AlfalfaGEDB | MS.gene035236

M. sativa cultivar XinJiangDaYe / MS.gene035236

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene035236.t1	GAU41597.1	64.4	191	66	1	7	197	113	301	1.30E-64	256.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene035236.t1	Q8GXC7	27.0	189	118	5	16	195	242	419	3.0e-09	63.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene035236.t1	A0A2Z6PDC2	64.4	191	66	1	7	197	113	301	9.6e-65	256.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene035236	MS.gene060366	PPI
MS.gene035236	MS.gene44428	PPI
MS.gene57529	MS.gene035236	PPI
MS.gene035236	MS.gene035235	PPI
MS.gene035236	MS.gene058703	PPI
MS.gene035236	MS.gene033432	PPI
MS.gene035236	MS.gene50329	PPI
MS.gene035236	MS.gene57528	PPI
MS.gene035236	MS.gene045476	PPI
MS.gene035236	MS.gene024000	PPI
MS.gene035236	MS.gene012215	PPI
MS.gene40902	MS.gene035236	PPI
MS.gene035236	MS.gene033079	PPI
MS.gene26957	MS.gene035236	PPI
MS.gene035236	MS.gene055694	PPI
MS.gene035236	MS.gene059101	PPI
MS.gene036582	MS.gene035236	PPI
MS.gene035236	MS.gene033444	PPI
MS.gene066620	MS.gene035236	PPI
MS.gene035236	MS.gene58316	PPI
MS.gene035236	MS.gene033430	PPI
MS.gene035236	MS.gene58321	PPI
MS.gene035236	MS.gene016524	PPI
MS.gene035236	MS.gene87564	PPI
MS.gene035236	MS.gene58315	PPI
MS.gene035236	MS.gene36595	PPI
MS.gene58781	MS.gene035236	PPI
MS.gene011106	MS.gene035236	PPI
MS.gene035236	MS.gene045140	PPI
MS.gene44886	MS.gene035236	PPI
MS.gene035236	MS.gene041473	PPI
MS.gene35068	MS.gene035236	PPI
MS.gene035236	MS.gene50311	PPI
MS.gene000035	MS.gene035236	PPI
MS.gene035236	MS.gene064112	PPI
MS.gene035236	MS.gene058989	PPI
MS.gene035236	MS.gene036556	PPI
MS.gene87573	MS.gene035236	PPI
MS.gene035236	MS.gene57538	PPI
MS.gene035236	MS.gene041468	PPI
MS.gene035236	MS.gene060367	PPI
MS.gene035236	MS.gene058693	PPI
MS.gene035236	MS.gene27319	PPI
MS.gene035236	MS.gene64001	PPI
MS.gene035236	MS.gene015089	PPI
MS.gene019504	MS.gene035236	PPI
MS.gene035236	MS.gene041395	PPI
MS.gene059156	MS.gene035236	PPI
MS.gene035236	MS.gene066641	PPI
MS.gene035236	MS.gene51189	PPI
MS.gene035236	MS.gene046958	PPI
MS.gene035236	MS.gene24286	PPI
MS.gene035236	MS.gene066635	PPI
MS.gene019505	MS.gene035236	PPI
MS.gene035236	MS.gene90744	PPI
MS.gene035236	MS.gene58783	PPI
MS.gene26949	MS.gene035236	PPI
MS.gene035236	MS.gene036760	PPI
MS.gene035236	MS.gene40988	PPI
MS.gene035236	MS.gene27283	PPI
MS.gene036760	MS.gene035236	PPI
MS.gene035236	MS.gene24173	PPI
MS.gene035236	MS.gene036584	PPI
MS.gene035236	MS.gene036662	PPI
MS.gene58311	MS.gene035236	PPI
MS.gene035236	MS.gene88776	PPI
MS.gene033432	MS.gene035236	PPI
MS.gene035236	MS.gene42451	PPI
MS.gene035236	MS.gene035261	PPI
MS.gene035236	MS.gene023999	PPI
MS.gene035236	MS.gene070461	PPI
MS.gene59639	MS.gene035236	PPI
MS.gene035236	MS.gene69307	PPI
MS.gene035236	MS.gene59639	PPI
MS.gene035236	MS.gene036581	PPI
MS.gene035236	MS.gene019507	PPI
MS.gene035236	MS.gene033431	PPI
MS.gene010758	MS.gene035236	PPI
MS.gene035236	MS.gene058692	PPI
MS.gene035236	MS.gene000036	PPI
MS.gene019506	MS.gene035236	PPI
MS.gene50326	MS.gene035236	PPI
MS.gene035236	MS.gene50320	PPI
MS.gene035236	MS.gene58314	PPI
MS.gene035236	MS.gene87557	PPI
