AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041394


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041394.t1 MTR_4g116330 57.180 383 134 11 5 372 13 380 5.90e-137 395
MS.gene041394.t1 MTR_4g116330 52.957 372 128 8 5 372 13 341 1.99e-122 357
MS.gene041394.t1 MTR_3g103020 54.400 375 142 11 13 372 18 378 3.06e-114 337
MS.gene041394.t1 MTR_4g109280 54.032 372 139 13 14 372 7 359 3.83e-108 321
MS.gene041394.t1 MTR_4g023080 51.743 373 146 13 8 369 2 351 2.12e-105 314
MS.gene041394.t1 MTR_3g034180 50.891 393 150 14 5 371 113 488 1.56e-104 317
MS.gene041394.t1 MTR_3g034160 51.938 387 149 13 8 371 2 374 1.25e-103 310
MS.gene041394.t1 MTR_3g034130 51.752 371 138 13 8 351 2 358 5.48e-103 308
MS.gene041394.t1 MTR_4g094365 49.474 380 159 14 9 372 2 364 5.32e-102 306
MS.gene041394.t1 MTR_4g021785 50.535 374 156 10 8 372 2 355 6.44e-102 305
MS.gene041394.t1 MTR_4g117850 50.267 374 149 13 14 369 22 376 1.06e-101 305
MS.gene041394.t1 MTR_4g023130 49.326 371 117 11 8 369 2 310 1.94e-100 300
MS.gene041394.t1 MTR_4g023090 48.092 393 162 14 7 371 7 385 9.98e-98 296
MS.gene041394.t1 MTR_4g117780 48.794 373 160 11 15 372 11 367 1.04e-96 292
MS.gene041394.t1 MTR_6g060650 50.265 378 156 11 14 371 7 372 1.92e-96 292
MS.gene041394.t1 MTR_4g117770 48.429 382 165 11 7 372 2 367 1.11e-95 290
MS.gene041394.t1 MTR_4g117810 48.429 382 165 11 7 372 2 367 1.11e-95 290
MS.gene041394.t1 MTR_4g109270 50.667 375 150 14 15 372 8 364 3.18e-95 288
MS.gene041394.t1 MTR_4g023440 47.619 378 142 11 2 372 4 332 1.28e-94 286
MS.gene041394.t1 MTR_5g070080 46.835 395 165 14 10 372 5 386 4.21e-92 281
MS.gene041394.t1 MTR_4g118380 48.611 360 146 10 14 343 7 357 2.00e-90 276
MS.gene041394.t1 MTR_4g023380 48.010 402 143 13 7 372 8 379 2.50e-90 276
MS.gene041394.t1 MTR_5g070130 46.907 388 167 15 9 372 5 377 3.36e-90 276
MS.gene041394.t1 MTR_5g097210 48.958 384 151 18 8 370 2 361 3.97e-90 276
MS.gene041394.t1 MTR_4g023070 45.876 388 154 13 15 369 3 367 1.38e-88 272
MS.gene041394.t1 MTR_4g117720 45.932 381 142 13 9 372 45 378 4.09e-88 271
MS.gene041394.t1 MTR_1g055135 45.026 382 169 14 14 372 12 375 6.76e-88 270
MS.gene041394.t1 MTR_4g023150 49.215 382 149 16 7 369 2 357 1.23e-86 266
MS.gene041394.t1 MTR_4g023190 49.738 382 146 16 7 369 2 356 3.67e-86 265
MS.gene041394.t1 MTR_4g122850 47.671 365 159 15 27 372 13 364 4.98e-86 265
MS.gene041394.t1 MTR_4g023120 45.758 389 153 14 15 369 3 367 1.29e-85 264
MS.gene041394.t1 MTR_5g070088 42.640 394 179 11 10 369 2 382 6.80e-83 258
MS.gene041394.t1 MTR_8g433040 44.271 384 174 13 3 372 7 364 2.41e-81 253
MS.gene041394.t1 MTR_8g032380 44.271 384 174 13 3 372 7 364 2.41e-81 253
MS.gene041394.t1 MTR_4g117750 47.258 383 147 15 13 368 1 355 7.00e-81 255
MS.gene041394.t1 MTR_4g117750 56.637 113 46 2 258 369 370 480 9.24e-31 122
MS.gene041394.t1 MTR_4g023200 49.215 382 149 16 7 369 2 357 3.20e-80 250
MS.gene041394.t1 MTR_8g032390 44.186 387 152 15 2 367 27 370 9.15e-80 249
MS.gene041394.t1 MTR_4g116320 63.470 219 60 8 167 370 43 256 2.22e-77 239
MS.gene041394.t1 MTR_4g121580 42.931 389 157 17 8 370 2 351 3.76e-73 233
MS.gene041394.t1 MTR_1g055165 39.894 376 155 13 8 372 3 318 1.55e-69 221
MS.gene041394.t1 MTR_4g117870 42.671 307 127 8 75 372 1 267 2.53e-65 208
MS.gene041394.t1 MTR_4g118400 45.946 259 97 6 116 365 69 293 2.80e-65 209
MS.gene041394.t1 MTR_8g013010 46.429 280 130 9 1 269 38 308 6.85e-64 206
MS.gene041394.t1 MTR_7g079370 41.618 346 166 13 44 365 16 349 3.97e-63 206
MS.gene041394.t1 MTR_4g116340 49.600 250 95 7 1 242 21 247 5.58e-63 202
MS.gene041394.t1 MTR_1g055195 42.138 318 139 13 78 372 183 478 4.89e-59 199
MS.gene041394.t1 MTR_4g114700 45.200 250 91 6 118 362 9 217 2.19e-55 182
MS.gene041394.t1 MTR_8g040935 51.010 198 85 5 187 372 11 208 5.28e-54 177
MS.gene041394.t1 MTR_4g118370 44.186 258 93 11 130 369 33 257 5.49e-53 176
MS.gene041394.t1 MTR_2g048580 35.526 380 190 14 9 372 2 342 7.38e-50 171
MS.gene041394.t1 MTR_4g117530 42.739 241 101 7 135 372 47 253 7.10e-48 163
MS.gene041394.t1 MTR_8g433030 46.581 234 104 11 149 367 110 337 1.26e-47 165
MS.gene041394.t1 MTR_8g433030 50.000 100 42 2 2 94 27 125 3.76e-16 79.0
MS.gene041394.t1 MTR_7g079400 38.679 318 158 12 82 372 30 337 5.92e-46 160
MS.gene041394.t1 MTR_6g463430 49.495 198 70 7 189 369 15 199 4.16e-45 154
MS.gene041394.t1 MTR_8g102520 35.751 386 153 19 13 372 6 322 2.50e-44 155
MS.gene041394.t1 MTR_7g117720 35.457 361 139 11 7 365 2 270 2.04e-42 149
MS.gene041394.t1 MTR_1g055250 41.743 218 112 6 162 366 49 264 2.46e-42 150
MS.gene041394.t1 MTR_1g055175 41.706 211 100 8 175 372 1 201 3.20e-38 136
