AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene38220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38220.t1 MTR_5g097210 88.770 374 41 1 1 373 1 374 0.0 677
MS.gene38220.t1 MTR_1g055135 57.065 368 145 10 2 358 6 371 3.00e-130 378
MS.gene38220.t1 MTR_4g117750 60.388 361 128 6 7 358 1 355 6.53e-130 381
MS.gene38220.t1 MTR_4g117750 58.333 108 42 2 255 359 373 480 3.04e-30 121
MS.gene38220.t1 MTR_3g103020 59.615 364 130 10 7 359 18 375 2.49e-126 368
MS.gene38220.t1 MTR_3g034130 54.121 364 149 8 1 348 1 362 1.42e-122 358
MS.gene38220.t1 MTR_4g117850 56.198 363 145 9 5 358 19 376 9.25e-122 357
MS.gene38220.t1 MTR_3g034180 54.278 374 152 9 1 358 115 485 1.89e-121 360
MS.gene38220.t1 MTR_4g109280 58.678 363 134 11 3 358 2 355 1.31e-120 353
MS.gene38220.t1 MTR_5g070130 52.972 387 160 11 1 370 4 385 1.34e-118 349
MS.gene38220.t1 MTR_4g109270 55.256 371 142 10 1 358 1 360 5.37e-117 344
MS.gene38220.t1 MTR_3g034160 54.813 374 150 9 1 358 1 371 5.60e-116 342
MS.gene38220.t1 MTR_4g023080 54.645 366 142 12 1 358 1 350 2.96e-111 329
MS.gene38220.t1 MTR_6g060650 54.642 377 143 10 3 359 2 370 5.05e-111 329
MS.gene38220.t1 MTR_4g122850 52.044 367 161 9 19 373 12 375 1.50e-109 326
MS.gene38220.t1 MTR_4g117770 54.068 381 142 13 1 362 1 367 1.59e-109 325
MS.gene38220.t1 MTR_4g117810 54.068 381 142 13 1 362 1 367 1.59e-109 325
MS.gene38220.t1 MTR_5g070088 52.094 382 144 12 8 357 6 380 2.26e-108 323
MS.gene38220.t1 MTR_4g094365 52.255 377 152 11 1 362 1 364 2.52e-107 319
MS.gene38220.t1 MTR_5g070080 51.444 381 147 12 7 357 8 380 2.21e-106 318
MS.gene38220.t1 MTR_4g021785 52.044 367 151 13 1 358 1 351 1.33e-102 307
MS.gene38220.t1 MTR_4g117720 50.943 371 123 12 3 357 45 372 1.30e-101 305
MS.gene38220.t1 MTR_4g117780 50.789 380 156 12 1 362 1 367 2.14e-101 304
MS.gene38220.t1 MTR_1g055195 58.571 280 98 5 86 358 206 474 4.66e-99 302
MS.gene38220.t1 MTR_1g055165 48.229 367 127 10 2 359 3 315 5.53e-99 296
MS.gene38220.t1 MTR_4g023090 48.825 383 157 13 2 357 9 379 1.63e-97 295
MS.gene38220.t1 MTR_4g023070 49.730 370 153 13 12 358 7 366 4.42e-96 291
MS.gene38220.t1 MTR_4g116330 48.000 375 167 13 2 360 16 378 4.78e-96 291
MS.gene38220.t1 MTR_8g433040 50.000 376 153 12 1 362 10 364 7.60e-96 290
MS.gene38220.t1 MTR_8g032380 50.000 376 153 12 1 362 10 364 7.60e-96 290
MS.gene38220.t1 MTR_4g023130 50.411 365 118 13 1 358 1 309 8.73e-95 285
MS.gene38220.t1 MTR_4g118380 52.473 364 134 13 3 335 2 357 2.17e-93 283
MS.gene38220.t1 MTR_4g118370 60.494 243 77 3 118 359 33 257 5.27e-93 279
MS.gene38220.t1 MTR_4g023120 48.780 369 158 12 12 358 7 366 7.62e-92 280
MS.gene38220.t1 MTR_4g023380 46.154 390 148 12 2 356 9 371 4.45e-87 268
MS.gene38220.t1 MTR_4g023190 49.062 373 154 14 2 358 3 355 2.07e-85 263
MS.gene38220.t1 MTR_4g023150 48.919 370 160 13 2 358 3 356 2.92e-85 263
MS.gene38220.t1 MTR_8g032390 48.361 366 147 13 4 357 35 370 5.53e-84 260
MS.gene38220.t1 MTR_4g023200 46.893 354 150 14 22 358 24 356 1.27e-82 256
MS.gene38220.t1 MTR_4g023440 47.107 363 137 13 8 362 17 332 4.68e-82 254
MS.gene38220.t1 MTR_8g013010 56.134 269 96 11 7 264 52 309 7.03e-79 245
MS.gene38220.t1 MTR_4g117870 48.333 300 109 7 66 358 3 263 1.89e-78 242
MS.gene38220.t1 MTR_4g116330 43.467 375 145 14 2 360 16 339 1.04e-75 238
MS.gene38220.t1 MTR_8g433030 45.152 361 133 12 4 357 35 337 1.25e-75 237
MS.gene38220.t1 MTR_4g121580 43.590 390 163 17 1 366 1 357 8.36e-72 229
MS.gene38220.t1 MTR_1g055175 60.733 191 72 3 172 359 8 198 3.26e-71 221
MS.gene38220.t1 MTR_4g118400 48.084 287 108 12 81 356 38 294 1.21e-66 213
MS.gene38220.t1 MTR_1g055250 52.209 249 99 9 135 373 39 277 1.25e-66 214
MS.gene38220.t1 MTR_7g079370 42.450 351 173 14 37 365 16 359 2.30e-63 206
MS.gene38220.t1 MTR_7g079400 44.406 286 143 8 82 356 51 331 2.82e-63 206
MS.gene38220.t1 MTR_4g116320 52.752 218 95 4 147 360 43 256 2.01e-60 196
MS.gene38220.t1 MTR_2g048580 38.482 369 183 18 1 357 1 337 3.72e-59 195
MS.gene38220.t1 MTR_8g040935 51.000 200 89 6 167 359 8 205 2.39e-52 173
MS.gene38220.t1 MTR_8g102520 42.231 251 129 8 117 357 73 317 4.45e-52 176
MS.gene38220.t1 MTR_4g116340 43.673 245 100 7 1 230 26 247 4.50e-49 166
MS.gene38220.t1 MTR_7g079420 40.149 269 109 10 105 356 905 1138 3.29e-45 166
