AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene58320


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58320.t1 MTR_8g433040 76.294 367 75 2 1 366 9 364 0.0 554
MS.gene58320.t1 MTR_8g032380 76.294 367 75 2 1 366 9 364 0.0 554
MS.gene58320.t1 MTR_8g032390 72.727 363 74 4 1 361 31 370 5.09e-179 502
MS.gene58320.t1 MTR_8g433030 62.534 363 78 9 1 361 31 337 6.38e-139 399
MS.gene58320.t1 MTR_3g103020 57.219 374 136 11 6 366 16 378 1.13e-128 374
MS.gene58320.t1 MTR_4g122850 57.025 363 141 10 21 372 12 370 1.00e-124 364
MS.gene58320.t1 MTR_4g094365 55.256 371 148 8 5 366 3 364 3.83e-122 357
MS.gene58320.t1 MTR_4g021785 55.191 366 140 11 8 366 7 355 3.90e-118 347
MS.gene58320.t1 MTR_4g023090 53.728 389 141 14 5 366 10 386 1.21e-116 344
MS.gene58320.t1 MTR_4g023080 53.951 367 142 11 7 365 6 353 2.44e-116 342
MS.gene58320.t1 MTR_3g034180 53.947 380 143 13 8 366 121 489 2.51e-116 347
MS.gene58320.t1 MTR_6g060650 55.467 375 140 12 9 365 7 372 3.31e-115 340
MS.gene58320.t1 MTR_4g109270 53.723 376 146 14 5 366 3 364 5.72e-114 336
MS.gene58320.t1 MTR_4g023070 51.451 379 149 11 10 365 3 369 1.77e-111 330
MS.gene58320.t1 MTR_4g109280 54.178 371 147 14 5 366 3 359 5.97e-111 328
MS.gene58320.t1 MTR_3g034160 54.090 379 142 13 8 365 7 374 2.28e-107 320
MS.gene58320.t1 MTR_3g034130 53.134 367 141 12 8 353 7 363 5.34e-107 319
MS.gene58320.t1 MTR_4g023130 50.138 363 121 10 7 365 6 312 1.01e-104 311
MS.gene58320.t1 MTR_4g023380 51.538 390 132 13 9 366 15 379 2.77e-104 312
MS.gene58320.t1 MTR_4g117850 52.162 370 147 13 9 363 22 376 1.19e-103 310
MS.gene58320.t1 MTR_4g023120 48.947 380 159 11 10 366 3 370 1.43e-103 310
MS.gene58320.t1 MTR_5g070130 50.769 390 165 14 1 371 1 382 2.18e-103 310
MS.gene58320.t1 MTR_5g097210 49.206 378 170 11 8 375 7 372 2.46e-102 307
MS.gene58320.t1 MTR_4g117720 50.674 371 130 11 8 366 49 378 2.67e-101 305
MS.gene58320.t1 MTR_4g116330 50.811 370 159 13 9 366 22 380 5.63e-101 304
MS.gene58320.t1 MTR_4g117780 49.730 370 160 13 10 366 11 367 1.34e-99 300
MS.gene58320.t1 MTR_4g118380 52.925 359 131 12 9 339 7 355 6.37e-99 298
MS.gene58320.t1 MTR_4g117770 50.663 377 157 14 6 366 4 367 7.28e-96 290
MS.gene58320.t1 MTR_4g117810 50.663 377 157 14 6 366 4 367 7.28e-96 290
MS.gene58320.t1 MTR_4g121580 49.307 361 141 10 8 356 9 339 1.73e-95 290
MS.gene58320.t1 MTR_5g070080 47.355 397 167 14 1 366 1 386 6.01e-94 286
MS.gene58320.t1 MTR_4g023190 49.206 378 157 12 1 364 1 357 1.91e-91 279
MS.gene58320.t1 MTR_4g023150 49.077 379 157 13 1 364 1 358 1.45e-89 274
MS.gene58320.t1 MTR_1g055135 46.579 380 179 11 2 366 5 375 8.97e-89 272
MS.gene58320.t1 MTR_4g023440 48.501 367 129 12 9 366 17 332 4.71e-88 269
MS.gene58320.t1 MTR_5g070088 46.231 398 167 15 4 366 1 386 1.42e-87 270
MS.gene58320.t1 MTR_4g023200 48.169 355 150 12 24 364 24 358 2.33e-87 268
MS.gene58320.t1 MTR_8g013010 53.875 271 109 6 5 269 49 309 2.03e-86 264
MS.gene58320.t1 MTR_4g116330 44.324 370 144 13 9 366 22 341 2.69e-76 239
MS.gene58320.t1 MTR_1g055165 41.823 373 153 9 1 365 1 317 1.14e-74 234
MS.gene58320.t1 MTR_4g117750 45.573 384 167 15 8 370 1 363 1.73e-74 239
MS.gene58320.t1 MTR_4g117750 56.881 109 43 3 260 364 373 481 1.81e-26 110
MS.gene58320.t1 MTR_4g117870 46.844 301 113 8 71 366 9 267 1.12e-73 230
MS.gene58320.t1 MTR_1g055195 47.000 300 125 13 86 372 206 484 1.89e-64 213
MS.gene58320.t1 MTR_4g116320 54.378 217 87 6 153 362 43 254 6.05e-62 199
MS.gene58320.t1 MTR_4g116340 50.644 233 89 6 9 235 35 247 1.89e-61 198
MS.gene58320.t1 MTR_7g079400 44.816 299 143 10 80 366 49 337 6.73e-59 194
MS.gene58320.t1 MTR_4g118400 47.547 265 96 12 102 360 67 294 2.26e-58 191
MS.gene58320.t1 MTR_8g040935 51.905 210 92 5 164 366 1 208 8.47e-57 184
MS.gene58320.t1 MTR_7g079370 40.118 339 182 12 39 360 16 350 6.34e-56 187
MS.gene58320.t1 MTR_6g463430 53.333 195 80 6 176 366 15 202 5.19e-54 177
MS.gene58320.t1 MTR_4g118370 45.703 256 98 11 118 363 33 257 6.51e-52 174
MS.gene58320.t1 MTR_2g048580 37.067 375 184 18 7 366 5 342 1.73e-51 175
MS.gene58320.t1 MTR_8g102520 37.027 370 175 15 5 366 3 322 1.07e-47 164
MS.gene58320.t1 MTR_1g055175 48.020 202 84 6 176 365 8 200 2.69e-45 154
MS.gene58320.t1 MTR_1g055250 42.149 242 118 10 146 375 47 278 2.90e-42 150
MS.gene58320.t1 MTR_4g117530 42.000 250 96 9 123 366 47 253 3.92e-42 148
MS.gene58320.t1 MTR_4g117430 51.829 164 65 5 106 269 3 152 5.21e-42 144
MS.gene58320.t1 MTR_7g117720 47.317 205 84 7 5 203 4 190 6.20e-42 148
MS.gene58320.t1 MTR_7g117720 52.273 88 32 5 283 361 186 272 3.54e-11 63.5
MS.gene58320.t1 MTR_7g079420 35.669 314 148 13 72 366 866 1144 9.43e-36 139
MS.gene58320.t1 MTR_4g114700 38.697 261 100 9 106 357 9 218 1.21e-34 128
MS.gene58320.t1 MTR_1g097490 31.667 360 217 14 10 358 49 390 1.95e-31 123
MS.gene58320.t1 MTR_4g107820 31.731 312 172 10 7 301 33 320 1.05e-30 120
MS.gene58320.t1 MTR_4g107780 31.731 312 172 10 7 301 33 320 1.05e-30 120
MS.gene58320.t1 MTR_4g107820 31.731 312 172 10 7 301 33 320 1.28e-30 121
MS.gene58320.t1 MTR_4g107780 31.731 312 172 10 7 301 33 320 1.41e-30 121
MS.gene58320.t1 MTR_8g101580 29.508 366 225 17 10 358 45 394 1.70e-30 120
MS.gene58320.t1 MTR_1g097560 29.810 369 208 17 10 358 36 373 2.30e-30 119
MS.gene58320.t1 MTR_4g109290 42.767 159 53 4 9 162 8 133 8.43e-30 113
MS.gene58320.t1 MTR_8g098830 45.833 168 80 8 177 339 35 196 1.15e-29 114
MS.gene58320.t1 MTR_3g007360 30.874 366 217 14 13 359 55 403 1.76e-29 117
