 MTR_4g027450 26.796 362 208 16 16 336 7 352 2.34e-19 89.4
MS.gene069075.t1 MTR_3g014570 25.566 309 190 12 25 315 29 315 2.35e-19 89.4
MS.gene069075.t1 MTR_1g055055 24.620 329 202 13 1 317 1 295 2.46e-19 88.6
MS.gene069075.t1 MTR_7g055930 27.123 424 229 16 25 380 13 424 2.55e-19 89.4
MS.gene069075.t1 MTR_0129s0050 25.120 418 235 16 24 385 13 408 2.61e-19 89.4
MS.gene069075.t1 MTR_7g055870 27.725 422 229 17 25 380 13 424 2.97e-19 89.4
MS.gene069075.t1 MTR_3g013740 27.729 339 205 14 2 316 21 343 3.03e-19 89.0
MS.gene069075.t1 MTR_0707s0020 25.227 440 241 19 15 379 16 442 4.45e-19 89.0
MS.gene069075.t1 MTR_3g010970 28.618 304 169 14 28 316 51 321 4.66e-19 88.6
MS.gene069075.t1 MTR_2g021252 25.373 335 212 13 28 351 50 357 4.92e-19 88.2
MS.gene069075.t1 MTR_4g055060 26.688 311 189 11 25 315 30 321 5.05e-19 88.2
MS.gene069075.t1 MTR_8g464770 25.515 388 237 17 24 381 11 376 5.17e-19 88.2
MS.gene069075.t1 MTR_3g010870 26.688 311 178 13 25 316 37 316 5.80e-19 88.2
MS.gene069075.t1 MTR_0128s0070 28.226 372 198 18 25 351 22 369 6.34e-19 88.2
MS.gene069075.t1 MTR_4g024890 23.737 396 243 14 24 380 9 384 7.47e-19 87.8
MS.gene069075.t1 MTR_7g028660 27.219 338 197 11 22 328 8 327 9.62e-19 87.4
MS.gene069075.t1 MTR_6g007135 27.128 376 242 16 25 380 26 389 9.93e-19 87.4
MS.gene069075.t1 MTR_2g025420 25.000 404 238 18 25 380 6 392 1.24e-18 87.4
MS.gene069075.t1 MTR_7g061060 27.500 320 189 12 19 311 7 310 1.27e-18 87.0
MS.gene069075.t1 MTR_3g006570 27.362 307 187 14 25 316 21 306 1.30e-18 87.0
MS.gene069075.t1 MTR_2g426070 27.451 357 213 15 26 349 7 350 1.44e-18 87.0
MS.gene069075.t1 MTR_3g030240 25.532 376 222 17 25 380 40 377 1.71e-18 86.7
MS.gene069075.t1 MTR_4g031770 25.879 313 191 11 25 319 4 293 2.19e-18 86.3
MS.gene069075.t1 MTR_5g059430 26.379 417 239 19 24 386 25 427 2.37e-18 86.7
MS.gene069075.t1 MTR_4g070550 26.957 345 192 15 25 325 5 333 2.49e-18 86.3
MS.gene069075.t1 MTR_2g025960 28.772 285 163 13 130 379 6 285 2.65e-18 85.1
MS.gene069075.t1 MTR_3g010920 27.407 405 226 19 2 380 19 381 2.92e-18 85.9
MS.gene069075.t1 MTR_3g007430 27.508 309 177 13 28 315 46 328 2.96e-18 85.9
MS.gene069075.t1 MTR_4g013175 24.874 398 226 13 22 357 7 393 3.40e-18 86.3
MS.gene069075.t1 MTR_7g066030 25.564 399 219 17 3 349 2 374 3.57e-18 85.9
MS.gene069075.t1 MTR_2g046830 28.115 313 201 13 24 327 24 321 3.83e-18 85.9
MS.gene069075.t1 MTR_4g122840 40.580 138 44 4 252 388 164 264 3.91e-18 84.0
MS.gene069075.t1 MTR_7g056003 29.305 331 175 16 21 313 11 320 4.01e-18 85.9
MS.gene069075.t1 MTR_7g069550 27.644 416 222 22 10 374 1 388 4.12e-18 85.5
MS.gene069075.t1 MTR_0128s0020 28.721 383 210 21 12 351 4 366 4.41e-18 85.5
MS.gene069075.t1 MTR_7g091640 24.932 365 217 13 1 323 1 350 4.91e-18 85.1
MS.gene069075.t1 MTR_5g057690 28.526 312 167 14 25 316 46 321 5.04e-18 85.1
MS.gene069075.t1 MTR_0054s0100 25.298 419 250 17 12 383 4 406 5.72e-18 85.5
MS.gene069075.t1 MTR_4g013185 26.810 373 208 13 22 337 7 371 6.05e-18 85.5
MS.gene069075.t1 MTR_7g070830 25.359 418 244 16 20 381 16 421 6.17e-18 85.5
MS.gene069075.t1 MTR_0129s0070 24.808 391 247 14 28 385 20 396 6.52e-18 85.1
MS.gene069075.t1 MTR_1g050542 23.433 367 250 12 25 380 58 404 7.16e-18 85.1
MS.gene069075.t1 MTR_3g436150 27.348 362 231 15 25 364 32 383 7.45e-18 84.7
MS.gene069075.t1 MTR_6g053240 27.070 314 187 14 25 316 28 321 7.47e-18 85.1
MS.gene069075.t1 MTR_1g055070 28.520 277 168 12 25 278 49 318 8.15e-18 84.7
MS.gene069075.t1 MTR_0267s0050 26.273 373 227 14 20 356 2 362 8.15e-18 84.7
MS.gene069075.t1 MTR_8g039500 26.316 342 219 12 24 345 11 339 1.12e-17 84.0
MS.gene069075.t1 MTR_7g060940 27.296 392 233 16 22 379 19 392 1.13e-17 84.3
MS.gene069075.t1 MTR_1g115160 25.890 309 200 13 20 320 17 304 1.30e-17 84.0
MS.gene069075.t1 MTR_0097s0030 25.253 396 234 14 25 380 14 387 1.30e-17 84.0
MS.gene069075.t1 MTR_2g047240 25.253 396 234 14 25 380 14 387 1.30e-17 84.0