MS.gene38220.t1 MTR_6g463430 48.756 201 94 5 161 358 4 198 4.95e-45 154
MS.gene38220.t1 MTR_4g117530 44.545 220 77 7 141 358 73 249 3.45e-44 153
MS.gene38220.t1 MTR_4g114700 39.416 274 101 10 106 367 9 229 8.36e-37 134
MS.gene38220.t1 MTR_4g118360 56.000 125 50 3 240 360 1 124 4.04e-36 128
MS.gene38220.t1 MTR_7g117720 45.933 209 73 11 1 194 1 184 9.83e-35 129
MS.gene38220.t1 MTR_7g117720 55.670 97 36 4 267 357 177 272 3.91e-21 92.4
MS.gene38220.t1 MTR_2g021190 31.635 373 212 15 8 354 17 372 1.08e-33 129
MS.gene38220.t1 MTR_4g117430 46.452 155 65 4 116 264 10 152 1.30e-33 122
MS.gene38220.t1 MTR_8g098830 41.358 162 90 4 173 331 35 194 5.11e-30 115
MS.gene38220.t1 MTR_2g021150 29.255 376 225 17 8 358 13 372 1.84e-29 117
MS.gene38220.t1 MTR_5g023000 61.957 92 32 2 269 358 5 95 2.98e-28 106
MS.gene38220.t1 MTR_5g057790 29.839 372 204 17 12 354 50 393 3.73e-28 114
MS.gene38220.t1 MTR_4g122860 36.634 202 93 6 178 372 157 330 5.23e-28 112
MS.gene38220.t1 MTR_1g094210 27.937 383 214 15 1 354 49 398 5.75e-28 113
MS.gene38220.t1 MTR_4g061340 32.692 312 153 15 12 292 30 315 8.70e-28 112
MS.gene38220.t1 MTR_1g094210 28.333 360 197 14 1 331 49 376 2.73e-27 112
MS.gene38220.t1 MTR_4g133170 28.308 325 193 12 11 313 7 313 4.59e-27 110
MS.gene38220.t1 MTR_2g021155 31.642 335 191 13 12 325 40 357 1.51e-26 112
MS.gene38220.t1 MTR_2g021155 29.515 227 124 13 99 303 689 901 4.75e-14 74.3
MS.gene38220.t1 MTR_8g101580 29.319 382 217 20 2 354 37 394 1.65e-26 109
MS.gene38220.t1 MTR_1g097490 29.692 357 218 13 12 354 53 390 1.94e-26 109
MS.gene38220.t1 MTR_7g079450 44.853 136 65 5 226 357 3 132 4.58e-26 102
MS.gene38220.t1 MTR_4g108820 30.435 299 159 11 1 293 34 289 5.84e-26 106
MS.gene38220.t1 MTR_1g112930 28.710 310 189 12 5 300 21 312 7.99e-26 107
MS.gene38220.t1 MTR_3g007330 31.169 308 170 12 11 300 51 334 1.30e-25 107
MS.gene38220.t1 MTR_8g467140 32.566 304 173 13 7 293 30 318 1.35e-25 105
MS.gene38220.t1 MTR_2g029990 27.989 368 222 14 11 354 54 402 2.46e-25 106
MS.gene38220.t1 MTR_3g007430 30.201 298 177 11 11 292 46 328 3.21e-25 105
MS.gene38220.t1 MTR_2g055970 30.968 310 180 14 2 293 204 497 3.39e-25 107
MS.gene38220.t1 MTR_6g027910 29.708 377 216 14 12 354 13 374 7.56e-25 104
MS.gene38220.t1 MTR_3g006500 26.579 380 231 12 2 354 11 369 7.78e-25 104
MS.gene38220.t1 MTR_4g109290 42.236 161 51 7 9 158 6 135 4.97e-24 98.2
MS.gene38220.t1 MTR_3g036290 30.028 353 197 17 5 336 19 342 5.67e-24 101
MS.gene38220.t1 MTR_3g023930 28.571 364 199 17 15 354 41 367 6.17e-24 102
MS.gene38220.t1 MTR_4g055060 31.056 322 169 16 6 297 28 326 6.50e-24 102
MS.gene38220.t1 MTR_3g030250 29.900 301 164 15 15 297 44 315 1.40e-23 100
MS.gene38220.t1 MTR_1g097330 30.744 309 175 13 3 293 11 298 2.41e-23 100
MS.gene38220.t1 MTR_3g009310 32.013 303 162 16 12 292 46 326 2.48e-23 100
MS.gene38220.t1 MTR_5g022420 30.272 294 179 12 8 293 26 301 2.64e-23 100
MS.gene38220.t1 MTR_1g054725 28.117 377 212 15 12 354 24 375 5.40e-23 99.4
MS.gene38220.t1 MTR_5g069120 38.889 180 91 5 18 181 1 177 6.01e-23 94.7
MS.gene38220.t1 MTR_3g010920 27.394 376 220 12 3 354 35 381 6.42e-23 99.4
MS.gene38220.t1 MTR_2g021210 29.032 341 206 13 2 327 78 397 8.50e-23 99.4
MS.gene38220.t1 MTR_1g115160 28.981 314 179 12 6 301 19 306 1.11e-22 98.2
MS.gene38220.t1 MTR_1g097560 29.155 343 191 17 11 330 39 352 1.39e-22 98.2
MS.gene38220.t1 MTR_5g057690 30.565 301 177 12 12 301 50 329 3.55e-22 97.1
MS.gene38220.t1 MTR_6g034720 40.268 149 74 4 129 268 53 195 3.70e-22 94.0
MS.gene38220.t1 MTR_5g057020 31.561 301 169 14 12 301 50 324 3.97e-22 96.3
MS.gene38220.t1 MTR_3g013740 29.114 316 170 14 12 293 48 343 8.67e-22 96.3
MS.gene38220.t1 MTR_1g114700 30.247 324 183 12 5 301 19 326 8.73e-22 95.9
MS.gene38220.t1 MTR_3g010390 29.969 327 155 15 12 292 37 335 9.21e-22 96.3
MS.gene38220.t1 MTR_3g007360 30.864 324 165 16 11 302 55 351 1.07e-21 95.9
MS.gene38220.t1 MTR_6g053260 27.483 302 198 10 11 300 340 632 1.12e-21 97.1
MS.gene38220.t1 MTR_3g007410 31.250 320 169 15 11 302 55 351 1.28e-21 95.9
MS.gene38220.t1 MTR_3g010590 26.330 376 211 18 12 354 43 385 1.68e-21 95.1
MS.gene38220.t1 MTR_2g046920 27.564 312 183 11 4 294 20 309 1.84e-21 95.1
MS.gene38220.t1 MTR_3g010970 28.197 305 169 14 12 297 52 325 2.18e-21 95.1
