AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36595


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36595.t1 MTR_8g433040 61.517 356 107 6 3 354 35 364 1.26e-135 391
MS.gene36595.t1 MTR_8g032380 61.517 356 107 6 3 354 35 364 1.26e-135 391
MS.gene36595.t1 MTR_8g032390 60.231 347 99 7 3 346 57 367 7.66e-130 377
MS.gene36595.t1 MTR_4g122850 56.183 372 140 11 2 364 17 374 1.00e-121 357
MS.gene36595.t1 MTR_3g103020 54.821 363 132 11 3 354 37 378 3.94e-115 340
MS.gene36595.t1 MTR_4g094365 54.039 359 139 8 3 354 25 364 1.26e-113 335
MS.gene36595.t1 MTR_4g109270 52.893 363 137 10 3 354 25 364 3.60e-108 322
MS.gene36595.t1 MTR_8g433030 54.179 347 87 8 3 346 57 334 6.54e-108 320
MS.gene36595.t1 MTR_4g021785 52.586 348 135 9 3 346 26 347 6.09e-107 318
MS.gene36595.t1 MTR_4g023080 52.161 347 137 9 3 346 26 346 2.20e-106 317
MS.gene36595.t1 MTR_3g034180 52.162 370 139 13 3 354 140 489 1.02e-105 320
MS.gene36595.t1 MTR_6g060650 51.081 370 144 11 1 353 23 372 9.15e-103 308
MS.gene36595.t1 MTR_3g034130 50.964 363 141 12 3 347 26 369 3.37e-101 304
MS.gene36595.t1 MTR_4g023090 49.861 361 147 10 3 346 33 376 1.07e-100 303
MS.gene36595.t1 MTR_4g023190 48.718 351 149 10 2 346 26 351 2.04e-99 299
MS.gene36595.t1 MTR_3g034160 51.811 359 141 10 3 346 26 367 9.66e-99 298
MS.gene36595.t1 MTR_4g023380 48.285 379 137 10 3 354 33 379 1.00e-98 298
MS.gene36595.t1 MTR_4g023200 48.148 351 152 10 2 346 26 352 3.57e-98 296
MS.gene36595.t1 MTR_4g023150 47.863 351 153 10 2 346 26 352 1.36e-97 294
MS.gene36595.t1 MTR_4g117780 49.587 363 149 12 3 354 28 367 5.10e-97 293
MS.gene36595.t1 MTR_4g118380 50.712 351 131 9 1 327 23 355 3.05e-96 291
MS.gene36595.t1 MTR_4g117850 50.559 358 138 14 3 346 40 372 5.36e-96 291
MS.gene36595.t1 MTR_4g117720 55.814 301 112 8 60 346 76 369 1.27e-95 290
MS.gene36595.t1 MTR_4g023070 47.326 374 156 11 3 356 20 372 2.95e-95 289
MS.gene36595.t1 MTR_4g023120 47.154 369 160 10 3 354 20 370 5.65e-94 285
MS.gene36595.t1 MTR_4g109280 49.041 365 143 11 3 354 25 359 3.11e-93 283
MS.gene36595.t1 MTR_4g023130 47.110 346 115 7 3 346 26 305 5.97e-93 281
MS.gene36595.t1 MTR_4g116330 47.042 355 155 9 3 346 40 372 3.60e-91 279
MS.gene36595.t1 MTR_4g117770 50.138 363 147 12 3 354 28 367 3.46e-90 276
MS.gene36595.t1 MTR_4g117810 50.138 363 147 12 3 354 28 367 3.46e-90 276
MS.gene36595.t1 MTR_5g097210 47.170 371 165 12 3 364 26 374 6.93e-89 273
MS.gene36595.t1 MTR_1g055135 46.866 367 159 15 3 354 30 375 9.36e-87 267
MS.gene36595.t1 MTR_5g070088 44.474 380 166 13 3 354 24 386 1.07e-86 267
MS.gene36595.t1 MTR_5g070080 45.526 380 159 13 3 354 27 386 3.80e-86 266
MS.gene36595.t1 MTR_5g070130 47.368 361 153 12 3 346 28 368 6.07e-86 266
MS.gene36595.t1 MTR_4g121580 46.348 356 133 10 3 344 28 339 1.75e-84 262
MS.gene36595.t1 MTR_4g117750 43.968 373 159 15 3 356 20 361 2.37e-77 246
MS.gene36595.t1 MTR_4g117750 60.577 104 36 3 247 346 373 475 3.27e-28 115
MS.gene36595.t1 MTR_4g023440 44.225 355 138 10 3 354 35 332 2.86e-75 236
MS.gene36595.t1 MTR_8g013010 50.385 260 106 5 3 258 71 311 1.41e-73 231
MS.gene36595.t1 MTR_4g117870 46.284 296 115 9 64 354 11 267 1.54e-72 227
MS.gene36595.t1 MTR_1g055195 47.097 310 118 12 68 360 204 484 1.10e-67 221
MS.gene36595.t1 MTR_4g116330 40.563 355 139 10 3 346 40 333 1.44e-66 214
MS.gene36595.t1 MTR_1g055165 39.833 359 142 9 3 354 27 318 4.22e-65 209
MS.gene36595.t1 MTR_7g079370 41.803 366 166 15 15 356 16 358 1.26e-64 210
MS.gene36595.t1 MTR_4g116320 57.416 209 83 4 143 346 43 250 4.89e-64 205
MS.gene36595.t1 MTR_7g079400 47.970 271 119 11 90 346 67 329 9.44e-63 204
MS.gene36595.t1 MTR_4g118400 43.403 288 118 7 68 346 41 292 4.56e-59 193
MS.gene36595.t1 MTR_6g463430 54.369 206 85 6 154 354 1 202 2.16e-57 186
MS.gene36595.t1 MTR_4g118370 46.559 247 97 8 108 346 33 252 3.13e-56 185
MS.gene36595.t1 MTR_8g040935 52.632 209 90 6 154 354 1 208 4.58e-55 180
MS.gene36595.t1 MTR_8g102520 37.572 346 159 13 20 354 23 322 6.16e-54 181
MS.gene36595.t1 MTR_2g048580 34.986 363 180 14 3 354 25 342 8.83e-50 171
MS.gene36595.t1 MTR_4g116340 43.534 232 82 8 3 222 53 247 2.12e-46 159
MS.gene36595.t1 MTR_1g055250 41.736 242 124 7 132 364 43 276 7.16e-46 160
MS.gene36595.t1 MTR_1g055175 46.193 197 98 4 164 353 5 200 6.75e-44 151
MS.gene36595.t1 MTR_4g117430 52.201 159 60 5 99 256 9 152 3.60e-43 147
MS.gene36595.t1 MTR_4g114700 38.462 286 114 6 96 373 9 240 1.22e-42 149
MS.gene36595.t1 MTR_7g079420 39.394 264 116 9 95 346 905 1136 2.87e-42 158
MS.gene36595.t1 MTR_4g117530 40.408 245 105 5 113 354 47 253 4.04e-42 148
MS.gene36595.t1 MTR_4g122860 44.393 214 77 7 173 374 157 340 5.01e-42 150
MS.gene36595.t1 MTR_7g117720 48.175 137 67 2 57 189 49 185 2.46e-35 130
MS.gene36595.t1 MTR_7g117720 48.980 98 35 4 260 346 176 269 5.09e-15 75.1
MS.gene36595.t1 MTR_8g098830 43.085 188 90 8 150 327 16 196 1.86e-32 122
MS.gene36595.t1 MTR_6g034720 54.701 117 51 2 119 233 53 169 1.70e-30 116