MS.gene041394.t1 MTR_4g118360 55.357 112 47 2 261 372 18 126 3.69e-32 117
MS.gene041394.t1 MTR_5g023000 62.500 96 34 1 277 372 6 99 5.51e-32 116
MS.gene041394.t1 MTR_1g094210 29.716 387 208 17 10 368 52 402 9.96e-32 124
MS.gene041394.t1 MTR_4g117430 47.205 161 64 7 118 269 3 151 1.27e-31 117
MS.gene041394.t1 MTR_8g467140 31.023 303 178 11 13 299 30 317 1.89e-31 122
MS.gene041394.t1 MTR_7g079420 36.630 273 107 13 117 364 905 1136 2.74e-31 125
MS.gene041394.t1 MTR_5g022420 31.544 298 165 12 14 297 26 298 3.23e-31 122
MS.gene041394.t1 MTR_2g055970 27.528 356 226 12 1 338 197 538 8.17e-31 123
MS.gene041394.t1 MTR_2g021150 28.982 383 221 18 14 368 13 372 1.21e-30 120
MS.gene041394.t1 MTR_1g097490 30.645 372 206 13 15 364 49 390 1.76e-30 120
MS.gene041394.t1 MTR_1g094210 29.134 381 210 16 10 364 52 398 1.79e-30 120
MS.gene041394.t1 MTR_4g107820 31.392 309 185 12 10 306 31 324 3.20e-30 119
MS.gene041394.t1 MTR_4g107780 31.392 309 185 12 10 306 31 324 3.20e-30 119
MS.gene041394.t1 MTR_4g107820 31.392 309 185 12 10 306 31 324 4.10e-30 119
MS.gene041394.t1 MTR_4g107780 31.392 309 185 12 10 306 31 324 4.23e-30 119
MS.gene041394.t1 MTR_5g069120 41.758 182 93 5 25 198 1 177 8.12e-29 110
MS.gene041394.t1 MTR_4g109290 39.674 184 72 4 8 190 2 147 8.88e-29 110
MS.gene041394.t1 MTR_4g109290 61.818 55 19 1 318 372 136 188 6.22e-12 64.3
MS.gene041394.t1 MTR_3g007360 28.571 308 182 10 18 305 55 344 1.11e-27 112
MS.gene041394.t1 MTR_3g007410 28.939 311 177 11 18 305 55 344 1.16e-27 112
MS.gene041394.t1 MTR_4g122860 42.703 185 78 7 195 372 157 320 1.41e-27 111
MS.gene041394.t1 MTR_4g133170 28.863 343 187 16 15 327 4 319 2.76e-26 108
MS.gene041394.t1 MTR_2g046920 28.155 309 185 11 14 304 23 312 4.65e-26 107
MS.gene041394.t1 MTR_4g108820 26.667 315 180 9 14 319 41 313 6.81e-26 106
MS.gene041394.t1 MTR_3g083640 28.084 381 210 18 15 364 55 402 8.14e-26 107
MS.gene041394.t1 MTR_1g097330 30.547 311 183 12 15 310 16 308 1.72e-25 107
MS.gene041394.t1 MTR_1g097560 30.321 343 194 16 15 338 36 352 5.52e-25 105
MS.gene041394.t1 MTR_2g047832 25.978 358 190 13 14 321 28 360 6.30e-25 105
MS.gene041394.t1 MTR_2g046900 26.814 317 187 11 14 304 27 324 6.84e-25 104
MS.gene041394.t1 MTR_3g011100 28.732 355 203 14 15 345 235 563 2.00e-24 105
MS.gene041394.t1 MTR_4g023430 74.242 66 16 1 7 72 33 97 2.37e-24 100
MS.gene041394.t1 MTR_4g023430 50.000 82 40 1 292 372 141 222 1.11e-17 81.6
MS.gene041394.t1 MTR_3g009310 30.263 304 174 13 15 299 42 326 3.18e-24 103
MS.gene041394.t1 MTR_0128s0020 27.177 379 219 16 1 335 1 366 3.45e-24 102
MS.gene041394.t1 MTR_3g010520 28.716 296 164 12 15 296 25 287 7.60e-24 101
MS.gene041394.t1 MTR_3g014540 28.814 354 197 15 15 342 29 353 7.85e-24 101
MS.gene041394.t1 MTR_3g014570 30.530 321 171 14 15 308 29 324 8.41e-24 101
MS.gene041394.t1 MTR_4g037465 27.411 394 223 14 2 347 6 384 8.75e-24 102
MS.gene041394.t1 MTR_8g101580 26.247 381 219 16 15 364 45 394 1.12e-23 101
MS.gene041394.t1 MTR_2g046830 28.618 304 190 10 14 304 24 313 1.93e-23 100
MS.gene041394.t1 MTR_3g013770 28.829 333 187 11 2 307 22 331 2.91e-23 100
MS.gene041394.t1 MTR_4g030830 25.600 375 217 11 15 340 9 370 3.03e-23 100
MS.gene041394.t1 MTR_2g426020 27.436 390 228 15 15 366 6 378 3.51e-23 100
MS.gene041394.t1 MTR_2g028160 28.093 388 222 14 15 356 5 381 6.16e-23 99.8
MS.gene041394.t1 MTR_7g407070 30.838 334 166 19 15 305 32 343 6.92e-23 99.4
MS.gene041394.t1 MTR_3g010430 27.864 323 173 12 5 296 26 319 9.90e-23 99.0
MS.gene041394.t1 MTR_7g050520 27.640 322 169 12 12 296 19 313 1.51e-22 98.2
MS.gene041394.t1 MTR_3g013740 28.931 318 174 15 15 299 44 342 1.79e-22 98.2
MS.gene041394.t1 MTR_3g024110 28.620 297 174 14 15 296 101 374 2.71e-22 98.2
MS.gene041394.t1 MTR_3g023930 29.352 293 165 12 15 296 34 295 2.89e-22 97.1
MS.gene041394.t1 MTR_7g066030 26.772 381 220 14 4 337 10 378 3.37e-22 97.4
MS.gene041394.t1 MTR_3g006670 28.254 315 189 13 15 309 49 346 4.21e-22 97.1
MS.gene041394.t1 MTR_7g062100 26.196 397 226 14 15 366 24 398 4.21e-22 97.1
MS.gene041394.t1 MTR_5g057710 29.167 312 167 11 15 299 46 330 4.21e-22 97.1
MS.gene041394.t1 MTR_3g006570 29.870 308 164 14 15 296 21 302 4.41e-22 96.7
MS.gene041394.t1 MTR_5g057690 29.141 326 159 13 15 310 46 329 5.06e-22 96.7
MS.gene041394.t1 MTR_3g024150 28.117 377 212 16 18 364 38 385 5.16e-22 96.7
MS.gene041394.t1 MTR_3g030250 29.900 301 168 14 15 299 37 310 6.43e-22 96.3
MS.gene041394.t1 MTR_0128s0070 26.558 369 207 14 15 342 22 367 6.56e-22 96.7
MS.gene041394.t1 MTR_7g050480 28.261 322 167 14 12 296 19 313 7.24e-22 96.3
MS.gene041394.t1 MTR_3g036430 27.682 289 164 11 15 296 20 270 8.28e-22 95.5