MS.gene38220.t1 MTR_4g031770 28.947 304 181 13 12 297 8 294 2.98e-21 94.4
MS.gene38220.t1 MTR_3g007300 31.250 288 153 12 12 292 53 302 2.98e-21 94.4
MS.gene38220.t1 MTR_1g068835 28.616 318 160 12 10 292 6 291 5.49e-21 93.6
MS.gene38220.t1 MTR_5g007610 29.712 313 183 13 12 300 45 344 6.60e-21 93.6
MS.gene38220.t1 MTR_6g053240 28.115 313 187 12 11 300 31 328 6.73e-21 93.6
MS.gene38220.t1 MTR_6g013270 29.260 311 190 14 5 297 25 323 7.40e-21 93.6
MS.gene38220.t1 MTR_1g068860 29.373 303 179 11 10 292 6 293 1.12e-20 92.8
MS.gene38220.t1 MTR_0115s0020 26.750 400 226 20 9 355 10 395 2.89e-20 91.7
MS.gene38220.t1 MTR_5g011200 27.961 304 179 13 12 293 21 306 3.31e-20 91.3
MS.gene38220.t1 MTR_3g006670 30.464 302 163 15 12 288 53 332 4.58e-20 91.3
MS.gene38220.t1 MTR_3g024150 29.568 301 171 14 12 293 39 317 4.64e-20 90.9
MS.gene38220.t1 MTR_1g055200 54.321 81 36 1 102 181 5 85 5.26e-20 84.7
MS.gene38220.t1 MTR_4g107820 28.710 310 164 13 11 293 39 318 5.55e-20 90.9
MS.gene38220.t1 MTR_4g107780 28.710 310 164 13 11 293 39 318 5.55e-20 90.9
MS.gene38220.t1 MTR_4g107780 28.710 310 164 13 11 293 39 318 5.78e-20 90.9
MS.gene38220.t1 MTR_0064s0160 25.707 389 244 13 9 359 42 423 6.09e-20 91.3
MS.gene38220.t1 MTR_3g010520 28.477 302 159 15 15 297 32 295 6.09e-20 90.5
MS.gene38220.t1 MTR_4g107820 28.710 310 164 13 11 293 39 318 6.18e-20 90.9
MS.gene38220.t1 MTR_1g068875 27.829 327 195 11 10 313 6 314 6.76e-20 90.5
MS.gene38220.t1 MTR_3g072470 29.586 338 170 12 7 296 18 335 8.08e-20 90.5
MS.gene38220.t1 MTR_6g021880 29.526 359 222 15 19 354 31 381 8.91e-20 90.1
MS.gene38220.t1 MTR_3g036430 27.381 336 180 14 12 327 24 315 9.44e-20 89.7
MS.gene38220.t1 MTR_2g078900 28.525 305 176 12 12 297 37 318 1.27e-19 89.4
MS.gene38220.t1 MTR_3g014540 29.022 317 177 15 6 297 27 320 1.89e-19 89.4
MS.gene38220.t1 MTR_7g407070 28.060 335 170 14 12 300 36 345 2.18e-19 89.4
MS.gene38220.t1 MTR_3g009240 30.333 300 159 12 12 288 40 312 2.73e-19 89.0
MS.gene38220.t1 MTR_3g011100 29.467 319 172 16 12 301 239 533 8.82e-19 88.2
MS.gene38220.t1 MTR_6g007135 28.272 382 223 17 7 354 25 389 9.19e-19 87.4
MS.gene38220.t1 MTR_7g056760 26.316 399 230 19 6 354 20 404 1.12e-18 87.0
MS.gene38220.t1 MTR_2g046830 26.885 305 194 11 4 294 21 310 1.23e-18 87.0
MS.gene38220.t1 MTR_3g083640 27.922 308 175 14 11 297 58 339 1.49e-18 86.7
MS.gene38220.t1 MTR_5g046300 27.027 296 173 12 12 288 8 279 1.62e-18 86.3
MS.gene38220.t1 MTR_5g046290 27.027 296 173 12 12 288 8 279 1.62e-18 86.3
MS.gene38220.t1 MTR_3g036335 27.968 379 208 17 12 354 45 394 1.68e-18 86.7
MS.gene38220.t1 MTR_6g065980 29.947 374 196 18 12 354 20 358 1.73e-18 86.3
MS.gene38220.t1 MTR_0044s0300 27.763 371 217 16 12 354 42 389 1.74e-18 86.7
MS.gene38220.t1 MTR_6g048120 28.205 390 211 17 12 354 40 407 1.75e-18 86.7
MS.gene38220.t1 MTR_3g010870 25.789 380 221 14 6 354 35 384 3.05e-18 85.9
MS.gene38220.t1 MTR_5g046260 26.429 280 165 12 12 288 8 249 3.30e-18 84.3
MS.gene38220.t1 MTR_2g078870 28.980 245 150 8 119 354 78 307 3.63e-18 84.7
MS.gene38220.t1 MTR_2g021252 25.989 354 229 12 14 355 53 385 3.77e-18 85.5
MS.gene38220.t1 MTR_3g011060 29.114 316 168 16 12 293 32 325 5.03e-18 85.1
MS.gene38220.t1 MTR_7g056003 27.139 339 164 12 11 296 18 326 5.32e-18 85.1
MS.gene38220.t1 MTR_2g046900 27.213 305 201 10 4 294 24 321 5.40e-18 85.1
MS.gene38220.t1 MTR_1g055375 26.537 309 197 12 12 301 8 305 5.69e-18 84.7
MS.gene38220.t1 MTR_3g006570 31.081 296 176 15 12 293 25 306 5.84e-18 84.7
MS.gene38220.t1 MTR_4g023430 53.012 83 33 3 285 362 141 222 6.80e-18 82.0
MS.gene38220.t1 MTR_4g023430 58.442 77 30 2 2 77 34 109 2.33e-15 75.1
MS.gene38220.t1 MTR_2g021050 28.483 323 193 14 10 313 7 310 8.80e-18 84.3
MS.gene38220.t1 MTR_7g007300 25.410 366 223 13 12 354 107 445 1.31e-17 84.3
MS.gene38220.t1 MTR_3g010620 25.574 305 178 11 6 293 34 306 1.78e-17 83.6
MS.gene38220.t1 MTR_3g007270 27.812 320 187 15 6 297 45 348 1.87e-17 83.6
MS.gene38220.t1 MTR_3g013770 29.073 313 181 14 9 297 33 328 2.28e-17 83.2
MS.gene38220.t1 MTR_1g050542 26.509 381 216 18 6 354 56 404 2.31e-17 83.2
MS.gene38220.t1 MTR_1g055070 25.387 323 179 11 2 297 41 328 2.59e-17 83.2
MS.gene38220.t1 MTR_2g046800 27.250 400 227 20 3 354 9 392 3.35e-17 82.8