MS.gene58320.t1 MTR_2g021150 28.696 345 200 14 3 319 2 328 5.15e-29 116
MS.gene58320.t1 MTR_4g118360 51.562 128 52 5 245 365 1 125 1.81e-28 108
MS.gene58320.t1 MTR_3g007410 30.270 370 214 16 13 359 55 403 3.63e-28 114
MS.gene58320.t1 MTR_4g055060 33.770 305 165 12 10 294 30 317 1.14e-27 112
MS.gene58320.t1 MTR_4g133170 27.439 328 202 13 10 319 4 313 1.92e-27 112
MS.gene58320.t1 MTR_3g013740 32.177 317 171 14 10 299 44 343 2.79e-27 112
MS.gene58320.t1 MTR_4g108820 32.566 304 157 13 2 301 32 291 2.88e-27 110
MS.gene58320.t1 MTR_1g094210 27.937 383 201 20 10 358 57 398 6.11e-27 110
MS.gene58320.t1 MTR_5g023000 60.204 98 35 3 273 366 2 99 8.88e-27 102
MS.gene58320.t1 MTR_5g022420 28.571 385 216 19 5 358 21 377 8.95e-27 110
MS.gene58320.t1 MTR_3g007330 32.237 304 177 11 10 303 48 332 1.23e-26 109
MS.gene58320.t1 MTR_3g009310 33.333 306 166 12 10 298 42 326 1.86e-26 109
MS.gene58320.t1 MTR_4g122860 39.175 194 79 8 182 366 157 320 2.50e-26 108
MS.gene58320.t1 MTR_4g122860 49.351 77 39 0 9 85 69 145 2.33e-13 70.9
MS.gene58320.t1 MTR_1g094210 28.255 361 185 19 10 337 57 376 5.96e-26 108
MS.gene58320.t1 MTR_8g467140 31.353 303 183 13 8 299 30 318 1.05e-25 106
MS.gene58320.t1 MTR_3g014540 31.310 313 175 11 10 303 29 320 2.20e-25 106
MS.gene58320.t1 MTR_5g069120 38.983 177 97 4 20 185 1 177 4.60e-25 100
MS.gene58320.t1 MTR_0044s0300 30.351 313 173 14 10 303 38 324 5.08e-25 105
MS.gene58320.t1 MTR_4g129190 33.929 224 125 11 10 221 6 218 6.94e-25 105
MS.gene58320.t1 MTR_3g083640 28.760 379 209 19 10 358 55 402 8.78e-25 104
MS.gene58320.t1 MTR_5g057710 30.573 314 166 16 10 299 46 331 9.50e-25 104
MS.gene58320.t1 MTR_2g426020 27.835 388 234 17 10 362 6 382 1.72e-24 103
MS.gene58320.t1 MTR_2g046900 28.753 393 212 18 4 358 22 384 2.32e-24 103
MS.gene58320.t1 MTR_5g057790 31.429 315 162 16 10 299 46 331 2.33e-24 103
MS.gene58320.t1 MTR_2g046920 30.159 315 181 12 4 301 18 310 2.57e-24 103
MS.gene58320.t1 MTR_4g024890 26.410 390 233 14 9 358 9 384 3.86e-24 102
MS.gene58320.t1 MTR_3g036430 28.099 363 207 16 10 358 20 342 4.29e-24 102
MS.gene58320.t1 MTR_2g055970 31.210 314 183 16 7 305 208 503 4.33e-24 103
MS.gene58320.t1 MTR_5g057690 30.872 298 176 11 10 299 46 321 6.16e-24 102
MS.gene58320.t1 MTR_5g007610 30.671 313 186 14 10 303 41 341 1.29e-23 101
MS.gene58320.t1 MTR_6g034720 47.154 123 58 4 129 248 53 171 1.89e-23 97.4
MS.gene58320.t1 MTR_2g021155 32.551 341 195 17 10 331 33 357 2.53e-23 102
MS.gene58320.t1 MTR_3g010870 27.128 376 219 16 10 358 37 384 3.02e-23 100
MS.gene58320.t1 MTR_3g436150 30.820 305 182 12 10 294 32 327 4.62e-23 99.8
MS.gene58320.t1 MTR_1g055070 30.597 268 146 11 10 249 49 304 4.75e-23 99.8
MS.gene58320.t1 MTR_3g014570 30.769 312 168 12 10 298 29 315 6.74e-23 99.4
MS.gene58320.t1 MTR_3g010390 29.762 336 186 16 10 311 33 352 8.67e-23 99.0
MS.gene58320.t1 MTR_1g050542 27.957 372 220 14 10 358 58 404 1.06e-22 99.0
MS.gene58320.t1 MTR_6g065980 30.976 297 163 15 10 294 16 282 1.24e-22 98.2
MS.gene58320.t1 MTR_1g068835 28.620 297 187 11 10 294 4 287 1.85e-22 97.8
MS.gene58320.t1 MTR_3g013770 30.351 313 182 10 10 303 33 328 1.97e-22 97.8
MS.gene58320.t1 MTR_1g097330 29.412 306 195 10 3 301 9 300 2.09e-22 98.2
MS.gene58320.t1 MTR_4g061340 29.870 308 179 11 10 298 26 315 2.44e-22 97.4
MS.gene58320.t1 MTR_3g036290 29.508 366 210 16 10 358 22 356 2.51e-22 97.1
MS.gene58320.t1 MTR_0128s0020 31.861 317 169 13 10 296 18 317 2.85e-22 97.4
MS.gene58320.t1 MTR_4g030830 27.494 411 210 18 10 358 9 393 2.93e-22 97.4
MS.gene58320.t1 MTR_6g021880 30.976 297 177 11 21 299 31 317 3.00e-22 97.4
MS.gene58320.t1 MTR_7g079450 43.151 146 66 6 229 366 1 137 3.01e-22 91.7
MS.gene58320.t1 MTR_0667s0010 26.705 352 217 13 10 333 6 344 3.67e-22 97.4
MS.gene58320.t1 MTR_5g011200 29.260 311 178 14 10 299 17 306 5.99e-22 96.3
MS.gene58320.t1 MTR_0760s0010 29.315 365 210 16 15 358 52 389 6.78e-22 96.3
MS.gene58320.t1 MTR_2g021770 27.833 406 223 16 12 361 14 405 7.26e-22 96.7
MS.gene58320.t1 MTR_3g007270 28.875 329 182 16 10 307 47 354 9.82e-22 96.3
MS.gene58320.t1 MTR_3g006670 29.801 302 185 9 10 298 49 336 9.82e-22 96.3
MS.gene58320.t1 MTR_2g029990 27.248 367 232 12 11 358 52 402 1.08e-21 95.9
MS.gene58320.t1 MTR_7g013590 31.290 310 167 13 13 299 39 325 1.09e-21 95.9
MS.gene58320.t1 MTR_1g068875 27.181 298 189 12 10 294 4 286 1.16e-21 95.5
MS.gene58320.t1 MTR_2g028130 25.436 401 245 15 10 365 5 396 1.19e-21 95.9
MS.gene58320.t1 MTR_7g070830 28.402 338 192 13 10 302 21 353 1.20e-21 95.9
MS.gene58320.t1 MTR_2g031720 27.820 399 237 19 10 375 6 386 1.43e-21 95.5
MS.gene58320.t1 MTR_2g047832 28.916 332 183 14 4 301 23 335 1.67e-21 95.5
MS.gene58320.t1 MTR_3g006500 27.461 386 210 18 10 358 17 369 1.90e-21 94.7
MS.gene58320.t1 MTR_4g031770 29.126 309 186 14 10 303 4 294 2.00e-21 94.7
MS.gene58320.t1 MTR_3g007430 28.758 306 175 10 13 298 46 328 2.42e-21 94.7
MS.gene58320.t1 MTR_1g054725 27.273 385 217 17 9 358 19 375 2.63e-21 94.7
MS.gene58320.t1 MTR_3g023930 27.568 370 211 15 10 358 34 367 3.36e-21 94.0
MS.gene58320.t1 MTR_3g072470 29.855 345 160 13 7 298 16 331 3.73e-21 94.7
MS.gene58320.t1 MTR_7g407070 30.931 333 188 17 10 311 32 353 4.26e-21 94.4
MS.gene58320.t1 MTR_6g016285 25.917 409 235 15 8 358 19 417 5.34e-21 94.4
MS.gene58320.t1 MTR_3g036335 26.374 364 212 15 10 343 41 378 5.44e-21 94.0
MS.gene58320.t1 MTR_4g013180 28.191 376 216 17 5 338 6 369 6.11e-21 94.4
MS.gene58320.t1 MTR_3g011060 31.034 319 170 14 10 299 28 325 6.87e-21 93.6
