AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene032970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032970.t1 MTR_3g103020 63.488 367 124 7 3 365 14 374 4.16e-153 436
MS.gene032970.t1 MTR_4g109270 62.903 372 118 9 3 366 2 361 1.64e-146 419
MS.gene032970.t1 MTR_3g034180 60.789 380 125 10 1 365 115 485 5.54e-140 407
MS.gene032970.t1 MTR_4g109280 61.957 368 123 9 3 366 2 356 6.11e-134 387
MS.gene032970.t1 MTR_3g034160 59.737 380 129 11 1 365 1 371 7.65e-132 382
MS.gene032970.t1 MTR_3g034130 58.919 370 129 10 1 355 1 362 7.76e-131 379
MS.gene032970.t1 MTR_6g060650 60.753 372 123 10 9 366 8 370 3.04e-129 375
MS.gene032970.t1 MTR_4g117770 59.893 374 127 10 3 365 2 363 1.37e-128 373
MS.gene032970.t1 MTR_4g117810 59.893 374 127 10 3 365 2 363 1.37e-128 373
MS.gene032970.t1 MTR_4g122850 59.551 356 125 12 20 364 12 359 1.67e-128 374
MS.gene032970.t1 MTR_4g023080 57.995 369 134 9 1 366 1 351 5.07e-128 371
MS.gene032970.t1 MTR_4g023090 56.085 378 134 10 9 366 16 381 1.25e-127 372
MS.gene032970.t1 MTR_4g117780 59.290 366 129 11 8 365 10 363 2.63e-126 367
MS.gene032970.t1 MTR_4g094365 55.645 372 145 9 3 366 2 361 7.43e-124 361
MS.gene032970.t1 MTR_4g117720 55.676 370 112 10 3 363 45 371 1.20e-123 361
MS.gene032970.t1 MTR_4g021785 57.724 369 136 9 1 366 1 352 3.86e-123 359
MS.gene032970.t1 MTR_4g117850 58.678 363 129 10 9 362 23 373 5.75e-123 359
MS.gene032970.t1 MTR_4g023070 54.881 379 138 11 7 365 1 366 1.11e-119 351
MS.gene032970.t1 MTR_4g023120 53.562 379 143 11 7 365 1 366 3.34e-115 339
MS.gene032970.t1 MTR_8g433040 53.495 372 145 10 1 365 10 360 5.62e-115 338
MS.gene032970.t1 MTR_8g032380 53.495 372 145 10 1 365 10 360 5.62e-115 338
MS.gene032970.t1 MTR_4g116330 53.908 371 156 9 2 366 16 377 2.35e-113 335
MS.gene032970.t1 MTR_5g070080 52.604 384 151 10 3 363 4 379 2.37e-113 335
MS.gene032970.t1 MTR_4g118380 56.267 359 123 10 9 342 8 357 2.53e-113 334
MS.gene032970.t1 MTR_4g023380 52.850 386 127 10 9 366 16 374 1.41e-112 333
MS.gene032970.t1 MTR_5g097210 51.604 374 157 11 1 365 1 359 5.96e-111 329
MS.gene032970.t1 MTR_4g023190 53.887 373 145 12 2 366 3 356 3.29e-107 318
MS.gene032970.t1 MTR_5g070130 51.359 368 163 9 9 366 11 372 8.91e-107 318
MS.gene032970.t1 MTR_4g023130 51.639 366 121 10 1 366 1 310 2.09e-103 307
MS.gene032970.t1 MTR_1g055135 50.656 381 162 12 1 365 1 371 3.31e-102 306
MS.gene032970.t1 MTR_4g023150 52.547 373 151 12 2 366 3 357 5.28e-102 305
MS.gene032970.t1 MTR_4g023440 50.829 362 124 9 9 366 18 329 4.63e-101 302
MS.gene032970.t1 MTR_4g023200 52.707 351 140 12 23 365 24 356 1.78e-100 301
MS.gene032970.t1 MTR_5g070088 47.792 385 159 10 9 363 7 379 3.39e-99 299
MS.gene032970.t1 MTR_8g032390 49.724 362 143 11 9 363 40 369 4.72e-99 298
MS.gene032970.t1 MTR_4g117750 51.070 374 149 12 7 365 1 355 8.18e-98 299
MS.gene032970.t1 MTR_4g117750 59.813 107 43 0 259 365 373 479 3.71e-33 129
MS.gene032970.t1 MTR_4g121580 49.863 365 133 12 9 359 11 339 2.59e-94 287
MS.gene032970.t1 MTR_1g055165 47.027 370 134 10 2 366 3 315 2.04e-92 280
MS.gene032970.t1 MTR_8g013010 58.423 279 97 9 3 274 48 314 2.51e-92 279
MS.gene032970.t1 MTR_4g116330 47.709 371 140 9 2 366 16 338 7.18e-89 271
MS.gene032970.t1 MTR_4g117870 49.673 306 110 6 61 365 1 263 1.11e-87 265
MS.gene032970.t1 MTR_8g433030 46.518 359 126 11 9 363 40 336 3.03e-83 257
MS.gene032970.t1 MTR_1g055195 48.562 313 129 11 62 363 181 472 8.95e-76 242
MS.gene032970.t1 MTR_4g118400 50.342 292 104 10 80 363 36 294 3.44e-73 229
MS.gene032970.t1 MTR_7g079370 42.241 348 166 17 38 363 16 350 6.47e-65 210
MS.gene032970.t1 MTR_4g117430 65.854 164 44 4 107 270 3 154 2.08e-63 199
MS.gene032970.t1 MTR_8g040935 55.769 208 86 3 162 366 1 205 3.35e-63 201
MS.gene032970.t1 MTR_7g079400 44.062 320 151 13 64 366 26 334 4.09e-63 205
MS.gene032970.t1 MTR_2g048580 39.516 372 177 19 3 363 2 336 8.04e-62 202
MS.gene032970.t1 MTR_4g116320 54.545 220 87 6 151 365 43 254 1.95e-61 198
MS.gene032970.t1 MTR_4g118370 46.429 252 104 7 118 365 32 256 5.03e-60 194
MS.gene032970.t1 MTR_8g102520 39.939 328 154 11 44 363 24 316 1.05e-59 196
MS.gene032970.t1 MTR_4g117530 41.844 282 107 9 89 365 20 249 9.38e-56 183
MS.gene032970.t1 MTR_4g116340 49.785 233 83 9 12 234 39 247 4.13e-55 181
MS.gene032970.t1 MTR_6g463430 49.761 209 91 6 162 366 1 199 2.14e-51 170
MS.gene032970.t1 MTR_1g055175 48.731 197 88 8 174 365 9 197 4.87e-48 161
MS.gene032970.t1 MTR_4g114700 42.045 264 89 8 107 360 9 218 7.30e-48 162
MS.gene032970.t1 MTR_1g055250 42.991 214 110 8 146 356 49 253 6.92e-43 152
MS.gene032970.t1 MTR_4g109290 50.888 169 42 3 1 162 1 135 1.87e-41 144
MS.gene032970.t1 MTR_7g117720 48.744 199 70 9 1 188 1 178 8.65e-41 145
MS.gene032970.t1 MTR_7g117720 58.140 86 32 2 282 363 186 271 3.29e-18 84.0
MS.gene032970.t1 MTR_7g079420 38.603 272 115 12 106 363 905 1138 2.29e-40 152
MS.gene032970.t1 MTR_4g118360 57.937 126 45 5 244 365 1 122 5.58e-36 127
MS.gene032970.t1 MTR_5g069120 45.752 153 69 4 19 160 1 150 4.83e-34 124
MS.gene032970.t1 MTR_4g122860 37.668 223 97 6 145 363 130 314 1.96e-31 122
MS.gene032970.t1 MTR_4g122860 52.500 80 37 1 9 87 70 149 2.41e-13 70.9
MS.gene032970.t1 MTR_5g057790 31.356 354 204 13 9 350 46 372 3.24e-31 122
MS.gene032970.t1 MTR_8g098830 42.938 177 90 7 169 342 30 198 8.06e-31 117
MS.gene032970.t1 MTR_5g023000 62.222 90 34 0 276 365 6 95 1.97e-30 112
MS.gene032970.t1 MTR_1g068875 29.641 334 202 11 8 325 3 319 5.61e-30 118
MS.gene032970.t1 MTR_5g057690 30.199 351 202 13 9 350 46 362 1.79e-29 117