MS.gene069075.t1 MTR_2g426090 27.187 320 183 16 28 315 9 310 1.33e-17 84.3
MS.gene069075.t1 MTR_3g010430 26.000 350 184 17 10 316 6 323 1.46e-17 84.3
MS.gene069075.t1 MTR_2g425980 26.667 390 232 17 25 379 5 375 1.47e-17 84.0
MS.gene069075.t1 MTR_2g022000 25.401 374 214 14 24 342 15 378 1.51e-17 84.3
MS.gene069075.t1 MTR_5g069390 27.251 422 235 24 24 386 25 433 1.61e-17 84.3
MS.gene069075.t1 MTR_2g028110 27.445 317 181 14 25 315 4 297 1.65e-17 83.6
MS.gene069075.t1 MTR_4g130330 26.980 404 231 20 24 383 6 389 1.72e-17 83.6
MS.gene069075.t1 MTR_4g013180 27.812 320 187 12 24 313 10 315 2.07e-17 84.0
MS.gene069075.t1 MTR_5g010550 28.000 425 227 21 25 388 58 464 2.20e-17 84.0
MS.gene069075.t1 MTR_5g010550 28.000 425 227 21 25 388 44 450 2.24e-17 84.0
MS.gene069075.t1 MTR_7g061050 26.970 330 197 12 19 322 7 318 2.37e-17 83.2
MS.gene069075.t1 MTR_2g021800 25.481 416 234 19 24 381 15 412 2.58e-17 83.6
MS.gene069075.t1 MTR_3g030330 26.829 328 184 15 11 316 4 297 2.82e-17 82.8
MS.gene069075.t1 MTR_2g078850 27.687 307 179 13 28 316 33 314 3.05e-17 82.8
MS.gene069075.t1 MTR_7g060960 28.107 338 174 15 22 335 29 321 3.48e-17 82.8
MS.gene069075.t1 MTR_7g017040 24.356 427 230 18 13 381 3 394 3.49e-17 82.8
MS.gene069075.t1 MTR_5g010610 28.369 423 223 22 25 388 34 435 3.77e-17 83.6
MS.gene069075.t1 MTR_3g011100 26.129 310 183 12 25 311 235 521 4.20e-17 83.6
MS.gene069075.t1 MTR_5g072060 28.022 364 208 17 24 356 5 345 4.21e-17 83.6
MS.gene069075.t1 MTR_0044s0300 26.974 304 189 12 25 316 38 320 5.13e-17 82.4
MS.gene069075.t1 MTR_4g028750 28.060 335 192 13 15 311 6 329 5.34e-17 82.4
MS.gene069075.t1 MTR_7g091630 26.036 338 195 13 24 323 31 351 6.70e-17 82.4
MS.gene069075.t1 MTR_0760s0010 27.491 291 188 12 30 316 52 323 6.78e-17 82.0
MS.gene069075.t1 MTR_1g061330 24.615 390 232 17 25 385 4 360 7.60e-17 81.6
MS.gene069075.t1 MTR_7g056820 26.203 374 221 18 19 357 2 355 8.05e-17 81.6
MS.gene069075.t1 MTR_5g010560 28.538 424 222 22 25 388 44 446 8.28e-17 82.0
MS.gene069075.t1 MTR_1g054575 27.907 301 188 14 25 316 52 332 8.59e-17 82.4
MS.gene069075.t1 MTR_2g031680 25.301 332 202 14 25 334 6 313 9.21e-17 81.6
MS.gene069075.t1 MTR_5g022045 25.553 407 250 16 25 387 35 432 1.06e-16 81.6
MS.gene069075.t1 MTR_7g066840 26.431 367 222 16 25 357 23 375 1.11e-16 81.3
MS.gene069075.t1 MTR_1g114700 26.752 314 190 11 25 319 29 321 1.38e-16 80.9
MS.gene069075.t1 MTR_3g030350 27.342 395 209 21 25 380 35 390 1.40e-16 80.9
MS.gene069075.t1 MTR_7g062060 27.861 402 234 20 24 381 11 400 1.46e-16 80.9
MS.gene069075.t1 MTR_4g028680 26.462 359 214 14 16 336 7 353 1.48e-16 80.9
MS.gene069075.t1 MTR_1g115185 25.449 334 215 8 2 319 15 330 2.02e-16 80.5
MS.gene069075.t1 MTR_7g055987 29.450 309 172 15 28 313 23 308 2.22e-16 80.1
MS.gene069075.t1 MTR_3g437520 26.355 406 207 21 28 360 26 412 2.37e-16 80.9
MS.gene069075.t1 MTR_8g063440 25.707 389 238 16 24 381 11 379 2.45e-16 80.1
MS.gene069075.t1 MTR_0464s0020 26.588 425 228 19 25 382 23 430 2.49e-16 80.5
MS.gene069075.t1 MTR_7g070440 26.462 325 193 13 24 321 6 311 2.50e-16 80.1
MS.gene069075.t1 MTR_7g061090 27.019 322 190 13 24 311 21 331 2.73e-16 80.1
MS.gene069075.t1 MTR_8g073550 31.373 204 117 8 24 216 29 220 2.97e-16 77.8
MS.gene069075.t1 MTR_7g016930 25.360 347 173 18 10 312 1 305 3.82e-16 79.3
MS.gene069075.t1 MTR_6g016285 25.463 432 245 16 8 380 4 417 4.20e-16 80.1
MS.gene069075.t1 MTR_7g056290 24.706 425 219 18 28 380 25 420 4.74e-16 79.7
MS.gene069075.t1 MTR_7g056760 26.456 412 245 19 12 380 8 404 4.85e-16 79.7
MS.gene069075.t1 MTR_8g032980 23.543 446 226 19 16 381 7 417 4.87e-16 79.7
MS.gene069075.t1 MTR_0115s0020 24.433 397 253 17 25 383 10 397 5.42e-16 79.3
MS.gene069075.t1 MTR_3g007300 27.614 373 198 16 25 380 49 366 5.98e-16 79.0
MS.gene069075.t1 MTR_2g461450 23.513 353 230 10 25 356 18 351 6.03e-16 79.0
MS.gene069075.t1 MTR_5g096910 25.558 403 230 18 24 383 16 391 6.22e-16 79.0