MS.gene58320.t1 MTR_7g056760 28.788 330 199 11 2 302 15 337 7.51e-21 93.6
MS.gene58320.t1 MTR_2g078900 27.793 367 204 15 10 360 33 354 8.48e-21 92.8
MS.gene58320.t1 MTR_3g006570 26.031 388 216 16 10 358 21 376 8.51e-21 93.2
MS.gene58320.t1 MTR_3g010520 27.635 351 200 13 10 352 25 329 1.58e-20 92.0
MS.gene58320.t1 MTR_2g043400 27.612 402 216 17 8 354 21 402 1.69e-20 92.8
MS.gene58320.t1 MTR_5g057020 30.565 301 168 14 10 299 46 316 1.86e-20 91.7
MS.gene58320.t1 MTR_7g070880 27.515 338 195 13 10 302 21 353 2.17e-20 92.4
MS.gene58320.t1 MTR_3g030350 29.252 294 183 11 10 294 35 312 2.40e-20 92.0
MS.gene58320.t1 MTR_7g056390 28.358 335 179 12 7 298 15 331 2.55e-20 92.0
MS.gene58320.t1 MTR_2g028160 25.750 400 234 19 10 360 5 390 2.84e-20 92.0
MS.gene58320.t1 MTR_0128s0070 29.101 378 217 15 10 354 22 381 2.88e-20 91.7
MS.gene58320.t1 MTR_2g461450 27.844 334 196 13 10 319 18 330 3.67e-20 90.9
MS.gene58320.t1 MTR_0115s0020 28.137 263 161 8 10 248 10 268 3.72e-20 91.7
MS.gene58320.t1 MTR_4g019990 26.980 404 219 17 9 357 5 387 3.77e-20 91.3
MS.gene58320.t1 MTR_3g024110 29.316 307 179 11 10 303 101 382 3.92e-20 91.7
MS.gene58320.t1 MTR_2g043410 29.042 334 179 14 8 302 20 334 4.89e-20 91.3
MS.gene58320.t1 MTR_6g027910 28.125 384 217 19 13 358 12 374 4.97e-20 90.9
MS.gene58320.t1 MTR_1g068860 27.517 298 191 11 10 294 4 289 5.31e-20 90.9
MS.gene58320.t1 MTR_8g073550 35.025 197 104 9 9 191 29 215 6.60e-20 88.2
MS.gene58320.t1 MTR_2g426070 25.515 388 248 13 11 365 7 386 6.75e-20 90.9
MS.gene58320.t1 MTR_7g066030 28.191 376 206 16 6 333 17 376 6.97e-20 90.9
MS.gene58320.t1 MTR_5g056020 26.794 418 237 19 3 358 10 420 7.13e-20 91.3
MS.gene58320.t1 MTR_3g011100 29.582 311 177 11 10 298 235 525 8.72e-20 91.3
MS.gene58320.t1 MTR_2g021190 28.302 371 225 15 10 358 21 372 9.43e-20 90.1
MS.gene58320.t1 MTR_4g117550 25.897 390 218 15 9 361 16 371 1.05e-19 89.7
MS.gene58320.t1 MTR_2g024100 28.065 310 184 13 12 294 9 306 1.06e-19 90.1
MS.gene58320.t1 MTR_4g023430 66.667 66 18 1 1 62 32 97 1.08e-19 87.0
MS.gene58320.t1 MTR_4g023430 46.667 105 47 4 270 366 119 222 1.13e-16 78.6
MS.gene58320.t1 MTR_5g097350 27.154 383 221 18 19 364 25 386 1.19e-19 89.7
MS.gene58320.t1 MTR_3g058480 31.179 263 140 10 10 249 39 283 1.20e-19 89.4
MS.gene58320.t1 MTR_5g037680 26.087 391 232 18 9 358 7 381 1.31e-19 90.5
MS.gene58320.t1 MTR_2g025420 25.063 399 237 17 10 358 6 392 1.51e-19 90.1
MS.gene58320.t1 MTR_2g021252 24.932 365 227 13 13 359 50 385 1.59e-19 89.4
MS.gene58320.t1 MTR_3g010430 27.013 385 217 17 10 358 36 392 1.60e-19 89.7
MS.gene58320.t1 MTR_3g464500 28.492 358 197 13 3 319 20 359 1.90e-19 89.4
MS.gene58320.t1 MTR_2g046830 29.814 322 173 15 4 301 19 311 2.06e-19 89.4
MS.gene58320.t1 MTR_2g031680 26.075 372 234 15 10 360 6 357 2.91e-19 89.0
MS.gene58320.t1 MTR_2g028140 27.077 325 193 14 10 298 5 321 3.02e-19 89.0
MS.gene58320.t1 MTR_0064s0160 30.147 272 156 9 4 248 36 300 3.16e-19 89.0
MS.gene58320.t1 MTR_3g009260 29.139 302 191 10 10 305 41 325 3.40e-19 88.6
MS.gene58320.t1 MTR_3g030330 28.710 310 185 10 10 307 20 305 3.73e-19 88.2
MS.gene58320.t1 MTR_6g007135 25.758 396 215 16 10 358 26 389 3.90e-19 88.6
MS.gene58320.t1 MTR_3g030250 26.316 380 212 16 10 358 37 379 4.52e-19 88.2
MS.gene58320.t1 MTR_2g078850 29.450 309 177 15 13 303 33 318 5.16e-19 87.8
MS.gene58320.t1 MTR_3g464470 26.952 397 230 14 4 358 1 379 5.78e-19 87.8
MS.gene58320.t1 MTR_2g028110 25.393 382 240 16 10 365 4 366 6.65e-19 87.8
MS.gene58320.t1 MTR_0464s0020 29.897 291 149 11 8 255 21 299 6.68e-19 88.2
MS.gene58320.t1 MTR_2g031640 24.869 382 242 16 10 365 6 368 6.88e-19 87.8
MS.gene58320.t1 MTR_5g069760 27.869 366 198 17 8 333 4 343 8.06e-19 87.4
MS.gene58320.t1 MTR_1g115160 30.897 301 177 14 8 299 20 298 9.38e-19 87.0
MS.gene58320.t1 MTR_7g077970 29.217 332 188 14 10 302 7 330 9.97e-19 87.4
MS.gene58320.t1 MTR_7g062060 27.193 342 205 16 9 311 11 347 1.08e-18 87.0
MS.gene58320.t1 MTR_7g070440 27.302 315 195 11 4 296 1 303 1.10e-18 87.0
MS.gene58320.t1 MTR_4g102410 25.693 397 243 17 9 361 60 448 1.23e-18 87.4
MS.gene58320.t1 MTR_7g056290 28.571 336 177 14 7 298 19 335 1.30e-18 87.0
MS.gene58320.t1 MTR_7g060960 30.128 312 154 14 8 298 30 298 1.51e-18 86.7
MS.gene58320.t1 MTR_7g066000 27.673 318 205 13 7 302 22 336 1.63e-18 86.7
MS.gene58320.t1 MTR_4g037465 28.382 377 203 16 10 341 21 375 1.65e-18 86.7
MS.gene58320.t1 MTR_2g426090 25.786 318 197 12 4 294 1 306 1.94e-18 86.7
MS.gene58320.t1 MTR_0242s0060 28.443 334 188 15 8 302 7 328 2.35e-18 86.3
MS.gene58320.t1 MTR_0242s0040 28.443 334 188 15 8 302 7 328 2.35e-18 86.3
MS.gene58320.t1 MTR_7g060940 27.887 355 188 12 8 319 20 349 2.53e-18 86.3
MS.gene58320.t1 MTR_3g083010 25.945 397 241 17 10 360 6 395 2.57e-18 86.3
MS.gene58320.t1 MTR_3g010970 25.798 376 214 16 13 358 51 391 2.64e-18 85.9
MS.gene58320.t1 MTR_3g009240 29.352 293 183 9 10 294 36 312 2.68e-18 85.9
MS.gene58320.t1 MTR_1g088120 27.976 336 193 13 1 298 1 325 3.07e-18 85.9
MS.gene58320.t1 MTR_7g055987 27.937 315 171 15 13 298 23 310 3.29e-18 85.5
MS.gene58320.t1 MTR_8g062660 27.500 320 177 13 10 299 22 316 3.35e-18 86.7
MS.gene58320.t1 MTR_6g090180 25.616 406 244 14 2 359 39 434 3.37e-18 85.9
MS.gene58320.t1 MTR_7g028660 27.607 326 195 11 8 305 9 321 3.69e-18 85.5
MS.gene58320.t1 MTR_6g017280 27.410 332 192 12 3 302 2 316 3.91e-18 85.5
MS.gene58320.t1 MTR_7g091630 27.301 326 204 13 5 302 27 347 4.68e-18 85.5