MS.gene032970.t1 MTR_2g021150 27.419 372 234 14 9 361 14 368 1.84e-29 117
MS.gene032970.t1 MTR_5g057710 31.034 377 213 16 9 364 46 396 6.95e-29 115
MS.gene032970.t1 MTR_1g094210 26.842 380 229 13 1 361 49 398 8.53e-29 115
MS.gene032970.t1 MTR_1g094210 27.451 357 211 12 1 338 49 376 1.17e-28 115
MS.gene032970.t1 MTR_2g426020 28.852 357 212 12 5 334 2 343 1.19e-28 115
MS.gene032970.t1 MTR_2g028160 29.917 361 206 16 6 330 2 351 8.07e-28 113
MS.gene032970.t1 MTR_3g007360 30.189 371 217 17 12 362 55 403 5.29e-27 110
MS.gene032970.t1 MTR_5g057020 32.143 308 171 13 9 308 46 323 1.15e-26 108
MS.gene032970.t1 MTR_5g022420 27.729 339 222 11 9 344 27 345 2.97e-26 108
MS.gene032970.t1 MTR_3g007410 30.909 330 187 16 12 323 55 361 5.38e-26 108
MS.gene032970.t1 MTR_2g024110 27.566 341 205 15 8 325 3 324 6.29e-26 107
MS.gene032970.t1 MTR_3g036290 31.183 372 205 20 9 364 22 358 6.92e-26 107
MS.gene032970.t1 MTR_1g097330 29.819 332 187 14 9 320 16 321 1.13e-25 107
MS.gene032970.t1 MTR_1g068835 28.990 307 186 9 8 299 3 292 1.13e-25 106
MS.gene032970.t1 MTR_3g007330 31.270 307 179 10 9 304 48 333 1.17e-25 107
MS.gene032970.t1 MTR_4g055060 30.547 311 178 10 9 299 30 322 1.95e-25 106
MS.gene032970.t1 MTR_4g133170 26.567 335 212 9 8 326 3 319 2.42e-25 105
MS.gene032970.t1 MTR_0667s0010 26.879 346 206 10 9 324 6 334 2.48e-25 106
MS.gene032970.t1 MTR_2g028130 29.310 348 193 15 8 317 4 336 4.84e-25 105
MS.gene032970.t1 MTR_2g055970 25.278 360 252 8 9 361 211 560 9.19e-25 105
MS.gene032970.t1 MTR_3g006670 29.483 329 199 11 9 323 49 358 1.13e-24 104
MS.gene032970.t1 MTR_3g010970 28.610 374 210 16 12 361 51 391 1.42e-24 103
MS.gene032970.t1 MTR_2g025420 26.630 368 215 10 9 334 6 360 2.69e-24 103
MS.gene032970.t1 MTR_4g061340 30.312 320 175 13 9 305 26 320 7.33e-24 101
MS.gene032970.t1 MTR_7g070830 27.793 367 198 14 9 320 21 375 8.54e-24 102
MS.gene032970.t1 MTR_4g107820 26.708 322 200 11 4 312 31 329 1.02e-23 101
MS.gene032970.t1 MTR_4g107780 26.708 322 200 11 4 312 31 329 1.02e-23 101
MS.gene032970.t1 MTR_4g107780 26.708 322 200 11 4 312 31 329 1.15e-23 101
MS.gene032970.t1 MTR_4g107820 26.708 322 200 11 4 312 31 329 1.17e-23 101
MS.gene032970.t1 MTR_7g070880 26.757 370 198 15 9 320 21 375 1.32e-23 101
MS.gene032970.t1 MTR_3g013740 28.698 338 170 16 9 306 44 350 1.37e-23 101
MS.gene032970.t1 MTR_8g467140 26.710 307 197 9 9 303 32 322 3.12e-23 99.4
MS.gene032970.t1 MTR_2g028140 28.571 329 182 13 6 294 2 317 3.39e-23 100
MS.gene032970.t1 MTR_6g034720 45.652 138 60 5 130 258 53 184 3.66e-23 96.3
MS.gene032970.t1 MTR_6g086825 26.933 401 238 15 9 366 70 458 4.98e-23 100
MS.gene032970.t1 MTR_5g096630 25.240 416 248 13 1 366 10 412 8.66e-23 99.0
MS.gene032970.t1 MTR_2g426070 27.708 397 228 15 10 366 7 384 8.90e-23 99.0
MS.gene032970.t1 MTR_2g426060 29.379 354 203 14 5 325 2 341 1.06e-22 99.0
MS.gene032970.t1 MTR_6g090180 26.536 407 241 13 2 362 40 434 1.51e-22 98.6
MS.gene032970.t1 MTR_2g021050 29.275 345 184 15 8 325 4 315 1.69e-22 97.8
MS.gene032970.t1 MTR_2g426090 27.463 335 208 10 12 320 9 334 1.97e-22 98.2
MS.gene032970.t1 MTR_4g070550 27.500 400 229 17 8 365 4 384 2.60e-22 97.4
MS.gene032970.t1 MTR_1g054725 25.661 378 234 12 9 361 20 375 2.66e-22 97.4
MS.gene032970.t1 MTR_3g083640 26.247 381 225 14 9 364 55 404 3.06e-22 97.4
MS.gene032970.t1 MTR_1g056710 28.339 307 187 13 2 294 27 314 3.26e-22 97.1
MS.gene032970.t1 MTR_4g023430 55.914 93 35 2 2 91 34 123 3.56e-22 94.0
MS.gene032970.t1 MTR_4g023430 37.288 118 56 3 255 366 114 219 1.82e-13 69.3
MS.gene032970.t1 MTR_5g011200 29.139 302 181 12 9 294 17 301 3.63e-22 96.7
MS.gene032970.t1 MTR_2g078900 28.947 304 183 12 9 300 33 315 4.69e-22 96.3
MS.gene032970.t1 MTR_8g101580 26.524 328 217 10 3 320 39 352 5.23e-22 96.7
MS.gene032970.t1 MTR_7g070440 29.664 327 175 16 12 306 10 313 1.04e-21 95.5
MS.gene032970.t1 MTR_3g014570 28.165 316 190 11 9 307 29 324 1.05e-21 95.5
MS.gene032970.t1 MTR_0044s0300 27.467 375 232 16 9 364 38 391 1.10e-21 95.5
MS.gene032970.t1 MTR_8g099460 27.193 342 210 9 7 324 3 329 1.21e-21 95.5
MS.gene032970.t1 MTR_7g079450 41.912 136 72 4 229 363 2 131 1.41e-21 89.7
MS.gene032970.t1 MTR_1g068860 27.273 308 194 8 7 299 2 294 1.54e-21 95.1
MS.gene032970.t1 MTR_3g030250 25.737 373 227 14 9 361 37 379 1.80e-21 94.7
MS.gene032970.t1 MTR_3g007430 30.263 304 166 13 12 294 46 324 1.95e-21 95.1
MS.gene032970.t1 MTR_1g097490 27.520 367 227 14 9 361 49 390 2.29e-21 94.7
MS.gene032970.t1 MTR_2g021770 28.155 412 234 16 1 362 4 403 3.18e-21 94.4
MS.gene032970.t1 MTR_7g055870 26.415 424 229 13 9 361 13 424 3.25e-21 94.7
MS.gene032970.t1 MTR_7g055930 26.415 424 229 14 9 361 13 424 3.32e-21 94.7
MS.gene032970.t1 MTR_3g030350 26.954 371 238 13 9 361 35 390 4.45e-21 94.0
MS.gene032970.t1 MTR_3g083010 28.288 403 228 16 9 363 6 395 4.82e-21 94.0
MS.gene032970.t1 MTR_6g027910 27.047 403 228 19 1 364 1 376 6.31e-21 93.2
MS.gene032970.t1 MTR_3g036430 28.184 369 208 17 9 364 20 344 6.65e-21 92.8
MS.gene032970.t1 MTR_2g046900 25.501 349 228 11 9 337 28 364 7.64e-21 93.2
MS.gene032970.t1 MTR_5g046300 27.090 299 194 10 9 300 4 285 9.36e-21 92.4
MS.gene032970.t1 MTR_5g046290 27.090 299 194 10 9 300 4 285 9.36e-21 92.4
MS.gene032970.t1 MTR_7g062100 27.595 395 222 15 9 361 24 396 9.61e-21 93.2
MS.gene032970.t1 MTR_7g057270 28.144 334 195 14 9 308 26 348 1.01e-20 93.2
MS.gene032970.t1 MTR_4g129190 26.257 358 204 14 7 320 4 345 1.04e-20 92.8
MS.gene032970.t1 MTR_0128s0020 28.000 400 215 21 9 360 18 392 1.62e-20 92.4