MS.gene035236	MS.gene51199	PPI
MS.gene035236	MS.gene035263	PPI
MS.gene035236	MS.gene67501	PPI
MS.gene035236	MS.gene96406	PPI
MS.gene035236	MS.gene27285	PPI
MS.gene035236	MS.gene035262	PPI
MS.gene035236	MS.gene77857	PPI
MS.gene035236	MS.gene028390	PPI
MS.gene035236	MS.gene40878	PPI
MS.gene035236	MS.gene57526	PPI
MS.gene034686	MS.gene035236	PPI
MS.gene035236	MS.gene96407	PPI
MS.gene035236	MS.gene058694	PPI
MS.gene035236	MS.gene069075	PPI
MS.gene42452	MS.gene035236	PPI
MS.gene035236	MS.gene051820	PPI
MS.gene063414	MS.gene035236	PPI
MS.gene035236	MS.gene064091	PPI
MS.gene035236	MS.gene047279	PPI
MS.gene035236	MS.gene060370	PPI
MS.gene035236	MS.gene50305	PPI
MS.gene035236	MS.gene024002	PPI
MS.gene035236	MS.gene032969	PPI
MS.gene035236	MS.gene68890	PPI
MS.gene035236	MS.gene041392	PPI
MS.gene035236	MS.gene50297	PPI
MS.gene035236	MS.gene42445	PPI
MS.gene051820	MS.gene035236	PPI
MS.gene035236	MS.gene86273	PPI
MS.gene035236	MS.gene26830	PPI
MS.gene035236	MS.gene40985	PPI
MS.gene035236	MS.gene22715	PPI
MS.gene58320	MS.gene035236	PPI
MS.gene035236	MS.gene038756	PPI
MS.gene81242	MS.gene035236	PPI
MS.gene035236	MS.gene92376	PPI
MS.gene27283	MS.gene035236	PPI
MS.gene035236	MS.gene51207	PPI
MS.gene035236	MS.gene63657	PPI
MS.gene035236	MS.gene059157	PPI
MS.gene035236	MS.gene57527	PPI
MS.gene035236	MS.gene024004	PPI
MS.gene51202	MS.gene035236	PPI
MS.gene035236	MS.gene070462	PPI
MS.gene87562	MS.gene035236	PPI
MS.gene035236	MS.gene061240	PPI
MS.gene035236	MS.gene54049	PPI
MS.gene035236	MS.gene036582	PPI
MS.gene035236	MS.gene031590	PPI
MS.gene035236	MS.gene033427	PPI
MS.gene035236	MS.gene88780	PPI
MS.gene035236	MS.gene064086	PPI
MS.gene035236	MS.gene035234	PPI
MS.gene87569	MS.gene035236	PPI
MS.gene035236	MS.gene50326	PPI
MS.gene064104	MS.gene035236	PPI
MS.gene041491	MS.gene035236	PPI
MS.gene035236	MS.gene034686	PPI
MS.gene035236	MS.gene41046	PPI
MS.gene035236	MS.gene066639	PPI
MS.gene035236	MS.gene50332	PPI
MS.gene035236	MS.gene42447	PPI
MS.gene035236	MS.gene77856	PPI
MS.gene035236	MS.gene024979	PPI
MS.gene059096	MS.gene035236	PPI
MS.gene035236	MS.gene041475	PPI
MS.gene035236	MS.gene43789	PPI
MS.gene035236	MS.gene64203	PPI
MS.gene064091	MS.gene035236	PPI
MS.gene035236	MS.gene24826	PPI
MS.gene035236	MS.gene40904	PPI
MS.gene035236	MS.gene044425	PPI
MS.gene045476	MS.gene035236	PPI
MS.gene035236	MS.gene43790	PPI
MS.gene035236	MS.gene032970	PPI
MS.gene035236	MS.gene57537	PPI
MS.gene43796	MS.gene035236	PPI
MS.gene034690	MS.gene035236	PPI
MS.gene035236	MS.gene064104	PPI
MS.gene035236	MS.gene81242	PPI
MS.gene035236	MS.gene59637	PPI
MS.gene035236	MS.gene033426	PPI
MS.gene035236	MS.gene27022	PPI
MS.gene035236	MS.gene57530	PPI
MS.gene035236	MS.gene97996	PPI
MS.gene035236	MS.gene87585	PPI
MS.gene035236	MS.gene041390	PPI
MS.gene035236	MS.gene024009	PPI
MS.gene035236	MS.gene036599	PPI
MS.gene50298	MS.gene035236	PPI
MS.gene035236	MS.gene40887	PPI
MS.gene035236	MS.gene87200	PPI
MS.gene035236	MS.gene42444	PPI
MS.gene035236	MS.gene67687	PPI
MS.gene035236	MS.gene62398	PPI
MS.gene035236	MS.gene26101	PPI
MS.gene035236	MS.gene006705	PPI
MS.gene035236	MS.gene80884	PPI
MS.gene035236	MS.gene035237	PPI
MS.gene035236	MS.gene44886	PPI