MS.gene36595.t1 MTR_1g097560 29.167 360 204 18 3 348 53 375 1.63e-29 117
MS.gene36595.t1 MTR_5g069120 42.021 188 81 7 2 177 7 178 3.41e-29 111
MS.gene36595.t1 MTR_4g133170 29.697 330 170 15 3 307 21 313 4.93e-29 116
MS.gene36595.t1 MTR_4g107820 27.945 365 214 15 3 348 53 387 6.35e-29 116
MS.gene36595.t1 MTR_4g107780 27.945 365 214 15 3 348 53 387 6.35e-29 116
MS.gene36595.t1 MTR_4g107820 27.945 365 214 15 3 348 53 387 7.16e-29 116
MS.gene36595.t1 MTR_4g107780 27.945 365 214 15 3 348 53 387 7.60e-29 116
MS.gene36595.t1 MTR_8g101580 27.577 359 222 12 3 348 63 396 1.10e-28 115
MS.gene36595.t1 MTR_4g118360 51.562 128 53 4 232 353 1 125 1.56e-28 108
MS.gene36595.t1 MTR_2g021150 29.477 363 220 18 3 350 31 372 1.81e-28 114
MS.gene36595.t1 MTR_5g023000 61.616 99 35 2 259 354 1 99 5.20e-28 105
MS.gene36595.t1 MTR_7g056503 29.223 373 222 17 3 346 38 397 1.17e-27 112
MS.gene36595.t1 MTR_1g097490 28.852 357 211 15 3 347 66 391 2.04e-27 112
MS.gene36595.t1 MTR_3g072470 30.179 391 203 17 3 345 36 404 4.82e-27 111
MS.gene36595.t1 MTR_1g068835 27.174 368 213 13 3 347 21 356 1.80e-26 109
MS.gene36595.t1 MTR_3g006670 30.201 298 169 12 2 286 65 336 6.64e-26 108
MS.gene36595.t1 MTR_5g057690 32.069 290 161 14 3 287 63 321 1.26e-25 107
MS.gene36595.t1 MTR_2g055970 27.198 364 218 14 3 348 228 562 1.48e-25 108
MS.gene36595.t1 MTR_2g426020 27.273 396 232 17 3 364 23 396 3.41e-25 105
MS.gene36595.t1 MTR_4g108820 29.758 289 145 11 3 289 59 291 4.35e-25 104
MS.gene36595.t1 MTR_4g055060 29.452 292 175 10 2 282 46 317 5.12e-25 105
MS.gene36595.t1 MTR_5g011200 29.932 294 176 13 3 287 34 306 6.99e-25 104
MS.gene36595.t1 MTR_3g083640 26.630 368 213 16 2 347 71 403 7.76e-25 105
MS.gene36595.t1 MTR_2g046920 29.392 296 174 10 3 289 41 310 8.94e-25 104
MS.gene36595.t1 MTR_7g407070 28.912 294 188 9 2 282 48 333 9.22e-25 104
MS.gene36595.t1 MTR_3g007360 28.219 365 212 16 2 346 68 402 1.92e-24 103
MS.gene36595.t1 MTR_6g021880 29.268 369 214 15 3 347 37 382 3.01e-24 102
MS.gene36595.t1 MTR_2g046900 27.248 367 219 15 3 347 45 385 3.07e-24 103
MS.gene36595.t1 MTR_1g094210 27.322 366 205 16 3 347 74 399 3.41e-24 103
MS.gene36595.t1 MTR_7g028660 29.063 320 160 12 2 286 27 314 3.79e-24 102
MS.gene36595.t1 MTR_7g013590 30.366 382 199 20 3 347 53 404 4.40e-24 102
MS.gene36595.t1 MTR_4g129190 27.411 394 209 17 3 346 23 389 5.28e-24 102
MS.gene36595.t1 MTR_3g014540 30.795 302 163 15 2 287 45 316 8.49e-24 101
MS.gene36595.t1 MTR_3g030240 27.198 364 206 17 2 347 56 378 1.07e-23 101
MS.gene36595.t1 MTR_7g079450 45.205 146 64 6 216 354 1 137 1.13e-23 95.5
MS.gene36595.t1 MTR_2g026010 28.041 296 181 12 91 361 88 376 1.27e-23 101
MS.gene36595.t1 MTR_8g467140 28.374 289 184 11 3 287 49 318 1.55e-23 100
MS.gene36595.t1 MTR_3g006500 27.869 366 216 16 2 347 33 370 1.98e-23 100
MS.gene36595.t1 MTR_7g057270 29.487 312 176 12 3 286 43 338 2.22e-23 100
MS.gene36595.t1 MTR_5g057790 29.470 302 163 14 3 287 63 331 2.22e-23 100
MS.gene36595.t1 MTR_2g021155 29.730 296 171 10 3 287 53 322 3.57e-23 102
MS.gene36595.t1 MTR_3g007410 29.236 301 175 13 2 291 68 341 3.76e-23 100
MS.gene36595.t1 MTR_5g057020 29.605 304 163 12 3 296 63 325 3.87e-23 99.4
MS.gene36595.t1 MTR_2g021190 27.596 366 216 13 2 347 37 373 4.04e-23 99.8
MS.gene36595.t1 MTR_2g025960 28.247 308 183 12 91 364 3 306 4.59e-23 98.6
MS.gene36595.t1 MTR_7g070830 28.443 334 167 13 3 286 38 349 4.93e-23 100
MS.gene36595.t1 MTR_2g425980 26.515 396 239 15 3 369 22 394 5.31e-23 99.8
MS.gene36595.t1 MTR_5g057710 27.989 368 207 16 3 347 63 395 5.48e-23 99.8
MS.gene36595.t1 MTR_3g009310 29.831 295 171 12 2 286 58 326 5.52e-23 99.8
MS.gene36595.t1 MTR_2g031720 29.677 310 190 13 78 367 79 380 7.32e-23 99.4
MS.gene36595.t1 MTR_3g007330 29.530 298 163 12 2 286 64 327 7.39e-23 99.4
MS.gene36595.t1 MTR_2g024110 26.214 309 205 9 64 352 64 369 7.41e-23 99.0
MS.gene36595.t1 MTR_3g007270 29.097 299 180 12 2 286 63 343 1.03e-22 99.0
MS.gene36595.t1 MTR_3g030250 27.374 358 218 15 2 347 53 380 1.60e-22 98.2
MS.gene36595.t1 MTR_2g043400 28.079 406 202 15 3 346 40 417 1.61e-22 98.6
MS.gene36595.t1 MTR_0044s0300 27.596 366 216 19 2 347 54 390 2.00e-22 97.8
MS.gene36595.t1 MTR_1g068860 28.378 296 182 10 91 366 89 374 2.31e-22 97.4
MS.gene36595.t1 MTR_1g094210 27.405 343 189 15 3 325 74 376 3.56e-22 97.4
MS.gene36595.t1 MTR_1g050542 24.658 365 221 14 3 347 75 405 3.66e-22 97.4
MS.gene36595.t1 MTR_4g061340 29.568 301 169 15 2 286 42 315 7.12e-22 96.3
MS.gene36595.t1 MTR_2g028110 25.459 381 235 15 3 361 21 374 9.18e-22 95.9
MS.gene36595.t1 MTR_7g070880 27.901 362 180 16 3 307 38 375 1.33e-21 95.9
MS.gene36595.t1 MTR_2g028130 25.124 402 255 15 3 369 22 412 1.58e-21 95.5
MS.gene36595.t1 MTR_4g013175 27.747 364 181 16 5 307 29 371 1.63e-21 95.5
MS.gene36595.t1 MTR_3g013740 29.167 312 167 13 2 287 60 343 1.68e-21 95.5
MS.gene36595.t1 MTR_2g047832 27.811 338 188 13 3 307 46 360 1.91e-21 95.5
MS.gene36595.t1 MTR_1g054575 29.110 292 172 11 3 287 69 332 1.97e-21 96.3