MS.gene38220.t1 MTR_4g014370 24.634 410 247 16 1 355 3 405 5.31e-17 82.4
MS.gene38220.t1 MTR_3g010430 26.537 309 175 10 12 293 40 323 6.21e-17 82.0
MS.gene38220.t1 MTR_2g104340 25.990 404 231 16 2 355 7 392 6.72e-17 82.0
MS.gene38220.t1 MTR_4g037465 28.142 366 212 16 6 332 19 372 7.11e-17 81.6
MS.gene38220.t1 MTR_4g030830 26.316 418 219 18 1 354 1 393 7.76e-17 81.6
MS.gene38220.t1 MTR_4g117550 25.654 382 205 16 16 355 25 369 8.47e-17 81.3
MS.gene38220.t1 MTR_7g056290 27.221 349 165 14 7 296 21 339 9.13e-17 81.6
MS.gene38220.t1 MTR_5g057643 30.833 240 125 10 12 230 50 269 1.04e-16 79.7
MS.gene38220.t1 MTR_1g054575 28.707 317 182 16 6 303 50 341 1.11e-16 82.0
MS.gene38220.t1 MTR_8g099460 25.714 385 226 15 10 357 7 368 1.13e-16 81.3
MS.gene38220.t1 MTR_0760s0010 27.119 295 178 12 13 293 52 323 1.52e-16 80.9
MS.gene38220.t1 MTR_8g073550 34.872 195 102 10 8 186 29 214 1.53e-16 78.6
MS.gene38220.t1 MTR_3g023940 25.275 364 227 14 15 354 41 383 1.76e-16 80.5
MS.gene38220.t1 MTR_5g059430 25.000 400 233 16 12 353 30 420 2.11e-16 80.5
MS.gene38220.t1 MTR_4g129190 27.511 229 135 7 12 223 10 224 2.17e-16 80.1
MS.gene38220.t1 MTR_2g025960 29.555 247 134 11 103 317 5 243 2.19e-16 79.3
MS.gene38220.t1 MTR_0464s0020 28.655 342 176 16 7 296 22 347 2.89e-16 80.1
MS.gene38220.t1 MTR_1g115185 25.503 298 193 10 12 293 43 327 2.92e-16 80.1
MS.gene38220.t1 MTR_3g030330 27.628 333 197 15 12 326 24 330 3.21e-16 79.7
MS.gene38220.t1 MTR_3g024040 27.273 297 188 11 15 303 38 314 3.43e-16 79.7
MS.gene38220.t1 MTR_3g006530 28.758 306 174 15 12 293 44 329 3.51e-16 79.7
MS.gene38220.t1 MTR_6g004660 29.193 322 182 14 1 288 1 310 4.38e-16 79.3
MS.gene38220.t1 MTR_2g024110 26.756 299 182 10 11 288 7 289 4.83e-16 79.0
MS.gene38220.t1 MTR_8g013005 65.385 52 18 0 307 358 4 55 5.00e-16 72.0
MS.gene38220.t1 MTR_6g090180 25.441 397 239 17 8 355 46 434 5.96e-16 79.3
MS.gene38220.t1 MTR_3g014570 26.518 313 180 13 6 292 27 315 7.92e-16 78.6
MS.gene38220.t1 MTR_5g009060 28.485 330 163 15 12 288 29 338 1.12e-15 78.2
MS.gene38220.t1 MTR_2g024100 27.778 342 197 13 12 317 11 338 1.15e-15 78.2
MS.gene38220.t1 MTR_2g047832 27.059 340 169 16 4 294 25 334 1.22e-15 78.2
MS.gene38220.t1 MTR_1g088120 27.052 329 198 12 5 296 6 329 1.50e-15 77.8
MS.gene38220.t1 MTR_3g030240 25.962 312 163 15 12 297 44 313 1.88e-15 77.4
MS.gene38220.t1 MTR_3g024110 28.904 301 176 13 12 297 105 382 2.41e-15 77.4
MS.gene38220.t1 MTR_1g055145 56.000 75 31 2 206 279 129 202 2.53e-15 75.9
MS.gene38220.t1 MTR_1g055145 48.352 91 40 4 18 104 43 130 8.60e-14 71.6
MS.gene38220.t1 MTR_1g056710 26.440 382 213 18 12 355 38 389 2.72e-15 77.0
MS.gene38220.t1 MTR_8g046200 24.939 413 235 16 12 359 20 422 2.74e-15 77.0
MS.gene38220.t1 MTR_5g057040 34.343 198 95 9 12 189 50 232 2.88e-15 77.8
MS.gene38220.t1 MTR_2g426060 27.697 343 195 17 10 313 8 336 3.81e-15 76.6
MS.gene38220.t1 MTR_1g058190 24.507 355 231 10 12 353 39 369 4.90e-15 76.3
MS.gene38220.t1 MTR_7g013590 30.031 323 187 15 12 311 40 346 5.15e-15 76.3
MS.gene38220.t1 MTR_3g030350 29.932 294 169 15 12 288 39 312 5.25e-15 76.3
MS.gene38220.t1 MTR_2g026010 28.111 217 128 7 99 292 86 297 5.54e-15 76.3
MS.gene38220.t1 MTR_2g426070 25.575 391 249 12 10 367 8 389 5.56e-15 76.3
MS.gene38220.t1 MTR_0054s0090 24.808 391 230 17 16 355 25 402 6.33e-15 75.9
MS.gene38220.t1 MTR_7g069550 24.324 370 219 16 2 322 7 364 7.64e-15 75.9
MS.gene38220.t1 MTR_2g043410 25.854 410 228 15 7 354 21 416 7.67e-15 75.9
MS.gene38220.t1 MTR_4g024890 23.174 397 234 16 8 354 9 384 1.46e-14 74.7
MS.gene38220.t1 MTR_8g063440 25.000 376 230 17 16 355 20 379 1.52e-14 74.7
MS.gene38220.t1 MTR_2g031720 26.263 396 236 18 12 373 10 383 1.56e-14 74.7
MS.gene38220.t1 MTR_7g066100 25.500 400 235 17 7 356 9 395 1.82e-14 74.7
MS.gene38220.t1 MTR_0128s0020 25.063 399 237 16 1 353 10 392 1.85e-14 74.7
MS.gene38220.t1 MTR_7g055987 26.571 350 171 15 11 311 23 335 1.96e-14 74.3
MS.gene38220.t1 MTR_2g028110 26.829 328 194 15 10 310 6 314 2.05e-14 74.3
MS.gene38220.t1 MTR_6g014720 26.367 311 184 14 5 297 22 305 2.24e-14 74.3
MS.gene38220.t1 MTR_2g031640 25.450 389 234 15 12 369 10 373 2.24e-14 74.3
MS.gene38220.t1 MTR_0667s0010 24.786 351 217 12 10 327 8 344 2.74e-14 73.9