MS.gene035236	MS.gene50309	PPI
MS.gene035236	MS.gene041394	PPI
MS.gene035236	MS.gene059156	PPI
MS.gene035236	MS.gene03060	PPI
MS.gene69309	MS.gene035236	PPI
MS.gene035236	MS.gene036664	PPI
MS.gene035236	MS.gene053257	PPI
MS.gene035236	MS.gene58241	PPI
MS.gene035236	MS.gene010758	PPI
MS.gene035236	MS.gene77858	PPI
MS.gene035236	MS.gene51201	PPI
MS.gene031591	MS.gene035236	PPI
MS.gene035236	MS.gene058696	PPI
MS.gene035236	MS.gene009893	PPI
MS.gene035236	MS.gene045475	PPI
MS.gene035236	MS.gene63655	PPI
MS.gene035236	MS.gene50336	PPI
MS.gene035236	MS.gene39262	PPI
MS.gene035236	MS.gene87586	PPI
MS.gene035236	MS.gene77704	PPI
MS.gene035236	MS.gene019505	PPI
MS.gene035236	MS.gene58320	PPI
MS.gene87559	MS.gene035236	PPI
MS.gene035236	MS.gene033083	PPI
MS.gene035236	MS.gene75875	PPI
MS.gene035236	MS.gene63658	PPI
MS.gene035236	MS.gene60027	PPI
MS.gene035236	MS.gene033081	PPI
MS.gene035236	MS.gene036663	PPI
MS.gene035236	MS.gene68580	PPI
MS.gene035236	MS.gene072177	PPI
MS.gene035236	MS.gene57525	PPI
MS.gene063826	MS.gene035236	PPI
MS.gene035236	MS.gene023996	PPI
MS.gene035236	MS.gene030114	PPI
MS.gene035236	MS.gene58716	PPI
MS.gene035236	MS.gene045473	PPI
MS.gene44892	MS.gene035236	PPI
MS.gene035236	MS.gene50301	PPI
MS.gene035236	MS.gene88774	PPI
MS.gene035236	MS.gene045474	PPI
MS.gene035236	MS.gene036558	PPI
MS.gene035236	MS.gene041474	PPI
MS.gene064111	MS.gene035236	PPI
MS.gene035236	MS.gene40984	PPI
MS.gene035236	MS.gene066623	PPI
MS.gene035236	MS.gene064108	PPI
MS.gene26829	MS.gene035236	PPI
MS.gene035236	MS.gene064090	PPI
MS.gene035236	MS.gene24208	PPI
MS.gene035236	MS.gene58317	PPI
MS.gene75875	MS.gene035236	PPI
MS.gene035236	MS.gene90742	PPI
MS.gene035236	MS.gene24212	PPI
MS.gene035236	MS.gene51191	PPI
MS.gene035236	MS.gene40902	PPI
MS.gene006710	MS.gene035236	PPI
MS.gene035236	MS.gene58240	PPI
MS.gene58722	MS.gene035236	PPI
MS.gene035236	MS.gene96448	PPI
MS.gene035236	MS.gene063472	PPI
MS.gene035236	MS.gene57717	PPI
MS.gene035236	MS.gene034680	PPI
MS.gene035236	MS.gene31587	PPI
MS.gene035236	MS.gene27021	PPI
MS.gene035236	MS.gene51208	PPI
MS.gene035236	MS.gene044563	PPI
MS.gene035236	MS.gene50327	PPI
MS.gene035236	MS.gene066626	PPI
MS.gene035236	MS.gene40982	PPI
MS.gene035236	MS.gene50339	PPI
MS.gene035236	MS.gene063474	PPI
MS.gene035236	MS.gene51190	PPI
MS.gene77856	MS.gene035236	PPI
MS.gene035236	MS.gene42452	PPI
MS.gene035236	MS.gene58785	PPI
MS.gene035236	MS.gene044426	PPI
MS.gene035236	MS.gene88416	PPI
MS.gene035236	MS.gene034681	PPI
MS.gene58313	MS.gene035236	PPI
MS.gene035236	MS.gene57532	PPI
MS.gene035236	MS.gene003076	PPI
MS.gene066622	MS.gene035236	PPI
MS.gene44883	MS.gene035236	PPI
MS.gene035236	MS.gene009892	PPI
MS.gene035236	MS.gene061241	PPI
MS.gene035236	MS.gene058669	PPI
MS.gene41046	MS.gene035236	PPI
MS.gene035236	MS.gene066120	PPI
MS.gene87588	MS.gene035236	PPI
MS.gene017412	MS.gene035236	PPI
MS.gene035236	MS.gene51192	PPI
MS.gene035236	MS.gene51188	PPI
MS.gene035236	MS.gene033875	PPI
MS.gene80884	MS.gene035236	PPI
MS.gene035236	MS.gene041489	PPI
MS.gene035236	MS.gene38220	PPI
MS.gene035236	MS.gene40986	PPI
MS.gene009883	MS.gene035236	PPI
MS.gene035236	MS.gene36704	PPI
MS.gene035236	MS.gene034688	PPI