MS.gene36595.t1 MTR_3g436150 30.508 295 176 11 2 282 48 327 2.67e-21 94.7
MS.gene36595.t1 MTR_7g056290 29.755 326 175 14 3 292 39 346 3.26e-21 94.7
MS.gene36595.t1 MTR_3g010970 27.322 366 209 17 2 347 64 392 3.46e-21 94.4
MS.gene36595.t1 MTR_7g091640 27.937 315 180 14 2 290 51 344 3.89e-21 94.0
MS.gene36595.t1 MTR_3g083010 27.047 403 241 15 3 364 23 413 4.30e-21 94.4
MS.gene36595.t1 MTR_3g011060 30.693 303 172 15 2 287 44 325 4.54e-21 94.0
MS.gene36595.t1 MTR_3g010520 25.824 364 208 17 2 347 41 360 5.65e-21 93.2
MS.gene36595.t1 MTR_4g109290 41.333 150 46 6 3 152 26 133 6.70e-21 89.7
MS.gene36595.t1 MTR_6g007135 27.807 374 215 16 3 347 43 390 6.72e-21 93.6
MS.gene36595.t1 MTR_1g097330 27.143 350 219 13 3 340 33 358 7.71e-21 93.6
MS.gene36595.t1 MTR_7g091630 25.185 405 223 16 2 347 48 431 7.82e-21 93.6
MS.gene36595.t1 MTR_3g014570 29.605 304 162 14 2 286 45 315 8.90e-21 93.2
MS.gene36595.t1 MTR_2g031680 28.378 296 184 11 90 367 88 373 9.68e-21 93.2
MS.gene36595.t1 MTR_3g023930 26.111 360 211 15 2 347 50 368 1.11e-20 92.8
MS.gene36595.t1 MTR_2g024100 27.114 402 225 17 3 362 24 399 1.13e-20 93.2
MS.gene36595.t1 MTR_5g022420 26.984 315 190 14 3 307 44 328 1.20e-20 92.8
MS.gene36595.t1 MTR_0667s0010 28.947 228 134 9 78 282 80 302 1.52e-20 92.8
MS.gene36595.t1 MTR_4g033495 27.974 311 175 11 3 286 44 332 1.65e-20 92.8
MS.gene36595.t1 MTR_1g442850 31.949 313 147 16 3 282 22 301 1.68e-20 92.0
MS.gene36595.t1 MTR_3g024150 27.348 362 221 15 2 347 51 386 1.77e-20 92.4
MS.gene36595.t1 MTR_0115s0020 23.262 374 251 12 3 346 27 394 1.85e-20 92.4
MS.gene36595.t1 MTR_4g070550 28.295 258 143 12 66 286 63 315 2.02e-20 92.4
MS.gene36595.t1 MTR_5g007610 30.132 302 172 15 2 286 57 336 2.16e-20 92.0
MS.gene36595.t1 MTR_7g055870 27.251 411 216 18 3 346 30 424 2.92e-20 92.0
MS.gene36595.t1 MTR_2g046830 30.000 300 179 12 3 295 42 317 3.52e-20 91.7
MS.gene36595.t1 MTR_8g099460 29.642 307 167 14 75 347 76 367 4.42e-20 91.3
MS.gene36595.t1 MTR_7g056760 28.387 310 176 11 3 284 40 331 4.74e-20 91.3
MS.gene36595.t1 MTR_1g115160 26.648 364 219 15 2 349 38 369 4.77e-20 90.9
MS.gene36595.t1 MTR_3g010390 27.882 373 219 18 2 347 49 398 5.17e-20 90.9
MS.gene36595.t1 MTR_3g007430 27.946 297 175 12 2 286 59 328 5.25e-20 90.9
MS.gene36595.t1 MTR_7g055930 26.699 412 217 18 3 346 30 424 5.98e-20 91.3
MS.gene36595.t1 MTR_3g036430 24.860 358 205 14 3 347 37 343 6.75e-20 90.1
MS.gene36595.t1 MTR_7g066000 27.487 382 222 19 3 348 42 404 9.24e-20 90.5
MS.gene36595.t1 MTR_6g065980 28.962 366 202 20 2 347 32 359 1.01e-19 89.7
MS.gene36595.t1 MTR_0760s0010 28.011 357 217 14 2 347 63 390 1.19e-19 90.1
MS.gene36595.t1 MTR_2g078900 26.910 301 170 13 2 287 49 314 1.30e-19 89.4
MS.gene36595.t1 MTR_2g025420 26.380 326 189 14 81 364 94 410 1.45e-19 90.1
MS.gene36595.t1 MTR_7g061060 27.811 338 186 13 3 307 30 342 1.66e-19 89.7
MS.gene36595.t1 MTR_2g426070 26.142 394 234 15 3 361 23 394 1.67e-19 89.7
MS.gene36595.t1 MTR_2g029990 26.536 358 230 15 2 347 67 403 1.69e-19 89.7
MS.gene36595.t1 MTR_3g013770 29.966 297 176 12 2 287 49 324 1.80e-19 89.4
MS.gene36595.t1 MTR_1g088120 29.379 354 186 16 3 311 27 361 2.03e-19 89.4
MS.gene36595.t1 MTR_1g054725 26.829 369 219 16 2 347 36 376 2.18e-19 89.0
MS.gene36595.t1 MTR_2g043410 26.551 403 212 13 3 346 39 416 2.85e-19 89.0
MS.gene36595.t1 MTR_2g028140 29.091 220 127 9 88 282 102 317 3.71e-19 88.6
MS.gene36595.t1 MTR_2g010900 28.704 324 160 17 4 286 1 294 4.31e-19 88.2
MS.gene36595.t1 MTR_3g036290 29.210 291 165 16 2 286 38 293 4.88e-19 87.8
MS.gene36595.t1 MTR_2g010920 28.107 338 176 17 3 293 37 354 6.34e-19 88.2
MS.gene36595.t1 MTR_0649s0020 29.049 389 202 21 3 346 28 387 7.08e-19 87.8
MS.gene36595.t1 MTR_3g006570 26.954 371 216 18 2 347 37 377 7.24e-19 87.4
MS.gene36595.t1 MTR_2g078850 29.195 298 170 14 2 287 46 314 7.39e-19 87.4
MS.gene36595.t1 MTR_6g053240 26.490 302 182 10 2 287 44 321 8.12e-19 87.4
MS.gene36595.t1 MTR_0464s0020 29.518 332 175 15 3 292 40 354 1.07e-18 87.4
MS.gene36595.t1 MTR_7g055977 27.177 379 193 19 3 337 24 363 1.09e-18 87.0
MS.gene36595.t1 MTR_2g461450 28.620 297 175 11 3 293 35 300 1.23e-18 86.7
MS.gene36595.t1 MTR_2g031640 27.857 280 170 12 91 347 90 360 1.58e-18 86.7
MS.gene36595.t1 MTR_3g011100 27.177 379 216 16 2 347 251 602 1.59e-18 87.4
MS.gene36595.t1 MTR_6g053260 28.188 298 177 11 2 287 353 625 1.92e-18 87.4
MS.gene36595.t1 MTR_7g060960 27.177 379 185 17 3 348 49 369 2.10e-18 85.9
MS.gene36595.t1 MTR_1g068875 25.272 368 235 14 3 355 21 363 2.39e-18 85.9
MS.gene36595.t1 MTR_6g013270 27.540 374 216 20 3 347 46 393 2.44e-18 86.3
MS.gene36595.t1 MTR_2g021210 26.748 329 195 11 3 327 101 387 3.26e-18 85.9
MS.gene36595.t1 MTR_2g047892 28.344 314 160 15 3 282 39 321 3.61e-18 85.5
MS.gene36595.t1 MTR_7g062100 26.923 390 209 17 2 347 40 397 3.68e-18 85.5
MS.gene36595.t1 MTR_2g028160 28.115 313 173 16 92 362 105 407 3.73e-18 85.9
MS.gene36595.t1 MTR_3g010590 26.776 366 214 17 2 347 55 386 3.79e-18 85.5