MS.gene069075.t1 MTR_5g057020 28.571 308 167 15 25 316 46 316 6.29e-16 78.6
MS.gene069075.t1 MTR_1g058190 25.484 310 182 8 24 319 34 308 6.34e-16 79.0
MS.gene069075.t1 MTR_0064s0160 27.434 339 204 17 23 326 40 371 6.40e-16 79.3
MS.gene069075.t1 MTR_6g048140 26.225 347 190 15 25 337 39 353 6.60e-16 79.0
MS.gene069075.t1 MTR_2g026010 27.586 319 178 14 25 315 4 297 8.47e-16 78.6
MS.gene069075.t1 MTR_4g030090 26.970 330 190 14 15 311 4 315 9.18e-16 78.6
MS.gene069075.t1 MTR_5g008530 71.930 57 14 2 25 81 18 72 9.32e-16 72.0
MS.gene069075.t1 MTR_3g013950 24.742 388 236 14 28 377 9 378 9.53e-16 78.6
MS.gene069075.t1 MTR_2g047892 22.938 388 235 14 11 355 6 372 1.27e-15 78.2
MS.gene069075.t1 MTR_5g046300 21.958 378 242 13 25 380 4 350 1.31e-15 77.8
MS.gene069075.t1 MTR_5g046290 21.958 378 242 13 25 380 4 350 1.31e-15 77.8
MS.gene069075.t1 MTR_7g055977 27.340 406 217 17 24 381 6 381 1.33e-15 78.2
MS.gene069075.t1 MTR_0831s0010 26.273 373 220 15 18 356 43 394 1.48e-15 78.2
MS.gene069075.t1 MTR_5g048160 25.187 401 240 20 25 381 4 388 2.16e-15 77.4
MS.gene069075.t1 MTR_3g036335 26.202 416 233 22 2 380 16 394 2.40e-15 77.4
MS.gene069075.t1 MTR_0129s0120 25.405 370 201 16 28 349 20 362 3.29e-15 77.0
MS.gene069075.t1 MTR_7g067680 25.253 396 229 18 1 372 24 376 3.33e-15 77.0
MS.gene069075.t1 MTR_4g080200 25.000 372 207 16 25 361 3 337 3.35e-15 76.6
MS.gene069075.t1 MTR_1g112930 27.451 306 189 11 22 316 22 305 3.76e-15 76.6
MS.gene069075.t1 MTR_7g078860 25.344 363 228 14 19 347 3 356 3.84e-15 76.6
MS.gene069075.t1 MTR_2g034700 25.749 334 208 15 24 336 13 327 4.50e-15 76.3
MS.gene069075.t1 MTR_2g043400 28.704 324 173 16 28 313 26 329 4.93e-15 76.6
MS.gene069075.t1 MTR_5g021880 26.513 347 188 15 25 311 39 378 4.96e-15 76.6
MS.gene069075.t1 MTR_5g021880 26.513 347 188 15 25 311 39 378 6.17e-15 76.6
MS.gene069075.t1 MTR_7g079640 24.211 380 240 16 10 364 1 357 6.94e-15 75.9
MS.gene069075.t1 MTR_3g009260 27.869 305 171 14 25 311 41 314 7.07e-15 75.9
MS.gene069075.t1 MTR_2g031720 25.445 393 233 20 25 385 6 370 7.68e-15 75.9
MS.gene069075.t1 MTR_5g021880 26.513 347 188 15 25 311 39 378 7.77e-15 76.3
MS.gene069075.t1 MTR_3g011020 27.244 312 178 13 25 318 28 308 7.85e-15 75.5
MS.gene069075.t1 MTR_2g426060 26.567 335 193 17 25 325 6 321 8.47e-15 75.9
MS.gene069075.t1 MTR_7g066010 24.352 386 187 16 24 358 20 351 9.32e-15 75.5
MS.gene069075.t1 MTR_3g080370 25.349 430 244 16 10 380 6 417 9.95e-15 75.9
MS.gene069075.t1 MTR_2g043410 27.744 328 171 14 28 313 25 328 1.05e-14 75.5
MS.gene069075.t1 MTR_6g048120 24.561 399 237 16 22 380 33 407 1.11e-14 75.5
MS.gene069075.t1 MTR_3g010520 25.649 308 185 14 18 316 19 291 1.15e-14 75.1
MS.gene069075.t1 MTR_4g033495 27.083 336 195 17 22 321 24 345 1.38e-14 75.5
MS.gene069075.t1 MTR_8g062660 23.529 391 232 17 25 380 22 380 1.41e-14 75.9
MS.gene069075.t1 MTR_4g129190 25.542 415 221 19 25 381 6 390 1.63e-14 74.7
MS.gene069075.t1 MTR_7g056503 25.313 399 254 20 16 380 9 397 1.67e-14 74.7
MS.gene069075.t1 MTR_8g013005 58.333 60 21 2 330 388 3 59 1.72e-14 68.2
MS.gene069075.t1 MTR_2g047200 25.791 411 219 19 22 380 17 393 1.89e-14 74.7
MS.gene069075.t1 MTR_2g047878 25.064 391 228 17 17 380 11 363 1.93e-14 74.3
MS.gene069075.t1 MTR_3g024040 27.596 366 217 18 32 380 38 372 2.09e-14 74.3
MS.gene069075.t1 MTR_6g013270 23.718 312 215 10 19 319 23 322 2.15e-14 74.3
MS.gene069075.t1 MTR_2g104280 24.819 415 237 17 24 385 13 405 2.39e-14 74.3
MS.gene069075.t1 MTR_7g017130 26.087 414 245 18 12 385 5 397 5.15e-14 73.2
MS.gene069075.t1 MTR_4g008790 26.260 377 196 14 22 337 36 391 7.21e-14 73.2
MS.gene069075.t1 MTR_4g055820 25.600 375 212 18 10 336 1 356 7.47e-14 72.8
MS.gene069075.t1 MTR_4g102410 24.934 377 226 18 24 356 60 423 7.60e-14 73.2
MS.gene069075.t1 MTR_7g017170 26.366 421 247 19 12 385 5 409 8.94e-14 72.8
MS.gene069075.t1 MTR_5g096630 26.449 276 159 10 25 264 18 285 9.89e-14 72.4