MS.gene041394.t1 MTR_1g068875 27.793 367 217 17 15 356 4 347 1.49e-21 95.1
MS.gene041394.t1 MTR_3g036290 29.180 305 175 15 15 306 22 298 1.64e-21 94.7
MS.gene041394.t1 MTR_0044s0300 29.492 295 179 12 15 296 38 316 1.64e-21 95.1
MS.gene041394.t1 MTR_1g056710 28.021 389 209 17 15 365 34 389 1.81e-21 95.1
MS.gene041394.t1 MTR_7g056503 26.316 380 225 13 4 341 10 376 1.89e-21 95.1
MS.gene041394.t1 MTR_8g464770 25.641 390 228 12 14 365 11 376 1.89e-21 94.7
MS.gene041394.t1 MTR_2g104340 26.585 410 233 16 8 369 7 396 3.05e-21 94.7
MS.gene041394.t1 MTR_5g057790 30.462 325 166 15 15 310 46 339 3.56e-21 94.4
MS.gene041394.t1 MTR_1g088120 27.190 331 184 13 11 297 6 323 5.07e-21 94.0
MS.gene041394.t1 MTR_4g061340 28.571 308 179 12 15 299 26 315 6.32e-21 93.6
MS.gene041394.t1 MTR_6g090180 27.296 392 230 14 1 344 31 415 9.39e-21 93.6
MS.gene041394.t1 MTR_7g055870 25.424 413 210 17 1 333 1 395 1.33e-20 92.8
MS.gene041394.t1 MTR_3g072470 26.869 428 200 18 18 364 22 417 1.51e-20 92.8
MS.gene041394.t1 MTR_6g065980 29.054 296 168 12 15 296 16 283 1.55e-20 92.0
MS.gene041394.t1 MTR_8g098830 40.244 164 80 8 190 339 35 194 1.62e-20 89.7
MS.gene041394.t1 MTR_4g055060 28.616 318 184 14 15 307 30 329 1.68e-20 92.4
MS.gene041394.t1 MTR_7g066100 26.303 403 232 14 12 365 8 394 1.68e-20 92.4
MS.gene041394.t1 MTR_2g021155 28.477 302 183 12 15 299 36 321 1.82e-20 93.6
MS.gene041394.t1 MTR_7g055930 25.182 413 211 16 1 333 1 395 1.86e-20 92.4
MS.gene041394.t1 MTR_7g056820 28.022 364 210 16 15 341 7 355 1.91e-20 92.0
MS.gene041394.t1 MTR_7g078860 25.138 362 222 11 10 331 4 356 1.96e-20 92.0
MS.gene041394.t1 MTR_3g007430 27.124 306 176 13 18 299 46 328 2.75e-20 91.7
MS.gene041394.t1 MTR_2g021770 28.606 409 219 20 18 369 15 407 2.76e-20 92.0
MS.gene041394.t1 MTR_3g030350 27.329 322 203 14 15 321 35 340 3.80e-20 91.3
MS.gene041394.t1 MTR_5g011200 27.273 308 178 13 15 297 17 303 3.96e-20 91.3
MS.gene041394.t1 MTR_3g083010 26.952 397 234 16 15 364 6 393 4.51e-20 91.3
MS.gene041394.t1 MTR_2g028110 28.117 377 206 16 15 356 4 350 4.51e-20 90.9
MS.gene041394.t1 MTR_3g010870 28.758 306 164 15 15 296 37 312 5.24e-20 90.9
MS.gene041394.t1 MTR_1g054575 28.333 300 180 13 15 299 52 331 6.80e-20 91.7
MS.gene041394.t1 MTR_6g004660 26.923 312 182 11 15 296 16 311 8.48e-20 90.1
MS.gene041394.t1 MTR_5g096710 28.060 335 182 11 12 308 20 333 9.99e-20 90.1
MS.gene041394.t1 MTR_7g079450 42.143 140 73 4 237 372 2 137 1.10e-19 84.7
MS.gene041394.t1 MTR_0129s0050 23.923 418 244 15 9 369 8 408 1.23e-19 90.1
MS.gene041394.t1 MTR_1g050542 28.947 304 171 16 15 299 58 335 1.36e-19 89.7
MS.gene041394.t1 MTR_1g115160 27.508 309 167 13 13 297 20 295 1.50e-19 89.4
MS.gene041394.t1 MTR_7g079640 28.647 377 216 19 1 346 1 355 1.71e-19 89.4
MS.gene041394.t1 MTR_3g010390 28.438 320 185 13 15 302 33 340 1.82e-19 89.4
MS.gene041394.t1 MTR_2g034700 25.815 368 227 15 8 353 7 350 2.23e-19 89.0
MS.gene041394.t1 MTR_3g009240 28.289 304 170 14 15 296 36 313 2.67e-19 89.0
MS.gene041394.t1 MTR_3g007330 28.247 308 170 17 15 299 48 327 2.78e-19 89.0
MS.gene041394.t1 MTR_3g010970 29.000 300 165 12 18 299 51 320 3.45e-19 88.6
MS.gene041394.t1 MTR_0760s0010 29.617 287 171 13 20 295 52 318 3.83e-19 88.6
MS.gene041394.t1 MTR_6g053240 26.623 308 182 11 15 296 28 317 3.84e-19 88.6
MS.gene041394.t1 MTR_3g006530 26.879 346 209 14 15 339 40 362 3.96e-19 88.6
MS.gene041394.t1 MTR_3g030240 26.190 294 177 12 15 296 40 305 4.59e-19 88.2
MS.gene041394.t1 MTR_7g055987 27.353 340 182 14 18 319 23 335 5.28e-19 87.8
MS.gene041394.t1 MTR_5g057020 27.245 323 164 13 15 310 46 324 5.33e-19 87.4
MS.gene041394.t1 MTR_7g070880 26.230 366 200 13 15 321 21 375 5.40e-19 88.2
MS.gene041394.t1 MTR_2g425980 26.768 396 218 18 15 363 5 375 5.54e-19 88.2
MS.gene041394.t1 MTR_3g006500 28.125 320 178 16 6 299 7 300 6.76e-19 87.4
MS.gene041394.t1 MTR_3g036335 25.890 309 194 11 15 305 41 332 6.90e-19 87.8
MS.gene041394.t1 MTR_7g057270 26.748 329 195 14 15 306 26 345 6.98e-19 87.8
MS.gene041394.t1 MTR_4g129190 27.824 363 183 17 15 321 6 345 8.41e-19 87.4
MS.gene041394.t1 MTR_4g014370 26.603 421 229 20 9 367 5 407 8.73e-19 87.4
MS.gene041394.t1 MTR_5g069930 26.211 351 201 13 11 321 2 334 1.10e-18 87.0
MS.gene041394.t1 MTR_8g073550 29.464 224 131 7 14 228 29 234 1.13e-18 84.7
MS.gene041394.t1 MTR_6g053260 26.710 307 178 12 15 296 337 621 1.32e-18 87.8
MS.gene041394.t1 MTR_5g096630 25.373 335 202 11 8 299 11 340 1.37e-18 87.0
MS.gene041394.t1 MTR_4g033495 25.628 398 234 17 15 367 27 407 1.38e-18 87.0
MS.gene041394.t1 MTR_7g070830 26.503 366 199 14 15 321 21 375 1.42e-18 87.0