MS.gene36595.t1 MTR_6g007150 28.966 290 173 13 81 347 59 338 4.11e-18 84.7
MS.gene36595.t1 MTR_6g004660 28.283 297 177 11 3 282 33 310 4.12e-18 85.5
MS.gene36595.t1 MTR_3g464500 25.758 396 207 15 2 346 43 402 4.20e-18 85.5
MS.gene36595.t1 MTR_4g013180 28.997 369 190 19 3 326 28 369 4.99e-18 85.9
MS.gene36595.t1 MTR_6g017280 28.896 308 174 14 3 286 26 312 6.02e-18 84.7
MS.gene36595.t1 MTR_7g077970 29.412 340 166 16 3 293 24 338 6.63e-18 85.1
MS.gene36595.t1 MTR_0242s0060 28.528 326 164 15 3 286 26 324 1.07e-17 84.3
MS.gene36595.t1 MTR_0242s0040 28.528 326 164 15 3 286 26 324 1.07e-17 84.3
MS.gene36595.t1 MTR_7g445890 26.059 307 162 12 2 282 32 299 1.19e-17 84.0
MS.gene36595.t1 MTR_7g066100 27.506 389 214 19 3 346 28 393 1.38e-17 84.0
MS.gene36595.t1 MTR_3g030330 25.706 354 200 15 2 340 36 341 1.97e-17 83.2
MS.gene36595.t1 MTR_2g010950 27.385 325 163 14 3 286 37 329 1.97e-17 83.6
MS.gene36595.t1 MTR_7g061050 27.139 339 186 13 3 307 30 341 2.12e-17 83.2
MS.gene36595.t1 MTR_7g078840 28.746 327 180 14 3 286 27 343 2.25e-17 83.6
MS.gene36595.t1 MTR_2g426060 26.582 316 174 14 91 364 97 396 2.58e-17 83.2
MS.gene36595.t1 MTR_8g062660 26.183 317 165 13 2 287 38 316 2.65e-17 84.0
MS.gene36595.t1 MTR_5g069760 27.987 318 155 15 3 286 23 300 2.74e-17 82.8
MS.gene36595.t1 MTR_5g056020 27.778 324 179 13 7 290 38 346 3.02e-17 83.6
MS.gene36595.t1 MTR_2g046800 27.742 310 187 12 3 287 31 328 3.14e-17 82.8
MS.gene36595.t1 MTR_6g055210 28.660 321 173 14 3 290 39 336 3.27e-17 83.2
MS.gene36595.t1 MTR_7g078040 27.950 322 184 12 3 286 26 337 4.20e-17 82.8
MS.gene36595.t1 MTR_3g030350 27.946 297 163 13 2 282 51 312 4.25e-17 82.4
MS.gene36595.t1 MTR_3g011020 27.070 314 154 12 2 289 44 308 5.36e-17 82.0
MS.gene36595.t1 MTR_3g023940 25.275 364 225 14 2 347 50 384 6.07e-17 82.0
MS.gene36595.t1 MTR_3g437520 29.532 342 165 18 3 292 40 357 6.25e-17 82.4
MS.gene36595.t1 MTR_5g046300 26.117 291 174 13 2 282 20 279 6.63e-17 81.6
MS.gene36595.t1 MTR_5g046290 26.117 291 174 13 2 282 20 279 6.63e-17 81.6
MS.gene36595.t1 MTR_3g009260 28.621 290 164 12 3 282 58 314 6.86e-17 81.6
MS.gene36595.t1 MTR_3g024110 23.919 347 210 14 2 340 117 417 7.79e-17 82.0
MS.gene36595.t1 MTR_3g010620 25.000 388 203 17 2 347 52 393 8.74e-17 81.6
MS.gene36595.t1 MTR_3g080370 26.202 416 215 18 3 354 38 425 9.28e-17 81.6
MS.gene36595.t1 MTR_1g055200 51.136 88 33 4 93 177 6 86 1.12e-16 75.5
MS.gene36595.t1 MTR_4g129160 26.266 316 190 12 3 286 25 329 1.13e-16 80.9
MS.gene36595.t1 MTR_3g010430 26.064 376 214 18 2 347 52 393 1.13e-16 81.3
MS.gene36595.t1 MTR_3g036335 26.984 378 205 18 2 347 57 395 1.17e-16 81.3
MS.gene36595.t1 MTR_5g021860 27.089 347 176 17 3 291 47 374 1.26e-16 81.6
MS.gene36595.t1 MTR_2g021050 24.214 318 177 12 88 368 90 380 1.26e-16 80.9
MS.gene36595.t1 MTR_7g056260 27.796 313 169 14 3 286 31 315 1.28e-16 80.1
MS.gene36595.t1 MTR_7g060940 28.097 331 157 15 3 289 39 332 1.33e-16 80.9
MS.gene36595.t1 MTR_5g021860 27.089 347 176 17 3 291 47 374 1.79e-16 80.9
MS.gene36595.t1 MTR_7g022600 25.553 407 219 18 3 348 40 423 2.01e-16 80.5
MS.gene36595.t1 MTR_5g096710 28.479 309 164 14 3 282 40 320 2.73e-16 80.1
MS.gene36595.t1 MTR_0128s0010 27.759 299 180 12 3 282 38 319 3.32e-16 79.7
MS.gene36595.t1 MTR_5g037680 24.691 324 213 10 3 307 25 336 3.39e-16 80.1
MS.gene36595.t1 MTR_7g056003 27.900 319 167 15 3 286 32 322 4.29e-16 79.7
MS.gene36595.t1 MTR_3g013470 27.815 302 172 13 5 286 14 289 4.84e-16 79.0
MS.gene36595.t1 MTR_7g056710 27.508 309 175 12 3 291 35 314 5.26e-16 79.0
MS.gene36595.t1 MTR_0097s0030 27.541 305 172 11 3 284 31 309 5.43e-16 79.0
MS.gene36595.t1 MTR_2g047240 27.541 305 172 11 3 284 31 309 5.43e-16 79.0
MS.gene36595.t1 MTR_3g010920 24.863 366 212 17 2 347 60 382 6.05e-16 79.0
MS.gene36595.t1 MTR_1g114700 26.810 373 215 16 3 347 46 388 6.40e-16 79.0
MS.gene36595.t1 MTR_0128s0070 26.396 394 210 19 3 354 39 394 6.56e-16 79.0
MS.gene36595.t1 MTR_1g055375 26.954 371 223 19 2 347 20 367 7.25e-16 78.6
MS.gene36595.t1 MTR_0831s0010 27.164 335 188 15 3 307 67 375 1.17e-15 78.2
MS.gene36595.t1 MTR_2g021252 25.862 290 180 11 2 287 63 321 1.20e-15 78.2
MS.gene36595.t1 MTR_7g066030 25.312 320 180 12 3 286 38 334 1.26e-15 78.2
MS.gene36595.t1 MTR_7g070440 27.483 302 177 12 3 284 24 303 1.46e-15 77.8
MS.gene36595.t1 MTR_2g047200 26.299 308 176 13 3 282 37 321 1.54e-15 77.8
MS.gene36595.t1 MTR_7g007300 28.105 306 155 14 2 287 119 379 1.71e-15 77.8
MS.gene36595.t1 MTR_5g046260 23.229 353 190 15 2 347 20 298 1.94e-15 76.6
MS.gene36595.t1 MTR_2g047878 27.128 376 194 16 2 346 37 363 1.99e-15 77.4
MS.gene36595.t1 MTR_4g117550 26.720 378 198 19 3 345 34 367 2.23e-15 77.0
MS.gene36595.t1 MTR_2g021800 24.557 395 231 17 3 346 33 411 2.45e-15 77.4
MS.gene36595.t1 MTR_7g066840 25.490 357 211 14 3 326 40 374 2.45e-15 77.4
MS.gene36595.t1 MTR_4g030830 24.173 393 228 14 3 348 26 395 2.63e-15 77.0
MS.gene36595.t1 MTR_4g037465 26.823 384 219 19 2 348 37 395 2.69e-15 77.0