MS.gene069075.t1 MTR_8g046200 25.770 357 201 14 16 315 7 356 1.08e-13 72.4
MS.gene069075.t1 MTR_6g046320 25.706 354 198 14 25 323 39 382 1.18e-13 72.4
MS.gene069075.t1 MTR_6g017280 25.127 394 242 17 25 380 9 387 1.21e-13 72.0
MS.gene069075.t1 MTR_2g046800 26.524 328 192 15 25 316 14 328 1.52e-13 72.0
MS.gene069075.t1 MTR_1g007450 25.691 362 217 11 25 347 12 360 1.87e-13 71.6
MS.gene069075.t1 MTR_7g056200 26.648 349 186 15 24 337 22 335 2.01e-13 71.6
MS.gene069075.t1 MTR_5g068040 27.044 318 177 11 22 313 13 301 2.08e-13 71.2
MS.gene069075.t1 MTR_5g069930 24.277 346 214 14 24 337 5 334 2.21e-13 71.2
MS.gene069075.t1 MTR_1g037540 25.538 325 196 12 28 311 8 327 2.64e-13 71.2
MS.gene069075.t1 MTR_2g010920 22.917 432 269 16 4 380 2 424 3.11e-13 71.2
MS.gene069075.t1 MTR_8g066440 25.253 396 243 17 25 382 23 403 3.28e-13 70.9
MS.gene069075.t1 MTR_7g061010 25.888 394 230 17 22 379 19 386 4.78e-13 70.5
MS.gene069075.t1 MTR_1g055375 24.595 309 201 12 28 319 7 300 5.21e-13 70.1
MS.gene069075.t1 MTR_6g004210 24.471 331 199 12 36 326 36 355 5.22e-13 70.5
MS.gene069075.t1 MTR_5g046260 22.992 361 206 13 25 380 4 297 5.33e-13 69.3
MS.gene069075.t1 MTR_3g010440 26.190 294 140 12 25 311 26 249 5.82e-13 69.7
MS.gene069075.t1 MTR_7g066100 24.198 405 240 17 24 381 10 394 6.21e-13 70.1
MS.gene069075.t1 MTR_0649s0020 25.666 413 234 17 15 380 1 387 9.63e-13 69.3
MS.gene069075.t1 MTR_4g030110 23.467 375 214 14 25 356 30 374 1.07e-12 69.3
MS.gene069075.t1 MTR_6g055210 24.847 326 203 13 24 318 21 335 1.14e-12 69.3
MS.gene069075.t1 MTR_3g058470 25.298 336 183 14 25 337 37 327 1.21e-12 68.9
MS.gene069075.t1 MTR_1g055200 42.574 101 45 4 124 213 1 99 1.26e-12 64.3
MS.gene069075.t1 MTR_5g096900 24.242 297 192 11 14 285 1 289 1.31e-12 68.6
MS.gene069075.t1 MTR_1g009110 26.575 365 211 17 23 355 12 351 1.33e-12 68.9
MS.gene069075.t1 MTR_7g056710 26.471 306 196 11 22 311 15 307 1.36e-12 68.9
MS.gene069075.t1 MTR_5g022090 28.076 317 152 16 25 312 34 303 1.57e-12 68.9
MS.gene069075.t1 MTR_1g442850 25.938 320 183 15 24 311 4 301 1.58e-12 68.6
MS.gene069075.t1 MTR_7g077970 25.449 334 202 14 25 320 7 331 1.92e-12 68.6
MS.gene069075.t1 MTR_4g030760 24.377 361 218 15 25 356 73 407 2.07e-12 68.6
MS.gene069075.t1 MTR_3g058480 28.114 281 156 14 25 279 39 299 2.18e-12 67.8
MS.gene069075.t1 MTR_5g024260 25.272 368 208 17 15 336 12 358 2.42e-12 68.2
MS.gene069075.t1 MTR_8g041270 23.131 428 244 16 16 385 6 406 2.55e-12 68.2
MS.gene069075.t1 MTR_2g010950 22.738 409 265 12 12 380 7 404 2.61e-12 68.2
MS.gene069075.t1 MTR_7g078840 25.648 347 191 15 22 313 7 341 3.11e-12 68.2
MS.gene069075.t1 MTR_4g019990 23.014 365 221 14 24 344 5 353 3.50e-12 67.8
MS.gene069075.t1 MTR_7g050480 27.331 311 184 13 24 311 21 312 3.68e-12 67.8
MS.gene069075.t1 MTR_2g066170 23.650 389 253 16 24 383 11 384 4.67e-12 67.4
MS.gene069075.t1 MTR_4g023100 55.172 58 22 1 330 387 65 118 5.08e-12 62.8
MS.gene069075.t1 MTR_7g050520 26.730 318 177 14 24 311 21 312 5.89e-12 67.0
MS.gene069075.t1 MTR_5g057643 29.218 243 131 10 25 248 46 266 8.35e-12 65.5
MS.gene069075.t1 MTR_2g010900 24.127 315 190 12 43 322 1 301 1.15e-11 66.2
MS.gene069075.t1 MTR_5g096710 29.022 317 176 14 25 311 23 320 1.46e-11 65.9
MS.gene069075.t1 MTR_5g086590 24.885 217 140 9 143 345 14 221 1.50e-11 64.3
MS.gene069075.t1 MTR_5g023570 38.655 119 56 5 23 139 35 138 1.51e-11 62.4
MS.gene069075.t1 MTR_7g052670 25.121 414 244 19 24 380 20 424 2.01e-11 65.5
MS.gene069075.t1 MTR_0242s0060 27.523 327 192 15 22 313 6 322 2.56e-11 65.1
MS.gene069075.t1 MTR_0242s0040 27.523 327 192 15 22 313 6 322 2.56e-11 65.1
MS.gene069075.t1 MTR_7g055830 26.623 308 167 13 129 383 58 359 2.57e-11 65.1
MS.gene069075.t1 MTR_7g056797 26.100 341 190 12 15 309 1 325 2.86e-11 65.1
MS.gene069075.t1 MTR_1g097370 28.750 160 99 7 171 320 135 289 2.86e-11 65.1
MS.gene069075.t1 MTR_1g055145 42.553 94 49 4 28 120 36 125 3.24e-11 63.9