MS.gene032970.t1 MTR_2g028110 28.024 339 202 12 8 323 3 322 2.00e-20 92.0
MS.gene032970.t1 MTR_4g130330 27.342 395 236 15 4 359 2 384 2.16e-20 92.0
MS.gene032970.t1 MTR_7g407070 28.701 331 198 13 1 304 24 343 2.31e-20 92.0
MS.gene032970.t1 MTR_3g010870 27.441 379 218 16 9 361 37 384 2.40e-20 91.7
MS.gene032970.t1 MTR_3g009260 28.406 345 218 13 12 350 44 365 2.66e-20 91.7
MS.gene032970.t1 MTR_3g007270 27.596 366 214 13 9 347 47 388 2.70e-20 92.0
MS.gene032970.t1 MTR_3g010390 28.344 314 192 13 9 299 33 336 3.16e-20 91.7
MS.gene032970.t1 MTR_2g021190 29.766 299 182 10 9 294 21 304 3.47e-20 91.3
MS.gene032970.t1 MTR_3g010590 26.720 378 221 13 9 361 39 385 5.05e-20 90.9
MS.gene032970.t1 MTR_6g053260 27.901 362 219 12 8 355 336 669 5.33e-20 92.0
MS.gene032970.t1 MTR_3g014540 28.981 314 186 13 9 305 29 322 5.37e-20 90.9
MS.gene032970.t1 MTR_0128s0070 31.385 325 160 19 7 294 20 318 5.68e-20 90.9
MS.gene032970.t1 MTR_0760s0010 30.137 292 172 13 14 296 52 320 7.07e-20 90.5
MS.gene032970.t1 MTR_3g010430 25.722 381 236 12 9 364 36 394 8.18e-20 90.5
MS.gene032970.t1 MTR_3g011100 27.937 383 230 14 9 361 235 601 8.93e-20 91.3
MS.gene032970.t1 MTR_6g065980 29.252 294 177 12 9 296 16 284 9.14e-20 89.7
MS.gene032970.t1 MTR_3g009240 28.329 353 217 14 9 350 36 363 1.14e-19 89.7
MS.gene032970.t1 MTR_4g013180 27.869 366 224 13 9 340 11 370 1.27e-19 90.5
MS.gene032970.t1 MTR_2g038680 24.138 406 244 12 8 362 15 407 1.44e-19 89.7
MS.gene032970.t1 MTR_2g046920 26.797 306 196 10 9 303 24 312 1.62e-19 89.4
MS.gene032970.t1 MTR_7g017040 26.700 397 230 14 9 362 16 394 1.81e-19 89.4
MS.gene032970.t1 MTR_2g021252 24.044 366 233 11 12 362 50 385 1.90e-19 89.4
MS.gene032970.t1 MTR_7g077970 29.446 343 190 14 9 309 7 339 2.05e-19 89.4
MS.gene032970.t1 MTR_8g046310 26.133 375 236 13 12 363 19 375 2.30e-19 89.0
MS.gene032970.t1 MTR_2g031680 27.213 305 189 9 9 298 6 292 2.57e-19 89.0
MS.gene032970.t1 MTR_2g021155 29.508 305 189 11 1 294 28 317 2.82e-19 90.1
MS.gene032970.t1 MTR_2g021155 28.708 209 120 10 100 294 689 882 7.79e-11 64.3
MS.gene032970.t1 MTR_7g007300 28.013 307 173 13 4 294 100 374 3.29e-19 89.0
MS.gene032970.t1 MTR_8g464770 25.781 384 238 14 9 363 12 377 4.08e-19 88.2
MS.gene032970.t1 MTR_5g069390 25.377 398 239 15 9 360 26 411 4.71e-19 88.6
MS.gene032970.t1 MTR_2g031720 26.823 384 234 11 9 365 6 369 5.57e-19 87.8
MS.gene032970.t1 MTR_2g025960 28.571 252 144 7 100 324 1 243 5.58e-19 86.7
MS.gene032970.t1 MTR_3g010620 26.479 355 210 16 12 353 39 355 6.46e-19 87.8
MS.gene032970.t1 MTR_7g017130 26.699 412 216 17 8 366 17 395 6.89e-19 87.8
MS.gene032970.t1 MTR_7g066100 27.492 331 193 12 9 303 11 330 7.01e-19 87.4
MS.gene032970.t1 MTR_7g066000 27.139 339 215 14 9 320 25 358 7.32e-19 87.4
MS.gene032970.t1 MTR_3g013770 28.571 308 177 13 9 294 33 319 7.53e-19 87.4
MS.gene032970.t1 MTR_5g069760 24.706 340 210 11 9 320 6 327 8.63e-19 87.0
MS.gene032970.t1 MTR_2g026010 26.823 384 238 13 8 366 3 368 8.65e-19 87.4
MS.gene032970.t1 MTR_5g046260 25.424 295 174 11 9 300 4 255 1.16e-18 85.9
MS.gene032970.t1 MTR_5g069930 25.356 351 209 12 5 320 2 334 1.18e-18 86.7
MS.gene032970.t1 MTR_4g014370 24.697 413 240 17 9 366 11 407 1.21e-18 87.0
MS.gene032970.t1 MTR_4g102410 23.096 407 253 13 2 362 54 446 1.28e-18 87.0
MS.gene032970.t1 MTR_5g007610 26.667 330 188 13 1 300 33 338 1.50e-18 86.7
MS.gene032970.t1 MTR_3g006570 26.632 383 229 17 9 364 21 378 1.52e-18 86.7
MS.gene032970.t1 MTR_3g009310 29.221 308 179 13 9 299 42 327 1.65e-18 86.7
MS.gene032970.t1 MTR_5g096710 30.448 335 173 14 9 307 23 333 1.70e-18 86.7
MS.gene032970.t1 MTR_1g115160 27.027 370 232 16 7 361 20 366 2.05e-18 85.9
MS.gene032970.t1 MTR_6g053240 25.753 365 228 11 8 355 27 365 2.14e-18 86.3
MS.gene032970.t1 MTR_2g029990 26.359 368 243 14 10 364 52 404 2.26e-18 86.3
MS.gene032970.t1 MTR_1g055070 27.536 276 158 11 2 248 42 304 2.32e-18 85.9
MS.gene032970.t1 MTR_2g461450 27.083 336 198 13 9 320 18 330 2.33e-18 85.5
MS.gene032970.t1 MTR_4g037465 27.676 383 210 18 9 347 21 380 3.11e-18 85.9
MS.gene032970.t1 MTR_5g009060 30.120 332 176 18 9 298 25 342 3.40e-18 85.5
MS.gene032970.t1 MTR_7g078900 27.040 429 217 18 11 362 14 423 3.41e-18 85.9
MS.gene032970.t1 MTR_0097s0030 28.212 358 183 16 5 320 10 335 4.44e-18 85.1
MS.gene032970.t1 MTR_2g047240 28.212 358 183 16 5 320 10 335 4.44e-18 85.1
MS.gene032970.t1 MTR_3g036335 24.138 377 239 15 9 361 41 394 5.33e-18 85.1
MS.gene032970.t1 MTR_2g425980 27.726 321 190 11 8 298 4 312 5.89e-18 85.1
MS.gene032970.t1 MTR_6g021880 28.750 320 179 14 20 311 31 329 5.93e-18 84.7
MS.gene032970.t1 MTR_7g078860 27.717 368 218 13 1 331 1 357 5.94e-18 84.7
MS.gene032970.t1 MTR_5g021860 25.414 362 194 12 8 306 29 377 6.04e-18 85.5
MS.gene032970.t1 MTR_6g079810 24.819 415 240 16 2 362 63 459 6.08e-18 85.1
MS.gene032970.t1 MTR_7g028660 26.087 391 230 16 9 362 11 379 8.06e-18 84.3
MS.gene032970.t1 MTR_5g021860 25.414 362 194 12 8 306 29 377 8.89e-18 84.7
MS.gene032970.t1 MTR_5g057643 30.942 223 134 7 9 221 46 258 9.09e-18 82.8
MS.gene032970.t1 MTR_2g031640 27.003 337 204 12 9 323 6 322 1.09e-17 84.0
MS.gene032970.t1 MTR_7g078040 28.451 355 187 14 9 309 9 350 1.11e-17 84.3
MS.gene032970.t1 MTR_3g023930 27.747 364 222 14 9 361 34 367 1.30e-17 83.6
MS.gene032970.t1 MTR_4g030830 26.225 408 239 14 1 361 1 393 1.69e-17 83.6
MS.gene032970.t1 MTR_3g072470 27.708 397 202 20 12 355 22 386 1.72e-17 83.6
MS.gene032970.t1 MTR_4g080200 28.155 309 176 13 7 296 1 282 1.72e-17 83.2
MS.gene032970.t1 MTR_1g097560 26.400 375 219 19 8 361 35 373 1.76e-17 83.2