MS.gene36595.t1 MTR_0054s0090 25.862 290 172 12 92 346 120 401 3.54e-15 76.6
MS.gene36595.t1 MTR_4g030090 25.926 351 190 13 3 307 31 357 4.80e-15 76.3
MS.gene36595.t1 MTR_5g009060 29.412 323 171 16 1 286 40 342 5.51e-15 76.3
MS.gene36595.t1 MTR_7g050520 27.812 320 168 13 3 292 39 325 6.73e-15 75.9
MS.gene36595.t1 MTR_0064s0160 24.516 310 190 9 3 282 59 354 6.75e-15 76.3
MS.gene36595.t1 MTR_7g066060 25.000 388 220 17 6 346 43 406 9.69e-15 75.9
MS.gene36595.t1 MTR_5g057643 27.350 234 129 9 3 222 63 269 1.53e-14 73.6
MS.gene36595.t1 MTR_7g079160 25.474 369 196 15 3 307 25 378 1.92e-14 74.7
MS.gene36595.t1 MTR_7g056820 24.599 374 231 15 3 347 24 375 2.33e-14 74.3
MS.gene36595.t1 MTR_8g046310 26.111 360 229 15 3 345 33 372 2.50e-14 73.9
MS.gene36595.t1 MTR_1g112930 26.190 294 178 13 3 287 42 305 2.57e-14 73.9
MS.gene36595.t1 MTR_6g090180 25.610 328 182 11 3 286 64 373 3.10e-14 73.9
MS.gene36595.t1 MTR_0707s0020 24.402 418 223 19 3 345 43 442 3.35e-14 73.9
MS.gene36595.t1 MTR_8g073550 29.787 188 107 8 2 182 46 215 3.41e-14 72.0
MS.gene36595.t1 MTR_0627s0010 27.795 331 177 17 3 291 55 365 3.64e-14 73.9
MS.gene36595.t1 MTR_5g096630 26.923 260 166 10 3 241 35 291 3.82e-14 73.6
MS.gene36595.t1 MTR_5g027330 26.280 293 186 13 7 282 61 340 4.01e-14 73.9
MS.gene36595.t1 MTR_7g066850 25.633 316 178 13 2 289 39 325 5.33e-14 73.6
MS.gene36595.t1 MTR_5g027370 26.190 294 187 13 7 283 50 330 5.38e-14 73.2
MS.gene36595.t1 MTR_6g014720 26.611 357 202 19 15 347 55 375 8.55e-14 72.4
MS.gene36595.t1 MTR_7g078900 26.042 384 221 16 3 341 29 394 1.04e-13 72.4
MS.gene36595.t1 MTR_2g104340 24.737 380 231 13 3 346 31 391 1.06e-13 72.4
MS.gene36595.t1 MTR_1g055070 26.400 375 199 17 3 347 66 393 1.23e-13 72.0
MS.gene36595.t1 MTR_4g006270 24.920 313 164 14 91 364 87 367 1.55e-13 71.6
MS.gene36595.t1 MTR_0054s0100 24.742 291 174 12 92 345 120 402 1.70e-13 71.6
MS.gene36595.t1 MTR_7g056737 27.564 312 172 14 3 291 39 319 2.14e-13 71.2
MS.gene36595.t1 MTR_5g097330 27.941 272 170 12 93 345 133 397 2.15e-13 71.2
MS.gene36595.t1 MTR_2g040050 24.670 227 132 8 73 282 16 220 2.29e-13 69.7
MS.gene36595.t1 MTR_7g061090 25.714 315 185 13 3 286 39 335 2.52e-13 71.2
MS.gene36595.t1 MTR_2g022000 25.784 287 167 11 94 343 130 407 2.65e-13 71.2
MS.gene36595.t1 MTR_5g048160 21.935 310 201 9 3 282 21 319 3.15e-13 70.9
MS.gene36595.t1 MTR_5g043160 24.620 329 187 15 3 286 67 379 3.16e-13 71.2
MS.gene36595.t1 MTR_7g056717 26.149 348 189 14 3 314 39 354 3.17e-13 70.9
MS.gene36595.t1 MTR_0129s0050 26.897 290 166 11 97 346 120 403 3.18e-13 70.9
MS.gene36595.t1 MTR_7g077070 25.519 337 184 14 1 292 31 345 4.14e-13 70.5
MS.gene36595.t1 MTR_3g030320 25.362 276 175 12 89 348 40 300 4.36e-13 69.7
MS.gene36595.t1 MTR_6g092560 27.273 352 177 17 3 305 29 350 4.41e-13 70.5
MS.gene36595.t1 MTR_7g066080 27.097 310 184 14 3 286 33 326 5.76e-13 70.1
MS.gene36595.t1 MTR_3g058480 26.531 294 161 14 2 274 55 314 6.06e-13 69.3
MS.gene36595.t1 MTR_7g056570 26.774 310 161 12 3 282 35 308 6.22e-13 70.1
MS.gene36595.t1 MTR_7g055987 26.791 321 166 18 3 291 37 320 6.87e-13 69.7
MS.gene36595.t1 MTR_5g068040 27.362 307 164 11 3 286 33 303 9.52e-13 69.3
MS.gene36595.t1 MTR_2g031700 30.405 148 94 5 91 232 89 233 1.02e-12 68.6
MS.gene36595.t1 MTR_5g097350 25.069 363 240 13 3 346 33 382 1.16e-12 68.9
MS.gene36595.t1 MTR_4g122840 38.519 135 46 4 223 354 164 264 1.17e-12 67.8
MS.gene36595.t1 MTR_5g096900 32.184 174 102 7 90 256 125 289 1.40e-12 68.2
MS.gene36595.t1 MTR_8g464770 27.213 305 179 13 5 286 31 315 1.48e-12 68.6
MS.gene36595.t1 MTR_4g008790 26.140 329 165 14 5 284 58 357 1.49e-12 68.9
MS.gene36595.t1 MTR_7g035295 25.325 308 165 13 3 286 33 299 1.68e-12 68.6
MS.gene36595.t1 MTR_4g030980 25.073 343 177 13 3 286 32 353 3.91e-12 67.8
MS.gene36595.t1 MTR_1g055145 44.211 95 44 4 183 273 113 202 4.41e-12 66.2
MS.gene36595.t1 MTR_7g056797 24.359 390 224 17 2 346 39 402 4.85e-12 67.4
MS.gene36595.t1 MTR_3g024040 25.685 292 176 10 2 286 47 304 6.72e-12 66.6
MS.gene36595.t1 MTR_6g046320 26.163 344 185 19 3 293 56 383 8.25e-12 66.6
MS.gene36595.t1 MTR_1g097370 24.581 179 123 5 139 307 135 311 1.14e-11 66.2
MS.gene36595.t1 MTR_3g058440 29.694 229 123 12 1 213 50 256 1.66e-11 65.1
MS.gene36595.t1 MTR_7g017040 24.935 385 222 19 3 345 33 392 1.69e-11 65.5
MS.gene36595.t1 MTR_7g050490 31.606 193 89 7 3 181 25 188 1.71e-11 63.2
MS.gene36595.t1 MTR_0129s0070 24.346 382 225 17 3 345 34 390 2.25e-11 65.1
MS.gene36595.t1 MTR_4g011660 26.316 323 175 15 3 282 36 338 2.62e-11 65.1
MS.gene36595.t1 MTR_1g112010 26.087 322 176 14 8 307 2 283 2.68e-11 64.3
MS.gene36595.t1 MTR_7g052670 25.122 410 218 19 3 350 38 420 3.16e-11 64.7
MS.gene36595.t1 MTR_6g065510 27.193 228 123 10 109 307 76 289 3.27e-11 64.3
MS.gene36595.t1 MTR_5g069390 24.412 340 211 13 3 307 43 371 3.45e-11 65.1
MS.gene36595.t1 MTR_8g064890 25.306 245 153 9 66 290 94 328 3.89e-11 64.3
MS.gene36595.t1 MTR_3g006640 25.256 293 162 12 92 346 19 292 4.03e-11 63.5