MS.gene069075.t1 MTR_1g055145 45.333 75 39 2 228 302 130 202 4.48e-11 63.5
MS.gene069075.t1 MTR_5g027370 22.549 306 209 10 29 313 33 331 5.41e-11 64.3
MS.gene069075.t1 MTR_8g013000 23.743 358 210 13 24 336 9 348 5.43e-11 64.3
MS.gene069075.t1 MTR_3g096280 25.168 298 170 11 37 319 17 276 6.83e-11 63.5
MS.gene069075.t1 MTR_5g027330 22.549 306 209 10 29 313 44 342 7.73e-11 63.9
MS.gene069075.t1 MTR_0134s0060 21.560 436 250 18 14 383 1 410 8.47e-11 63.5
MS.gene069075.t1 MTR_6g088385 24.254 268 163 10 145 379 57 317 9.56e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069075.t1 AT4G12560 29.747 316 181 14 25 315 4 303 1.69e-29 118
MS.gene069075.t1 AT4G12560 29.747 316 181 14 25 315 4 303 1.69e-29 118
MS.gene069075.t1 AT4G12560 29.747 316 181 14 25 315 4 303 1.69e-29 118
MS.gene069075.t1 AT3G06240 27.342 395 237 14 25 380 36 419 9.17e-29 116
MS.gene069075.t1 AT4G22390 28.643 398 221 20 26 388 5 374 2.45e-25 106
MS.gene069075.t1 AT4G22390 28.643 398 221 20 26 388 5 374 3.19e-25 106
MS.gene069075.t1 AT3G16210 28.383 303 179 16 21 317 1 271 6.37e-21 93.6
MS.gene069075.t1 AT2G27520 25.641 390 205 16 25 381 6 343 9.11e-17 81.3
MS.gene069075.t1 AT3G49980 24.765 319 213 11 25 332 5 307 5.33e-14 73.2
MS.gene069075.t1 AT3G49980 24.765 319 213 11 25 332 6 308 6.79e-14 72.8
MS.gene069075.t1 AT3G10430 27.426 237 144 9 25 253 5 221 5.54e-13 70.1
MS.gene069075.t1 AT3G18330 25.559 313 195 12 25 317 6 300 1.27e-12 68.9
MS.gene069075.t1 AT1G30790 24.051 316 205 10 24 317 8 310 5.02e-12 67.4
MS.gene069075.t1 AT3G44120 26.299 308 194 15 25 315 6 297 1.25e-11 66.2
MS.gene069075.t1 AT3G52320 23.871 310 204 14 25 321 27 317 1.75e-11 65.5
MS.gene069075.t1 AT1G47790 24.793 242 167 7 25 264 25 253 3.40e-11 64.7
MS.gene069075.t1 AT3G18910 23.585 318 207 13 20 317 3 304 5.28e-11 64.3
MS.gene069075.t1 AT5G50220 23.837 344 203 16 2 337 10 302 6.99e-11 63.5

Find 71 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAATTGCATTTGATTTAA+TGG 0.100322 7.4:-58876028 MS.gene069075:CDS
TTGGAGAATTTCTCAGTTTA+TGG 0.111007 7.4:-58875933 MS.gene069075:CDS
AATAGTTTCAGTTATCTTTA+TGG 0.111808 7.4:-58876279 MS.gene069075:CDS
AATATTAATTTGTGGGTATT+TGG 0.124164 7.4:-58875952 MS.gene069075:CDS
TTCAGTTATCTTTATGGATT+TGG 0.171450 7.4:-58876273 MS.gene069075:CDS
TGTAGACCATATTGGGTAAA+AGG 0.239812 7.4:+58875798 None:intergenic
ACGACACCCACTTGTAAAAT+TGG 0.258753 7.4:-58876759 MS.gene069075:CDS
ATAGTTGGGTCACTCTTTAA+TGG 0.271301 7.4:-58876096 MS.gene069075:CDS
ACTCTTGTTCTTCCTATTGA+TGG 0.297614 7.4:-58875835 MS.gene069075:CDS
TTCTAGAGCATGGATCATTC+TGG 0.318847 7.4:-58875708 MS.gene069075:CDS
CCACTTGTAAAATTGGAAAA+AGG 0.324725 7.4:-58876752 MS.gene069075:CDS
TGGAGAATTTCTCAGTTTAT+GGG 0.329245 7.4:-58875932 MS.gene069075:CDS
CACTATTCTGATCACATAGT+TGG 0.336098 7.4:-58876111 MS.gene069075:CDS
TCAGTTATCTTTATGGATTT+GGG 0.339373 7.4:-58876272 MS.gene069075:CDS
CTAATGAAAGAGTTGAAATA+TGG 0.341411 7.4:-58875897 MS.gene069075:CDS
TGTTTGTAAACTCCAGTTGA+TGG 0.347916 7.4:+58876327 None:intergenic
TCAAATTCTGCTGAGGTTGC+GGG 0.354361 7.4:-58876676 MS.gene069075:CDS
AAATCAAATGCAATTATAAC+TGG 0.362309 7.4:+58876033 None:intergenic
AATTAATATTATTAGTTGAA+TGG 0.363713 7.4:+58875965 None:intergenic
TTCAAATTCTGCTGAGGTTG+CGG 0.371997 7.4:-58876677 MS.gene069075:CDS
CTGAAACTATTTGAATCATT+AGG 0.373771 7.4:+58876291 None:intergenic
AACTAATAATATTAATTTGT+GGG 0.376387 7.4:-58875959 MS.gene069075:CDS
TCTTTAATGGAGCTATTCAT+TGG 0.379072 7.4:-58876083 MS.gene069075:CDS
TCAGAATAGTGAAGAACATA+TGG 0.391022 7.4:+58876123 None:intergenic
AATACAATGTTCATTCATCT+TGG 0.393910 7.4:-58875864 MS.gene069075:CDS
TGGGACGGTCCACTTCCATT+TGG 0.399776 7.4:-58875688 MS.gene069075:CDS
TAATGGGTTGTTCGCATTTG+AGG 0.407758 7.4:-58876197 MS.gene069075:CDS
GTTTAATAAAATTAGGGATC+GGG 0.411705 7.4:+58876451 None:intergenic
ATCTTTAGATTGTGAAGCAT+TGG 0.413376 7.4:-58876505 MS.gene069075:CDS
TCAAATGTGTTTGTAAGCCT+TGG 0.424516 7.4:-58876635 MS.gene069075:CDS