MS.gene58320.t1 MTR_3g010590 28.852 305 170 13 10 299 39 311 4.71e-18 85.1
MS.gene58320.t1 MTR_3g024040 29.965 287 176 11 17 298 38 304 5.28e-18 85.1
MS.gene58320.t1 MTR_2g425980 26.463 393 234 20 10 362 5 382 6.51e-18 85.1
MS.gene58320.t1 MTR_3g024150 29.568 301 177 14 13 299 38 317 6.99e-18 84.7
MS.gene58320.t1 MTR_7g056503 26.899 316 204 11 9 302 20 330 8.55e-18 84.7
MS.gene58320.t1 MTR_4g030110 25.397 378 228 14 1 343 21 379 1.01e-17 84.3
MS.gene58320.t1 MTR_5g069390 24.378 402 244 16 9 361 25 415 1.02e-17 84.7
MS.gene58320.t1 MTR_5g046300 28.333 300 176 13 10 294 4 279 1.04e-17 84.0
MS.gene58320.t1 MTR_5g046290 28.333 300 176 13 10 294 4 279 1.04e-17 84.0
MS.gene58320.t1 MTR_3g058470 34.804 204 106 7 10 192 37 234 1.11e-17 84.0
MS.gene58320.t1 MTR_0649s0020 28.418 373 205 18 10 338 11 365 1.22e-17 84.0
MS.gene58320.t1 MTR_5g069930 26.625 323 192 13 8 302 4 309 1.25e-17 84.0
MS.gene58320.t1 MTR_7g007300 28.025 314 173 14 10 303 103 383 1.43e-17 84.3
MS.gene58320.t1 MTR_0097s0030 26.136 352 202 13 3 319 7 335 1.71e-17 83.6
MS.gene58320.t1 MTR_2g047240 26.136 352 202 13 3 319 7 335 1.71e-17 83.6
MS.gene58320.t1 MTR_8g099460 26.558 369 222 15 7 350 2 346 1.78e-17 83.6
MS.gene58320.t1 MTR_5g096630 24.938 405 241 16 10 361 18 412 2.12e-17 83.6
MS.gene58320.t1 MTR_7g055977 26.406 409 220 20 4 359 1 381 2.12e-17 83.2
MS.gene58320.t1 MTR_2g426060 28.025 314 186 15 10 294 6 308 2.16e-17 83.6
MS.gene58320.t1 MTR_1g054575 27.300 337 188 16 10 320 52 357 2.38e-17 84.0
MS.gene58320.t1 MTR_2g021800 23.632 402 252 11 9 359 15 412 3.40e-17 82.8
MS.gene58320.t1 MTR_2g104340 25.000 400 235 15 9 361 13 394 3.67e-17 82.8
MS.gene58320.t1 MTR_2g024110 27.609 297 192 12 10 294 4 289 3.73e-17 82.4
MS.gene58320.t1 MTR_5g046260 25.915 355 196 16 10 358 4 297 4.48e-17 81.3
MS.gene58320.t1 MTR_3g030240 26.203 374 215 17 10 358 40 377 4.52e-17 82.4
MS.gene58320.t1 MTR_7g066010 28.522 291 157 10 6 260 17 292 4.59e-17 82.0
MS.gene58320.t1 MTR_3g010920 25.737 373 218 14 10 358 44 381 4.61e-17 82.4
MS.gene58320.t1 MTR_4g030090 26.752 314 189 10 10 294 14 315 4.69e-17 82.4
MS.gene58320.t1 MTR_2g021050 26.575 365 207 16 10 345 5 337 6.68e-17 81.6
MS.gene58320.t1 MTR_3g010620 27.508 309 176 13 8 300 31 307 8.27e-17 81.6
MS.gene58320.t1 MTR_7g055930 26.154 390 213 17 10 331 13 395 9.23e-17 81.6
MS.gene58320.t1 MTR_6g004660 28.803 309 182 13 10 294 16 310 1.00e-16 81.3
MS.gene58320.t1 MTR_7g078860 29.360 344 177 17 3 302 2 323 1.09e-16 81.3
MS.gene58320.t1 MTR_7g078840 28.329 353 182 14 8 302 8 347 1.15e-16 81.3
MS.gene58320.t1 MTR_1g056710 29.183 257 148 10 10 249 34 273 1.22e-16 80.9
MS.gene58320.t1 MTR_6g053240 28.399 331 173 15 10 306 28 328 1.38e-16 80.9
MS.gene58320.t1 MTR_2g047878 27.013 385 219 16 2 358 13 363 1.42e-16 80.5
MS.gene58320.t1 MTR_5g096710 30.031 323 169 17 7 294 20 320 2.60e-16 80.1
MS.gene58320.t1 MTR_2g047892 24.289 387 206 16 2 333 14 368 2.80e-16 80.1
MS.gene58320.t1 MTR_3g030310 28.177 362 200 18 10 337 21 356 2.82e-16 80.1
MS.gene58320.t1 MTR_7g056003 28.322 286 149 11 7 255 12 278 3.38e-16 79.7
MS.gene58320.t1 MTR_0128s0010 27.532 316 191 12 5 294 16 319 3.75e-16 79.7
MS.gene58320.t1 MTR_7g055870 26.667 390 211 17 10 331 13 395 3.93e-16 79.7
MS.gene58320.t1 MTR_7g056260 27.914 326 178 13 8 298 12 315 4.20e-16 78.6
MS.gene58320.t1 MTR_3g437520 28.280 343 177 16 8 298 21 346 4.22e-16 79.7
MS.gene58320.t1 MTR_4g014370 23.775 408 246 16 9 361 10 407 4.40e-16 79.7
MS.gene58320.t1 MTR_7g066100 25.831 391 252 14 6 360 7 395 4.80e-16 79.3
MS.gene58320.t1 MTR_1g055375 27.653 311 189 15 13 303 7 301 5.38e-16 79.0
MS.gene58320.t1 MTR_4g030790 28.618 304 154 12 10 294 19 278 5.89e-16 78.6
MS.gene58320.t1 MTR_7g067680 27.869 305 168 10 10 299 49 316 6.93e-16 79.0
MS.gene58320.t1 MTR_4g070550 25.330 379 234 17 10 356 5 366 7.12e-16 79.0
MS.gene58320.t1 MTR_7g091640 28.182 330 192 14 5 302 30 346 7.41e-16 78.6
MS.gene58320.t1 MTR_8g464770 27.202 386 228 16 9 360 11 377 8.50e-16 78.6
MS.gene58320.t1 MTR_5g097680 24.764 424 234 18 9 361 16 425 9.85e-16 78.6
MS.gene58320.t1 MTR_1g023400 28.267 375 222 21 8 359 1 351 1.03e-15 77.8
MS.gene58320.t1 MTR_2g021950 24.936 393 239 15 9 359 15 393 1.04e-15 78.2
MS.gene58320.t1 MTR_4g080200 25.600 375 226 16 8 359 1 345 1.25e-15 77.8
MS.gene58320.t1 MTR_0129s0070 26.753 385 240 18 9 359 16 392 1.26e-15 78.2
MS.gene58320.t1 MTR_7g078040 27.143 350 181 14 10 302 9 341 1.73e-15 77.8
MS.gene58320.t1 MTR_7g061060 26.911 327 188 13 8 302 11 318 2.93e-15 77.0
MS.gene58320.t1 MTR_4g011660 26.190 294 155 11 7 252 16 295 3.50e-15 77.0
MS.gene58320.t1 MTR_6g086825 25.187 401 245 16 7 361 67 458 5.92e-15 76.3
MS.gene58320.t1 MTR_5g068040 31.461 267 143 12 8 255 14 259 6.41e-15 75.9
MS.gene58320.t1 MTR_3g011650 31.963 219 125 7 13 223 82 284 6.76e-15 74.7
MS.gene58320.t1 MTR_7g057270 26.970 330 191 13 10 302 26 342 7.34e-15 75.9
MS.gene58320.t1 MTR_4g006840 30.667 225 101 8 13 223 2 185 8.96e-15 73.6
MS.gene58320.t1 MTR_3g080370 25.436 401 231 16 24 366 35 425 9.04e-15 75.9
MS.gene58320.t1 MTR_3g023940 25.201 373 232 15 10 358 34 383 1.47e-14 74.7
MS.gene58320.t1 MTR_7g017040 23.980 392 245 13 9 359 15 394 1.56e-14 74.7
MS.gene58320.t1 MTR_1g061330 25.798 376 240 13 10 364 4 361 1.61e-14 74.7
MS.gene58320.t1 MTR_4g030760 25.108 231 153 6 7 227 70 290 1.77e-14 74.7
MS.gene58320.t1 MTR_3g009250 31.628 215 130 6 13 223 44 245 2.01e-14 72.8
MS.gene58320.t1 MTR_7g445750 25.606 289 163 8 7 255 20 296 2.11e-14 73.9