MS.gene38220.t1 MTR_3g096250 35.542 166 82 6 11 159 50 207 2.78e-14 73.6
MS.gene38220.t1 MTR_8g464770 26.455 378 229 18 12 356 16 377 3.32e-14 73.6
MS.gene38220.t1 MTR_3g024130 26.733 303 170 16 69 336 16 301 3.75e-14 72.8
MS.gene38220.t1 MTR_4g055820 24.865 370 214 13 1 322 6 359 4.33e-14 73.2
MS.gene38220.t1 MTR_7g057270 27.103 321 180 13 11 290 29 336 5.05e-14 73.2
MS.gene38220.t1 MTR_6g080680 23.117 385 227 14 16 353 27 389 6.75e-14 72.8
MS.gene38220.t1 MTR_4g028510 24.742 388 239 14 12 355 20 398 7.72e-14 72.8
MS.gene38220.t1 MTR_6g027890 28.782 271 151 11 113 354 67 324 8.51e-14 72.0
MS.gene38220.t1 MTR_3g009260 28.302 318 173 14 6 299 39 325 1.08e-13 72.0
MS.gene38220.t1 MTR_2g034700 25.797 345 200 17 1 312 6 327 1.12e-13 72.0
MS.gene38220.t1 MTR_3g096280 26.027 292 153 11 20 288 17 268 1.42e-13 71.6
MS.gene38220.t1 MTR_1g007410 26.807 332 175 18 12 292 26 340 1.65e-13 71.6
MS.gene38220.t1 MTR_0267s0050 26.400 375 208 19 8 332 6 362 1.69e-13 71.6
MS.gene38220.t1 MTR_7g070830 24.932 365 210 15 6 313 18 375 1.83e-13 71.6
MS.gene38220.t1 MTR_7g070880 24.728 368 207 16 6 313 18 375 2.12e-13 71.6
MS.gene38220.t1 MTR_5g056020 25.882 425 228 18 2 354 11 420 2.90e-13 71.2
MS.gene38220.t1 MTR_4g023100 51.429 70 30 2 293 362 54 119 2.92e-13 66.2
MS.gene38220.t1 MTR_2g031680 25.469 373 229 13 11 357 9 358 4.13e-13 70.5
MS.gene38220.t1 MTR_0627s0010 25.278 360 198 15 11 313 41 386 4.53e-13 70.5
MS.gene38220.t1 MTR_8g012090 25.223 337 170 14 16 312 24 318 4.54e-13 69.7
MS.gene38220.t1 MTR_3g058440 27.381 252 149 9 12 243 39 276 7.06e-13 68.9
MS.gene38220.t1 MTR_5g046280 30.058 173 106 7 119 288 22 182 7.51e-13 68.2
MS.gene38220.t1 MTR_0054s0100 24.297 391 230 17 16 353 25 402 1.13e-12 69.3
MS.gene38220.t1 MTR_7g028660 24.923 325 190 11 5 292 7 314 1.69e-12 68.6
MS.gene38220.t1 MTR_2g426020 25.773 388 236 18 10 358 8 382 1.79e-12 68.6
MS.gene38220.t1 MTR_1g061330 22.727 374 236 13 11 355 7 356 2.14e-12 68.2
MS.gene38220.t1 MTR_7g060940 25.762 361 191 16 3 313 16 349 2.73e-12 67.8
MS.gene38220.t1 MTR_7g078040 26.724 348 184 15 1 290 1 335 3.00e-12 68.2
MS.gene38220.t1 MTR_5g097680 25.236 424 216 23 12 355 21 423 3.09e-12 67.8
MS.gene38220.t1 MTR_4g122840 36.719 128 44 4 232 356 165 258 3.51e-12 66.6
MS.gene38220.t1 MTR_6g478230 25.954 393 218 19 12 353 31 401 3.81e-12 67.8
MS.gene38220.t1 MTR_6g042600 36.306 157 85 6 7 162 35 177 6.45e-12 67.0
MS.gene38220.t1 MTR_7g445890 24.183 306 190 11 6 288 13 299 6.55e-12 66.6
MS.gene38220.t1 MTR_0097s0030 24.936 389 222 18 12 357 18 379 7.86e-12 66.6
MS.gene38220.t1 MTR_2g047240 24.936 389 222 18 12 357 18 379 7.86e-12 66.6
MS.gene38220.t1 MTR_3g006640 27.907 215 118 8 103 293 20 221 8.07e-12 65.9
MS.gene38220.t1 MTR_5g097330 24.745 392 227 17 16 355 24 399 1.44e-11 65.9
MS.gene38220.t1 MTR_2g006360 28.475 295 148 15 7 290 45 287 1.59e-11 65.5
MS.gene38220.t1 MTR_2g046860 28.846 208 128 8 98 294 4 202 1.83e-11 65.1
MS.gene38220.t1 MTR_8g039500 24.779 339 195 14 12 313 16 331 1.85e-11 65.1
MS.gene38220.t1 MTR_5g069760 26.398 322 172 16 7 290 4 298 1.90e-11 65.1
MS.gene38220.t1 MTR_7g062100 26.000 400 210 19 11 354 27 396 1.93e-11 65.5
MS.gene38220.t1 MTR_1g097370 26.728 217 138 10 109 313 104 311 2.37e-11 65.5
MS.gene38220.t1 MTR_5g010660 26.159 302 186 12 11 295 37 318 2.48e-11 65.1
MS.gene38220.t1 MTR_4g030110 25.895 363 191 17 12 330 34 362 3.78e-11 64.3
MS.gene38220.t1 MTR_7g056503 23.291 395 244 19 5 354 17 397 3.85e-11 64.3
MS.gene38220.t1 MTR_5g037680 24.548 387 231 18 12 354 12 381 5.04e-11 64.3
MS.gene38220.t1 MTR_6g055210 26.829 328 176 13 6 287 20 329 5.14e-11 64.3
MS.gene38220.t1 MTR_3g007390 28.659 164 101 5 141 301 1 151 6.76e-11 61.6
MS.gene38220.t1 MTR_7g077970 24.695 328 196 11 6 290 5 324 6.83e-11 63.9
MS.gene38220.t1 MTR_3g058470 27.108 332 169 14 11 313 40 327 7.35e-11 63.5
MS.gene38220.t1 MTR_0129s0050 23.457 405 231 14 12 355 18 404 7.46e-11 63.5
MS.gene38220.t1 MTR_2g066200 26.512 215 127 8 119 312 137 341 7.47e-11 63.5
MS.gene38220.t1 MTR_5g056990 30.588 170 100 8 129 294 22 177 8.56e-11 62.0
MS.gene38220.t1 MTR_5g096710 25.373 402 222 20 7 354 21 398 9.52e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38220.t1 AT3G23880 28.198 383 227 19 2 358 3 363 3.52e-23 99.8