MS.gene041394.t1 MTR_7g056390 27.052 329 171 11 18 297 21 329 1.43e-18 87.0
MS.gene041394.t1 MTR_3g464500 25.984 381 208 15 4 333 16 373 1.53e-18 86.7
MS.gene041394.t1 MTR_4g028660 24.242 396 255 14 7 365 8 395 1.55e-18 86.7
MS.gene041394.t1 MTR_4g027450 24.242 396 255 14 7 365 8 395 1.55e-18 86.7
MS.gene041394.t1 MTR_7g060960 28.896 308 155 13 13 297 30 296 1.55e-18 86.3
MS.gene041394.t1 MTR_4g013180 26.700 397 218 16 11 354 7 383 1.67e-18 87.0
MS.gene041394.t1 MTR_7g056170 24.020 408 199 16 7 340 67 437 1.76e-18 87.0
MS.gene041394.t1 MTR_0667s0010 24.931 361 209 14 15 335 6 344 1.81e-18 86.7
MS.gene041394.t1 MTR_7g062060 24.505 404 239 15 14 365 11 400 1.90e-18 86.3
MS.gene041394.t1 MTR_1g068835 27.487 382 219 18 15 366 4 357 1.91e-18 86.3
MS.gene041394.t1 MTR_1g054725 25.617 324 191 13 2 297 7 308 2.16e-18 85.9
MS.gene041394.t1 MTR_3g009260 27.797 295 174 11 18 296 44 315 2.42e-18 85.9
MS.gene041394.t1 MTR_4g024890 24.190 401 243 13 7 364 2 384 3.10e-18 85.9
MS.gene041394.t1 MTR_3g013950 26.509 381 208 19 12 340 4 364 3.37e-18 85.5
MS.gene041394.t1 MTR_4g030760 25.627 359 230 10 5 340 63 407 3.96e-18 85.9
MS.gene041394.t1 MTR_7g069550 27.041 392 215 19 1 340 1 373 4.62e-18 85.1
MS.gene041394.t1 MTR_6g021880 26.933 375 212 18 27 364 32 381 4.64e-18 85.1
MS.gene041394.t1 MTR_5g069760 25.852 352 190 16 13 321 4 327 5.10e-18 84.7
MS.gene041394.t1 MTR_2g031720 26.415 371 224 16 15 356 6 356 5.22e-18 85.1
MS.gene041394.t1 MTR_7g077970 27.083 336 196 12 15 308 7 335 5.28e-18 85.5
MS.gene041394.t1 MTR_7g056290 25.641 390 198 16 18 335 25 394 6.04e-18 85.1
MS.gene041394.t1 MTR_7g013590 29.180 305 174 11 18 299 39 324 6.69e-18 84.7
MS.gene041394.t1 MTR_2g025420 26.098 410 220 20 15 364 6 392 7.22e-18 84.7
MS.gene041394.t1 MTR_3g464470 25.474 369 208 14 11 333 3 350 8.03e-18 84.3
MS.gene041394.t1 MTR_7g061060 24.859 354 205 14 10 321 8 342 8.17e-18 84.7
MS.gene041394.t1 MTR_5g007610 29.299 314 175 16 15 299 41 336 8.92e-18 84.3
MS.gene041394.t1 MTR_3g010590 26.087 299 174 10 15 296 39 307 8.98e-18 84.3
MS.gene041394.t1 MTR_2g078900 27.687 307 168 13 15 296 33 310 1.19e-17 83.6
MS.gene041394.t1 MTR_3g030310 25.574 305 186 12 15 296 21 307 1.51e-17 83.6
MS.gene041394.t1 MTR_2g043410 25.700 393 203 16 11 339 18 385 1.93e-17 83.6
MS.gene041394.t1 MTR_2g021190 28.247 308 172 13 15 296 21 305 2.06e-17 83.2
MS.gene041394.t1 MTR_0242s0060 28.274 336 188 13 11 304 5 329 2.17e-17 83.6
MS.gene041394.t1 MTR_0242s0040 28.274 336 188 13 11 304 5 329 2.17e-17 83.6
MS.gene041394.t1 MTR_7g061090 25.439 342 186 13 4 296 11 332 2.52e-17 83.2
MS.gene041394.t1 MTR_8g062660 26.935 323 192 11 1 293 1 309 3.49e-17 83.6
MS.gene041394.t1 MTR_0129s0070 26.546 388 238 17 18 369 20 396 3.71e-17 82.8
MS.gene041394.t1 MTR_2g426070 27.913 369 215 16 16 347 7 361 3.81e-17 82.4
MS.gene041394.t1 MTR_2g028140 25.187 401 218 17 15 365 5 373 4.03e-17 82.8
MS.gene041394.t1 MTR_2g024110 25.964 389 232 17 15 369 4 370 4.45e-17 82.0
MS.gene041394.t1 MTR_2g078850 26.490 302 175 13 18 296 33 310 4.51e-17 82.0
MS.gene041394.t1 MTR_1g442850 24.810 395 230 16 14 364 4 375 4.57e-17 82.0
MS.gene041394.t1 MTR_2g021050 24.595 309 181 9 15 299 5 285 5.13e-17 82.0
MS.gene041394.t1 MTR_7g028660 24.590 366 215 12 11 334 7 353 5.32e-17 82.0
MS.gene041394.t1 MTR_2g031680 25.333 375 216 12 15 356 6 349 6.09e-17 82.0
MS.gene041394.t1 MTR_5g096900 28.425 292 171 11 7 268 4 287 6.43e-17 81.3
MS.gene041394.t1 MTR_6g017280 25.568 352 205 15 13 321 7 344 7.34e-17 81.6
MS.gene041394.t1 MTR_3g007300 27.458 295 163 13 15 299 49 302 7.49e-17 81.6
MS.gene041394.t1 MTR_4g130330 26.914 405 232 19 10 367 2 389 7.76e-17 81.6
MS.gene041394.t1 MTR_6g016285 24.874 398 214 13 11 341 17 396 8.89e-17 81.6
MS.gene041394.t1 MTR_5g048160 24.444 405 234 17 15 366 4 389 1.03e-16 81.3
MS.gene041394.t1 MTR_7g070440 25.654 382 214 18 10 345 2 359 1.08e-16 80.9
MS.gene041394.t1 MTR_0064s0160 25.449 334 205 12 14 309 41 368 1.26e-16 81.3
MS.gene041394.t1 MTR_3g030330 29.139 302 166 13 15 296 20 293 1.30e-16 80.9
MS.gene041394.t1 MTR_7g007300 26.733 303 177 14 15 299 103 378 1.37e-16 81.3
MS.gene041394.t1 MTR_2g426060 25.758 396 221 18 15 363 6 375 1.55e-16 80.9
MS.gene041394.t1 MTR_8g467670 25.833 360 226 16 9 341 8 353 1.73e-16 80.5
MS.gene041394.t1 MTR_8g099460 25.849 383 219 16 12 355 2 358 1.77e-16 80.5
MS.gene041394.t1 MTR_1g055375 27.632 304 184 14 18 299 7 296 1.85e-16 80.1
MS.gene041394.t1 MTR_4g117550 24.619 394 233 15 9 369 11 373 2.06e-16 80.1
MS.gene041394.t1 MTR_7g067680 26.599 297 170 12 15 296 49 312 2.32e-16 80.1