MS.gene035236	MS.gene58239	PPI
MS.gene035236	MS.gene24213	PPI
MS.gene035236	MS.gene033440	PPI
MS.gene033427	MS.gene035236	PPI
MS.gene035236	MS.gene31637	PPI
MS.gene035236	MS.gene024011	PPI
MS.gene035236	MS.gene034677	PPI
MS.gene035236	MS.gene064109	PPI
MS.gene041474	MS.gene035236	PPI
MS.gene27020	MS.gene035236	PPI
MS.gene035236	MS.gene035238	PPI
MS.gene035236	MS.gene85043	PPI
MS.gene035236	MS.gene064114	PPI
MS.gene035236	MS.gene87584	PPI
MS.gene035236	MS.gene87563	PPI
MS.gene035236	MS.gene062698	PPI
MS.gene035236	MS.gene26829	PPI
MS.gene96126	MS.gene035236	PPI
MS.gene035236	MS.gene80610	PPI
MS.gene016524	MS.gene035236	PPI
MS.gene035236	MS.gene90743	PPI
MS.gene035236	MS.gene053256	PPI
MS.gene035236	MS.gene40886	PPI
MS.gene90744	MS.gene035236	PPI
MS.gene51204	MS.gene035236	PPI
MS.gene035236	MS.gene85454	PPI
MS.gene036557	MS.gene035236	PPI
MS.gene035236	MS.gene041391	PPI
MS.gene035236	MS.gene033443	PPI
MS.gene035236	MS.gene036583	PPI
MS.gene035236	MS.gene006711	PPI
MS.gene035236	MS.gene57536	PPI
MS.gene035236	MS.gene50307	PPI
MS.gene84698	MS.gene035236	PPI
MS.gene035236	MS.gene51200	PPI
MS.gene035236	MS.gene021553	PPI
MS.gene035236	MS.gene011106	PPI
MS.gene035236	MS.gene44887	PPI
MS.gene035236	MS.gene058701	PPI
MS.gene82082	MS.gene035236	PPI
MS.gene035236	MS.gene87554	PPI
MS.gene035236	MS.gene009891	PPI
MS.gene035236	MS.gene064083	PPI
MS.gene035236	MS.gene27051	PPI
MS.gene000038	MS.gene035236	PPI
MS.gene035236	MS.gene048193	PPI
MS.gene035236	MS.gene58312	PPI
MS.gene035236	MS.gene87562	PPI
MS.gene035236	MS.gene024420	PPI
MS.gene035236	MS.gene016220	PPI
MS.gene035236	MS.gene57533	PPI
MS.gene035236	MS.gene024008	PPI
MS.gene57535	MS.gene035236	PPI
MS.gene035236	MS.gene50337	PPI
MS.gene025887	MS.gene035236	PPI
MS.gene035236	MS.gene063670	PPI
MS.gene035236	MS.gene54541	PPI
MS.gene035236	MS.gene39265	PPI
MS.gene035236	MS.gene50306	PPI
MS.gene041470	MS.gene035236	PPI
MS.gene035236	MS.gene041393	PPI
MS.gene035236	MS.gene060368	PPI
MS.gene035236	MS.gene053299	PPI
MS.gene035236	MS.gene28758	PPI
MS.gene035236	MS.gene044429	PPI
MS.gene035236	MS.gene57531	PPI
MS.gene035236	MS.gene50304	PPI
MS.gene035236	MS.gene27284	PPI
MS.gene035236	MS.gene041388	PPI
MS.gene44885	MS.gene035236	PPI
MS.gene011679	MS.gene035236	PPI
MS.gene035236	MS.gene019503	PPI
MS.gene035236	MS.gene48221	PPI
MS.gene87586	MS.gene035236	PPI
MS.gene035236	MS.gene041470	PPI
MS.gene035236	MS.gene58319	PPI
MS.gene035236	MS.gene034762	PPI
MS.gene035236	MS.gene71159	PPI
MS.gene035236	MS.gene59943	PPI
MS.gene035236	MS.gene033441	PPI
MS.gene035236	MS.gene033442	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene035236.t1	MTR_3g103020	60.804	199	75	1	8	203	180	378	8.09e-80	243
MS.gene035236.t1	MTR_6g060650	59.794	194	76	1	9	202	181	372	1.74e-79	242
MS.gene035236.t1	MTR_4g117720	60.294	204	72	4	7	203	177	378	1.76e-78	239
MS.gene035236.t1	MTR_4g109280	61.616	198	70	4	9	203	165	359	1.05e-76	234
MS.gene035236.t1	MTR_4g116320	60.209	191	72	2	10	198	65	253	2.75e-71	217
MS.gene035236.t1	MTR_4g116330	56.771	192	81	1	14	203	189	380	1.87e-69	216
MS.gene035236.t1	MTR_4g109270	57.732	194	80	2	12	203	171	364	4.19e-69	215
MS.gene035236.t1	MTR_8g040935	56.436	202	83	3	7	203	7	208	1.77e-68	208