MS.gene38220.t1 AT3G06240 27.845 413 223 19 2 357 27 421 6.68e-23 99.8
MS.gene38220.t1 AT4G12560 28.485 330 188 16 12 308 8 322 5.05e-18 85.5
MS.gene38220.t1 AT4G12560 28.485 330 188 16 12 308 8 322 5.05e-18 85.5
MS.gene38220.t1 AT4G12560 28.485 330 188 16 12 308 8 322 5.05e-18 85.5
MS.gene38220.t1 AT3G07870 24.430 307 202 10 12 295 32 331 1.72e-13 71.6
MS.gene38220.t1 AT2G40910 24.405 336 207 13 10 313 71 391 4.36e-11 64.7
MS.gene38220.t1 AT2G40910 24.405 336 207 13 10 313 64 384 4.61e-11 64.3
MS.gene38220.t1 AT1G30790 24.451 319 200 12 12 301 13 319 5.64e-11 63.9

Find 61 sgRNAs with CRISPR-Local

Find 79 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTTCGATATTGAAATTAA+AGG 0.208263 5.3:-78511284 MS.gene38220:CDS
CCGGTAGCCTTAGCAAGATT+TGG 0.279982 5.3:+78511528 None:intergenic
GGTCACTGTCAGCTTGTCAT+TGG 0.288922 5.3:+78510503 None:intergenic
TTAGAGGATTTCTCAGTCTA+TGG 0.289404 5.3:-78510797 MS.gene38220:CDS
GTCACTGTCAGCTTGTCATT+GGG 0.292686 5.3:+78510504 None:intergenic
ATTTAACTACCTTATTCTTC+TGG 0.298545 5.3:+78510459 None:intergenic
TATTGTTGTCTTTCATTTAA+CGG 0.306646 5.3:-78510892 MS.gene38220:CDS
GAAGAGACATTAGTATAAAA+AGG 0.325623 5.3:+78510993 None:intergenic
GAATTATAATTAATATCAAC+TGG 0.339568 5.3:+78510843 None:intergenic
TAGGGAATGTCATCATAAAT+AGG 0.340881 5.3:+78510693 None:intergenic
GGGACGATGAAGTTGATATA+TGG 0.344274 5.3:-78510767 MS.gene38220:CDS
CGCAACAGATGATTATTTAG+TGG 0.344517 5.3:-78511126 MS.gene38220:CDS
TCTTCAATGGGGCTATTCAC+TGG 0.420006 5.3:-78510947 MS.gene38220:CDS
ACGCACAAACCAGAAGAATA+AGG 0.424832 5.3:-78510468 None:intergenic
TTGGTGCATGCTTCTACCTA+TGG 0.429270 5.3:-78511232 MS.gene38220:CDS
TATTTGTTTGTTACGTCCAA+TGG 0.431181 5.3:+78511202 None:intergenic
TCAAATGCGTTTGTAAGTCT+TGG 0.431299 5.3:-78511487 MS.gene38220:CDS
CAATGGGGCTATTCACTGGT+TGG 0.434685 5.3:-78510943 MS.gene38220:CDS
CAAGTAGAGTCGTTCTTCAA+TGG 0.436469 5.3:-78510960 MS.gene38220:CDS
AATACAAAGTGCATTCATCT+TGG 0.438377 5.3:-78510734 MS.gene38220:CDS
AAGTAGAGTCGTTCTTCAAT+GGG 0.446028 5.3:-78510959 MS.gene38220:CDS
AATTATAATTCCAAAGGTTG+TGG 0.459804 5.3:-78510831 MS.gene38220:CDS
TTATACTAATGTCTCTTCCT+CGG 0.466914 5.3:-78510988 MS.gene38220:CDS
ATTGGAACAGATGGTGGTAC+TGG 0.468517 5.3:-78510633 MS.gene38220:CDS
TGAGTTTGAAATTTGATCAC+GGG 0.471501 5.3:+78511094 None:intergenic
TCCACGTGCATCTTCACAAT+AGG 0.482064 5.3:+78510566 None:intergenic
TTTGTGCGTCTTCTTAAGCT+TGG 0.484874 5.3:+78510482 None:intergenic
TTGTCTTTCATTTAACGGAA+AGG 0.499415 5.3:-78510887 MS.gene38220:CDS
TAGGATAAAGGGCAAAAGTA+GGG 0.505069 5.3:+78510675 None:intergenic
CCAAATCTTGCTAAGGCTAC+CGG 0.514358 5.3:-78511528 MS.gene38220:CDS
AAATTAAAGGTTCGTGTAGA+GGG 0.515124 5.3:-78511271 MS.gene38220:CDS
CTGAGTTTGAAATTTGATCA+CGG 0.522327 5.3:+78511093 None:intergenic
ATTGAGAGCTAATGTGTGGC+AGG 0.523321 5.3:-78511039 MS.gene38220:CDS
TACCTATGGAATCCATCCAT+TGG 0.530296 5.3:-78511218 MS.gene38220:CDS
GAAATTAAAGGTTCGTGTAG+AGG 0.532265 5.3:-78511272 MS.gene38220:CDS
GGACGATGAAGTTGATATAT+GGG 0.532674 5.3:-78510766 MS.gene38220:CDS
ATAGGATAAAGGGCAAAAGT+AGG 0.534631 5.3:+78510674 None:intergenic
GATATTAATTATAATTCCAA+AGG 0.542638 5.3:-78510837 MS.gene38220:CDS
TGATCATCCAAATCTTGCTA+AGG 0.543341 5.3:-78511535 MS.gene38220:CDS
ATCAAATGAGGTAGAAACAA+TGG 0.551207 5.3:+78511554 None:intergenic
TGTTTGTTACGTCCAATGGA+TGG 0.559201 5.3:+78511206 None:intergenic
TCACTGTCAGCTTGTCATTG+GGG 0.567864 5.3:+78510505 None:intergenic
GGTGATATTATTGGAACAGA+TGG 0.576103 5.3:-78510642 MS.gene38220:CDS
ACTCTGTATACATAGCCAAT+CGG 0.578596 5.3:+78510541 None:intergenic
AATGAAAGACAACAATAACT+TGG 0.579507 5.3:+78510898 None:intergenic
ATGATGTGCTATCTCACTTG+TGG 0.589833 5.3:-78511070 MS.gene38220:CDS
TCAATATCGAAATAAGATTG+TGG 0.600503 5.3:+78511293 None:intergenic
AGATGCACGTGGATTCCGAT+TGG 0.602170 5.3:-78510556 MS.gene38220:CDS
ATATAATCATTAGGAGACAA+AGG 0.607813 5.3:+78511179 None:intergenic
AAGATTTGGATGATCAAATG+AGG 0.613053 5.3:+78511542 None:intergenic
AACAGATGGTGGTACTGGAT+TGG 0.625571 5.3:-78510628 MS.gene38220:CDS
TCTACAAGTATGTGTTGCAG+AGG 0.628572 5.3:+78511412 None:intergenic
CGACTCTACTTGTCGAACCG+AGG 0.630880 5.3:+78510971 None:intergenic
AATTATAATTAATATCAACT+GGG 0.634811 5.3:+78510844 None:intergenic