MS.gene041394.t1 MTR_7g055977 25.806 403 225 17 12 365 4 381 2.54e-16 80.1
MS.gene041394.t1 MTR_8g039500 26.124 356 206 14 9 329 6 339 2.56e-16 79.7
MS.gene041394.t1 MTR_8g013005 62.903 62 19 2 312 372 1 59 2.57e-16 72.8
MS.gene041394.t1 MTR_4g070550 25.897 390 220 16 15 356 5 373 2.59e-16 80.1
MS.gene041394.t1 MTR_7g017040 26.108 406 228 18 14 369 15 398 2.66e-16 80.1
MS.gene041394.t1 MTR_2g029990 25.763 295 194 11 16 296 52 335 3.18e-16 79.7
MS.gene041394.t1 MTR_4g031770 27.124 306 182 13 15 299 4 289 3.55e-16 79.3
MS.gene041394.t1 MTR_1g055070 26.937 271 168 12 7 255 41 303 4.02e-16 79.3
MS.gene041394.t1 MTR_6g034720 40.146 137 72 5 141 271 53 185 4.42e-16 77.0
MS.gene041394.t1 MTR_7g066850 23.664 393 194 15 15 342 23 374 4.97e-16 79.7
MS.gene041394.t1 MTR_4g013185 27.168 346 181 16 9 297 4 335 5.01e-16 79.3
MS.gene041394.t1 MTR_2g461450 24.022 358 216 12 15 340 18 351 5.45e-16 79.0
MS.gene041394.t1 MTR_7g052150 25.680 331 199 11 2 302 9 322 5.49e-16 79.3
MS.gene041394.t1 MTR_7g091630 23.964 338 209 13 5 306 25 350 5.68e-16 79.3
MS.gene041394.t1 MTR_6g007135 25.879 313 186 13 15 299 26 320 5.83e-16 79.0
MS.gene041394.t1 MTR_0649s0020 25.469 373 208 12 15 342 11 358 6.36e-16 79.0
MS.gene041394.t1 MTR_5g096910 27.035 344 208 13 11 321 13 346 7.38e-16 78.6
MS.gene041394.t1 MTR_4g028750 26.061 330 195 14 8 296 9 330 7.83e-16 78.6
MS.gene041394.t1 MTR_7g060940 24.484 339 197 11 2 302 9 326 8.37e-16 78.6
MS.gene041394.t1 MTR_7g022600 26.000 250 162 7 2 231 7 253 9.04e-16 78.6
MS.gene041394.t1 MTR_5g059430 26.790 433 235 22 2 370 13 427 9.80e-16 78.6
MS.gene041394.t1 MTR_3g007270 25.895 363 213 15 15 340 47 390 9.89e-16 78.6
MS.gene041394.t1 MTR_5g046300 26.599 297 183 13 15 296 4 280 1.04e-15 77.8
MS.gene041394.t1 MTR_5g046290 26.599 297 183 13 15 296 4 280 1.04e-15 77.8
MS.gene041394.t1 MTR_4g055820 25.587 383 193 16 8 329 7 358 1.07e-15 77.8
MS.gene041394.t1 MTR_5g008530 68.519 54 15 1 11 64 14 65 1.09e-15 71.6
MS.gene041394.t1 MTR_3g010920 27.645 293 172 14 15 296 44 307 1.24e-15 77.8
MS.gene041394.t1 MTR_0115s0020 24.051 316 200 11 15 295 10 320 1.28e-15 78.2
MS.gene041394.t1 MTR_0831s0010 27.174 368 205 17 14 340 49 394 1.31e-15 78.2
MS.gene041394.t1 MTR_5g046260 25.784 287 168 12 15 296 4 250 1.32e-15 77.0
MS.gene041394.t1 MTR_7g017130 28.960 404 214 21 15 369 18 397 1.44e-15 77.8
MS.gene041394.t1 MTR_2g021210 26.733 303 188 11 7 296 76 357 1.62e-15 77.8
MS.gene041394.t1 MTR_7g056760 26.205 332 207 13 5 304 13 338 1.98e-15 77.4
MS.gene041394.t1 MTR_5g037680 25.723 346 203 12 14 321 7 336 2.07e-15 77.8
MS.gene041394.t1 MTR_7g056003 24.868 378 208 15 18 339 18 375 2.08e-15 77.4
MS.gene041394.t1 MTR_3g024040 26.333 300 178 12 22 305 38 310 2.29e-15 77.0
MS.gene041394.t1 MTR_4g013175 25.187 401 210 15 11 342 6 385 2.30e-15 77.4
MS.gene041394.t1 MTR_3g010620 27.667 300 166 13 18 299 39 305 2.40e-15 77.0
MS.gene041394.t1 MTR_7g050490 28.846 208 108 8 12 203 5 188 2.40e-15 73.9
MS.gene041394.t1 MTR_6g013270 25.329 304 190 11 15 297 29 316 2.94e-15 77.0
MS.gene041394.t1 MTR_2g047200 27.795 331 178 12 15 304 20 330 3.05e-15 77.0
MS.gene041394.t1 MTR_2g031640 27.056 377 210 18 15 356 6 352 5.09e-15 76.3
MS.gene041394.t1 MTR_7g078840 26.100 341 193 11 11 297 6 341 5.73e-15 76.3
MS.gene041394.t1 MTR_0129s0120 25.714 385 239 17 18 366 20 393 6.44e-15 75.9
MS.gene041394.t1 MTR_6g055210 26.100 341 197 13 4 302 8 335 7.26e-15 75.9
MS.gene041394.t1 MTR_7g017170 29.042 334 169 17 15 299 18 332 7.29e-15 75.9
MS.gene041394.t1 MTR_0097s0030 27.089 347 196 15 11 321 10 335 7.59e-15 75.5
MS.gene041394.t1 MTR_2g047240 27.089 347 196 15 11 321 10 335 7.59e-15 75.5
MS.gene041394.t1 MTR_3g011650 29.493 217 132 7 18 230 82 281 7.83e-15 74.7
MS.gene041394.t1 MTR_2g066170 26.243 362 207 18 9 329 6 348 8.39e-15 75.5
MS.gene041394.t1 MTR_4g129160 24.931 361 203 14 15 318 7 356 8.73e-15 75.1
MS.gene041394.t1 MTR_1g115185 25.667 300 194 13 14 297 38 324 8.77e-15 75.5
MS.gene041394.t1 MTR_6g079810 23.113 424 241 16 6 367 61 461 8.82e-15 75.9
MS.gene041394.t1 MTR_2g022000 26.098 387 207 15 14 335 15 387 8.97e-15 75.9
MS.gene041394.t1 MTR_3g009250 31.222 221 122 10 18 230 44 242 1.08e-14 73.6
MS.gene041394.t1 MTR_1g114700 26.899 316 186 14 15 305 29 324 1.35e-14 74.7
MS.gene041394.t1 MTR_2g026010 29.358 218 117 10 112 299 87 297 1.47e-14 74.7
MS.gene041394.t1 MTR_6g048140 27.434 339 190 16 15 321 39 353 1.71e-14 74.7
MS.gene041394.t1 MTR_3g058480 27.376 263 150 11 15 255 39 282 2.13e-14 73.9
MS.gene041394.t1 MTR_1g071010 25.148 338 190 16 1 297 1 316 2.36e-14 74.3
MS.gene041394.t1 MTR_2g437110 26.471 374 201 22 13 342 20 363 3.80e-14 73.9