MS.gene032970.t1 MTR_2g104340 26.799 403 236 17 2 362 7 392 1.80e-17 83.6
MS.gene032970.t1 MTR_2g021210 27.027 296 183 10 9 294 84 356 2.49e-17 83.2
MS.gene032970.t1 MTR_1g050542 23.077 299 210 6 9 303 58 340 3.75e-17 82.4
MS.gene032970.t1 MTR_7g078840 29.261 352 187 16 9 307 10 352 3.80e-17 82.8
MS.gene032970.t1 MTR_7g445890 26.196 397 219 18 9 361 16 382 3.81e-17 82.4
MS.gene032970.t1 MTR_4g024890 25.831 391 234 18 10 361 11 384 4.20e-17 82.4
MS.gene032970.t1 MTR_7g079640 27.297 370 223 15 1 344 5 354 4.40e-17 82.0
MS.gene032970.t1 MTR_4g117550 25.250 400 218 15 3 362 11 369 4.45e-17 82.0
MS.gene032970.t1 MTR_3g010520 26.344 372 218 18 9 361 25 359 4.48e-17 82.0
MS.gene032970.t1 MTR_1g068905 27.711 249 143 6 8 248 3 222 4.54e-17 81.3
MS.gene032970.t1 MTR_8g073550 31.937 191 116 5 9 189 30 216 4.60e-17 80.1
MS.gene032970.t1 MTR_5g037680 26.010 396 228 18 9 361 8 381 4.67e-17 82.4
MS.gene032970.t1 MTR_4g031770 24.935 385 237 12 9 361 4 368 4.76e-17 82.0
MS.gene032970.t1 MTR_3g024150 26.455 378 220 14 12 361 38 385 4.83e-17 82.0
MS.gene032970.t1 MTR_1g088120 27.887 355 205 14 12 326 13 356 5.03e-17 82.4
MS.gene032970.t1 MTR_6g007135 26.797 306 201 9 9 300 26 322 5.65e-17 82.0
MS.gene032970.t1 MTR_5g097350 25.459 381 226 16 18 362 25 383 5.77e-17 82.0
MS.gene032970.t1 MTR_3g436150 28.931 318 192 12 9 304 32 337 6.58e-17 81.6
MS.gene032970.t1 MTR_7g017170 25.236 424 219 17 8 366 17 407 1.05e-16 81.3
MS.gene032970.t1 MTR_8g063440 22.513 382 254 13 9 362 12 379 1.08e-16 80.9
MS.gene032970.t1 MTR_1g007450 24.619 394 238 16 2 352 5 382 1.16e-16 81.3
MS.gene032970.t1 MTR_1g055375 24.397 373 246 13 12 361 7 366 1.26e-16 80.9
MS.gene032970.t1 MTR_0064s0160 26.994 326 189 14 9 296 42 356 1.31e-16 81.3
MS.gene032970.t1 MTR_6g004660 28.205 312 197 11 9 302 16 318 1.40e-16 80.9
MS.gene032970.t1 MTR_3g011060 26.168 321 186 11 9 300 28 326 1.53e-16 80.5
MS.gene032970.t1 MTR_0129s0050 23.877 423 233 13 3 362 8 404 2.03e-16 80.5
MS.gene032970.t1 MTR_0129s0070 24.198 405 243 16 1 362 9 392 2.29e-16 80.1
MS.gene032970.t1 MTR_2g024100 27.532 316 179 13 11 294 9 306 2.58e-16 80.1
MS.gene032970.t1 MTR_5g048160 25.879 398 240 18 8 362 3 388 2.69e-16 80.1
MS.gene032970.t1 MTR_2g031700 27.059 255 152 7 9 253 6 236 2.69e-16 79.0
MS.gene032970.t1 MTR_7g013590 30.033 303 171 12 12 294 39 320 3.24e-16 79.7
MS.gene032970.t1 MTR_2g021800 25.542 415 230 18 9 362 16 412 3.39e-16 79.7
MS.gene032970.t1 MTR_7g056503 24.416 385 251 14 9 361 21 397 3.47e-16 79.7
MS.gene032970.t1 MTR_1g054575 25.658 304 178 9 9 293 52 326 3.66e-16 80.5
MS.gene032970.t1 MTR_8g013005 67.925 53 17 0 311 363 1 53 3.77e-16 72.4
MS.gene032970.t1 MTR_0242s0060 28.161 348 184 16 9 309 9 337 3.86e-16 79.7
MS.gene032970.t1 MTR_0242s0040 28.161 348 184 16 9 309 9 337 3.86e-16 79.7
MS.gene032970.t1 MTR_3g030330 26.121 379 227 15 9 361 20 371 5.72e-16 79.0
MS.gene032970.t1 MTR_7g055830 25.124 402 194 12 9 361 13 356 5.95e-16 78.6
MS.gene032970.t1 MTR_5g008530 66.667 57 18 1 7 62 16 72 6.15e-16 72.4
MS.gene032970.t1 MTR_0115s0020 26.791 321 196 13 8 296 9 322 7.08e-16 78.6
MS.gene032970.t1 MTR_6g016285 24.877 406 243 13 9 361 21 417 7.96e-16 79.0
MS.gene032970.t1 MTR_5g057040 31.915 188 117 5 9 188 46 230 8.19e-16 79.7
MS.gene032970.t1 MTR_3g058470 26.247 381 214 15 8 364 36 373 9.41e-16 78.2
MS.gene032970.t1 MTR_3g006500 25.195 385 240 14 1 361 9 369 9.43e-16 78.2
MS.gene032970.t1 MTR_3g010920 26.829 369 223 17 9 361 44 381 9.43e-16 78.2
MS.gene032970.t1 MTR_4g028660 23.810 399 240 14 9 362 16 395 9.52e-16 78.2
MS.gene032970.t1 MTR_4g027450 23.810 399 240 14 9 362 16 395 9.52e-16 78.2
MS.gene032970.t1 MTR_3g011650 33.149 181 111 5 12 187 82 257 9.99e-16 77.0
MS.gene032970.t1 MTR_3g011020 27.778 324 174 13 9 308 28 315 1.08e-15 78.2
MS.gene032970.t1 MTR_3g006530 24.219 384 238 16 9 364 40 398 1.08e-15 78.2
MS.gene032970.t1 MTR_7g061050 27.301 326 192 11 9 307 13 320 1.12e-15 78.2
MS.gene032970.t1 MTR_1g055145 52.222 90 38 3 19 105 43 130 1.78e-15 76.3
MS.gene032970.t1 MTR_7g062060 25.723 346 198 12 9 309 12 343 2.07e-15 77.4
MS.gene032970.t1 MTR_2g010920 23.990 421 252 16 1 361 12 424 3.43e-15 76.6
MS.gene032970.t1 MTR_7g061060 26.957 345 204 12 9 320 13 342 3.49e-15 76.6
MS.gene032970.t1 MTR_6g048120 25.868 317 194 9 1 294 28 326 3.59e-15 76.6
MS.gene032970.t1 MTR_6g017280 26.000 350 207 14 9 320 9 344 3.59e-15 76.6
MS.gene032970.t1 MTR_5g068040 26.183 317 188 11 12 306 19 311 3.98e-15 76.3
MS.gene032970.t1 MTR_7g067680 26.623 308 159 10 9 294 49 311 4.12e-15 76.3
MS.gene032970.t1 MTR_6g478230 25.126 398 233 16 12 366 30 405 4.48e-15 76.3
MS.gene032970.t1 MTR_3g024040 26.756 299 189 13 16 307 38 313 4.69e-15 76.3
MS.gene032970.t1 MTR_3g464500 25.888 394 233 15 9 361 27 402 4.69e-15 76.3
MS.gene032970.t1 MTR_7g056170 24.274 379 183 14 9 320 75 416 5.28e-15 76.3
MS.gene032970.t1 MTR_3g007300 28.571 308 166 13 9 308 49 310 5.38e-15 75.9
MS.gene032970.t1 MTR_2g078850 27.152 302 188 12 12 300 33 315 5.74e-15 75.9
MS.gene032970.t1 MTR_6g055210 28.571 329 170 15 9 293 22 329 5.87e-15 76.3
MS.gene032970.t1 MTR_6g034830 41.593 113 54 3 1 113 12 112 6.00e-15 70.9
MS.gene032970.t1 MTR_1g442850 27.612 402 205 22 12 361 8 375 6.09e-15 75.9
MS.gene032970.t1 MTR_4g030090 25.377 398 238 13 10 361 15 399 8.27e-15 75.5
MS.gene032970.t1 MTR_3g024110 25.246 305 189 10 9 300 101 379 8.46e-15 75.9
MS.gene032970.t1 MTR_1g112930 26.910 301 178 15 9 293 25 299 8.79e-15 75.5
MS.gene032970.t1 MTR_1g037540 25.459 381 225 19 12 343 8 378 8.82e-15 75.5