MS.gene58320.t1 MTR_1g007410 24.390 410 231 18 1 355 13 398 2.28e-14 74.3
MS.gene58320.t1 MTR_5g057643 31.034 232 109 13 10 216 46 251 2.43e-14 72.8
MS.gene58320.t1 MTR_5g097820 29.339 242 136 10 9 222 22 256 2.55e-14 72.8
MS.gene58320.t1 MTR_6g055210 25.862 406 238 17 9 358 21 419 2.85e-14 74.3
MS.gene58320.t1 MTR_2g047200 25.459 381 204 19 10 338 20 372 3.01e-14 73.9
MS.gene58320.t1 MTR_6g048140 29.697 330 170 16 10 308 39 337 3.06e-14 73.9
MS.gene58320.t1 MTR_1g058190 26.059 307 178 13 8 299 33 305 3.17e-14 73.6
MS.gene58320.t1 MTR_5g057040 32.386 176 83 8 10 164 46 206 3.21e-14 74.7
MS.gene58320.t1 MTR_3g007300 28.523 298 160 13 10 298 49 302 3.43e-14 73.6
MS.gene58320.t1 MTR_3g011120 29.218 243 123 11 9 219 13 238 3.46e-14 73.6
MS.gene58320.t1 MTR_7g077990 25.625 320 179 10 10 294 17 312 3.48e-14 73.6
MS.gene58320.t1 MTR_3g010870 30.396 227 116 10 10 219 37 238 4.72e-14 72.8
MS.gene58320.t1 MTR_7g066840 24.752 404 236 16 5 361 18 400 4.75e-14 73.2
MS.gene58320.t1 MTR_7g016930 27.468 233 125 9 9 219 15 225 6.34e-14 72.4
MS.gene58320.t1 MTR_5g023570 39.252 107 63 1 5 111 32 136 6.52e-14 68.9
MS.gene58320.t1 MTR_4g033495 24.791 359 207 13 10 322 27 368 7.69e-14 72.8
MS.gene58320.t1 MTR_5g008530 66.667 48 16 0 7 54 15 62 8.06e-14 66.6
MS.gene58320.t1 MTR_4g129160 26.879 346 193 13 4 302 1 333 8.61e-14 72.4
MS.gene58320.t1 MTR_7g061010 28.177 362 198 17 8 331 20 357 1.02e-13 72.4
MS.gene58320.t1 MTR_2g021210 25.071 351 223 16 10 345 84 409 1.02e-13 72.4
MS.gene58320.t1 MTR_5g048160 27.170 265 166 9 10 248 4 267 1.02e-13 72.4
MS.gene58320.t1 MTR_2g022000 22.518 413 264 12 9 371 15 421 1.45e-13 72.0
MS.gene58320.t1 MTR_5g097330 24.235 392 243 14 12 359 18 399 1.87e-13 71.6
MS.gene58320.t1 MTR_7g050480 29.915 234 124 10 7 223 19 229 1.91e-13 71.6
MS.gene58320.t1 MTR_1g115205 28.696 230 127 7 13 225 32 241 2.18e-13 69.7
MS.gene58320.t1 MTR_5g094350 25.632 277 162 12 9 253 12 276 2.59e-13 70.1
MS.gene58320.t1 MTR_1g007450 28.782 271 155 9 10 248 12 276 3.37e-13 70.9
MS.gene58320.t1 MTR_6g017270 28.095 210 122 9 3 191 2 203 3.42e-13 70.5
MS.gene58320.t1 MTR_1g055200 41.414 99 45 4 102 192 5 98 3.68e-13 65.5
MS.gene58320.t1 MTR_7g056200 26.087 322 172 12 8 298 21 307 3.87e-13 70.5
MS.gene58320.t1 MTR_2g078870 29.032 186 108 9 119 302 78 241 3.87e-13 69.7
MS.gene58320.t1 MTR_2g066200 23.750 400 252 17 1 361 1 386 3.93e-13 70.5
MS.gene58320.t1 MTR_8g046310 26.087 391 226 20 9 363 15 378 4.03e-13 70.5
MS.gene58320.t1 MTR_7g056170 27.532 316 157 12 1 255 66 370 4.36e-13 70.5
MS.gene58320.t1 MTR_7g050520 30.603 232 125 10 7 223 19 229 4.63e-13 70.5
MS.gene58320.t1 MTR_7g052150 26.953 256 148 8 8 242 20 257 5.38e-13 70.1
MS.gene58320.t1 MTR_6g092560 24.250 400 240 16 10 360 12 397 5.52e-13 70.5
MS.gene58320.t1 MTR_7g022600 26.877 253 138 8 2 221 15 253 6.77e-13 70.1
MS.gene58320.t1 MTR_7g061090 24.024 333 202 12 8 302 20 339 6.84e-13 69.7
MS.gene58320.t1 MTR_7g056797 26.935 323 192 14 2 292 15 325 8.11e-13 69.7
MS.gene58320.t1 MTR_5g009060 30.211 331 168 19 10 294 25 338 8.39e-13 69.7
MS.gene58320.t1 MTR_1g053510 23.022 417 235 13 6 360 11 403 1.23e-12 68.9
MS.gene58320.t1 MTR_3g058440 30.000 240 134 9 10 229 35 260 1.32e-12 68.2
MS.gene58320.t1 MTR_6g013270 28.797 316 182 14 10 303 29 323 1.45e-12 68.9
MS.gene58320.t1 MTR_5g022090 26.953 256 141 8 10 253 34 255 1.95e-12 68.6
MS.gene58320.t1 MTR_4g013175 26.974 304 162 10 1 255 1 293 2.37e-12 68.2
MS.gene58320.t1 MTR_3g096250 33.939 165 96 6 10 165 47 207 2.56e-12 67.8
MS.gene58320.t1 MTR_0129s0120 23.469 392 244 15 9 359 16 392 3.14e-12 67.8
MS.gene58320.t1 MTR_5g064700 23.867 331 194 15 80 361 45 366 3.65e-12 67.4
MS.gene58320.t1 MTR_5g043160 25.074 339 197 13 13 302 53 383 3.84e-12 67.8
MS.gene58320.t1 MTR_4g024870 26.667 255 149 8 11 237 45 289 4.06e-12 67.4
MS.gene58320.t1 MTR_4g006270 26.531 294 176 11 10 292 4 268 4.10e-12 67.4
MS.gene58320.t1 MTR_8g013005 60.714 56 20 1 312 365 3 58 4.32e-12 61.2
MS.gene58320.t1 MTR_7g078900 26.835 395 215 16 9 342 11 392 5.68e-12 67.0
MS.gene58320.t1 MTR_8g066440 24.251 367 230 14 11 338 24 381 5.88e-12 67.0
MS.gene58320.t1 MTR_1g009110 25.676 370 226 18 2 342 7 356 6.94e-12 66.6
MS.gene58320.t1 MTR_7g077070 25.538 372 219 16 7 329 13 375 8.61e-12 66.6
MS.gene58320.t1 MTR_7g052670 25.000 380 200 16 8 319 19 381 8.64e-12 66.6
MS.gene58320.t1 MTR_0054s0090 24.816 407 234 18 9 361 16 404 9.98e-12 66.2
MS.gene58320.t1 MTR_2g437110 28.016 257 122 12 8 220 20 257 1.01e-11 66.6
MS.gene58320.t1 MTR_6g034830 38.889 108 52 2 6 111 16 111 1.21e-11 61.6
MS.gene58320.t1 MTR_0627s0010 26.431 367 175 19 10 311 38 374 1.47e-11 65.9
MS.gene58320.t1 MTR_1g015740 37.391 115 53 3 10 111 8 116 2.78e-11 64.3
MS.gene58320.t1 MTR_2g010900 27.092 251 154 10 28 253 1 247 2.89e-11 64.7
MS.gene58320.t1 MTR_7g056710 26.154 325 183 13 9 302 17 315 2.94e-11 64.7
MS.gene58320.t1 MTR_7g050490 30.198 202 105 7 7 190 5 188 3.73e-11 62.0
MS.gene58320.t1 MTR_1g071010 26.549 226 143 10 10 221 15 231 3.84e-11 64.3
MS.gene58320.t1 MTR_8g101940 26.991 226 140 7 10 223 2 214 4.20e-11 64.3
MS.gene58320.t1 MTR_7g056373 61.224 49 19 0 7 55 19 67 4.51e-11 60.5
MS.gene58320.t1 MTR_1g055065 28.755 233 132 11 85 299 3 219 5.75e-11 63.2
MS.gene58320.t1 MTR_7g035295 25.882 255 130 8 10 242 16 233 6.27e-11 63.9
MS.gene58320.t1 MTR_2g010950 26.754 228 144 6 10 221 20 240 7.99e-11 63.5
MS.gene58320.t1 MTR_4g055820 26.370 292 154 12 7 254 11 285 8.02e-11 63.2