TTGGTGAAATATAACGACAA+AGG 0.634925 5.3:-78510609 MS.gene38220:CDS
AGACTAATAAGTGAATTCAC+CGG 0.636876 5.3:+78511509 None:intergenic
TCTCATTGAGAGCTAATGTG+TGG 0.640904 5.3:-78511043 MS.gene38220:CDS
GTCCAATGGATGGATTCCAT+AGG 0.664599 5.3:+78511216 None:intergenic
GATATTATTGGAACAGATGG+TGG 0.666571 5.3:-78510639 MS.gene38220:CDS
AGTAGAGTCGTTCTTCAATG+GGG 0.705724 5.3:-78510958 MS.gene38220:CDS
TCCTATTGTGAAGATGCACG+TGG 0.711389 5.3:-78510567 MS.gene38220:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATAATTAATATCAACT+GGG + chr5.3:78511198-78511217 None:intergenic 10.0%
!!! ATTTTTAATTTATATGGTTT+TGG - chr5.3:78510881-78510900 MS.gene38220:CDS 10.0%
!!! TTTTTAATTTATATGGTTTT+GGG - chr5.3:78510882-78510901 MS.gene38220:CDS 10.0%
!! GAATTATAATTAATATCAAC+TGG + chr5.3:78511199-78511218 None:intergenic 15.0%
!! GATATTAATTATAATTCCAA+AGG - chr5.3:78511202-78511221 MS.gene38220:CDS 15.0%
!! TATTTCGATATTGAAATTAA+AGG - chr5.3:78510755-78510774 MS.gene38220:CDS 15.0%
!! TATTGTTGTCTTTCATTTAA+CGG - chr5.3:78511147-78511166 MS.gene38220:CDS 20.0%
! AATGAAAGACAACAATAACT+TGG + chr5.3:78511144-78511163 None:intergenic 25.0%
! AATTATAATTCCAAAGGTTG+TGG - chr5.3:78511208-78511227 MS.gene38220:CDS 25.0%
! ACAAAAAGTGGTGATATTAT+TGG - chr5.3:78511388-78511407 MS.gene38220:CDS 25.0%
! ATATAATCATTAGGAGACAA+AGG + chr5.3:78510863-78510882 None:intergenic 25.0%
! ATTAGTATAAAAAGGCAAAC+GGG + chr5.3:78511041-78511060 None:intergenic 25.0%
! CATTAGTATAAAAAGGCAAA+CGG + chr5.3:78511042-78511061 None:intergenic 25.0%
! GAAGAGACATTAGTATAAAA+AGG + chr5.3:78511049-78511068 None:intergenic 25.0%
! TCAATATCGAAATAAGATTG+TGG + chr5.3:78510749-78510768 None:intergenic 25.0%
!!! AATATCACCACTTTTTGTAT+AGG + chr5.3:78511386-78511405 None:intergenic 25.0%
!!! CACTTTTTGTATAGGATAAA+GGG + chr5.3:78511378-78511397 None:intergenic 25.0%
!!! TCTATAGATTGAGTTTTAAG+AGG + chr5.3:78510674-78510693 None:intergenic 25.0%
AAATTAAAGGTTCGTGTAGA+GGG - chr5.3:78510768-78510787 MS.gene38220:CDS 30.0%
AAGATTTGGATGATCAAATG+AGG + chr5.3:78510500-78510519 None:intergenic 30.0%
AATACAAAGTGCATTCATCT+TGG - chr5.3:78511305-78511324 MS.gene38220:CDS 30.0%
AGACTAATAAGTGAATTCAC+CGG + chr5.3:78510533-78510552 None:intergenic 30.0%
ATCAAATGAGGTAGAAACAA+TGG + chr5.3:78510488-78510507 None:intergenic 30.0%
CCTTTATCCTATACAAAAAG+TGG - chr5.3:78511376-78511395 MS.gene38220:CDS 30.0%
TAGGGAATGTCATCATAAAT+AGG + chr5.3:78511349-78511368 None:intergenic 30.0%
TTATACTAATGTCTCTTCCT+CGG - chr5.3:78511051-78511070 MS.gene38220:CDS 30.0%
TTGGTGAAATATAACGACAA+AGG - chr5.3:78511430-78511449 MS.gene38220:CDS 30.0%
TTGTCTTTCATTTAACGGAA+AGG - chr5.3:78511152-78511171 MS.gene38220:CDS 30.0%
! CTGAGTTTGAAATTTGATCA+CGG + chr5.3:78510949-78510968 None:intergenic 30.0%
! TATTTGTTTGTTACGTCCAA+TGG + chr5.3:78510840-78510859 None:intergenic 30.0%
! TGAGTTTGAAATTTGATCAC+GGG + chr5.3:78510948-78510967 None:intergenic 30.0%
!!! ATAGATTGAGTTTTAAGAGG+TGG + chr5.3:78510671-78510690 None:intergenic 30.0%
!!! CCACTTTTTGTATAGGATAA+AGG + chr5.3:78511379-78511398 None:intergenic 30.0%
AAGTAGAGTCGTTCTTCAAT+GGG - chr5.3:78511080-78511099 MS.gene38220:CDS 35.0%
ACTCTGTATACATAGCCAAT+CGG + chr5.3:78511501-78511520 None:intergenic 35.0%
ATAGGATAAAGGGCAAAAGT+AGG + chr5.3:78511368-78511387 None:intergenic 35.0%
CGCAACAGATGATTATTTAG+TGG - chr5.3:78510913-78510932 MS.gene38220:CDS 35.0%
GAAATTAAAGGTTCGTGTAG+AGG - chr5.3:78510767-78510786 MS.gene38220:CDS 35.0%
GATATTATTGGAACAGATGG+TGG - chr5.3:78511400-78511419 MS.gene38220:CDS 35.0%
GGTGATATTATTGGAACAGA+TGG - chr5.3:78511397-78511416 MS.gene38220:CDS 35.0%
TAGGATAAAGGGCAAAAGTA+GGG + chr5.3:78511367-78511386 None:intergenic 35.0%
TCAAATGCGTTTGTAAGTCT+TGG - chr5.3:78510552-78510571 MS.gene38220:CDS 35.0%
TGATCATCCAAATCTTGCTA+AGG - chr5.3:78510504-78510523 MS.gene38220:CDS 35.0%
TTAGAGGATTTCTCAGTCTA+TGG - chr5.3:78511242-78511261 MS.gene38220:CDS 35.0%
! ATTCCAAAGGTTGTGGTTTT+TGG - chr5.3:78511215-78511234 MS.gene38220:CDS 35.0%
! GGGTTTATACTTTTGCACTT+TGG - chr5.3:78510788-78510807 MS.gene38220:CDS 35.0%
! TCTCAGTCTATGGATTTTGA+GGG - chr5.3:78511252-78511271 MS.gene38220:CDS 35.0%
! TTCCAAAGGTTGTGGTTTTT+GGG - chr5.3:78511216-78511235 MS.gene38220:CDS 35.0%
! TTCTCAGTCTATGGATTTTG+AGG - chr5.3:78511251-78511270 MS.gene38220:CDS 35.0%