MS.gene032970.t1 MTR_2g047832 24.523 367 221 12 9 337 29 377 1.22e-14 75.1
MS.gene032970.t1 MTR_3g058480 30.483 269 150 12 8 255 38 290 1.26e-14 74.3
MS.gene032970.t1 MTR_2g046830 26.452 310 186 13 12 303 28 313 1.84e-14 74.3
MS.gene032970.t1 MTR_7g060960 26.984 315 167 12 9 303 32 303 1.94e-14 74.3
MS.gene032970.t1 MTR_5g023570 39.091 110 53 3 9 113 37 137 2.23e-14 70.1
MS.gene032970.t1 MTR_4g033495 24.444 360 213 15 9 325 27 370 2.30e-14 74.3
MS.gene032970.t1 MTR_0267s0050 24.490 343 215 13 12 320 9 341 2.47e-14 73.9
MS.gene032970.t1 MTR_8g062660 26.888 331 161 14 9 298 22 312 2.89e-14 74.7
MS.gene032970.t1 MTR_7g056760 24.156 385 257 13 9 361 23 404 3.03e-14 73.9
MS.gene032970.t1 MTR_3g058440 29.958 237 133 10 8 224 34 257 3.92e-14 72.8
MS.gene032970.t1 MTR_3g009250 32.597 181 111 5 12 187 44 218 3.98e-14 71.6
MS.gene032970.t1 MTR_3g013950 22.843 394 248 15 12 364 9 387 4.45e-14 73.2
MS.gene032970.t1 MTR_4g013175 28.496 379 181 15 12 320 13 371 4.72e-14 73.6
MS.gene032970.t1 MTR_7g060940 25.679 405 226 17 3 360 16 392 5.01e-14 73.2
MS.gene032970.t1 MTR_2g104280 25.806 403 235 16 9 362 14 401 7.50e-14 72.8
MS.gene032970.t1 MTR_7g050520 27.103 321 169 12 9 294 22 312 8.01e-14 72.4
MS.gene032970.t1 MTR_0054s0090 23.325 403 227 14 17 362 25 402 9.21e-14 72.4
MS.gene032970.t1 MTR_5g056020 26.077 418 230 17 9 361 17 420 9.21e-14 72.8
MS.gene032970.t1 MTR_7g050480 27.414 321 168 12 9 294 22 312 9.36e-14 72.4
MS.gene032970.t1 MTR_7g056737 27.545 334 177 15 5 303 18 321 1.00e-13 72.4
MS.gene032970.t1 MTR_1g055200 46.914 81 38 2 103 180 5 83 1.02e-13 67.0
MS.gene032970.t1 MTR_7g056710 25.948 343 204 15 9 320 18 341 1.19e-13 72.0
MS.gene032970.t1 MTR_7g055987 27.378 347 178 16 12 318 23 335 1.66e-13 71.2
MS.gene032970.t1 MTR_7g066850 23.706 367 225 13 9 338 23 371 1.77e-13 71.6
MS.gene032970.t1 MTR_5g097680 23.148 432 245 16 1 362 9 423 1.96e-13 71.6
MS.gene032970.t1 MTR_6g080680 22.943 401 242 14 3 360 13 389 2.07e-13 71.2
MS.gene032970.t1 MTR_2g046800 27.711 332 172 16 9 294 14 323 2.47e-13 70.9
MS.gene032970.t1 MTR_7g061090 26.225 347 184 16 9 307 22 344 2.61e-13 70.9
MS.gene032970.t1 MTR_7g077990 24.432 352 216 11 9 330 17 348 2.62e-13 70.9
MS.gene032970.t1 MTR_4g013185 27.688 372 193 16 12 320 13 371 2.66e-13 71.2
MS.gene032970.t1 MTR_2g043410 25.604 414 222 15 12 361 25 416 3.46e-13 70.9
MS.gene032970.t1 MTR_6g079770 25.659 417 221 17 12 362 20 413 3.90e-13 70.5
MS.gene032970.t1 MTR_4g030110 26.567 335 179 14 9 312 30 328 4.25e-13 70.1
MS.gene032970.t1 MTR_1g055055 25.974 308 182 9 9 304 26 299 4.56e-13 69.7
MS.gene032970.t1 MTR_7g035295 26.039 361 178 16 9 320 16 336 5.49e-13 70.1
MS.gene032970.t1 MTR_6g017270 29.648 199 117 9 9 188 9 203 5.52e-13 69.7
MS.gene032970.t1 MTR_6g013270 25.705 319 197 11 9 308 29 326 6.03e-13 69.7
MS.gene032970.t1 MTR_0707s0020 24.312 436 237 18 7 363 24 445 7.77e-13 69.7
MS.gene032970.t1 MTR_1g071010 23.404 235 164 7 10 233 16 245 8.01e-13 69.3
MS.gene032970.t1 MTR_6g048140 30.063 316 160 16 9 294 39 323 8.46e-13 69.3
MS.gene032970.t1 MTR_8g041270 25.304 411 241 15 2 362 8 402 9.16e-13 69.3
MS.gene032970.t1 MTR_3g464470 23.350 394 240 13 9 361 7 379 1.15e-12 68.9
MS.gene032970.t1 MTR_7g056003 27.778 360 189 18 12 320 18 357 1.30e-12 68.9
MS.gene032970.t1 MTR_7g091630 24.465 327 205 12 9 303 32 348 1.59e-12 68.9
MS.gene032970.t1 MTR_6g461660 24.316 329 197 11 12 300 22 338 1.70e-12 68.6
MS.gene032970.t1 MTR_7g055977 25.496 353 201 16 9 320 7 338 2.00e-12 68.2
MS.gene032970.t1 MTR_6g004210 25.316 316 190 12 20 300 36 340 2.14e-12 68.2
MS.gene032970.t1 MTR_7g016930 25.697 323 171 13 9 295 16 305 2.66e-12 67.4
MS.gene032970.t1 MTR_7g037670 28.750 240 139 11 9 237 23 241 2.71e-12 67.4
MS.gene032970.t1 MTR_5g072060 27.642 369 212 20 5 341 2 347 4.82e-12 67.8
MS.gene032970.t1 MTR_7g056717 26.748 329 168 15 14 303 27 321 4.97e-12 67.0
MS.gene032970.t1 MTR_3g080370 23.214 392 239 11 23 361 35 417 5.66e-12 67.0
MS.gene032970.t1 MTR_2g437110 23.618 398 232 14 9 361 22 392 5.69e-12 67.4
MS.gene032970.t1 MTR_4g019990 23.754 341 201 12 9 311 6 325 6.25e-12 66.6
MS.gene032970.t1 MTR_3g010440 32.353 136 86 3 9 138 26 161 6.26e-12 66.2
MS.gene032970.t1 MTR_7g056200 24.348 345 196 12 9 320 23 335 6.32e-12 66.6
MS.gene032970.t1 MTR_0054s0100 23.618 398 234 13 17 362 25 404 6.37e-12 66.6
MS.gene032970.t1 MTR_2g010950 22.025 395 260 13 7 361 18 404 6.85e-12 66.6
MS.gene032970.t1 MTR_4g028750 24.806 387 228 14 2 344 9 376 7.69e-12 66.6
MS.gene032970.t1 MTR_7g055850 29.148 223 118 7 9 194 13 232 8.83e-12 65.5
MS.gene032970.t1 MTR_2g066200 24.566 403 239 17 2 362 5 384 8.96e-12 66.2
MS.gene032970.t1 MTR_7g066030 23.383 402 241 16 9 362 21 403 9.95e-12 66.2
MS.gene032970.t1 MTR_8g033140 23.741 417 232 14 9 361 19 413 1.05e-11 66.2
MS.gene032970.t1 MTR_2g078870 26.545 275 164 15 105 364 58 309 1.06e-11 65.5
MS.gene032970.t1 MTR_2g021950 23.773 387 247 13 12 362 19 393 1.09e-11 65.9
MS.gene032970.t1 MTR_3g023940 23.784 370 245 10 9 361 34 383 1.10e-11 65.9
MS.gene032970.t1 MTR_0649s0020 24.623 398 234 18 9 361 11 387 1.12e-11 65.9
MS.gene032970.t1 MTR_3g010870 29.016 193 112 7 9 188 37 217 1.14e-11 65.5
MS.gene032970.t1 MTR_1g061330 24.119 369 249 13 9 362 4 356 1.18e-11 65.9
MS.gene032970.t1 MTR_6g086920 24.390 451 232 20 7 363 36 471 1.22e-11 66.2
MS.gene032970.t1 MTR_7g091640 26.524 328 193 15 9 303 35 347 1.28e-11 65.9
MS.gene032970.t1 MTR_4g030760 28.293 205 113 7 3 188 67 256 1.57e-11 65.9