MS.gene36595.t1 MTR_5g057040 28.431 204 117 9 3 198 63 245 4.26e-11 65.1
MS.gene36595.t1 MTR_4g130330 24.214 318 196 14 5 290 26 330 5.80e-11 63.9
MS.gene36595.t1 MTR_8g467670 24.167 360 236 12 3 349 31 366 7.33e-11 63.5
MS.gene36595.t1 MTR_4g023430 47.059 85 31 3 280 354 142 222 7.70e-11 62.0
MS.gene36595.t1 MTR_4g102410 24.194 310 206 13 3 286 78 384 8.72e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36595.t1 AT3G06240 26.010 396 212 16 5 348 55 421 4.79e-22 97.4
MS.gene36595.t1 AT3G23880 27.100 369 209 19 3 348 31 362 3.60e-20 91.3
MS.gene36595.t1 AT1G33530 25.743 303 156 15 2 283 113 367 1.97e-17 84.0

Find 79 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTATTCTTGTGAAATTAT+AGG 0.136987 8.4:+76228008 MS.gene36595:CDS
TAAATCATACGCATTTAATT+TGG 0.196256 8.4:-76228132 None:intergenic
GACAATGATCCTGTATCTTA+TGG 0.215985 8.4:+76228467 MS.gene36595:CDS
TCTTATGGTTTGTGGGTATT+TGG 0.244104 8.4:+76228482 MS.gene36595:CDS
GGGGCCTTTCATTGGGTTGC+TGG 0.256777 8.4:+76228359 MS.gene36595:CDS
GTAATAGTAGAGTTGAAATA+TGG 0.261887 8.4:+76228537 MS.gene36595:CDS
TATTGTTGTCTTTGATTTGA+TGG 0.268027 8.4:+76228406 MS.gene36595:CDS
TTACATCATCTATATGGTTT+TGG 0.269284 8.4:+76228152 MS.gene36595:CDS
TTGGAGAATTTCTCAGTCTA+TGG 0.269491 8.4:+76228501 MS.gene36595:CDS
AACTATAAATATCAAGAAAA+TGG 0.283409 8.4:-76228866 None:intergenic
CACCGAATTTGATTGGGATT+TGG 0.287122 8.4:-76227918 None:intergenic
CCTATAATTTCACAAGAATA+AGG 0.288506 8.4:-76228008 None:intergenic
TATGATTTACATCATCTATA+TGG 0.291159 8.4:+76228146 MS.gene36595:CDS
TCTTTAACGGGGCCTTTCAT+TGG 0.300991 8.4:+76228351 MS.gene36595:CDS
AAATGTGATAATGATCTATT+AGG 0.307012 8.4:-76228233 None:intergenic
ATCTATACACCGAATTTGAT+TGG 0.325892 8.4:-76227925 None:intergenic
TAATAGATCATTATCACATT+TGG 0.347743 8.4:+76228235 MS.gene36595:CDS
ATTAGGTAAGGTTTGATCAT+AGG 0.354289 8.4:-76228216 None:intergenic
GATGGAAAGGAAATTGTTAG+AGG 0.375219 8.4:+76228424 MS.gene36595:CDS
AAGTAGGGTTATTCTTTAAC+GGG 0.378283 8.4:+76228339 MS.gene36595:CDS
AAAGTAGGGTTATTCTTTAA+CGG 0.386703 8.4:+76228338 MS.gene36595:CDS
CTTTAACGGGGCCTTTCATT+GGG 0.405882 8.4:+76228352 MS.gene36595:CDS
TGGAGCTGAAGTTCTTGATA+TGG 0.413084 8.4:-76227877 None:intergenic
AACCAAATCCCAATCAAATT+CGG 0.421631 8.4:+76227916 MS.gene36595:CDS
TCCTGTATCTTATGGTTTGT+GGG 0.429538 8.4:+76228475 MS.gene36595:CDS
TGACACAAATAAGAAGAATC+AGG 0.443772 8.4:+76228823 MS.gene36595:CDS
TCTATACACCGAATTTGATT+GGG 0.444800 8.4:-76227924 None:intergenic
TCTCATTGAGAGATAATAAG+TGG 0.449844 8.4:+76228264 MS.gene36595:CDS
ATCCTGTATCTTATGGTTTG+TGG 0.452813 8.4:+76228474 MS.gene36595:CDS
TGGAGAATTTCTCAGTCTAT+GGG 0.460881 8.4:+76228502 MS.gene36595:CDS
GCTGCTGCTGTTGTCAAAGT+AGG 0.463324 8.4:+76228323 MS.gene36595:CDS
GCATTTAATTTGGAAGCAAA+AGG 0.466974 8.4:-76228122 None:intergenic
TTGGTGAAATATAATGATAA+AGG 0.468838 8.4:+76228695 MS.gene36595:CDS
TGAAACAAAATCATGGTTAG+TGG 0.474563 8.4:-76227958 None:intergenic
CCGGTCAACAGATGATTACT+TGG 0.484079 8.4:+76228181 MS.gene36595:CDS
GTACATTTCCACGTCCCTCT+TGG 0.491456 8.4:-76228733 None:intergenic
TGTCTGTGAAATCCAGTAGC+TGG 0.491996 8.4:-76228086 None:intergenic
TACGTATGGAATCCAGCTAC+TGG 0.494188 8.4:+76228074 MS.gene36595:CDS
AGTTGAAATATGGGTGATGA+AGG 0.495178 8.4:+76228547 MS.gene36595:CDS
ACCCACAAACCATAAGATAC+AGG 0.499627 8.4:-76228476 None:intergenic
AGGATCATTGTCAAAATCAT+CGG 0.500576 8.4:-76228456 None:intergenic
GGATCATTGTCAAAATCATC+GGG 0.510836 8.4:-76228455 None:intergenic
CGAAGAATAAAATCATGGTT+GGG 0.512914 8.4:-76227981 None:intergenic
TGATAATGATCTATTAGGTA+AGG 0.515014 8.4:-76228228 None:intergenic
AATACAAACTGCATTCGTCT+TGG 0.516046 8.4:+76228570 MS.gene36595:CDS
AAACTTGCTCGAGGTCAACA+TGG 0.519992 8.4:-76228793 None:intergenic
TAATAGTAGAGTTGAAATAT+GGG 0.527607 8.4:+76228538 MS.gene36595:CDS
GCGAAGAATAAAATCATGGT+TGG 0.528879 8.4:-76227982 None:intergenic
ATTTCTCAGTCTATGGGGCA+TGG 0.529827 8.4:+76228508 MS.gene36595:CDS
TCAAATGTGTTTGTAAGTCA+TGG 0.537159 8.4:+76227769 MS.gene36595:CDS
ACTCTGTATACATGGCCACT+TGG 0.550042 8.4:-76228757 None:intergenic
GTCAACAGATGATTACTTGG+TGG 0.550600 8.4:+76228184 MS.gene36595:CDS
TTGTCTTTGATTTGATGGAA+AGG 0.551425 8.4:+76228411 MS.gene36595:CDS
TTGTCAAAATCATCGGGAAG+AGG 0.552588 8.4:-76228449 None:intergenic
GTTATGCAAACCTCTACGTA+TGG 0.553915 8.4:+76228060 MS.gene36595:CDS
TAATTTCACAAGAATAAGGT+TGG 0.555816 8.4:-76228004 None:intergenic
GTTGGCGAAGAATAAAATCA+TGG 0.561943 8.4:-76227986 None:intergenic
AAGCAAAGACTCTGTATACA+TGG 0.569727 8.4:-76228765 None:intergenic
GGTTGGGTGAAACAAAATCA+TGG 0.572847 8.4:-76227965 None:intergenic
AACTTGCTCGAGGTCAACAT+GGG 0.573047 8.4:-76228792 None:intergenic
CTGCTGCTGTTGTCAAAGTA+GGG 0.575689 8.4:+76228324 MS.gene36595:CDS
TAATAAGTGGAATCAAATTG+AGG 0.581873 8.4:+76228277 MS.gene36595:CDS
TCTAAGAGTATGTGTTGAGG+AGG 0.586763 8.4:-76227841 None:intergenic
TTAGAGTACCAAGAGGGACG+TGG 0.589431 8.4:+76228725 MS.gene36595:CDS
CCAAGTAATCATCTGTTGAC+CGG 0.599991 8.4:-76228181 None:intergenic