MS.gene041394.t1 MTR_0128s0010 25.602 332 190 14 2 295 7 319 3.83e-14 73.6
MS.gene041394.t1 MTR_1g029650 23.333 360 219 13 15 333 8 351 4.11e-14 73.6
MS.gene041394.t1 MTR_0707s0020 24.286 420 230 15 1 340 10 421 4.45e-14 73.6
MS.gene041394.t1 MTR_8g041270 23.515 421 255 16 1 369 1 406 4.84e-14 73.2
MS.gene041394.t1 MTR_8g066440 23.262 374 228 13 16 343 24 384 5.31e-14 73.2
MS.gene041394.t1 MTR_6g092560 24.682 393 212 15 9 341 6 374 6.11e-14 73.2
MS.gene041394.t1 MTR_2g025960 26.104 249 142 10 112 325 2 243 7.19e-14 72.0
MS.gene041394.t1 MTR_7g052670 25.245 408 210 19 6 342 12 395 7.54e-14 72.8
MS.gene041394.t1 MTR_0054s0090 25.307 407 233 18 14 367 16 404 8.14e-14 72.8
MS.gene041394.t1 MTR_5g022045 24.198 343 196 10 2 296 19 345 9.07e-14 72.8
MS.gene041394.t1 MTR_7g066840 24.302 358 211 13 6 321 14 353 9.99e-14 72.4
MS.gene041394.t1 MTR_7g066010 23.698 384 194 16 10 342 16 351 1.24e-13 72.0
MS.gene041394.t1 MTR_7g077070 23.251 443 231 19 11 372 12 426 1.26e-13 72.0
MS.gene041394.t1 MTR_7g037670 27.170 265 153 11 5 255 13 251 1.32e-13 71.6
MS.gene041394.t1 MTR_5g022090 25.228 329 169 10 2 296 18 303 1.35e-13 72.0
MS.gene041394.t1 MTR_8g046310 26.471 306 189 11 18 299 19 312 1.48e-13 71.6
MS.gene041394.t1 MTR_1g055145 53.086 81 32 3 27 107 45 119 1.56e-13 70.9
MS.gene041394.t1 MTR_4g030110 23.177 384 206 12 11 340 26 374 1.89e-13 71.2
MS.gene041394.t1 MTR_7g016930 26.480 321 176 14 9 295 10 304 2.36e-13 70.9
MS.gene041394.t1 MTR_5g023570 37.288 118 59 3 14 128 36 141 2.55e-13 67.4
MS.gene041394.t1 MTR_1g050308 24.802 379 208 14 9 369 28 347 2.74e-13 70.5
MS.gene041394.t1 MTR_6g034830 34.884 129 60 3 1 124 3 112 3.40e-13 66.2
MS.gene041394.t1 MTR_5g097680 23.810 357 206 11 8 299 10 365 4.26e-13 70.5
MS.gene041394.t1 MTR_2g047878 27.105 380 236 16 2 364 8 363 4.43e-13 70.1
MS.gene041394.t1 MTR_2g047892 22.454 383 229 13 4 339 11 372 7.21e-13 69.7
MS.gene041394.t1 MTR_5g027330 23.438 320 206 12 19 308 44 354 8.57e-13 69.7
MS.gene041394.t1 MTR_1g055200 40.816 98 45 4 116 208 7 96 9.06e-13 64.3
MS.gene041394.t1 MTR_2g065840 23.869 398 254 15 6 367 3 387 9.69e-13 69.3
MS.gene041394.t1 MTR_5g027370 23.438 320 206 12 19 308 33 343 1.10e-12 69.3
MS.gene041394.t1 MTR_3g010870 28.821 229 122 10 15 229 37 238 1.22e-12 68.6
MS.gene041394.t1 MTR_8g064890 25.312 320 202 13 7 296 8 320 1.26e-12 68.9
MS.gene041394.t1 MTR_0054s0100 24.694 409 235 18 14 367 16 406 1.54e-12 68.9
MS.gene041394.t1 MTR_6g086825 25.182 413 249 16 5 369 60 460 1.65e-12 68.9
MS.gene041394.t1 MTR_2g104280 25.971 412 230 18 14 369 13 405 1.98e-12 68.6
MS.gene041394.t1 MTR_7g078050 32.026 153 70 5 11 148 2 135 2.00e-12 67.0
MS.gene041394.t1 MTR_1g037540 24.551 334 184 14 18 296 8 328 2.02e-12 68.6
MS.gene041394.t1 MTR_4g019990 25.444 338 196 12 14 312 5 325 2.16e-12 68.2
MS.gene041394.t1 MTR_7g066080 26.769 325 186 16 11 296 12 323 2.47e-12 68.2
MS.gene041394.t1 MTR_5g057643 30.508 236 122 10 15 232 46 257 2.65e-12 67.0
MS.gene041394.t1 MTR_7g056200 21.408 355 197 10 11 321 19 335 3.28e-12 67.8
MS.gene041394.t1 MTR_5g056020 24.272 412 228 17 1 341 1 399 3.52e-12 67.8
MS.gene041394.t1 MTR_5g072060 26.611 357 216 14 14 340 5 345 3.61e-12 68.2
MS.gene041394.t1 MTR_7g077990 23.977 342 181 11 1 295 3 312 3.99e-12 67.4
MS.gene041394.t1 MTR_5g057040 30.622 209 106 8 15 206 46 232 4.21e-12 68.2
MS.gene041394.t1 MTR_7g061010 26.032 315 188 10 11 297 18 315 4.91e-12 67.0
MS.gene041394.t1 MTR_0128s0130 61.111 54 20 1 15 67 25 78 7.43e-12 61.2
MS.gene041394.t1 MTR_2g066150 25.126 398 218 19 9 369 6 360 7.74e-12 66.2
MS.gene041394.t1 MTR_3g096280 24.913 289 176 13 27 303 17 276 8.11e-12 66.2
MS.gene041394.t1 MTR_1g112930 25.581 301 189 12 15 301 25 304 8.34e-12 66.2
MS.gene041394.t1 MTR_4g011660 21.951 369 219 15 12 321 16 374 9.17e-12 66.2
MS.gene041394.t1 MTR_3g023940 24.869 382 223 17 15 364 34 383 1.16e-11 65.9
MS.gene041394.t1 MTR_3g030320 29.319 191 117 10 114 296 44 224 1.78e-11 64.7
MS.gene041394.t1 MTR_5g074800 28.112 249 133 10 128 340 80 318 1.87e-11 65.1
MS.gene041394.t1 MTR_6g017270 22.563 359 191 13 15 342 9 311 2.10e-11 65.1
MS.gene041394.t1 MTR_7g056737 26.061 330 178 12 13 304 20 321 2.43e-11 65.1
MS.gene041394.t1 MTR_3g096250 26.630 368 183 16 15 364 47 345 3.01e-11 64.3
MS.gene041394.t1 MTR_3g058470 24.342 304 168 11 15 296 37 300 3.17e-11 64.7
MS.gene041394.t1 MTR_7g055850 29.858 211 103 9 1 177 1 200 3.24e-11 63.9
MS.gene041394.t1 MTR_5g024260 27.027 259 158 10 7 244 14 262 3.78e-11 64.7
MS.gene041394.t1 MTR_8g063310 23.645 406 241 18 6 366 13 394 4.38e-11 64.3