MS.gene032970.t1 MTR_1g115185 27.090 299 190 12 9 294 39 322 1.87e-11 65.5
MS.gene032970.t1 MTR_8g101940 24.615 390 231 16 9 360 2 366 1.91e-11 65.1
MS.gene032970.t1 MTR_7g066060 24.029 412 226 15 9 361 23 406 2.05e-11 65.5
MS.gene032970.t1 MTR_3g030310 26.198 313 189 15 9 300 21 312 2.05e-11 65.1
MS.gene032970.t1 MTR_7g077910 28.947 228 127 10 102 307 42 256 2.14e-11 64.7
MS.gene032970.t1 MTR_4g006270 25.193 389 226 18 8 365 3 357 2.22e-11 65.1
MS.gene032970.t1 MTR_4g024870 24.096 249 161 7 10 236 45 287 2.35e-11 65.1
MS.gene032970.t1 MTR_2g010900 23.453 307 205 10 27 307 1 303 2.35e-11 65.1
MS.gene032970.t1 MTR_6g079790 23.151 311 193 10 87 360 2 303 2.56e-11 64.3
MS.gene032970.t1 MTR_3g096250 32.317 164 97 6 9 162 47 206 3.38e-11 64.3
MS.gene032970.t1 MTR_5g096900 27.586 319 171 13 9 285 12 312 4.48e-11 63.5
MS.gene032970.t1 MTR_2g022170 32.836 134 74 4 8 137 3 124 4.48e-11 60.5
MS.gene032970.t1 MTR_5g097820 30.579 242 128 12 9 219 23 255 4.56e-11 63.2
MS.gene032970.t1 MTR_2g047892 25.545 321 183 16 9 294 22 321 7.53e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene032970.t1 AT3G06240 30.049 406 209 18 9 361 36 419 3.13e-32 125
MS.gene032970.t1 AT3G23880 30.284 317 190 13 8 311 13 311 4.41e-25 105
MS.gene032970.t1 AT4G12560 28.499 393 223 17 9 366 4 373 5.63e-24 102
MS.gene032970.t1 AT4G12560 28.499 393 223 17 9 366 4 373 5.63e-24 102
MS.gene032970.t1 AT4G12560 28.499 393 223 17 9 366 4 373 5.63e-24 102
MS.gene032970.t1 AT4G22390 25.131 382 248 14 8 366 3 369 1.12e-18 87.0
MS.gene032970.t1 AT4G22390 25.131 382 248 14 8 366 3 369 1.37e-18 87.0
MS.gene032970.t1 AT3G16210 28.383 303 174 13 9 302 5 273 7.88e-17 81.3
MS.gene032970.t1 AT4G19940 25.294 340 219 13 8 324 34 361 1.46e-16 80.9
MS.gene032970.t1 AT5G62510 26.452 310 195 11 8 301 43 335 2.40e-16 80.5
MS.gene032970.t1 AT1G30790 25.962 312 204 11 1 294 1 303 5.62e-15 76.3
MS.gene032970.t1 AT2G40925 26.070 257 159 9 8 250 26 265 5.00e-14 73.2
MS.gene032970.t1 AT5G62660 26.056 284 156 10 8 263 40 297 1.50e-13 71.6
MS.gene032970.t1 AT1G33530 24.699 332 192 14 2 309 90 387 1.93e-13 71.6
MS.gene032970.t1 AT1G11270 28.099 242 129 11 9 227 35 254 1.60e-12 68.2
MS.gene032970.t1 AT1G11270 28.099 242 129 11 9 227 35 254 1.60e-12 68.2
MS.gene032970.t1 AT3G52320 27.832 309 192 12 8 303 26 316 2.20e-12 68.2
MS.gene032970.t1 AT2G40910 27.823 248 151 10 8 241 61 294 2.78e-12 68.2
MS.gene032970.t1 AT2G16220 26.409 337 202 13 9 320 6 321 3.39e-12 67.8
MS.gene032970.t1 AT2G40910 27.823 248 151 10 8 241 68 301 3.77e-12 67.8
MS.gene032970.t1 AT3G21120 29.442 197 116 11 7 189 1 188 5.25e-12 67.0
MS.gene032970.t1 AT1G47790 25.490 255 168 9 1 249 17 255 1.24e-11 65.9
MS.gene032970.t1 AT1G47340 24.058 345 213 13 7 325 4 325 1.83e-11 65.5
MS.gene032970.t1 AT1G47340 24.058 345 213 13 7 325 4 325 1.83e-11 65.5
MS.gene032970.t1 AT1G47340 24.058 345 213 13 7 325 35 356 2.04e-11 65.5
MS.gene032970.t1 AT2G40920 25.735 272 163 12 2 250 43 298 2.39e-11 65.1
MS.gene032970.t1 AT3G59610 28.772 285 173 15 8 285 7 268 3.24e-11 65.1
MS.gene032970.t1 AT5G50220 25.753 299 160 16 7 294 31 278 4.31e-11 63.9
MS.gene032970.t1 AT1G11270 33.846 130 74 4 9 134 35 156 5.91e-11 62.4
MS.gene032970.t1 AT3G16590 27.673 318 188 15 9 304 5 302 6.53e-11 63.5
MS.gene032970.t1 AT2G17310 25.127 394 230 17 7 363 1 366 7.57e-11 63.5

Find 77 sgRNAs with CRISPR-Local

Find 79 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGAGAATTTCTTAGTTTA+TGG 0.111007 8.4:+16407614 MS.gene032970:CDS
TATCTAAATCTTGAAATTAA+AGG 0.155978 8.4:+16407118 MS.gene032970:CDS
GCAGAATATTTCTATGGTTT+TGG 0.171498 8.4:+16407253 MS.gene032970:CDS
AAAATGTGAATTAGCAAAAT+TGG 0.175629 8.4:-16406957 None:intergenic
GTCATGATTCACGTTTATTA+AGG 0.188886 8.4:+16407491 MS.gene032970:CDS
CAAATACCTTTCTCTCCTTT+TGG 0.234460 8.4:+16407217 MS.gene032970:CDS
TATTGTGGTTTGTGGGTATT+TGG 0.253702 8.4:+16407595 MS.gene032970:CDS
ATATTGATACAATTGAAATA+TGG 0.279816 8.4:+16407650 MS.gene032970:CDS
TGGAGAATTTCTTAGTTTAT+GGG 0.300088 8.4:+16407615 MS.gene032970:CDS
TATTGTTGTCTTTGATTTAA+CGG 0.303490 8.4:+16407519 MS.gene032970:CDS
TCAAGATTTAGATAAGATTC+AGG 0.316081 8.4:-16407109 None:intergenic
TGATGATTCAAATCCTTCTA+AGG 0.317919 8.4:+16406867 MS.gene032970:CDS
TACTAATATTTCATCGCAAT+TGG 0.320204 8.4:+16407330 MS.gene032970:CDS
GAAATATTCTGCATATAAAC+TGG 0.351251 8.4:-16407242 None:intergenic
ACTTCACCGGTAACCTTAGA+AGG 0.358560 8.4:-16406880 None:intergenic
TGTTTGTGAAATCCAGTAGA+TGG 0.361261 8.4:-16407196 None:intergenic
TATTGATACAATTGAAATAT+GGG 0.363603 8.4:+16407651 MS.gene032970:CDS
ATTGAAACGGATGGTGATAC+TGG 0.365020 8.4:+16407787 MS.gene032970:CDS
TTATATGCAGAATATTTCTA+TGG 0.367225 8.4:+16407247 MS.gene032970:CDS
TCATGATTCACGTTTATTAA+GGG 0.367232 8.4:+16407492 MS.gene032970:CDS
CCTCAATGGGATTGCTATAA+CGG 0.368433 8.4:-16407411 None:intergenic
TCAAATCCTTCTAAGGTTAC+CGG 0.386697 8.4:+16406874 MS.gene032970:CDS
GGATTCCAGAGGTATTTGTT+TGG 0.408420 8.4:-16407175 None:intergenic
TCAAATGCGTTTCTAAGTCT+TGG 0.413160 8.4:+16406915 MS.gene032970:CDS
TGCGATGAAATATTAGTAAC+CGG 0.431931 8.4:-16407325 None:intergenic
AATACAAAATGCCTTCATCT+TGG 0.434813 8.4:+16407683 MS.gene032970:CDS
TATTTAATGAGGCTATTCAT+TGG 0.437891 8.4:+16407458 MS.gene032970:CDS
GGTTTCAATGCTCATTGATC+CGG 0.441203 8.4:+16407306 MS.gene032970:CDS
CTTAGGCTGCTCATCCTCAA+TGG 0.445603 8.4:-16407425 None:intergenic
TTAAATAGCAACCCCGGCTT+AGG 0.449345 8.4:-16407442 None:intergenic
AACTTGACTATTGTGGTTTG+TGG 0.450962 8.4:+16407587 MS.gene032970:CDS
AACCACAATAGTCAAGTTGA+TGG 0.467522 8.4:-16407582 None:intergenic