ACGACCAGCAACCCAATGAA+AGG 0.601816 8.4:-76228363 None:intergenic
TTGGAAGCAAAAGGAGACAA+AGG 0.603002 8.4:-76228113 None:intergenic
GAAATTATAGGTTCATGCAG+AGG 0.621843 8.4:+76228020 MS.gene36595:CDS
ATTTCTAAGAGTATGTGTTG+AGG 0.632439 8.4:-76227844 None:intergenic
GGAGAATTTCTCAGTCTATG+GGG 0.632883 8.4:+76228503 MS.gene36595:CDS
TAGCTGGATTCCATACGTAG+AGG 0.665580 8.4:-76228070 None:intergenic
ACGTGGAAATGTACGCCAAG+TGG 0.669115 8.4:+76228742 MS.gene36595:CDS
AGTAGGGTTATTCTTTAACG+GGG 0.673335 8.4:+76228340 MS.gene36595:CDS
CAGCTGTTAGAGTACCAAGA+GGG 0.686838 8.4:+76228719 MS.gene36595:CDS
GCATTGAAATAAGTAAAGTG+AGG 0.689440 8.4:-76228302 None:intergenic
CATCTTCATAAACTTGCTCG+AGG 0.702392 8.4:-76228802 None:intergenic
ACAGCTGTTAGAGTACCAAG+AGG 0.710005 8.4:+76228718 MS.gene36595:CDS
TGGTCGTAATGATTTATCAG+TGG 0.716653 8.4:+76228379 MS.gene36595:CDS
ACTTGCTCGAGGTCAACATG+GGG 0.747074 8.4:-76228791 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAAATGTTATAATCAAT+AGG - chr8.4:76228614-76228633 None:intergenic 15.0%
!! TAAATCATACGCATTTAATT+TGG - chr8.4:76228135-76228154 None:intergenic 20.0%
!! TAATAGATCATTATCACATT+TGG + chr8.4:76228235-76228254 MS.gene36595:CDS 20.0%
!! TAATAGTAGAGTTGAAATAT+GGG + chr8.4:76228538-76228557 MS.gene36595:CDS 20.0%
!! TATGATTTACATCATCTATA+TGG + chr8.4:76228146-76228165 MS.gene36595:CDS 20.0%
!! TTGGTGAAATATAATGATAA+AGG + chr8.4:76228695-76228714 MS.gene36595:CDS 20.0%
!!! AAATGTGATAATGATCTATT+AGG - chr8.4:76228236-76228255 None:intergenic 20.0%
! AAAGTAGGGTTATTCTTTAA+CGG + chr8.4:76228338-76228357 MS.gene36595:CDS 25.0%
! ACAAAAAGTGGTGATATTAT+TGG + chr8.4:76228653-76228672 MS.gene36595:CDS 25.0%
! CCTATAATTTCACAAGAATA+AGG - chr8.4:76228011-76228030 None:intergenic 25.0%
! CCTTATTCTTGTGAAATTAT+AGG + chr8.4:76228008-76228027 MS.gene36595:CDS 25.0%
! GTAATAGTAGAGTTGAAATA+TGG + chr8.4:76228537-76228556 MS.gene36595:CDS 25.0%
! TAATAAGTGGAATCAAATTG+AGG + chr8.4:76228277-76228296 MS.gene36595:CDS 25.0%
! TAATTTCACAAGAATAAGGT+TGG - chr8.4:76228007-76228026 None:intergenic 25.0%
!! ACTTTTTGTAGAGTATATTG+GGG - chr8.4:76228642-76228661 None:intergenic 25.0%
!! TGATAATGATCTATTAGGTA+AGG - chr8.4:76228231-76228250 None:intergenic 25.0%
!! TTACATCATCTATATGGTTT+TGG + chr8.4:76228152-76228171 MS.gene36595:CDS 25.0%
!!! ATTTGGTTTTCTTATGTTGA+AGG - chr8.4:76227904-76227923 None:intergenic 25.0%
!!! CACTTTTTGTAGAGTATATT+GGG - chr8.4:76228643-76228662 None:intergenic 25.0%
!!! TATTGTTGTCTTTGATTTGA+TGG + chr8.4:76228406-76228425 MS.gene36595:CDS 25.0%
!!! TTTGGTTTTCTTATGTTGAA+GGG - chr8.4:76227903-76227922 None:intergenic 25.0%
AACCAAATCCCAATCAAATT+CGG + chr8.4:76227916-76227935 MS.gene36595:CDS 30.0%
AAGTAGGGTTATTCTTTAAC+GGG + chr8.4:76228339-76228358 MS.gene36595:CDS 30.0%
AGGATCATTGTCAAAATCAT+CGG - chr8.4:76228459-76228478 None:intergenic 30.0%
ATCTATACACCGAATTTGAT+TGG - chr8.4:76227928-76227947 None:intergenic 30.0%
ATTAGGTAAGGTTTGATCAT+AGG - chr8.4:76228219-76228238 None:intergenic 30.0%
CCAATATACTCTACAAAAAG+TGG + chr8.4:76228641-76228660 MS.gene36595:CDS 30.0%
CGAAGAATAAAATCATGGTT+GGG - chr8.4:76227984-76228003 None:intergenic 30.0%
GCATTGAAATAAGTAAAGTG+AGG - chr8.4:76228305-76228324 None:intergenic 30.0%
TCAAATGTGTTTGTAAGTCA+TGG + chr8.4:76227769-76227788 MS.gene36595:CDS 30.0%
TCTATACACCGAATTTGATT+GGG - chr8.4:76227927-76227946 None:intergenic 30.0%
TCTCATTGAGAGATAATAAG+TGG + chr8.4:76228264-76228283 MS.gene36595:CDS 30.0%
TGAAACAAAATCATGGTTAG+TGG - chr8.4:76227961-76227980 None:intergenic 30.0%
TGACACAAATAAGAAGAATC+AGG + chr8.4:76228823-76228842 MS.gene36595:CDS 30.0%
! AAATGTGATTTTGCAAAGTG+AGG - chr8.4:76227813-76227832 None:intergenic 30.0%
! ATTTCTAAGAGTATGTGTTG+AGG - chr8.4:76227847-76227866 None:intergenic 30.0%
!! GCATTTAATTTGGAAGCAAA+AGG - chr8.4:76228125-76228144 None:intergenic 30.0%
!! TTGTCTTTGATTTGATGGAA+AGG + chr8.4:76228411-76228430 MS.gene36595:CDS 30.0%
!!! CCACTTTTTGTAGAGTATAT+TGG - chr8.4:76228644-76228663 None:intergenic 30.0%
AAGCAAAGACTCTGTATACA+TGG - chr8.4:76228768-76228787 None:intergenic 35.0%
AATACAAACTGCATTCGTCT+TGG + chr8.4:76228570-76228589 MS.gene36595:CDS 35.0%
AGTAGGGTTATTCTTTAACG+GGG + chr8.4:76228340-76228359 MS.gene36595:CDS 35.0%
AGTTGAAATATGGGTGATGA+AGG + chr8.4:76228547-76228566 MS.gene36595:CDS 35.0%
ATCCTGTATCTTATGGTTTG+TGG + chr8.4:76228474-76228493 MS.gene36595:CDS 35.0%
GAAATTATAGGTTCATGCAG+AGG + chr8.4:76228020-76228039 MS.gene36595:CDS 35.0%
GACAATGATCCTGTATCTTA+TGG + chr8.4:76228467-76228486 MS.gene36595:CDS 35.0%
GATGGAAAGGAAATTGTTAG+AGG + chr8.4:76228424-76228443 MS.gene36595:CDS 35.0%
GCGAAGAATAAAATCATGGT+TGG - chr8.4:76227985-76228004 None:intergenic 35.0%
GGATCATTGTCAAAATCATC+GGG - chr8.4:76228458-76228477 None:intergenic 35.0%
GTTGGCGAAGAATAAAATCA+TGG - chr8.4:76227989-76228008 None:intergenic 35.0%
TGGAGAATTTCTCAGTCTAT+GGG + chr8.4:76228502-76228521 MS.gene36595:CDS 35.0%
TGGTCGTAATGATTTATCAG+TGG + chr8.4:76228379-76228398 MS.gene36595:CDS 35.0%