MS.gene035236.t1	MTR_4g094365	56.410	195	82	2	11	203	171	364	8.05e-67	209
MS.gene035236.t1	MTR_3g034180	56.219	201	78	4	9	202	291	488	7.64e-66	210
MS.gene035236.t1	MTR_4g023130	58.081	198	78	4	6	202	119	312	1.53e-64	202
MS.gene035236.t1	MTR_4g122850	54.455	202	85	6	7	203	165	364	1.71e-64	204
MS.gene035236.t1	MTR_4g117850	55.779	199	83	3	3	196	175	373	1.45e-63	201
MS.gene035236.t1	MTR_4g023080	56.566	198	81	4	6	202	160	353	1.22e-62	198
MS.gene035236.t1	MTR_3g034130	54.787	188	76	3	9	189	177	362	4.68e-62	197
MS.gene035236.t1	MTR_4g118380	56.497	177	66	2	9	176	183	357	1.28e-61	196
MS.gene035236.t1	MTR_6g463430	54.688	192	80	3	14	203	16	202	2.56e-61	190
MS.gene035236.t1	MTR_3g034160	54.726	201	81	4	9	202	177	374	2.99e-61	195
MS.gene035236.t1	MTR_8g433030	57.360	197	76	6	7	199	146	338	3.40e-61	194
MS.gene035236.t1	MTR_8g032390	57.360	197	76	6	7	199	179	371	1.14e-60	194
MS.gene035236.t1	MTR_4g021785	54.822	197	85	3	8	203	162	355	1.57e-60	192
MS.gene035236.t1	MTR_4g023090	50.242	207	86	4	10	202	180	383	1.75e-59	191
MS.gene035236.t1	MTR_8g433040	54.500	200	75	4	7	203	178	364	8.62e-59	189
MS.gene035236.t1	MTR_8g032380	54.500	200	75	4	7	203	178	364	8.62e-59	189
MS.gene035236.t1	MTR_4g118400	53.968	189	73	3	9	197	120	294	1.76e-58	186
MS.gene035236.t1	MTR_4g023380	49.115	226	86	6	2	203	159	379	8.10e-58	186
MS.gene035236.t1	MTR_4g117780	51.613	217	90	3	2	203	151	367	2.85e-57	185
MS.gene035236.t1	MTR_4g117770	52.074	217	89	3	2	203	151	367	7.76e-57	184
MS.gene035236.t1	MTR_4g117810	52.074	217	89	3	2	203	151	367	7.76e-57	184
MS.gene035236.t1	MTR_4g023070	51.220	205	84	4	11	202	168	369	8.82e-57	184
MS.gene035236.t1	MTR_4g023120	50.971	206	85	4	11	203	168	370	2.37e-56	182
MS.gene035236.t1	MTR_5g097210	53.608	194	82	5	9	198	169	358	6.74e-56	181
MS.gene035236.t1	MTR_4g023190	49.296	213	91	6	2	201	149	357	4.55e-52	171
MS.gene035236.t1	MTR_4g117870	48.000	200	68	4	4	203	104	267	1.79e-51	167
MS.gene035236.t1	MTR_5g070080	50.515	194	93	3	12	203	194	386	2.61e-51	170
MS.gene035236.t1	MTR_1g055175	48.205	195	94	5	14	203	9	201	1.43e-50	162
MS.gene035236.t1	MTR_5g070130	47.805	205	97	4	9	203	173	377	1.21e-49	166
MS.gene035236.t1	MTR_4g023150	47.418	213	96	6	2	201	149	358	5.81e-49	163
MS.gene035236.t1	MTR_4g118370	46.429	196	80	5	9	200	83	257	2.90e-48	158
MS.gene035236.t1	MTR_4g023200	46.009	213	99	6	2	201	149	358	4.44e-48	160
MS.gene035236.t1	MTR_7g079400	47.030	202	90	8	14	203	141	337	1.92e-46	156
MS.gene035236.t1	MTR_5g070088	46.316	190	100	2	12	199	192	381	7.12e-46	155
MS.gene035236.t1	MTR_1g055195	47.000	200	92	5	14	203	283	478	7.37e-46	158
MS.gene035236.t1	MTR_4g117750	46.269	201	93	5	9	198	158	354	2.98e-45	156
MS.gene035236.t1	MTR_4g117750	56.061	132	50	1	78	201	350	481	3.32e-40	143
MS.gene035236.t1	MTR_4g116330	44.792	192	65	2	14	203	189	341	3.28e-44	150
MS.gene035236.t1	MTR_8g102520	42.381	210	108	7	2	203	118	322	1.58e-43	148
MS.gene035236.t1	MTR_1g055135	43.478	207	99	7	9	203	175	375	5.13e-43	148
MS.gene035236.t1	MTR_1g055165	50.000	164	79	3	41	203	157	318	6.10e-43	146
MS.gene035236.t1	MTR_4g117530	40.758	211	83	4	2	203	76	253	1.27e-42	144
MS.gene035236.t1	MTR_7g079370	45.146	206	90	11	4	197	156	350	2.10e-41	143