ATTTCTTAGTTTATGGGCTA+AGG 0.469399 8.4:+16407621 MS.gene032970:CDS
TGTCTTTGATTTAACGGAAA+GGG 0.470268 8.4:+16407525 MS.gene032970:CDS
TAATGAGGCTATTCATTGGT+TGG 0.476284 8.4:+16407462 MS.gene032970:CDS
AGTTGATGGTCAAACTCATC+TGG 0.476777 8.4:-16407568 None:intergenic
TACCTCTGGAATCCATCTAC+TGG 0.477589 8.4:+16407184 MS.gene032970:CDS
TTAGGCTGCTCATCCTCAAT+GGG 0.484131 8.4:-16407424 None:intergenic
GTTATCCAAACAAATACCTC+TGG 0.486229 8.4:+16407170 MS.gene032970:CDS
GAGGATGAGCAGCCTAAGCC+GGG 0.489365 8.4:+16407430 MS.gene032970:CDS
TGAGGATGAGCAGCCTAAGC+CGG 0.491054 8.4:+16407429 MS.gene032970:CDS
AAGTGGTGATATTATTGAAA+CGG 0.495211 8.4:+16407774 MS.gene032970:CDS
CATGCATGCTTCTTCCTCCA+TGG 0.499331 8.4:-16406828 None:intergenic
GGGATCCATGTGAATCGTTA+CGG 0.503698 8.4:-16407858 None:intergenic
ACTTGACTATTGTGGTTTGT+GGG 0.504506 8.4:+16407588 MS.gene032970:CDS
CTGGAACCAAAAGGAGAGAA+AGG 0.506844 8.4:-16407223 None:intergenic
CTGCTTTCACTTCCTTGTGA+CGG 0.517412 8.4:+16407904 MS.gene032970:CDS
CCGTTATAGCAATCCCATTG+AGG 0.526015 8.4:+16407411 MS.gene032970:CDS
AACAGATAATCATCCGTTGA+CGG 0.531319 8.4:-16407283 None:intergenic
GCCGGGGTTGCTATTTAATG+AGG 0.531997 8.4:+16407447 MS.gene032970:CDS
GTTGATATGAATAAAACTCT+AGG 0.534411 8.4:-16406995 None:intergenic
GCATATAAACTGGAACCAAA+AGG 0.540603 8.4:-16407232 None:intergenic
GACCATCAACTTGACTATTG+TGG 0.546126 8.4:+16407580 MS.gene032970:CDS
CATGGAGGAAGAAGCATGCA+TGG 0.555067 8.4:+16406829 None:intergenic
TTGTCTTTGATTTAACGGAA+AGG 0.568763 8.4:+16407524 MS.gene032970:CDS
TGAGTCTTAGTCCAAGATGA+AGG 0.569111 8.4:-16407694 None:intergenic
GTCAACGGATGATTATCTGT+TGG 0.589875 8.4:+16407285 MS.gene032970:CDS
GAAATTAAAGGCTCATGCAG+AGG 0.590051 8.4:+16407130 MS.gene032970:CDS
GTGGAAAGAAATTGAGATCG+AGG 0.598854 8.4:+16407378 MS.gene032970:CDS
TGGAAAGAAATTGAGATCGA+GGG 0.601685 8.4:+16407379 MS.gene032970:CDS
GCCTCATTAAATAGCAACCC+CGG 0.605181 8.4:-16407448 None:intergenic
AACGGATGGTGATACTGGAT+TGG 0.615798 8.4:+16407792 MS.gene032970:CDS
AATGGAGAAAAGTAATCTGT+CGG 0.624209 8.4:-16407739 None:intergenic
TCCATGTGAATCGTTACGGA+AGG 0.624637 8.4:-16407854 None:intergenic
AAACGTATAAGAGACTTCAC+CGG 0.625176 8.4:-16406893 None:intergenic
CTCGGTATATATAGCCACAT+GGG 0.627450 8.4:-16407878 None:intergenic
AGGAAGTGAAAGCAGAGACT+CGG 0.631955 8.4:-16407896 None:intergenic
GGTGATATTATTGAAACGGA+TGG 0.636455 8.4:+16407778 MS.gene032970:CDS
TAAGCTTGTTAACCGTCACA+AGG 0.637901 8.4:-16407916 None:intergenic
ACTCGGTATATATAGCCACA+TGG 0.649360 8.4:-16407879 None:intergenic
ATTTGAATCATCAACTCATG+AGG 0.658303 8.4:-16406857 None:intergenic
TCTCGTTGAGAGATAATACG+TGG 0.669859 8.4:+16407359 MS.gene032970:CDS
TCCTTCCGTAACGATTCACA+TGG 0.681722 8.4:+16407853 MS.gene032970:CDS
CGATTCACATGGATCCCATG+TGG 0.708556 8.4:+16407864 MS.gene032970:CDS
ATCCAGTAGATGGATTCCAG+AGG 0.715335 8.4:-16407186 None:intergenic
AGGATGAGCAGCCTAAGCCG+GGG 0.728363 8.4:+16407431 MS.gene032970:CDS
TTGGTGAAGTCTGATGACAA+AGG 0.797487 8.4:+16407811 MS.gene032970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTGATACAATTGAAATA+TGG + chr8.4:16407650-16407669 MS.gene032970:CDS 15.0%
!! TATCTAAATCTTGAAATTAA+AGG + chr8.4:16407118-16407137 MS.gene032970:CDS 15.0%
!! TATTGATACAATTGAAATAT+GGG + chr8.4:16407651-16407670 MS.gene032970:CDS 15.0%
!! AAAATGTGAATTAGCAAAAT+TGG - chr8.4:16406960-16406979 None:intergenic 20.0%
!!! TATTGTTGTCTTTGATTTAA+CGG + chr8.4:16407519-16407538 MS.gene032970:CDS 20.0%
!!! TTATATGCAGAATATTTCTA+TGG + chr8.4:16407247-16407266 MS.gene032970:CDS 20.0%
! AAGTGGTGATATTATTGAAA+CGG + chr8.4:16407774-16407793 MS.gene032970:CDS 25.0%
! GAAATATTCTGCATATAAAC+TGG - chr8.4:16407245-16407264 None:intergenic 25.0%
! GTTGATATGAATAAAACTCT+AGG - chr8.4:16406998-16407017 None:intergenic 25.0%
! TACTAATATTTCATCGCAAT+TGG + chr8.4:16407330-16407349 MS.gene032970:CDS 25.0%
! TATTTAATGAGGCTATTCAT+TGG + chr8.4:16407458-16407477 MS.gene032970:CDS 25.0%
! TCAAGATTTAGATAAGATTC+AGG - chr8.4:16407112-16407131 None:intergenic 25.0%
! TCATGATTCACGTTTATTAA+GGG + chr8.4:16407492-16407511 MS.gene032970:CDS 25.0%
! TGGAGAATTTCTTAGTTTAT+GGG + chr8.4:16407615-16407634 MS.gene032970:CDS 25.0%
! TTGGAGAATTTCTTAGTTTA+TGG + chr8.4:16407614-16407633 MS.gene032970:CDS 25.0%
!!! CAGAATATTTCTATGGTTTT+GGG + chr8.4:16407254-16407273 MS.gene032970:CDS 25.0%
AATACAAAATGCCTTCATCT+TGG + chr8.4:16407683-16407702 MS.gene032970:CDS 30.0%
AATGGAGAAAAGTAATCTGT+CGG - chr8.4:16407742-16407761 None:intergenic 30.0%
ATTTGAATCATCAACTCATG+AGG - chr8.4:16406860-16406879 None:intergenic 30.0%
GTCATGATTCACGTTTATTA+AGG + chr8.4:16407491-16407510 MS.gene032970:CDS 30.0%
TGATGATTCAAATCCTTCTA+AGG + chr8.4:16406867-16406886 MS.gene032970:CDS 30.0%
TGCGATGAAATATTAGTAAC+CGG - chr8.4:16407328-16407347 None:intergenic 30.0%
! ATTTCTTAGTTTATGGGCTA+AGG + chr8.4:16407621-16407640 MS.gene032970:CDS 30.0%
! TGTCTTTGATTTAACGGAAA+GGG + chr8.4:16407525-16407544 MS.gene032970:CDS 30.0%
! TTGTCTTTGATTTAACGGAA+AGG + chr8.4:16407524-16407543 MS.gene032970:CDS 30.0%
!! GCAGAATATTTCTATGGTTT+TGG + chr8.4:16407253-16407272 MS.gene032970:CDS 30.0%
AAACGTATAAGAGACTTCAC+CGG - chr8.4:16406896-16406915 None:intergenic 35.0%
AACAGATAATCATCCGTTGA+CGG - chr8.4:16407286-16407305 None:intergenic 35.0%
AACTTGACTATTGTGGTTTG+TGG + chr8.4:16407587-16407606 MS.gene032970:CDS 35.0%
CCATTGTGTTGTACAAAAAG+TGG + chr8.4:16407757-16407776 MS.gene032970:CDS 35.0%
GCATATAAACTGGAACCAAA+AGG - chr8.4:16407235-16407254 None:intergenic 35.0%
GGTGATATTATTGAAACGGA+TGG + chr8.4:16407778-16407797 MS.gene032970:CDS 35.0%