MS.gene041394.t1 MTR_2g021950 23.393 389 243 16 18 365 19 393 4.42e-11 64.3
MS.gene041394.t1 MTR_4g023100 56.897 58 21 2 314 371 65 118 5.75e-11 59.7
MS.gene041394.t1 MTR_3g080370 22.365 389 197 12 29 340 35 395 7.42e-11 63.5
MS.gene041394.t1 MTR_4g030090 23.545 378 221 12 16 340 15 377 9.57e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041394.t1 AT3G06240 25.272 368 217 15 12 332 33 389 9.97e-26 107
MS.gene041394.t1 AT3G23880 29.836 305 173 14 15 297 14 299 2.45e-18 85.9
MS.gene041394.t1 AT4G22390 27.919 394 223 21 16 372 5 374 2.95e-18 85.9
MS.gene041394.t1 AT4G22390 27.919 394 223 21 16 372 5 374 3.19e-18 85.9
MS.gene041394.t1 AT3G16210 27.425 299 171 13 14 299 4 269 4.45e-17 82.0
MS.gene041394.t1 AT1G12870 23.352 364 223 16 15 342 33 376 7.63e-14 72.8
MS.gene041394.t1 AT4G19940 24.615 390 234 16 15 358 35 410 9.66e-14 72.4
MS.gene041394.t1 AT3G49980 23.052 308 207 9 12 301 2 297 1.49e-13 71.6
MS.gene041394.t1 AT3G49980 23.052 308 207 9 12 301 3 298 1.79e-13 71.6
MS.gene041394.t1 AT1G11620 23.560 382 244 15 11 367 2 360 2.58e-13 70.9
MS.gene041394.t1 AT2G40910 25.316 316 204 12 7 300 61 366 5.77e-13 70.1
MS.gene041394.t1 AT2G40910 25.316 316 204 12 7 300 54 359 6.04e-13 70.1
MS.gene041394.t1 AT3G10430 25.214 234 152 9 15 243 5 220 4.31e-12 67.4
MS.gene041394.t1 AT2G16810 26.104 249 165 9 14 255 40 276 7.38e-12 65.9
MS.gene041394.t1 AT3G52320 26.506 249 162 9 15 256 27 261 1.07e-11 66.2
MS.gene041394.t1 AT2G40925 25.153 326 196 13 1 300 19 322 3.10e-11 64.7
MS.gene041394.t1 AT1G50870 23.826 298 192 10 9 290 25 303 3.28e-11 64.7
MS.gene041394.t1 AT5G62660 25.249 301 198 10 15 297 41 332 3.39e-11 64.7
MS.gene041394.t1 AT1G19160 26.014 296 177 14 15 296 2 269 4.71e-11 63.9
MS.gene041394.t1 AT3G51171 26.522 230 136 9 15 231 4 213 7.04e-11 62.4
MS.gene041394.t1 AT2G27520 23.653 334 197 13 13 326 4 299 7.26e-11 63.5

Find 66 sgRNAs with CRISPR-Local

Find 83 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTAGAGCATAACTCATTT+TGG 0.118675 8.2:+12710847 MS.gene041394:CDS
TATTATTGCATTTGATTTAA+TGG 0.155060 8.2:+12710548 MS.gene041394:CDS
GCAAGTTATTTGTGGGTATT+TGG 0.161094 8.2:+12710606 MS.gene041394:CDS
CGCATATTATAATACATATA+AGG 0.212962 8.2:-12710459 None:intergenic
TTTGATGGGTCACTCTTTAA+TGG 0.231958 8.2:+12710486 MS.gene041394:CDS
TGATCATTCAAATATTATTA+TGG 0.240593 8.2:+12709890 MS.gene041394:CDS
CACTTTCTGTAGAGCATATT+GGG 0.261064 8.2:-12710764 None:intergenic
GTTATTCATTGGTTGACTTT+TGG 0.268375 8.2:+12710510 MS.gene041394:CDS
ACAGAAAGTGGTGACATTAT+TGG 0.270370 8.2:+12710777 MS.gene041394:CDS
AAAATATGAATTTGCAAAGT+TGG 0.273352 8.2:-12709980 None:intergenic
AGGAGGATATAGTTGAGATA+TGG 0.282271 8.2:+12710658 MS.gene041394:CDS
ATTATTGCATTTGATTTAAT+GGG 0.299436 8.2:+12710549 MS.gene041394:CDS
TCAAATATTATTATGGTTAC+CGG 0.301410 8.2:+12709897 MS.gene041394:CDS
GTTCTTGTTCTTCGTGTTGA+TGG 0.307283 8.2:+12710720 MS.gene041394:CDS
TATAATATGCGTAGCTTTGA+TGG 0.312506 8.2:+12710471 MS.gene041394:CDS
TTGATGGGTCACTCTTTAAT+GGG 0.316031 8.2:+12710487 MS.gene041394:CDS
CCACTTTCTGTAGAGCATAT+TGG 0.323473 8.2:-12710765 None:intergenic
TCTTTAATGGGGTTATTCAT+TGG 0.352748 8.2:+12710499 MS.gene041394:CDS
ATCAAATGTAATAGCGTCAT+TGG 0.368312 8.2:-12710280 None:intergenic
AAATATGAATTTGCAAAGTT+GGG 0.374978 8.2:-12709979 None:intergenic
TGTGCATTCGTCTTGGACTA+AGG 0.384447 8.2:+12710698 MS.gene041394:CDS
ATAGCGTCATTGGAATAATT+AGG 0.385280 8.2:-12710270 None:intergenic
CACAAATAACTTGCTGGAAA+AGG 0.400503 8.2:-12710597 None:intergenic
GGAGGATATAGTTGAGATAT+GGG 0.407950 8.2:+12710659 MS.gene041394:CDS
AATACCCACAAATAACTTGC+TGG 0.410672 8.2:-12710603 None:intergenic
ATGATCATTTGATCATCAAT+TGG 0.425885 8.2:-12710882 None:intergenic
TCAAAGGCGTTTGTAAGTCT+TGG 0.437213 8.2:+12709938 MS.gene041394:CDS
GAGTCTCTGCTCTCACTCTC+TGG 0.442999 8.2:+12710912 MS.gene041394:CDS
AGATAATACATGGAAAGAAC+TGG 0.443417 8.2:+12710422 MS.gene041394:CDS
GCATATTATAATACATATAA+GGG 0.452908 8.2:-12710458 None:intergenic
CATTTGATCATCAATTGGTC+CGG 0.475346 8.2:-12710877 None:intergenic
CCAATATGCTCTACAGAAAG+TGG 0.475457 8.2:+12710765 MS.gene041394:CDS
AATACAATGTGCATTCGTCT+TGG 0.497447 8.2:+12710691 MS.gene041394:CDS
CAATCGCAGAGGAGAGGAGA+AGG 0.503821 8.2:+12709840 MS.gene041394:CDS
GGATGCATAAAATTAGGTCT+TGG 0.513915 8.2:-12710132 None:intergenic
GTTAAGAGATGATTACGTGC+TGG 0.520359 8.2:+12710338 MS.gene041394:CDS
AAGTCTCTTATTCGTTTCAA+AGG 0.522845 8.2:+12709922 MS.gene041394:CDS
TATAATTGCAGTACCACAAG+GGG 0.526238 8.2:-12710154 None:intergenic
CAATTATAAGTTCGTGTAGA+GGG 0.528114 8.2:+12710169 MS.gene041394:CDS
TCTCATTGAGAGATAATACA+TGG 0.531728 8.2:+12710412 MS.gene041394:CDS