MS.gene035236.t1	MTR_4g122860	41.579	190	80	5	19	203	157	320	1.62e-40	140
MS.gene035236.t1	MTR_4g023440	43.523	193	69	4	11	203	180	332	7.17e-40	139
MS.gene035236.t1	MTR_1g055250	42.632	190	97	6	9	193	73	255	1.07e-37	133
MS.gene035236.t1	MTR_4g118360	56.800	125	44	5	78	197	1	120	1.15e-37	127
MS.gene035236.t1	MTR_8g098830	44.509	173	85	6	6	172	27	194	3.14e-37	129
MS.gene035236.t1	MTR_7g079420	41.081	185	93	7	29	203	966	1144	1.38e-36	135
MS.gene035236.t1	MTR_2g048580	40.201	199	96	8	14	203	158	342	1.64e-36	130
MS.gene035236.t1	MTR_5g023000	60.606	99	39	0	105	203	1	99	1.37e-34	118
MS.gene035236.t1	MTR_4g114700	40.426	188	59	3	12	194	79	218	2.68e-32	117
MS.gene035236.t1	MTR_4g121580	45.455	165	56	6	11	170	183	318	7.82e-31	116
MS.gene035236.t1	MTR_7g079450	46.479	142	67	5	64	203	3	137	1.06e-30	109
MS.gene035236.t1	MTR_8g013010	58.333	96	36	1	7	102	218	309	3.18e-30	113
MS.gene035236.t1	MTR_4g117430	55.789	95	39	2	12	105	63	155	2.27e-25	96.7
MS.gene035236.t1	MTR_4g122840	44.118	136	40	3	69	203	164	264	4.47e-23	93.6
MS.gene035236.t1	MTR_7g117720	59.770	87	31	2	116	198	186	272	3.45e-22	91.3
MS.gene035236.t1	MTR_8g013005	69.492	59	18	0	145	203	1	59	1.77e-21	84.0
MS.gene035236.t1	MTR_4g023430	52.439	82	36	1	125	203	141	222	1.97e-18	80.1
MS.gene035236.t1	MTR_4g116340	53.226	62	29	0	7	68	186	247	2.23e-15	72.4
MS.gene035236.t1	MTR_6g034720	41.333	75	44	0	4	78	94	168	6.80e-13	65.1
MS.gene035236.t1	MTR_2g064960	66.667	42	14	0	162	203	18	59	4.06e-12	59.3
MS.gene035236.t1	MTR_4g109290	62.264	53	20	0	151	203	136	188	7.80e-12	62.0
MS.gene035236.t1	MTR_4g023100	58.929	56	21	1	147	202	65	118	4.15e-11	58.5
MS.gene035236.t1	MTR_2g426020	24.868	189	129	5	13	199	190	367	7.12e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 41 sgRNAs with CRISPR-Local

Find 50 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCCTACATATTGTGATTTA+TGG	0.083398	8.1:-9571249	MS.gene035236:CDS
TATTGTTGCCTTTGATTTAA+TGG	0.144282	8.1:-9571317	MS.gene035236:CDS
TATTGTGATTTATGGGTATT+TGG	0.179333	8.1:-9571241	MS.gene035236:CDS
ATAATACTACAATTGAAATA+TGG	0.246667	8.1:-9571186	MS.gene035236:CDS
TTATCAGAGTCTTTCATATA+AGG	0.262208	8.1:+9571412	None:intergenic
TCTCATTGAGAGATAATAAA+TGG	0.282861	8.1:-9571459	MS.gene035236:CDS
CATAACTCCTTCTATTACTA+TGG	0.288204	8.1:-9570989	MS.gene035236:CDS
TACTCGGTAGTTTCTATGTT+TGG	0.315315	8.1:-9571523	None:intergenic
TCCTACATATTGTGATTTAT+GGG	0.345705	8.1:-9571248	MS.gene035236:CDS
CTCTGTATACATAGCAAATT+CGG	0.366110	8.1:+9570958	None:intergenic
TTGCTCAAGTATAATGATAA+AGG	0.368445	8.1:-9571025	MS.gene035236:CDS
ATTATAGAACAACCCTGCTC+TGG	0.379741	8.1:+9571387	None:intergenic
TATCAGAGTCTTTCATATAA+GGG	0.414042	8.1:+9571413	None:intergenic
TAATACTACAATTGAAATAT+GGG	0.415497	8.1:-9571185	MS.gene035236:CDS
TCCATGGGAATGTCATTAAT+AGG	0.437110	8.1:+9571112	None:intergenic
GACTCTGATAAGCCCAGAGC+AGG	0.444411	8.1:-9571400	MS.gene035236:CDS
TTAAGCTTGCTCACTGGCAC+CGG	0.451608	8.1:+9570919	None:intergenic
TCCACGTCCATAGTAATAGA+AGG	0.458037	8.1:+9570982	None:intergenic
TAATACCGCTGTTCATTGGT+TGG	0.464430	8.1:-9571368	MS.gene035236:CDS
GTGATGAAATATCAGCTAAT+CGG	0.476782	8.1:+9571494	None:intergenic