MS.gene58320.t1 MTR_1g047490 25.185 270 153 12 8 256 20 261 8.15e-11 63.2
MS.gene58320.t1 MTR_3g010440 32.624 141 71 4 10 135 26 157 8.68e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58320.t1 AT3G06240 28.647 377 198 17 6 331 32 388 4.16e-24 103
MS.gene58320.t1 AT3G23880 28.406 345 197 15 10 331 14 331 1.15e-22 98.2
MS.gene58320.t1 AT3G16210 26.748 329 203 13 9 326 4 305 1.63e-19 89.4
MS.gene58320.t1 AT4G19940 26.271 354 210 16 10 331 35 369 1.48e-17 84.0
MS.gene58320.t1 AT4G12560 28.125 320 199 15 10 308 4 313 4.03e-16 79.7
MS.gene58320.t1 AT4G12560 28.125 320 199 15 10 308 4 313 4.03e-16 79.7
MS.gene58320.t1 AT4G12560 28.125 320 199 15 10 308 4 313 4.03e-16 79.7
MS.gene58320.t1 AT1G13200 23.227 409 236 16 10 358 43 433 6.83e-16 79.3
MS.gene58320.t1 AT3G17710 25.649 308 202 12 7 302 3 295 9.21e-16 78.2
MS.gene58320.t1 AT5G49610 26.792 265 155 10 1 250 1 241 7.86e-15 75.5
MS.gene58320.t1 AT3G16590 25.000 324 205 13 10 313 5 310 8.96e-14 72.4
MS.gene58320.t1 AT3G08750 29.880 251 142 13 5 245 4 230 2.23e-13 71.2
MS.gene58320.t1 AT3G10430 27.957 279 158 12 10 273 5 255 3.54e-13 70.5
MS.gene58320.t1 AT4G10190 25.817 306 198 11 10 302 9 298 3.75e-13 70.5
MS.gene58320.t1 AT1G12855 24.233 326 194 13 10 298 71 380 4.61e-13 70.5
MS.gene58320.t1 AT2G02030 24.176 273 139 11 8 234 37 287 6.66e-13 69.3
MS.gene58320.t1 AT4G04690 27.386 241 133 9 10 237 11 222 2.20e-12 68.2
MS.gene58320.t1 AT1G30790 27.619 315 182 15 9 295 8 304 2.59e-12 68.2
MS.gene58320.t1 AT1G33530 27.599 279 153 13 10 271 97 343 2.67e-12 68.2
MS.gene58320.t1 AT2G40910 23.323 313 205 13 7 298 66 364 6.58e-12 67.0
MS.gene58320.t1 AT2G40910 23.323 313 205 13 7 298 59 357 7.96e-12 66.6
MS.gene58320.t1 AT5G62660 27.566 341 193 14 10 319 41 358 8.72e-12 66.2
MS.gene58320.t1 AT5G62510 26.239 343 194 18 10 319 44 360 1.95e-11 65.5
MS.gene58320.t1 AT5G47300 25.974 308 189 14 10 301 46 330 2.25e-11 65.5
MS.gene58320.t1 AT1G50870 34.884 129 70 2 7 125 28 152 3.77e-11 64.7
MS.gene58320.t1 AT1G11620 25.320 391 223 20 7 361 3 360 9.11e-11 63.2
MS.gene58320.t1 AT1G32420 25.670 261 151 10 10 255 37 269 9.26e-11 62.8

Find 80 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGTTGTCTTTGATTTAA+TGG 0.084690 8.2:-65734813 MS.gene58320:CDS
TATTCCTCTTATGAAATTAA+AGG 0.191559 8.2:-65735220 MS.gene58320:CDS
GACCATGATCCTATGTATTA+TGG 0.204606 8.2:-65734752 MS.gene58320:CDS
TATTATGGTTTGTGGGTATT+TGG 0.218240 8.2:-65734737 MS.gene58320:CDS
CCAAAACCATATTGATGATA+TGG 0.272824 8.2:+65735076 None:intergenic
CCATATCATCAATATGGTTT+TGG 0.274255 8.2:-65735076 MS.gene58320:CDS
TCGATCGAGAGATGATTATT+TGG 0.284366 8.2:-65735047 MS.gene58320:CDS
ATAATTGGACGGTTGAAATA+TGG 0.285135 8.2:-65734682 MS.gene58320:CDS
TTGGAGAATTTCTCAGTCTA+TGG 0.288501 8.2:-65734718 MS.gene58320:CDS
ATGGCAACTTCAGATGCTTT+TGG 0.290380 8.2:+65734476 None:intergenic
TTGTCCTCTTGTCCAACCTT+AGG 0.320103 8.2:-65735016 MS.gene58320:CDS
TGGACAGTATGCATGTAATT+TGG 0.332817 8.2:+65735096 None:intergenic
TACTGTCCATATCATCAATA+TGG 0.342913 8.2:-65735082 MS.gene58320:CDS
TAATCCTGCTCTAGAAGCTT+TGG 0.343636 8.2:+65734895 None:intergenic
GATATTAACACAATTCTTGC+TGG 0.345925 8.2:+65735343 None:intergenic
TGAACCTTTAATTTCATAAG+AGG 0.347966 8.2:+65735216 None:intergenic
TCAAATCTTGCTGAGGTTGC+CGG 0.349793 8.2:-65735458 MS.gene58320:CDS
TGAAACAGAAGCATGGTTAA+TGG 0.354239 8.2:+65735273 None:intergenic
TCTTCAATGGGGCTATTCAT+TGG 0.385937 8.2:-65734871 MS.gene58320:CDS
TAACCATGCTTCTGTTTCAC+TGG 0.389955 8.2:-65735269 MS.gene58320:CDS
CAATGGGGCTATTCATTGGT+TGG 0.407106 8.2:-65734867 MS.gene58320:CDS
AATCCTGCTCTAGAAGCTTT+GGG 0.420953 8.2:+65734896 None:intergenic
AGAGCAGGATTATTCTTCAA+TGG 0.421802 8.2:-65734884 MS.gene58320:CDS
GAGCAGGATTATTCTTCAAT+GGG 0.421969 8.2:-65734883 MS.gene58320:CDS
TTCATAAGAGGAATAACTTC+CGG 0.428595 8.2:+65735228 None:intergenic
TGTCCTCTTGTCCAACCTTA+GGG 0.429336 8.2:-65735015 MS.gene58320:CDS
AATTTCTCAGTCTATGGAAT+AGG 0.433887 8.2:-65734712 MS.gene58320:CDS
GGATCATGGTCGAAATCATC+TGG 0.438205 8.2:+65734764 None:intergenic
ATCCTATGTATTATGGTTTG+TGG 0.452973 8.2:-65734745 MS.gene58320:CDS
TCTTTGTGAAATCTAGAAGA+TGG 0.459093 8.2:+65735142 None:intergenic
GTAAACTTGCTCACGGTCAC+CGG 0.465511 8.2:+65734427 None:intergenic
TTCCGGAAAGTAGAAAAGTA+TGG 0.470318 8.2:+65735245 None:intergenic
GCATGTAATTTGGCAGCAAA+AGG 0.483005 8.2:+65735106 None:intergenic
TAATTGGACGGTTGAAATAT+GGG 0.484830 8.2:-65734681 MS.gene58320:CDS
GAGAGAATTCCAACAGGAGG+TGG 0.487546 8.2:+65735313 None:intergenic
TCAAATGCGTTTGTAAGTCA+TGG 0.487780 8.2:-65735417 MS.gene58320:CDS
GAGTCTATGCTTTCACTCCC+CGG 0.494342 8.2:-65734446 MS.gene58320:CDS
TATCCCAAAGCTTCTAGAGC+AGG 0.499157 8.2:-65734899 MS.gene58320:CDS
TCTCATTGAGAGATAATATG+TGG 0.503671 8.2:-65734967 MS.gene58320:CDS
GGTATTCAAATAAGTGAAGC+GGG 0.505148 8.2:+65734928 None:intergenic
TAAACTTGCTCACGGTCACC+GGG 0.505828 8.2:+65734428 None:intergenic
AATACAAACAACATTCGTCT+TGG 0.508117 8.2:-65734652 MS.gene58320:CDS
TCCTATGTATTATGGTTTGT+GGG 0.509991 8.2:-65734744 MS.gene58320:CDS
AAATTAAAGGTTCATGCAGA+GGG 0.521334 8.2:-65735207 MS.gene58320:CDS
TCAAGAACTCCACCTCCTGT+TGG 0.523775 8.2:-65735322 MS.gene58320:CDS
TTGTCTTTGATTTAATGGAA+AGG 0.526787 8.2:-65734808 MS.gene58320:CDS
GTTCAACAAACCTCTACGTA+TGG 0.527840 8.2:-65735168 MS.gene58320:CDS
AACCATAATACATAGGATCA+TGG 0.533187 8.2:+65734750 None:intergenic
TCTATAGAGAGAATTCCAAC+AGG 0.539769 8.2:+65735307 None:intergenic
TTTCCCTAAGGTTGGACAAG+AGG 0.544513 8.2:+65735012 None:intergenic