ATCATATGGAATCCATCAAC+TGG 0.425958 7.4:-58876339 MS.gene069075:CDS
GAGTCTTTGCTTTCACTCAC+TGG 0.430576 7.4:-58875643 MS.gene069075:CDS
TAATGGAGCTATTCATTGGT+TGG 0.434950 7.4:-58876079 MS.gene069075:CDS
TTTCATTGAGAGATAATACT+TGG 0.452810 7.4:-58876170 MS.gene069075:CDS
CAACTAATAATATTAATTTG+TGG 0.463413 7.4:-58875960 MS.gene069075:CDS
AGAGTCGAAATGCCATCAAT+AGG 0.468438 7.4:+58875823 None:intergenic
ATAAAATTAGGGATCGGGTT+GGG 0.473520 7.4:+58876456 None:intergenic
GGATTCCATATGATGAGGTC+TGG 0.483549 7.4:+58876348 None:intergenic
ACTATTCTGATCACATAGTT+GGG 0.493088 7.4:-58876110 MS.gene069075:CDS
TCTAGAGCATGGATCATTCT+GGG 0.494151 7.4:-58875707 MS.gene069075:CDS
GGTTTAATAAAATTAGGGAT+CGG 0.497757 7.4:+58876450 None:intergenic
ACTCTATATACACGATCACT+TGG 0.503050 7.4:+58875662 None:intergenic
TTGCATTTGATTTAATGGAT+CGG 0.521838 7.4:-58876023 MS.gene069075:CDS
ACGATCACTTGGGATCCAAA+TGG 0.522188 7.4:+58875673 None:intergenic
GGCGACATTGTTGGAAGAGA+CGG 0.526076 7.4:-58875769 MS.gene069075:CDS
AATAAAATTAGGGATCGGGT+TGG 0.528236 7.4:+58876455 None:intergenic
ACTTGGGATCCAAATGGAAG+TGG 0.547144 7.4:+58875679 None:intergenic
ATTAAGAGATGATTGCTTGG+TGG 0.552616 7.4:-58876241 MS.gene069075:CDS
AATACTTGGAAAGAACTTGA+GGG 0.569131 7.4:-58876156 MS.gene069075:CDS
CAATCTAAAGATAGTGTAGT+CGG 0.577331 7.4:+58876516 None:intergenic
TAATACTTGGAAAGAACTTG+AGG 0.578194 7.4:-58876157 MS.gene069075:CDS
TCAATTAAGAGATGATTGCT+TGG 0.584358 7.4:-58876244 MS.gene069075:CDS
ACAAATTCAAGTTCGTGTAG+AGG 0.585550 7.4:-58876393 MS.gene069075:CDS
TTTGAATCATTAGGAGACAA+AGG 0.589171 7.4:+58876300 None:intergenic
TCCACAACATTAAAATCACA+TGG 0.589633 7.4:+58876426 None:intergenic
CACAACATTAAAATCACATG+GGG 0.591367 7.4:+58876428 None:intergenic
TGATAGTTCAAATTCTGCTG+AGG 0.593840 7.4:-58876683 MS.gene069075:CDS
AGAGGACAACTTCTAGAGCA+TGG 0.593949 7.4:-58875718 MS.gene069075:CDS
CCACAACATTAAAATCACAT+GGG 0.594686 7.4:+58876427 None:intergenic
TAATGAAAGAGTTGAAATAT+GGG 0.595340 7.4:-58875896 MS.gene069075:CDS
AAATGCGAATTTGCAAAGTG+AGG 0.616345 7.4:+58876591 None:intergenic
CTCTATATACACGATCACTT+GGG 0.616976 7.4:+58875663 None:intergenic
CAGAATAGTGAAGAACATAT+GGG 0.630586 7.4:+58876124 None:intergenic
ATTTGAACTATCAATTCATG+AGG 0.639280 7.4:+58876693 None:intergenic
GAGCATGGATCATTCTGGGA+CGG 0.652794 7.4:-58875703 MS.gene069075:CDS
TTGATGGATTCCATATGATG+AGG 0.658732 7.4:+58876343 None:intergenic
TTACTGAAGTATAATGACAG+AGG 0.710690 7.4:-58875736 MS.gene069075:CDS
AATTCATGAGGTAGATACCG+CGG 0.711119 7.4:+58876705 None:intergenic
TTAGAGATAAGAGAAAACCA+AGG 0.720239 7.4:+58876618 None:intergenic
ACAACATTAAAATCACATGG+GGG 0.756417 7.4:+58876429 None:intergenic
AGAAGAAGACGAATCTACCG+CGG 0.774632 7.4:-58876722 MS.gene069075:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATATTATTAGTTGAA+TGG + chr7.4:58876430-58876449 None:intergenic 10.0%
!!! AACTAATAATATTAATTTGT+GGG - chr7.4:58876433-58876452 MS.gene069075:CDS 10.0%
!! TTAACATCCAAAAAATTAAT+GGG - chr7.4:58876179-58876198 MS.gene069075:CDS 15.0%
!! TTTAACATCCAAAAAATTAA+TGG - chr7.4:58876178-58876197 MS.gene069075:CDS 15.0%
!!! CAACTAATAATATTAATTTG+TGG - chr7.4:58876432-58876451 MS.gene069075:CDS 15.0%
!!! TATAATTGCATTTGATTTAA+TGG - chr7.4:58876364-58876383 MS.gene069075:CDS 15.0%
!! AAATCAAATGCAATTATAAC+TGG + chr7.4:58876362-58876381 None:intergenic 20.0%
!! AATAGTTTCAGTTATCTTTA+TGG - chr7.4:58876113-58876132 MS.gene069075:CDS 20.0%
!! TAATGAAAGAGTTGAAATAT+GGG - chr7.4:58876496-58876515 MS.gene069075:CDS 20.0%
!!! AATATTAATTTGTGGGTATT+TGG - chr7.4:58876440-58876459 MS.gene069075:CDS 20.0%
! AATACAATGTTCATTCATCT+TGG - chr7.4:58876528-58876547 MS.gene069075:CDS 25.0%
! ATGGGGGTTTAATAAAATTA+GGG + chr7.4:58875950-58875969 None:intergenic 25.0%
! ATTTGAACTATCAATTCATG+AGG + chr7.4:58875702-58875721 None:intergenic 25.0%
! CTAATGAAAGAGTTGAAATA+TGG - chr7.4:58876495-58876514 MS.gene069075:CDS 25.0%
! CTGAAACTATTTGAATCATT+AGG + chr7.4:58876104-58876123 None:intergenic 25.0%