TCTATAATACCGCTGTTCAT+TGG	0.478155	8.1:-9571372	MS.gene035236:CDS
TTTCATTTCCATTAAATCAA+AGG	0.478785	8.1:+9571309	None:intergenic
TAAAGGGATAAAGTATTCCA+TGG	0.494497	8.1:+9571096	None:intergenic
TAAGCTTGCTCACTGGCACC+GGG	0.497952	8.1:+9570920	None:intergenic
GTGATATTATTGTAACGGAC+GGG	0.507765	8.1:-9571057	MS.gene035236:CDS
AATCACAATATGTAGGATCA+TGG	0.508999	8.1:+9571254	None:intergenic
GAGTCTCTGCTTTCACTCCC+CGG	0.510671	8.1:-9570938	MS.gene035236:CDS
AATACACAGTGCATTCGTCT+TGG	0.518219	8.1:-9571153	MS.gene035236:CDS
TCCTATTAATGACATTCCCA+TGG	0.530486	8.1:-9571113	MS.gene035236:CDS
ATCCTCTTAAGCTTGCTCAC+TGG	0.558265	8.1:+9570913	None:intergenic
TTATAGAACAACCCTGCTCT+GGG	0.560523	8.1:+9571388	None:intergenic
TCCTTCTATTACTATGGACG+TGG	0.563067	8.1:-9570983	MS.gene035236:CDS
ACCCATAAATCACAATATGT+AGG	0.563770	8.1:+9571247	None:intergenic
AAGTGGTGATATTATTGTAA+CGG	0.572882	8.1:-9571062	MS.gene035236:CDS
TGATATTATTGTAACGGACG+GGG	0.588308	8.1:-9571056	MS.gene035236:CDS
AAAGGGATAAAGTATTCCAT+GGG	0.621594	8.1:+9571097	None:intergenic
GGTGATATTATTGTAACGGA+CGG	0.635845	8.1:-9571058	MS.gene035236:CDS
AAGCTTGCTCACTGGCACCG+GGG	0.669724	8.1:+9570921	None:intergenic
GATATTATTGTAACGGACGG+GGG	0.685777	8.1:-9571055	MS.gene035236:CDS
ACTCTGATAAGCCCAGAGCA+GGG	0.688677	8.1:-9571399	MS.gene035236:CDS
AAAAGCCAACCAATGAACAG+CGG	0.744255	8.1:+9571363	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAATACTACAATTGAAATA+TGG	-	chr8.1:9571241-9571260	MS.gene035236:CDS	15.0%
!!	TAATACTACAATTGAAATAT+GGG	-	chr8.1:9571242-9571261	MS.gene035236:CDS	15.0%
!!!	TTTTAATGATGATTTAACAT+TGG	-	chr8.1:9571083-9571102	MS.gene035236:CDS	15.0%
!!	AATAAATGGAGAAAAATTGA+GGG	-	chr8.1:9570982-9571001	MS.gene035236:CDS	20.0%
!!	TAATAAATGGAGAAAAATTG+AGG	-	chr8.1:9570981-9571000	MS.gene035236:CDS	20.0%
!!	TTTCATTTCCATTAAATCAA+AGG	+	chr8.1:9571121-9571140	None:intergenic	20.0%
!	AAGTGGTGATATTATTGTAA+CGG	-	chr8.1:9571365-9571384	MS.gene035236:CDS	25.0%
!	ATCCTACATATTGTGATTTA+TGG	-	chr8.1:9571178-9571197	MS.gene035236:CDS	25.0%
!	TATCAGAGTCTTTCATATAA+GGG	+	chr8.1:9571017-9571036	None:intergenic	25.0%
!	TATTGTGATTTATGGGTATT+TGG	-	chr8.1:9571186-9571205	MS.gene035236:CDS	25.0%
!	TCCTACATATTGTGATTTAT+GGG	-	chr8.1:9571179-9571198	MS.gene035236:CDS	25.0%
!	TCTCATTGAGAGATAATAAA+TGG	-	chr8.1:9570968-9570987	MS.gene035236:CDS	25.0%
!	TTATCAGAGTCTTTCATATA+AGG	+	chr8.1:9571018-9571037	None:intergenic	25.0%
!	TTGCTCAAGTATAATGATAA+AGG	-	chr8.1:9571402-9571421	MS.gene035236:CDS	25.0%
!!	TATTGTTGCCTTTGATTTAA+TGG	-	chr8.1:9571110-9571129	MS.gene035236:CDS	25.0%
	AATCACAATATGTAGGATCA+TGG	+	chr8.1:9571176-9571195	None:intergenic	30.0%
	ACCCATAAATCACAATATGT+AGG	+	chr8.1:9571183-9571202	None:intergenic	30.0%
	CATAACTCCTTCTATTACTA+TGG	-	chr8.1:9571438-9571457	MS.gene035236:CDS	30.0%
	CTCTGTATACATAGCAAATT+CGG	+	chr8.1:9571472-9571491	None:intergenic	30.0%
	GTGATGAAATATCAGCTAAT+CGG	+	chr8.1:9570936-9570955	None:intergenic	30.0%
!	AAAGGGATAAAGTATTCCAT+GGG	+	chr8.1:9571333-9571352	None:intergenic	30.0%
!	TAAAGGGATAAAGTATTCCA+TGG	+	chr8.1:9571334-9571353	None:intergenic	30.0%
!	TGGAGTTTTTCTTAGTCTAT+GGG	-	chr8.1:9571206-9571225	MS.gene035236:CDS	30.0%
!	TTGGAGTTTTTCTTAGTCTA+TGG	-	chr8.1:9571205-9571224	MS.gene035236:CDS	30.0%