AAACTTAATAGAGACTTCAC+CGG 0.551135 8.2:+65735439 None:intergenic
ATTGGAACTGATGGTGGTCA+TGG 0.553703 8.2:-65734551 MS.gene58320:CDS
AACTGATGGTGGTCATGGAT+TGG 0.565081 8.2:-65734546 MS.gene58320:CDS
GAAATTAAAGGTTCATGCAG+AGG 0.568478 8.2:-65735208 MS.gene58320:CDS
CTGTGGATAATGACATACCT+TGG 0.573000 8.2:-65734610 MS.gene58320:CDS
CAAGGTATGTCATTATCCAC+AGG 0.577768 8.2:+65734611 None:intergenic
TGGTCGAAATCATCTGGAAG+AGG 0.577796 8.2:+65734770 None:intergenic
GGTGATATTATTGGAACTGA+TGG 0.578976 8.2:-65734560 MS.gene58320:CDS
TAATCATTCAAATCTTGCTG+AGG 0.580289 8.2:-65735465 MS.gene58320:CDS
ATTTGAATGATTAATTCAGA+AGG 0.584114 8.2:+65735475 None:intergenic
CCATCTTGTAAACTTGCTCA+CGG 0.588651 8.2:+65734420 None:intergenic
CTTCACTTATTTGAATACCA+CGG 0.590525 8.2:-65734924 MS.gene58320:CDS
AATATGTGGTATGAAATTGA+AGG 0.595430 8.2:-65734953 MS.gene58320:CDS
TAAGTCTCTTGTAATTCCTG+TGG 0.613031 8.2:-65734627 MS.gene58320:CDS
AAGCATAGACTCTTTATACA+TGG 0.617292 8.2:+65734457 None:intergenic
ACCCACAAACCATAATACAT+AGG 0.624621 8.2:+65734743 None:intergenic
TGGTATTCAAATAAGTGAAG+CGG 0.626214 8.2:+65734927 None:intergenic
ACATGTGTATTCGCAAAGTG+AGG 0.642323 8.2:+65735376 None:intergenic
TTTGGCAGCAAAAGGAGACA+AGG 0.642423 8.2:+65735114 None:intergenic
GATATTATTGGAACTGATGG+TGG 0.647278 8.2:-65734557 MS.gene58320:CDS
AGAAGCTTTGGGATAATCCG+TGG 0.647471 8.2:+65734907 None:intergenic
CCGTGAGCAAGTTTACAAGA+TGG 0.648413 8.2:-65734420 MS.gene58320:CDS
AAGATGGATTCCATACGTAG+AGG 0.661639 8.2:+65735158 None:intergenic
TTGGCAGCAAAAGGAGACAA+GGG 0.663627 8.2:+65735115 None:intergenic
GGTCCAGTGAAACAGAAGCA+TGG 0.680839 8.2:+65735266 None:intergenic
ATAGAGAGAATTCCAACAGG+AGG 0.683772 8.2:+65735310 None:intergenic
AGCAGGATTATTCTTCAATG+GGG 0.698376 8.2:-65734882 MS.gene58320:CDS
GTATTCAAATAAGTGAAGCG+GGG 0.724872 8.2:+65734929 None:intergenic
GAGTATATAGGGGAAAACCA+AGG 0.732405 8.2:+65734593 None:intergenic
AAACTTGCTCACGGTCACCG+GGG 0.753917 8.2:+65734429 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTGAATGATTAATTCAGA+AGG + chr8.2:65734433-65734452 None:intergenic 20.0%
!! TATTCCTCTTATGAAATTAA+AGG - chr8.2:65734685-65734704 MS.gene58320:CDS 20.0%
!!! TATTGTTGTCTTTGATTTAA+TGG - chr8.2:65735092-65735111 MS.gene58320:CDS 20.0%
! AATATGTGGTATGAAATTGA+AGG - chr8.2:65734952-65734971 MS.gene58320:CDS 25.0%
! ACAAAAAGTGGTGATATTAT+TGG - chr8.2:65735336-65735355 MS.gene58320:CDS 25.0%
!! ACTTTTTGTAGAGTATATAG+GGG + chr8.2:65735325-65735344 None:intergenic 25.0%
!! TGAACCTTTAATTTCATAAG+AGG + chr8.2:65734692-65734711 None:intergenic 25.0%
!! TTGTCTTTGATTTAATGGAA+AGG - chr8.2:65735097-65735116 MS.gene58320:CDS 25.0%
!!! CACTTTTTGTAGAGTATATA+GGG + chr8.2:65735326-65735345 None:intergenic 25.0%
!!! GGAATAGGAATTTTGATAAT+TGG - chr8.2:65735208-65735227 MS.gene58320:CDS 25.0%
!!! TAGGAATTTTGATAATTGGA+CGG - chr8.2:65735212-65735231 MS.gene58320:CDS 25.0%
AAACTTAATAGAGACTTCAC+CGG + chr8.2:65734469-65734488 None:intergenic 30.0%
AAATTAAAGGTTCATGCAGA+GGG - chr8.2:65734698-65734717 MS.gene58320:CDS 30.0%
AACCATAATACATAGGATCA+TGG + chr8.2:65735158-65735177 None:intergenic 30.0%
AAGCATAGACTCTTTATACA+TGG + chr8.2:65735451-65735470 None:intergenic 30.0%
AATACAAACAACATTCGTCT+TGG - chr8.2:65735253-65735272 MS.gene58320:CDS 30.0%
AATTTCTCAGTCTATGGAAT+AGG - chr8.2:65735193-65735212 MS.gene58320:CDS 30.0%
ATAATTGGACGGTTGAAATA+TGG - chr8.2:65735223-65735242 MS.gene58320:CDS 30.0%
ATCCTATGTATTATGGTTTG+TGG - chr8.2:65735160-65735179 MS.gene58320:CDS 30.0%
CCTATATACTCTACAAAAAG+TGG - chr8.2:65735324-65735343 MS.gene58320:CDS 30.0%
CTTCACTTATTTGAATACCA+CGG - chr8.2:65734981-65735000 MS.gene58320:CDS 30.0%
GATATTAACACAATTCTTGC+TGG + chr8.2:65734565-65734584 None:intergenic 30.0%
TAATCATTCAAATCTTGCTG+AGG - chr8.2:65734440-65734459 MS.gene58320:CDS 30.0%
TAATTGGACGGTTGAAATAT+GGG - chr8.2:65735224-65735243 MS.gene58320:CDS 30.0%
TACTGTCCATATCATCAATA+TGG - chr8.2:65734823-65734842 MS.gene58320:CDS 30.0%
TCTCATTGAGAGATAATATG+TGG - chr8.2:65734938-65734957 MS.gene58320:CDS 30.0%
TCTTTGTGAAATCTAGAAGA+TGG + chr8.2:65734766-65734785 None:intergenic 30.0%
TGGTATTCAAATAAGTGAAG+CGG + chr8.2:65734981-65735000 None:intergenic 30.0%
TTCATAAGAGGAATAACTTC+CGG + chr8.2:65734680-65734699 None:intergenic 30.0%
! ATATGATGAAGTTTTCCCTA+AGG + chr8.2:65734908-65734927 None:intergenic 30.0%
! ATGCAGAGGGTTTATATTTT+TGG - chr8.2:65734711-65734730 MS.gene58320:CDS 30.0%
! CCAAAACCATATTGATGATA+TGG + chr8.2:65734832-65734851 None:intergenic 30.0%
! CCATATCATCAATATGGTTT+TGG - chr8.2:65734829-65734848 MS.gene58320:CDS 30.0%
! TATTATGGTTTGTGGGTATT+TGG - chr8.2:65735168-65735187 MS.gene58320:CDS 30.0%
! TCCTATGTATTATGGTTTGT+GGG - chr8.2:65735161-65735180 MS.gene58320:CDS 30.0%
!!! CCACTTTTTGTAGAGTATAT+AGG + chr8.2:65735327-65735346 None:intergenic 30.0%
ACCCACAAACCATAATACAT+AGG + chr8.2:65735165-65735184 None:intergenic 35.0%
AGAGCAGGATTATTCTTCAA+TGG - chr8.2:65735021-65735040 MS.gene58320:CDS 35.0%
AGCAGGATTATTCTTCAATG+GGG - chr8.2:65735023-65735042 MS.gene58320:CDS 35.0%
GAAATTAAAGGTTCATGCAG+AGG - chr8.2:65734697-65734716 MS.gene58320:CDS 35.0%
GACCATGATCCTATGTATTA+TGG - chr8.2:65735153-65735172 MS.gene58320:CDS 35.0%
GAGCAGGATTATTCTTCAAT+GGG - chr8.2:65735022-65735041 MS.gene58320:CDS 35.0%
GATATTATTGGAACTGATGG+TGG - chr8.2:65735348-65735367 MS.gene58320:CDS 35.0%
GGTATTCAAATAAGTGAAGC+GGG + chr8.2:65734980-65734999 None:intergenic 35.0%
GGTGATATTATTGGAACTGA+TGG - chr8.2:65735345-65735364 MS.gene58320:CDS 35.0%