! GGTTTAATAAAATTAGGGAT+CGG + chr7.4:58875945-58875964 None:intergenic 25.0%
! GTTTAATAAAATTAGGGATC+GGG + chr7.4:58875944-58875963 None:intergenic 25.0%
! TCAGTTATCTTTATGGATTT+GGG - chr7.4:58876120-58876139 MS.gene069075:CDS 25.0%
! TTCAGTTATCTTTATGGATT+TGG - chr7.4:58876119-58876138 MS.gene069075:CDS 25.0%
! TTTCATTGAGAGATAATACT+TGG - chr7.4:58876222-58876241 MS.gene069075:CDS 25.0%
!! CTTTTTCCAATTTTACAAGT+GGG + chr7.4:58875642-58875661 None:intergenic 25.0%
!! TTGCATTTGATTTAATGGAT+CGG - chr7.4:58876369-58876388 MS.gene069075:CDS 25.0%
!!! CATTTTTTGTAGACCATATT+GGG + chr7.4:58876604-58876623 None:intergenic 25.0%
AATACTTGGAAAGAACTTGA+GGG - chr7.4:58876236-58876255 MS.gene069075:CDS 30.0%
ACAACATTAAAATCACATGG+GGG + chr7.4:58875966-58875985 None:intergenic 30.0%
ACTATTCTGATCACATAGTT+GGG - chr7.4:58876282-58876301 MS.gene069075:CDS 30.0%
ATCTTTAGATTGTGAAGCAT+TGG - chr7.4:58875887-58875906 MS.gene069075:CDS 30.0%
CAATCTAAAGATAGTGTAGT+CGG + chr7.4:58875879-58875898 None:intergenic 30.0%
CACAACATTAAAATCACATG+GGG + chr7.4:58875967-58875986 None:intergenic 30.0%
CAGAATAGTGAAGAACATAT+GGG + chr7.4:58876271-58876290 None:intergenic 30.0%
CATGGGGGTTTAATAAAATT+AGG + chr7.4:58875951-58875970 None:intergenic 30.0%
CCAATATGGTCTACAAAAAA+TGG - chr7.4:58876602-58876621 MS.gene069075:CDS 30.0%
CCACAACATTAAAATCACAT+GGG + chr7.4:58875968-58875987 None:intergenic 30.0%
CCACTTGTAAAATTGGAAAA+AGG - chr7.4:58875640-58875659 MS.gene069075:CDS 30.0%
TAATACTTGGAAAGAACTTG+AGG - chr7.4:58876235-58876254 MS.gene069075:CDS 30.0%
TCAATTAAGAGATGATTGCT+TGG - chr7.4:58876148-58876167 MS.gene069075:CDS 30.0%
TCAGAATAGTGAAGAACATA+TGG + chr7.4:58876272-58876291 None:intergenic 30.0%
TCCACAACATTAAAATCACA+TGG + chr7.4:58875969-58875988 None:intergenic 30.0%
TCTTTAATGGAGCTATTCAT+TGG - chr7.4:58876309-58876328 MS.gene069075:CDS 30.0%
TGGAGAATTTCTCAGTTTAT+GGG - chr7.4:58876460-58876479 MS.gene069075:CDS 30.0%
TTACTGAAGTATAATGACAG+AGG - chr7.4:58876656-58876675 MS.gene069075:CDS 30.0%
TTAGAGATAAGAGAAAACCA+AGG + chr7.4:58875777-58875796 None:intergenic 30.0%
TTGGAGAATTTCTCAGTTTA+TGG - chr7.4:58876459-58876478 MS.gene069075:CDS 30.0%
TTTGAATCATTAGGAGACAA+AGG + chr7.4:58876095-58876114 None:intergenic 30.0%
! CCTTTTTCCAATTTTACAAG+TGG + chr7.4:58875643-58875662 None:intergenic 30.0%
! TTTTTCGTCGTGATATAAAG+AGG - chr7.4:58876336-58876355 MS.gene069075:CDS 30.0%
!!! CCATTTTTTGTAGACCATAT+TGG + chr7.4:58876605-58876624 None:intergenic 30.0%
!!! CGAACAACCCATTAATTTTT+TGG + chr7.4:58876189-58876208 None:intergenic 30.0%
AAATGCGAATTTGCAAAGTG+AGG + chr7.4:58875804-58875823 None:intergenic 35.0%
AATAAAATTAGGGATCGGGT+TGG + chr7.4:58875940-58875959 None:intergenic 35.0%
ACAAAAAATGGCGACATTGT+TGG - chr7.4:58876614-58876633 MS.gene069075:CDS 35.0%
ACTCTATATACACGATCACT+TGG + chr7.4:58876733-58876752 None:intergenic 35.0%
ACTCTTGTTCTTCCTATTGA+TGG - chr7.4:58876557-58876576 MS.gene069075:CDS 35.0%
ATAAAATTAGGGATCGGGTT+GGG + chr7.4:58875939-58875958 None:intergenic 35.0%
ATAGTTGGGTCACTCTTTAA+TGG - chr7.4:58876296-58876315 MS.gene069075:CDS 35.0%
ATCATATGGAATCCATCAAC+TGG - chr7.4:58876053-58876072 MS.gene069075:CDS 35.0%
ATTAAGAGATGATTGCTTGG+TGG - chr7.4:58876151-58876170 MS.gene069075:CDS 35.0%
CACTATTCTGATCACATAGT+TGG - chr7.4:58876281-58876300 MS.gene069075:CDS 35.0%
CTCTATATACACGATCACTT+GGG + chr7.4:58876732-58876751 None:intergenic 35.0%
GTTGAATGGTAAAAACCATC+AGG + chr7.4:58876416-58876435 None:intergenic 35.0%
TAATGGAGCTATTCATTGGT+TGG - chr7.4:58876313-58876332 MS.gene069075:CDS 35.0%
TCAAATGTGTTTGTAAGCCT+TGG - chr7.4:58875757-58875776 MS.gene069075:CDS 35.0%
TGATAGTTCAAATTCTGCTG+AGG - chr7.4:58875709-58875728 MS.gene069075:CDS 35.0%
TGGTAAAAACCATCAGGAAA+AGG + chr7.4:58876410-58876429 None:intergenic 35.0%
TGTAGACCATATTGGGTAAA+AGG + chr7.4:58876597-58876616 None:intergenic 35.0%