!! GGACGATGAAGTTGATATAT+GGG - chr5.3:78511273-78511292 MS.gene38220:CDS 35.0%
!!! TGTGGTTTTTGGGTATTTAG+AGG - chr5.3:78511226-78511245 MS.gene38220:CDS 35.0%
AGTAGAGTCGTTCTTCAATG+GGG - chr5.3:78511081-78511100 MS.gene38220:CDS 40.0%
ATGATGTGCTATCTCACTTG+TGG - chr5.3:78510969-78510988 MS.gene38220:CDS 40.0%
CAAGTAGAGTCGTTCTTCAA+TGG - chr5.3:78511079-78511098 MS.gene38220:CDS 40.0%
TACCCAAAAACCACAACCTT+TGG + chr5.3:78511221-78511240 None:intergenic 40.0%
TACCTATGGAATCCATCCAT+TGG - chr5.3:78510821-78510840 MS.gene38220:CDS 40.0%
TCTACAAGTATGTGTTGCAG+AGG + chr5.3:78510630-78510649 None:intergenic 40.0%
TCTCATTGAGAGCTAATGTG+TGG - chr5.3:78510996-78511015 MS.gene38220:CDS 40.0%
TTTGTGCGTCTTCTTAAGCT+TGG + chr5.3:78511560-78511579 None:intergenic 40.0%
! TGTTTGTTACGTCCAATGGA+TGG + chr5.3:78510836-78510855 None:intergenic 40.0%
!! GGGACGATGAAGTTGATATA+TGG - chr5.3:78511272-78511291 MS.gene38220:CDS 40.0%
ATTGAGAGCTAATGTGTGGC+AGG - chr5.3:78511000-78511019 MS.gene38220:CDS 45.0%
CCAAATCTTGCTAAGGCTAC+CGG - chr5.3:78510511-78510530 MS.gene38220:CDS 45.0%
GTCACTGTCAGCTTGTCATT+GGG + chr5.3:78511538-78511557 None:intergenic 45.0%
TCACTGTCAGCTTGTCATTG+GGG + chr5.3:78511537-78511556 None:intergenic 45.0%
TCCACGTGCATCTTCACAAT+AGG + chr5.3:78511476-78511495 None:intergenic 45.0%
TCCTATTGTGAAGATGCACG+TGG - chr5.3:78511472-78511491 MS.gene38220:CDS 45.0%
TCTTCAATGGGGCTATTCAC+TGG - chr5.3:78511092-78511111 MS.gene38220:CDS 45.0%
TTGGTGCATGCTTCTACCTA+TGG - chr5.3:78510807-78510826 MS.gene38220:CDS 45.0%
! AACAGATGGTGGTACTGGAT+TGG - chr5.3:78511411-78511430 MS.gene38220:CDS 45.0%
! ATTGGAACAGATGGTGGTAC+TGG - chr5.3:78511406-78511425 MS.gene38220:CDS 45.0%
! GTCCAATGGATGGATTCCAT+AGG + chr5.3:78510826-78510845 None:intergenic 45.0%
!! AAATTAAAAATATAATCATT+AGG + chr5.3:78510872-78510891 None:intergenic 5.0%
!!! GATTATATTTTTAATTTATA+TGG - chr5.3:78510875-78510894 MS.gene38220:CDS 5.0%
AGATGCACGTGGATTCCGAT+TGG - chr5.3:78511483-78511502 MS.gene38220:CDS 50.0%
CAATGGGGCTATTCACTGGT+TGG - chr5.3:78511096-78511115 MS.gene38220:CDS 50.0%
GGTCACTGTCAGCTTGTCAT+TGG + chr5.3:78511539-78511558 None:intergenic 50.0%
! CCGGTAGCCTTAGCAAGATT+TGG + chr5.3:78510514-78510533 None:intergenic 50.0%
CGACTCTACTTGTCGAACCG+AGG + chr5.3:78511071-78511090 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 78510470 78511591 78510470 ID=MS.gene38220
chr5.3 mRNA 78510470 78511591 78510470 ID=MS.gene38220.t1;Parent=MS.gene38220
chr5.3 exon 78510470 78511591 78510470 ID=MS.gene38220.t1.exon1;Parent=MS.gene38220.t1
chr5.3 CDS 78510470 78511591 78510470 ID=cds.MS.gene38220.t1;Parent=MS.gene38220.t1
Gene Sequence

>MS.gene38220

ATGGAGAAGAAGAATCCATTGTTTCTACCTCATTTGATCATCCAAATCTTGCTAAGGCTACCGGTGAATTCACTTATTAGTCTCAAATGCGTTTGTAAGTCTTGGTTTTCTCTCATCTCTCATGATATCGACTTTGCAAATTCTAACTTTGAACTCACCTCTGCAACACATACTTGTAGAATTATGCTCATATTAACTCCACCTCTTAAAACTCAATCTATAGATATAGAGCTATCACTTTACGCTTCTGCTTCAATGAACAATAATTTTTTGTGTCCACAATCTTATTTCGATATTGAAATTAAAGGTTCGTGTAGAGGGTTTATACTTTTGCACTTTGGTGCATGCTTCTACCTATGGAATCCATCCATTGGACGTAACAAACAAATACCTTTGTCTCCTAATGATTATATTTTTAATTTATATGGTTTTGGGTATGATCACGCAACAGATGATTATTTAGTGGTTTCAATTTCCCGTGATCAAATTTCAAACTCAGATGATGTGCTATCTCACTTGTGGCTTTTCTCATTGAGAGCTAATGTGTGGCAGGAAATTGCATGCACAACCCGTTTGCCTTTTTATACTAATGTCTCTTCCTCGGTTCGACAAGTAGAGTCGTTCTTCAATGGGGCTATTCACTGGTTGGCTTTTCGTCATGATATATCTGACCAAGTTATTGTTGTCTTTCATTTAACGGAAAGGAAACTTCTAGAGATTCTTCTCCCAGTTGATATTAATTATAATTCCAAAGGTTGTGGTTTTTGGGTATTTAGAGGATTTCTCAGTCTATGGATTTTGAGGGACGATGAAGTTGATATATGGGTGATGAAAGAATACAAAGTGCATTCATCTTGGACTAAGACTCTTGTTCTTCCTATTTATGATGACATTCCCTACTTTTGCCCTTTATCCTATACAAAAAGTGGTGATATTATTGGAACAGATGGTGGTACTGGATTGGTGAAATATAACGACAAAGGAGAGATTCTAGAGCATAACTCCTATTGTGAAGATGCACGTGGATTCCGATTGGCTATGTATACAGAGTCATTGCTTTCGCTCCCCAATGACAAGCTGACAGTGACCAAGCTTAAGAAGACGCACAAACCAGAAGAATAA
Protein sequence

>MS.gene38220.t1

MEKKNPLFLPHLIIQILLRLPVNSLISLKCVCKSWFSLISHDIDFANSNFELTSATHTCRIMLILTPPLKTQSIDIELSLYASASMNNNFLCPQSYFDIEIKGSCRGFILLHFGACFYLWNPSIGRNKQIPLSPNDYIFNLYGFGYDHATDDYLVVSISRDQISNSDDVLSHLWLFSLRANVWQEIACTTRLPFYTNVSSSVRQVESFFNGAIHWLAFRHDISDQVIVVFHLTERKLLEILLPVDINYNSKGCGFWVFRGFLSLWILRDDEVDIWVMKEYKVHSSWTKTLVLPIYDDIPYFCPLSYTKSGDIIGTDGGTGLVKYNDKGEILEHNSYCEDARGFRLAMYTESLLSLPNDKLTVTKLKKTHKPEE