GTATTCAAATAAGTGAAGCG+GGG + chr8.2:65734979-65734998 None:intergenic 35.0%
TAAGTCTCTTGTAATTCCTG+TGG - chr8.2:65735278-65735297 MS.gene58320:CDS 35.0%
TCAAATGCGTTTGTAAGTCA+TGG - chr8.2:65734488-65734507 MS.gene58320:CDS 35.0%
TCGATCGAGAGATGATTATT+TGG - chr8.2:65734858-65734877 MS.gene58320:CDS 35.0%
TCTATAGAGAGAATTCCAAC+AGG + chr8.2:65734601-65734620 None:intergenic 35.0%
TGGACAGTATGCATGTAATT+TGG + chr8.2:65734812-65734831 None:intergenic 35.0%
TTCCGGAAAGTAGAAAAGTA+TGG + chr8.2:65734663-65734682 None:intergenic 35.0%
TTGGAGAATTTCTCAGTCTA+TGG - chr8.2:65735187-65735206 MS.gene58320:CDS 35.0%
! GACCATACTTTTCTACTTTC+CGG - chr8.2:65734658-65734677 MS.gene58320:CDS 35.0%
! TGAAACAGAAGCATGGTTAA+TGG + chr8.2:65734635-65734654 None:intergenic 35.0%
ACATGTGTATTCGCAAAGTG+AGG + chr8.2:65734532-65734551 None:intergenic 40.0%
ATAGAGAGAATTCCAACAGG+AGG + chr8.2:65734598-65734617 None:intergenic 40.0%
CAAGGTATGTCATTATCCAC+AGG + chr8.2:65735297-65735316 None:intergenic 40.0%
CTGTGGATAATGACATACCT+TGG - chr8.2:65735295-65735314 MS.gene58320:CDS 40.0%
GAGTATATAGGGGAAAACCA+AGG + chr8.2:65735315-65735334 None:intergenic 40.0%
GCATGTAATTTGGCAGCAAA+AGG + chr8.2:65734802-65734821 None:intergenic 40.0%
GTTCAACAAACCTCTACGTA+TGG - chr8.2:65734737-65734756 MS.gene58320:CDS 40.0%
TAACCATGCTTCTGTTTCAC+TGG - chr8.2:65734636-65734655 MS.gene58320:CDS 40.0%
TCTTCAATGGGGCTATTCAT+TGG - chr8.2:65735034-65735053 MS.gene58320:CDS 40.0%
! AAGATGGATTCCATACGTAG+AGG + chr8.2:65734750-65734769 None:intergenic 40.0%
! ATGGCAACTTCAGATGCTTT+TGG + chr8.2:65735432-65735451 None:intergenic 40.0%
! CCATCTTGTAAACTTGCTCA+CGG + chr8.2:65735488-65735507 None:intergenic 40.0%
! GATGAAGTTTTCCCTAAGGT+TGG + chr8.2:65734904-65734923 None:intergenic 40.0%
!! AATCCTGCTCTAGAAGCTTT+GGG + chr8.2:65735012-65735031 None:intergenic 40.0%
!! TAATCCTGCTCTAGAAGCTT+TGG + chr8.2:65735013-65735032 None:intergenic 40.0%
CAATGGGGCTATTCATTGGT+TGG - chr8.2:65735038-65735057 MS.gene58320:CDS 45.0%
CCGTGAGCAAGTTTACAAGA+TGG - chr8.2:65735485-65735504 MS.gene58320:CDS 45.0%
GGATCATGGTCGAAATCATC+TGG + chr8.2:65735144-65735163 None:intergenic 45.0%
TCAAATCTTGCTGAGGTTGC+CGG - chr8.2:65734447-65734466 MS.gene58320:CDS 45.0%
TGGTCGAAATCATCTGGAAG+AGG + chr8.2:65735138-65735157 None:intergenic 45.0%
TGTCCTCTTGTCCAACCTTA+GGG - chr8.2:65734890-65734909 MS.gene58320:CDS 45.0%
TTGGCAGCAAAAGGAGACAA+GGG + chr8.2:65734793-65734812 None:intergenic 45.0%
TTGTCCTCTTGTCCAACCTT+AGG - chr8.2:65734889-65734908 MS.gene58320:CDS 45.0%
TTTCCCTAAGGTTGGACAAG+AGG + chr8.2:65734896-65734915 None:intergenic 45.0%
TTTGGCAGCAAAAGGAGACA+AGG + chr8.2:65734794-65734813 None:intergenic 45.0%
!! AACTGATGGTGGTCATGGAT+TGG - chr8.2:65735359-65735378 MS.gene58320:CDS 45.0%
!! AGAAGCTTTGGGATAATCCG+TGG + chr8.2:65735001-65735020 None:intergenic 45.0%
!! ATTGGAACTGATGGTGGTCA+TGG - chr8.2:65735354-65735373 MS.gene58320:CDS 45.0%
!! TATCCCAAAGCTTCTAGAGC+AGG - chr8.2:65735006-65735025 MS.gene58320:CDS 45.0%
GAGAGAATTCCAACAGGAGG+TGG + chr8.2:65734595-65734614 None:intergenic 50.0%
GAGTCTATGCTTTCACTCCC+CGG - chr8.2:65735459-65735478 MS.gene58320:CDS 50.0%
GGTCCAGTGAAACAGAAGCA+TGG + chr8.2:65734642-65734661 None:intergenic 50.0%
TCAAGAACTCCACCTCCTGT+TGG - chr8.2:65734583-65734602 MS.gene58320:CDS 50.0%
! GTAAACTTGCTCACGGTCAC+CGG + chr8.2:65735481-65735500 None:intergenic 50.0%
! TAAACTTGCTCACGGTCACC+GGG + chr8.2:65735480-65735499 None:intergenic 50.0%
! AAACTTGCTCACGGTCACCG+GGG + chr8.2:65735479-65735498 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 65734400 65735527 65734400 ID=MS.gene58320
chr8.2 mRNA 65734400 65735527 65734400 ID=MS.gene58320.t1;Parent=MS.gene58320
chr8.2 exon 65734400 65735527 65734400 ID=MS.gene58320.t1.exon1;Parent=MS.gene58320.t1
chr8.2 CDS 65734400 65735527 65734400 ID=cds.MS.gene58320.t1;Parent=MS.gene58320.t1
Gene Sequence

>MS.gene58320

ATGGCAAACATGAACAAGACGTTGTATCTTCCTTCTGAATTAATCATTCAAATCTTGCTGAGGTTGCCGGTGAAGTCTCTATTAAGTTTCAAATGCGTTTGTAAGTCATGGTTTTCTCTTATCTCTGATCCTCACTTTGCGAATACACATGTTGATGTTTCTCCAGCAAGAATTGTGTTAATATCAAGAACTCCACCTCCTGTTGGAATTCTCTCTATAGATTTTGAAACATCCATTAACCATGCTTCTGTTTCACTGGACCATACTTTTCTACTTTCCGGAAGTTATTCCTCTTATGAAATTAAAGGTTCATGCAGAGGGTTTATATTTTTGGACTGTTCAACAAACCTCTACGTATGGAATCCATCTTCTAGATTTCACAAAGAAATACCCTTGTCTCCTTTTGCTGCCAAATTACATGCATACTGTCCATATCATCAATATGGTTTTGGTTATGATCGATCGAGAGATGATTATTTGGTGATTTTATTGTCCTCTTGTCCAACCTTAGGGAAAACTTCATCATATTTAGAGTTTTTCTCATTGAGAGATAATATGTGGTATGAAATTGAAGGACCCCGCTTCACTTATTTGAATACCACGGATTATCCCAAAGCTTCTAGAGCAGGATTATTCTTCAATGGGGCTATTCATTGGTTGGCTTCTCGTTATCATGATATGCGAGTGAAAGTTATTGTTGTCTTTGATTTAATGGAAAGGAAACTGTTAGAGATACCTCTTCCAGATGATTTCGACCATGATCCTATGTATTATGGTTTGTGGGTATTTGGAGAATTTCTCAGTCTATGGAATAGGAATTTTGATAATTGGACGGTTGAAATATGGGTGATGAAATACAAACAACATTCGTCTTGGACTAAGTCTCTTGTAATTCCTGTGGATAATGACATACCTTGGTTTTCCCCTATATACTCTACAAAAAGTGGTGATATTATTGGAACTGATGGTGGTCATGGATTGGTGAAGTATAATAACAAAATTCAACTGTTAGAGTATCTTGAAATAGATCCAAAAGCATCTGAAGTTGCCATGTATAAAGAGTCTATGCTTTCACTCCCCGGTGACCGTGAGCAAGTTTACAAGATGGCAAAAAATCACGAAGAATGA

Protein sequence

>MS.gene58320.t1

MANMNKTLYLPSELIIQILLRLPVKSLLSFKCVCKSWFSLISDPHFANTHVDVSPARIVLISRTPPPVGILSIDFETSINHASVSLDHTFLLSGSYSSYEIKGSCRGFIFLDCSTNLYVWNPSSRFHKEIPLSPFAAKLHAYCPYHQYGFGYDRSRDDYLVILLSSCPTLGKTSSYLEFFSLRDNMWYEIEGPRFTYLNTTDYPKASRAGLFFNGAIHWLASRYHDMRVKVIVVFDLMERKLLEIPLPDDFDHDPMYYGLWVFGEFLSLWNRNFDNWTVEIWVMKYKQHSSWTKSLVIPVDNDIPWFSPIYSTKSGDIIGTDGGHGLVKYNNKIQLLEYLEIDPKASEVAMYKESMLSLPGDREQVYKMAKNHEE