TGTTTGTAAACTCCAGTTGA+TGG + chr7.4:58876068-58876087 None:intergenic 35.0%
! ACAAATTCAAGTTCGTGTAG+AGG - chr7.4:58875999-58876018 MS.gene069075:CDS 35.0%
! ATTTTCCAGACCTCATCATA+TGG - chr7.4:58876039-58876058 MS.gene069075:CDS 35.0%
!! CCCATGTGATTTTAATGTTG+TGG - chr7.4:58875965-58875984 MS.gene069075:CDS 35.0%
!! TTGATGGATTCCATATGATG+AGG + chr7.4:58876052-58876071 None:intergenic 35.0%
!!! AACTCTAAGAGAGTGTTTTG+CGG + chr7.4:58875835-58875854 None:intergenic 35.0%
AATTCATGAGGTAGATACCG+CGG + chr7.4:58875690-58875709 None:intergenic 40.0%
ACGACACCCACTTGTAAAAT+TGG - chr7.4:58875633-58875652 MS.gene069075:CDS 40.0%
AGAGTCGAAATGCCATCAAT+AGG + chr7.4:58876572-58876591 None:intergenic 40.0%
TTCAAATTCTGCTGAGGTTG+CGG - chr7.4:58875715-58875734 MS.gene069075:CDS 40.0%
! CTCTCTCCTTTTACCCAATA+TGG - chr7.4:58876588-58876607 MS.gene069075:CDS 40.0%
! TCTAGAGCATGGATCATTCT+GGG - chr7.4:58876685-58876704 MS.gene069075:CDS 40.0%
! TTAGAGATGCCTTTTCCTGA+TGG - chr7.4:58876398-58876417 MS.gene069075:CDS 40.0%
!! TAATGGGTTGTTCGCATTTG+AGG - chr7.4:58876195-58876214 MS.gene069075:CDS 40.0%
!! TTCTAGAGCATGGATCATTC+TGG - chr7.4:58876684-58876703 MS.gene069075:CDS 40.0%
ACGATCACTTGGGATCCAAA+TGG + chr7.4:58876722-58876741 None:intergenic 45.0%
ACTTGGGATCCAAATGGAAG+TGG + chr7.4:58876716-58876735 None:intergenic 45.0%
AGAAGAAGACGAATCTACCG+CGG - chr7.4:58875670-58875689 MS.gene069075:CDS 45.0%
GAGTCTTTGCTTTCACTCAC+TGG - chr7.4:58876749-58876768 MS.gene069075:CDS 45.0%
GGATTCCATATGATGAGGTC+TGG + chr7.4:58876047-58876066 None:intergenic 45.0%
TCAAATTCTGCTGAGGTTGC+GGG - chr7.4:58875716-58875735 MS.gene069075:CDS 45.0%
!! AGAGGACAACTTCTAGAGCA+TGG - chr7.4:58876674-58876693 MS.gene069075:CDS 45.0%
GGCGACATTGTTGGAAGAGA+CGG - chr7.4:58876623-58876642 MS.gene069075:CDS 50.0%
! GAGCATGGATCATTCTGGGA+CGG - chr7.4:58876689-58876708 MS.gene069075:CDS 50.0%
TGGGACGGTCCACTTCCATT+TGG - chr7.4:58876704-58876723 MS.gene069075:CDS 55.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 58875624 58876790 58875624 ID=MS.gene069075
chr7.4 mRNA 58875624 58876790 58875624 ID=MS.gene069075.t1;Parent=MS.gene069075
chr7.4 exon 58875624 58876790 58875624 ID=MS.gene069075.t1.exon1;Parent=MS.gene069075.t1
chr7.4 CDS 58875624 58876790 58875624 ID=cds.MS.gene069075.t1;Parent=MS.gene069075.t1
Gene Sequence

>MS.gene069075

ATGGAGGAGACGACACCCACTTGTAAAATTGGAAAAAGGCTCATGAAGAAGAAGACGAATCTACCGCGGTATCTACCTCATGAATTGATAGTTCAAATTCTGCTGAGGTTGCGGGTGAAGTCTCTTATTCGTTTCAAATGTGTTTGTAAGCCTTGGTTTTCTCTTATCTCTAATGATCCTCACTTTGCAAATTCGCATTTTGAAATTACCGCAAAACACTCTCTTAGAGTTTTGTTCATGTCAAATCATGTTCCGACTACACTATCTTTAGATTGTGAAGCATTGGATTATGATAATGCTATTTCTGAAATACCCAACCCGATCCCTAATTTTATTAAACCCCCATGTGATTTTAATGTTGTGGATTATCTTGCTACAAATTCAAGTTCGTGTAGAGGATTTATATTTCTGCACAATTTTCCAGACCTCATCATATGGAATCCATCAACTGGAGTTTACAAACAAATACCTTTGTCTCCTAATGATTCAAATAGTTTCAGTTATCTTTATGGATTTGGGTATGATCAATTAAGAGATGATTGCTTGGTGGTTTCTTTAACATCCAAAAAATTAATGGGTTGTTCGCATTTGAGGTTTTTTTCATTGAGAGATAATACTTGGAAAGAACTTGAGGGTGCTCACGTCCCATATGTTCTTCACTATTCTGATCACATAGTTGGGTCACTCTTTAATGGAGCTATTCATTGGTTGGTTTTTCGTCGTGATATAAAGAGGCCAGTTATAATTGCATTTGATTTAATGGATCGGAAACTTTTAGAGATGCCTTTTCCTGATGGTTTTTACCATTCAACTAATAATATTAATTTGTGGGTATTTGGAGAATTTCTCAGTTTATGGGCTAACGATTATGCTAATGAAAGAGTTGAAATATGGGTGATGAACGAATACAATGTTCATTCATCTTGGACTAAAACTCTTGTTCTTCCTATTGATGGCATTTCGACTCTCTCCTTTTACCCAATATGGTCTACAAAAAATGGCGACATTGTTGGAAGAGACGGCAGTAATCAATTACTGAAGTATAATGACAGAGGACAACTTCTAGAGCATGGATCATTCTGGGACGGTCCACTTCCATTTGGATCCCAAGTGATCGTGTATATAGAGTCTTTGCTTTCACTCACTGGTGACAATGTGCAAGCCTAA

Protein sequence

>MS.gene069075.t1

MEETTPTCKIGKRLMKKKTNLPRYLPHELIVQILLRLRVKSLIRFKCVCKPWFSLISNDPHFANSHFEITAKHSLRVLFMSNHVPTTLSLDCEALDYDNAISEIPNPIPNFIKPPCDFNVVDYLATNSSSCRGFIFLHNFPDLIIWNPSTGVYKQIPLSPNDSNSFSYLYGFGYDQLRDDCLVVSLTSKKLMGCSHLRFFSLRDNTWKELEGAHVPYVLHYSDHIVGSLFNGAIHWLVFRRDIKRPVIIAFDLMDRKLLEMPFPDGFYHSTNNINLWVFGEFLSLWANDYANERVEIWVMNEYNVHSSWTKTLVLPIDGISTLSFYPIWSTKNGDIVGRDGSNQLLKYNDRGQLLEHGSFWDGPLPFGSQVIVYIESLLSLTGDNVQA