!!	CACTTTTTGTTGAGCATAAA+GGG	+	chr8.1:9571350-9571369	None:intergenic	30.0%
	CCTTTATGCTCAACAAAAAG+TGG	-	chr8.1:9571348-9571367	MS.gene035236:CDS	35.0%
	GGATCATGGTAAAAATCATC+CGG	+	chr8.1:9571162-9571181	None:intergenic	35.0%
	TCCATGGGAATGTCATTAAT+AGG	+	chr8.1:9571318-9571337	None:intergenic	35.0%
	TCCTATTAATGACATTCCCA+TGG	-	chr8.1:9571314-9571333	MS.gene035236:CDS	35.0%
	TCTATAATACCGCTGTTCAT+TGG	-	chr8.1:9571055-9571074	MS.gene035236:CDS	35.0%
!	GGTGATATTATTGTAACGGA+CGG	-	chr8.1:9571369-9571388	MS.gene035236:CDS	35.0%
!!	GTGATATTATTGTAACGGAC+GGG	-	chr8.1:9571370-9571389	MS.gene035236:CDS	35.0%
!!	TGATATTATTGTAACGGACG+GGG	-	chr8.1:9571371-9571390	MS.gene035236:CDS	35.0%
!!!	ACTTTTTGAGATGTCTCTTC+CGG	-	chr8.1:9571140-9571159	MS.gene035236:CDS	35.0%
!!!	CCACTTTTTGTTGAGCATAA+AGG	+	chr8.1:9571351-9571370	None:intergenic	35.0%
	AAAAGCCAACCAATGAACAG+CGG	+	chr8.1:9571067-9571086	None:intergenic	40.0%
	AATACACAGTGCATTCGTCT+TGG	-	chr8.1:9571274-9571293	MS.gene035236:CDS	40.0%
	ATTATAGAACAACCCTGCTC+TGG	+	chr8.1:9571043-9571062	None:intergenic	40.0%
	TAATACCGCTGTTCATTGGT+TGG	-	chr8.1:9571059-9571078	MS.gene035236:CDS	40.0%
	TCCACGTCCATAGTAATAGA+AGG	+	chr8.1:9571448-9571467	None:intergenic	40.0%
	TCCTTCTATTACTATGGACG+TGG	-	chr8.1:9571444-9571463	MS.gene035236:CDS	40.0%
	TTATAGAACAACCCTGCTCT+GGG	+	chr8.1:9571042-9571061	None:intergenic	40.0%
!!	GATATTATTGTAACGGACGG+GGG	-	chr8.1:9571372-9571391	MS.gene035236:CDS	40.0%
	ACTCTGATAAGCCCAGAGCA+GGG	-	chr8.1:9571028-9571047	MS.gene035236:CDS	50.0%
!	TTAAGCTTGCTCACTGGCAC+CGG	+	chr8.1:9571511-9571530	None:intergenic	50.0%
	GACTCTGATAAGCCCAGAGC+AGG	-	chr8.1:9571027-9571046	MS.gene035236:CDS	55.0%
	GAGTCTCTGCTTTCACTCCC+CGG	-	chr8.1:9571489-9571508	MS.gene035236:CDS	55.0%
!	TAAGCTTGCTCACTGGCACC+GGG	+	chr8.1:9571510-9571529	None:intergenic	55.0%
!!	ATTGTAACGGACGGGGGTAC+TGG	-	chr8.1:9571378-9571397	MS.gene035236:CDS	55.0%
!	AAGCTTGCTCACTGGCACCG+GGG	+	chr8.1:9571509-9571528	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	9570919	9571530	9570919	ID=MS.gene035236
chr8.1	mRNA	9570919	9571530	9570919	ID=MS.gene035236.t1;Parent=MS.gene035236
chr8.1	exon	9570919	9571530	9570919	ID=MS.gene035236.t1.exon1;Parent=MS.gene035236.t1
chr8.1	CDS	9570919	9571530	9570919	ID=cds.MS.gene035236.t1;Parent=MS.gene035236.t1

Gene Sequence

>MS.gene035236

ATGTTTGGTTATCGCCGATTAGCTGATATTTCATCACGTTTGTATGTTTTCTCATTGAGAGATAATAAATGGAGAAAAATTGAGGGTACTCACTTCCCTTATATGAAAGACTCTGATAAGCCCAGAGCAGGGTTGTTCTATAATACCGCTGTTCATTGGTTGGCTTTTAATGATGATTTAACATTGGTTGTTATTGTTGCCTTTGATTTAATGGAAATGAAACTTTTTGAGATGTCTCTTCCGGATGATTTTTACCATGATCCTACATATTGTGATTTATGGGTATTTGGAGTTTTTCTTAGTCTATGGGCTATTGATAAATATAATACTACAATTGAAATATGGGTGATGAATGAATACACAGTGCATTCGTCTTGGACTAAGTTTCTTGTTCTTCCTATTAATGACATTCCCATGGAATACTTTATCCCTTTATGCTCAACAAAAAGTGGTGATATTATTGTAACGGACGGGGGTACTGGATTGCTCAAGTATAATGATAAAGGACAACTGCTAGAGCATAACTCCTTCTATTACTATGGACGTGGATCCGAATTTGCTATGTATACAGAGTCTCTGCTTTCACTCCCCGGTGCCAGTGAGCAAGCTTAA

Protein sequence

>MS.gene035236.t1

MFGYRRLADISSRLYVFSLRDNKWRKIEGTHFPYMKDSDKPRAGLFYNTAVHWLAFNDDLTLVVIVAFDLMEMKLFEMSLPDDFYHDPTYCDLWVFGVFLSLWAIDKYNTTIEIWVMNEYTVHSSWTKFLVLPINDIPMEYFIPLCSTKSGDIIVTDGGTGLLKYNDKGQLLEHNSFYYYGRGSEFAMYTESLLSLPGASEQA