GTTATCCAAACAAATACCTC+TGG + chr8.4:16407170-16407189 MS.gene032970:CDS 35.0%
TAATGAGGCTATTCATTGGT+TGG + chr8.4:16407462-16407481 MS.gene032970:CDS 35.0%
TCAAATGCGTTTCTAAGTCT+TGG + chr8.4:16406915-16406934 MS.gene032970:CDS 35.0%
TGGAAAGAAATTGAGATCGA+GGG + chr8.4:16407379-16407398 MS.gene032970:CDS 35.0%
TGTTTGTGAAATCCAGTAGA+TGG - chr8.4:16407199-16407218 None:intergenic 35.0%
! ACTTGACTATTGTGGTTTGT+GGG + chr8.4:16407588-16407607 MS.gene032970:CDS 35.0%
! CAAATACCTTTCTCTCCTTT+TGG + chr8.4:16407217-16407236 MS.gene032970:CDS 35.0%
! GGAAAGGGAACTTTTTGATA+TGG + chr8.4:16407540-16407559 MS.gene032970:CDS 35.0%
! TATTGTGGTTTGTGGGTATT+TGG + chr8.4:16407595-16407614 MS.gene032970:CDS 35.0%
!! AACCACAATAGTCAAGTTGA+TGG - chr8.4:16407585-16407604 None:intergenic 35.0%
!! TCAAATCCTTCTAAGGTTAC+CGG + chr8.4:16406874-16406893 MS.gene032970:CDS 35.0%
!!! CCACTTTTTGTACAACACAA+TGG - chr8.4:16407760-16407779 None:intergenic 35.0%
ACTCGGTATATATAGCCACA+TGG - chr8.4:16407882-16407901 None:intergenic 40.0%
ATTGAAACGGATGGTGATAC+TGG + chr8.4:16407787-16407806 MS.gene032970:CDS 40.0%
CCTCAATGGGATTGCTATAA+CGG - chr8.4:16407414-16407433 None:intergenic 40.0%
CTCGGTATATATAGCCACAT+GGG - chr8.4:16407881-16407900 None:intergenic 40.0%
GAAATTAAAGGCTCATGCAG+AGG + chr8.4:16407130-16407149 MS.gene032970:CDS 40.0%
GACCATCAACTTGACTATTG+TGG + chr8.4:16407580-16407599 MS.gene032970:CDS 40.0%
GGTTTCAATGCTCATTGATC+CGG + chr8.4:16407306-16407325 MS.gene032970:CDS 40.0%
GTCAACGGATGATTATCTGT+TGG + chr8.4:16407285-16407304 MS.gene032970:CDS 40.0%
GTGGAAAGAAATTGAGATCG+AGG + chr8.4:16407378-16407397 MS.gene032970:CDS 40.0%
TCTCGTTGAGAGATAATACG+TGG + chr8.4:16407359-16407378 MS.gene032970:CDS 40.0%
TGAGTCTTAGTCCAAGATGA+AGG - chr8.4:16407697-16407716 None:intergenic 40.0%
TTGGTGAAGTCTGATGACAA+AGG + chr8.4:16407811-16407830 MS.gene032970:CDS 40.0%
!! AGTTGATGGTCAAACTCATC+TGG - chr8.4:16407571-16407590 None:intergenic 40.0%
!! GGATTCCAGAGGTATTTGTT+TGG - chr8.4:16407178-16407197 None:intergenic 40.0%
!!! TTTTGGGTTTGATCCGTCAA+CGG + chr8.4:16407270-16407289 MS.gene032970:CDS 40.0%
AACGGATGGTGATACTGGAT+TGG + chr8.4:16407792-16407811 MS.gene032970:CDS 45.0%
ACTTCACCGGTAACCTTAGA+AGG - chr8.4:16406883-16406902 None:intergenic 45.0%
AGGAAGTGAAAGCAGAGACT+CGG - chr8.4:16407899-16407918 None:intergenic 45.0%
CCGTTATAGCAATCCCATTG+AGG + chr8.4:16407411-16407430 MS.gene032970:CDS 45.0%
CTGCTTTCACTTCCTTGTGA+CGG + chr8.4:16407904-16407923 MS.gene032970:CDS 45.0%
CTGGAACCAAAAGGAGAGAA+AGG - chr8.4:16407226-16407245 None:intergenic 45.0%
GCCTCATTAAATAGCAACCC+CGG - chr8.4:16407451-16407470 None:intergenic 45.0%
GGGATCCATGTGAATCGTTA+CGG - chr8.4:16407861-16407880 None:intergenic 45.0%
TCCATGTGAATCGTTACGGA+AGG - chr8.4:16407857-16407876 None:intergenic 45.0%
TCCTTCCGTAACGATTCACA+TGG + chr8.4:16407853-16407872 MS.gene032970:CDS 45.0%
TTAAATAGCAACCCCGGCTT+AGG - chr8.4:16407445-16407464 None:intergenic 45.0%
TTAGGCTGCTCATCCTCAAT+GGG - chr8.4:16407427-16407446 None:intergenic 45.0%
! ATCCAGTAGATGGATTCCAG+AGG - chr8.4:16407189-16407208 None:intergenic 45.0%
!! TACCTCTGGAATCCATCTAC+TGG + chr8.4:16407184-16407203 MS.gene032970:CDS 45.0%
CGATTCACATGGATCCCATG+TGG + chr8.4:16407864-16407883 MS.gene032970:CDS 50.0%
CTTAGGCTGCTCATCCTCAA+TGG - chr8.4:16407428-16407447 None:intergenic 50.0%
!! GCCGGGGTTGCTATTTAATG+AGG + chr8.4:16407447-16407466 MS.gene032970:CDS 50.0%
TGAGGATGAGCAGCCTAAGC+CGG + chr8.4:16407429-16407448 MS.gene032970:CDS 55.0%
AGGATGAGCAGCCTAAGCCG+GGG + chr8.4:16407431-16407450 MS.gene032970:CDS 60.0%
GAGGATGAGCAGCCTAAGCC+GGG + chr8.4:16407430-16407449 MS.gene032970:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 16406830 16407930 16406830 ID=MS.gene032970
chr8.4 mRNA 16406830 16407930 16406830 ID=MS.gene032970.t1;Parent=MS.gene032970
chr8.4 exon 16406830 16407930 16406830 ID=MS.gene032970.t1.exon1;Parent=MS.gene032970.t1
chr8.4 CDS 16406830 16407930 16406830 ID=cds.MS.gene032970.t1;Parent=MS.gene032970.t1
Gene Sequence

>MS.gene032970

ATGGAGGAAGAAGCATGCATGGATCTACCTCATGAGTTGATGATTCAAATCCTTCTAAGGTTACCGGTGAAGTCTCTTATACGTTTCAAATGCGTTTCTAAGTCTTGGTTTTCTCTTATCTCTGATACCAATTTTGCTAATTCACATTTTCAAATTACACACACTCCTAGAGTTTTATTCATATCAACATCAACTTGTGAAACTCGATCTATAGATTTTGAATCATCGCTTAACGACGATGATTCTGTTTCTGCTTCACTCAATCTTGATTTTCTGCTTCCTGAATCTTATCTAAATCTTGAAATTAAAGGCTCATGCAGAGGCTTCATATTTTTGCACTGTTATCCAAACAAATACCTCTGGAATCCATCTACTGGATTTCACAAACAAATACCTTTCTCTCCTTTTGGTTCCAGTTTATATGCAGAATATTTCTATGGTTTTGGGTTTGATCCGTCAACGGATGATTATCTGTTGGTTTCAATGCTCATTGATCCGGTTACTAATATTTCATCGCAATTGGAGTTTTTCTCGTTGAGAGATAATACGTGGAAAGAAATTGAGATCGAGGGTAGTCATTTCCGTTATAGCAATCCCATTGAGGATGAGCAGCCTAAGCCGGGGTTGCTATTTAATGAGGCTATTCATTGGTTGGCTTATCGTCATGATTCACGTTTATTAAGGGATGTTATTGTTGTCTTTGATTTAACGGAAAGGGAACTTTTTGATATGGATTTGCCAGATGAGTTTGACCATCAACTTGACTATTGTGGTTTGTGGGTATTTGGAGAATTTCTTAGTTTATGGGCTAAGGATTGTTATATTGATACAATTGAAATATGGGTGATGAAAGAATACAAAATGCCTTCATCTTGGACTAAGACTCATGTTCTGTCTTTTGATAGTATGCCGACAGATTACTTTTCTCCATTGTGTTGTACAAAAAGTGGTGATATTATTGAAACGGATGGTGATACTGGATTGGTGAAGTCTGATGACAAAGGACAACTGCTTGAGCATCTCTCCTTCCGTAACGATTCACATGGATCCCATGTGGCTATATATACCGAGTCTCTGCTTTCACTTCCTTGTGACGGTTAA

Protein sequence

>MS.gene032970.t1

MEEEACMDLPHELMIQILLRLPVKSLIRFKCVSKSWFSLISDTNFANSHFQITHTPRVLFISTSTCETRSIDFESSLNDDDSVSASLNLDFLLPESYLNLEIKGSCRGFIFLHCYPNKYLWNPSTGFHKQIPFSPFGSSLYAEYFYGFGFDPSTDDYLLVSMLIDPVTNISSQLEFFSLRDNTWKEIEIEGSHFRYSNPIEDEQPKPGLLFNEAIHWLAYRHDSRLLRDVIVVFDLTERELFDMDLPDEFDHQLDYCGLWVFGEFLSLWAKDCYIDTIEIWVMKEYKMPSSWTKTHVLSFDSMPTDYFSPLCCTKSGDIIETDGDTGLVKSDDKGQLLEHLSFRNDSHGSHVAIYTESLLSLPCDG