TTGGAGAATTTCTCAGTCTA+TGG + chr8.4:76228501-76228520 MS.gene36595:CDS 35.0%
! TCCTGTATCTTATGGTTTGT+GGG + chr8.4:76228475-76228494 MS.gene36595:CDS 35.0%
! TCTTATGGTTTGTGGGTATT+TGG + chr8.4:76228482-76228501 MS.gene36595:CDS 35.0%
! TGATTTTGCAAAGTGAGGAT+CGG - chr8.4:76227808-76227827 None:intergenic 35.0%
!!! AACTAGTTTTCTCTGTGGAT+TGG + chr8.4:76228676-76228695 MS.gene36595:CDS 35.0%
!!! ATTGGAACTAGTTTTCTCTG+TGG + chr8.4:76228671-76228690 MS.gene36595:CDS 35.0%
!!! TATATGGTTTTGGCTATGAC+CGG + chr8.4:76228162-76228181 MS.gene36595:CDS 35.0%
ACCCACAAACCATAAGATAC+AGG - chr8.4:76228479-76228498 None:intergenic 40.0%
CACCGAATTTGATTGGGATT+TGG - chr8.4:76227921-76227940 None:intergenic 40.0%
CCAAGTAATCATCTGTTGAC+CGG - chr8.4:76228184-76228203 None:intergenic 40.0%
GGAGAATTTCTCAGTCTATG+GGG + chr8.4:76228503-76228522 MS.gene36595:CDS 40.0%
GGTTGGGTGAAACAAAATCA+TGG - chr8.4:76227968-76227987 None:intergenic 40.0%
GTCAACAGATGATTACTTGG+TGG + chr8.4:76228184-76228203 MS.gene36595:CDS 40.0%
GTTATGCAAACCTCTACGTA+TGG + chr8.4:76228060-76228079 MS.gene36595:CDS 40.0%
TGGAGCTGAAGTTCTTGATA+TGG - chr8.4:76227880-76227899 None:intergenic 40.0%
TTGGAAGCAAAAGGAGACAA+AGG - chr8.4:76228116-76228135 None:intergenic 40.0%
TTGTCAAAATCATCGGGAAG+AGG - chr8.4:76228452-76228471 None:intergenic 40.0%
! CATCTTCATAAACTTGCTCG+AGG - chr8.4:76228805-76228824 None:intergenic 40.0%
! GGTTTTCTTATGTTGAAGGG+TGG - chr8.4:76227900-76227919 None:intergenic 40.0%
! TCTAAGAGTATGTGTTGAGG+AGG - chr8.4:76227844-76227863 None:intergenic 40.0%
ACTCTGTATACATGGCCACT+TGG - chr8.4:76228760-76228779 None:intergenic 45.0%
ATTTCTCAGTCTATGGGGCA+TGG + chr8.4:76228508-76228527 MS.gene36595:CDS 45.0%
CCGGTCAACAGATGATTACT+TGG + chr8.4:76228181-76228200 MS.gene36595:CDS 45.0%
CTGCTGCTGTTGTCAAAGTA+GGG + chr8.4:76228324-76228343 MS.gene36595:CDS 45.0%
CTTTAACGGGGCCTTTCATT+GGG + chr8.4:76228352-76228371 MS.gene36595:CDS 45.0%
TACGTATGGAATCCAGCTAC+TGG + chr8.4:76228074-76228093 MS.gene36595:CDS 45.0%
TAGCTGGATTCCATACGTAG+AGG - chr8.4:76228073-76228092 None:intergenic 45.0%
TCTTTAACGGGGCCTTTCAT+TGG + chr8.4:76228351-76228370 MS.gene36595:CDS 45.0%
TGTCTGTGAAATCCAGTAGC+TGG - chr8.4:76228089-76228108 None:intergenic 45.0%
! AAACTTGCTCGAGGTCAACA+TGG - chr8.4:76228796-76228815 None:intergenic 45.0%
! AACTTGCTCGAGGTCAACAT+GGG - chr8.4:76228795-76228814 None:intergenic 45.0%
! ACAGCTGTTAGAGTACCAAG+AGG + chr8.4:76228718-76228737 MS.gene36595:CDS 45.0%
! CAGCTGTTAGAGTACCAAGA+GGG + chr8.4:76228719-76228738 MS.gene36595:CDS 45.0%
ACGACCAGCAACCCAATGAA+AGG - chr8.4:76228366-76228385 None:intergenic 50.0%
ACGTGGAAATGTACGCCAAG+TGG + chr8.4:76228742-76228761 MS.gene36595:CDS 50.0%
ACTTGCTCGAGGTCAACATG+GGG - chr8.4:76228794-76228813 None:intergenic 50.0%
GCTGCTGCTGTTGTCAAAGT+AGG + chr8.4:76228323-76228342 MS.gene36595:CDS 50.0%
GTACATTTCCACGTCCCTCT+TGG - chr8.4:76228736-76228755 None:intergenic 50.0%
! TTAGAGTACCAAGAGGGACG+TGG + chr8.4:76228725-76228744 MS.gene36595:CDS 50.0%
! GGGGCCTTTCATTGGGTTGC+TGG + chr8.4:76228359-76228378 MS.gene36595:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 76227753 76228877 76227753 ID=MS.gene36595
chr8.4 mRNA 76227753 76228877 76227753 ID=MS.gene36595.t1;Parent=MS.gene36595
chr8.4 exon 76227753 76228877 76227753 ID=MS.gene36595.t1.exon1;Parent=MS.gene36595.t1
chr8.4 CDS 76227753 76228877 76227753 ID=cds.MS.gene36595.t1;Parent=MS.gene36595.t1
Gene Sequence

>MS.gene36595

ATGTTTCTTTTACGTGTCAAATGTGTTTGTAAGTCATGGTTTTCTCTTATATCCGATCCTCACTTTGCAAAATCACATTTTGAAGTTTCCTCCTCAACACATACTCTTAGAAATAGAATTATTACCATATCAAGAACTTCAGCTCCACCCTTCAACATAAGAAAACCAAATCCCAATCAAATTCGGTGTATAGATTTTGAAACTTCCACTAACCATGATTTTGTTTCACCCAACCATGATTTTATTCTTCGCCAACCTTATTCTTGTGAAATTATAGGTTCATGCAGAGGTTTTATATGTTTGAACAGTTATGCAAACCTCTACGTATGGAATCCAGCTACTGGATTTCACAGACAAATACCTTTGTCTCCTTTTGCTTCCAAATTAAATGCGTATGATTTACATCATCTATATGGTTTTGGCTATGACCGGTCAACAGATGATTACTTGGTGGTTTTATTGTCCTATGATCAAACCTTACCTAATAGATCATTATCACATTTGGAACTTTTCTCATTGAGAGATAATAAGTGGAATCAAATTGAGGATCCTCACTTTACTTATTTCAATGCTGCTGCTGTTGTCAAAGTAGGGTTATTCTTTAACGGGGCCTTTCATTGGGTTGCTGGTCGTAATGATTTATCAGTGGATGTTATTGTTGTCTTTGATTTGATGGAAAGGAAATTGTTAGAGGTGCCTCTTCCCGATGATTTTGACAATGATCCTGTATCTTATGGTTTGTGGGTATTTGGAGAATTTCTCAGTCTATGGGGCATGGATTTTCGTAATAGTAGAGTTGAAATATGGGTGATGAAGGAATACAAACTGCATTCGTCTTGGACTAAAACTCTTCTAATTCCTATTGATTATAACATTTTTTGCTTTTCCCCAATATACTCTACAAAAAGTGGTGATATTATTGGAACTAGTTTTCTCTGTGGATTGGTGAAATATAATGATAAAGGACAGCTGTTAGAGTACCAAGAGGGACGTGGAAATGTACGCCAAGTGGCCATGTATACAGAGTCTTTGCTTTCACCCCATGTTGACCTCGAGCAAGTTTATGAAGATGACACAAATAAGAAGAATCAGGTTTTGAAATATTCTCATTCACCATTTTCTTGA

Protein sequence

>MS.gene36595.t1

MFLLRVKCVCKSWFSLISDPHFAKSHFEVSSSTHTLRNRIITISRTSAPPFNIRKPNPNQIRCIDFETSTNHDFVSPNHDFILRQPYSCEIIGSCRGFICLNSYANLYVWNPATGFHRQIPLSPFASKLNAYDLHHLYGFGYDRSTDDYLVVLLSYDQTLPNRSLSHLELFSLRDNKWNQIEDPHFTYFNAAAVVKVGLFFNGAFHWVAGRNDLSVDVIVVFDLMERKLLEVPLPDDFDNDPVSYGLWVFGEFLSLWGMDFRNSRVEIWVMKEYKLHSSWTKTLLIPIDYNIFCFSPIYSTKSGDIIGTSFLCGLVKYNDKGQLLEYQEGRGNVRQVAMYTESLLSPHVDLEQVYEDDTNKKNQVLKYSHSPFS