TTCTCAGTGGATACACTAGT+AGG 0.549872 8.2:+12710634 MS.gene041394:CDS
ATAATATGCGTAGCTTTGAT+GGG 0.553129 8.2:+12710472 MS.gene041394:CDS
TGATGGGTCACTCTTTAATG+GGG 0.565924 8.2:+12710488 MS.gene041394:CDS
TACCTATGGAATCCATCCAC+TGG 0.568985 8.2:+12710222 MS.gene041394:CDS
GACTTCACAAACAAATACCT+TGG 0.570262 8.2:+12710244 MS.gene041394:CDS
CAGAAACACTACCACTGTCA+AGG 0.575801 8.2:-12710104 None:intergenic
CTTATAATTGCAGTACCACA+AGG 0.583541 8.2:-12710156 None:intergenic
GCAATTATAAGTTCGTGTAG+AGG 0.584780 8.2:+12710168 MS.gene041394:CDS
TGTTTGTGAAGTCCAGTGGA+TGG 0.596613 8.2:-12710234 None:intergenic
AGAAACACTACCACTGTCAA+GGG 0.598253 8.2:-12710103 None:intergenic
TATTTGTTTGTGAAGTCCAG+TGG 0.609460 8.2:-12710238 None:intergenic
CAGTGGATACACTAGTAGGA+AGG 0.612659 8.2:+12710638 MS.gene041394:CDS
AAACGAATAAGAGACTTCAC+CGG 0.618356 8.2:-12709916 None:intergenic
GGTGACATTATTGGAACAGA+TGG 0.620272 8.2:+12710786 MS.gene041394:CDS
GATGAACAATCGCAGAGGAG+AGG 0.621207 8.2:+12709834 None:intergenic
GTATTTGGAGACTTTCTCAG+TGG 0.646304 8.2:+12710621 MS.gene041394:CDS
TTGGAATAATTAGGAGACCA+AGG 0.646810 8.2:-12710261 None:intergenic
TTGTTCAAGTATAATGACAA+AGG 0.652471 8.2:+12710819 MS.gene041394:CDS
GTCCAGTGGATGGATTCCAT+AGG 0.656440 8.2:-12710224 None:intergenic
TGGATACACTAGTAGGAAGG+AGG 0.660643 8.2:+12710641 MS.gene041394:CDS
ATTTGAATGATCAAATCATG+AGG 0.675706 8.2:-12709880 None:intergenic
CGTAAAGCATCCCTTGACAG+TGG 0.694231 8.2:+12710093 MS.gene041394:CDS
TTATAATTGCAGTACCACAA+GGG 0.711887 8.2:-12710155 None:intergenic
ACGAAGATGAACAATCGCAG+AGG 0.712372 8.2:+12709829 None:intergenic
TCTACTACAAGTGTGTGTTG+CGG 0.726934 8.2:-12710013 None:intergenic
ATAATTGCAGTACCACAAGG+GGG 0.811565 8.2:-12710153 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GCATATTATAATACATATAA+GGG - chr8.2:12710461-12710480 None:intergenic 15.0%
!! TGATCATTCAAATATTATTA+TGG + chr8.2:12709890-12709909 MS.gene041394:CDS 15.0%
!!! ACTTTAAAAAATTATACCTA+TGG + chr8.2:12710208-12710227 MS.gene041394:CDS 15.0%
!!! ATTATTGCATTTGATTTAAT+GGG + chr8.2:12710549-12710568 MS.gene041394:CDS 15.0%
!!! TATTATTGCATTTGATTTAA+TGG + chr8.2:12710548-12710567 MS.gene041394:CDS 15.0%
!! AAAATATGAATTTGCAAAGT+TGG - chr8.2:12709983-12710002 None:intergenic 20.0%
!! AAATATGAATTTGCAAAGTT+GGG - chr8.2:12709982-12710001 None:intergenic 20.0%
!! CGCATATTATAATACATATA+AGG - chr8.2:12710462-12710481 None:intergenic 20.0%
!! TCAAATATTATTATGGTTAC+CGG + chr8.2:12709897-12709916 MS.gene041394:CDS 20.0%
! ATGATCATTTGATCATCAAT+TGG - chr8.2:12710885-12710904 None:intergenic 25.0%
! ATTGGGAAAAAGAATTTAGA+AGG - chr8.2:12710750-12710769 None:intergenic 25.0%
! ATTTGAATGATCAAATCATG+AGG - chr8.2:12709883-12709902 None:intergenic 25.0%
! TTGTTCAAGTATAATGACAA+AGG + chr8.2:12710819-12710838 MS.gene041394:CDS 25.0%
!!! ACCATTTTTGTTTTGGATTT+GGG + chr8.2:12710307-12710326 MS.gene041394:CDS 25.0%
!!! GATGATTACCATTTTTGTTT+TGG + chr8.2:12710300-12710319 MS.gene041394:CDS 25.0%
!!! TACCATTTTTGTTTTGGATT+TGG + chr8.2:12710306-12710325 MS.gene041394:CDS 25.0%
AAGTCTCTTATTCGTTTCAA+AGG + chr8.2:12709922-12709941 MS.gene041394:CDS 30.0%
ACCCAAATCCAAAACAAAAA+TGG - chr8.2:12710311-12710330 None:intergenic 30.0%
AGATAATACATGGAAAGAAC+TGG + chr8.2:12710422-12710441 MS.gene041394:CDS 30.0%
ATAGCGTCATTGGAATAATT+AGG - chr8.2:12710273-12710292 None:intergenic 30.0%
ATCAAATGTAATAGCGTCAT+TGG - chr8.2:12710283-12710302 None:intergenic 30.0%
CAATTATAAGTTCGTGTAGA+GGG + chr8.2:12710169-12710188 MS.gene041394:CDS 30.0%
TCAATGAGAAAAACTCCAAA+CGG - chr8.2:12710401-12710420 None:intergenic 30.0%
TCTCATTGAGAGATAATACA+TGG + chr8.2:12710412-12710431 MS.gene041394:CDS 30.0%
TCTTTAATGGGGTTATTCAT+TGG + chr8.2:12710499-12710518 MS.gene041394:CDS 30.0%
TTATAATTGCAGTACCACAA+GGG - chr8.2:12710158-12710177 None:intergenic 30.0%
! CAATGATAAATTTTCCCGTT+TGG + chr8.2:12710383-12710402 MS.gene041394:CDS 30.0%
! TTTTCCAGCAAGTTATTTGT+GGG + chr8.2:12710599-12710618 MS.gene041394:CDS 30.0%
!! ATAATATGCGTAGCTTTGAT+GGG + chr8.2:12710472-12710491 MS.gene041394:CDS 30.0%
!! GTTATTCATTGGTTGACTTT+TGG + chr8.2:12710510-12710529 MS.gene041394:CDS 30.0%
!! TATAATATGCGTAGCTTTGA+TGG + chr8.2:12710471-12710490 MS.gene041394:CDS 30.0%
!! TCTAGAGCATAACTCATTTT+GGG + chr8.2:12710848-12710867 MS.gene041394:CDS 30.0%
!!! TTCTAGAGCATAACTCATTT+TGG + chr8.2:12710847-12710866 MS.gene041394:CDS 30.0%
AAACGAATAAGAGACTTCAC+CGG - chr8.2:12709919-12709938 None:intergenic 35.0%
AATACAATGTGCATTCGTCT+TGG + chr8.2:12710691-12710710 MS.gene041394:CDS 35.0%
ACAGAAAGTGGTGACATTAT+TGG + chr8.2:12710777-12710796 MS.gene041394:CDS 35.0%
AGGAGGATATAGTTGAGATA+TGG + chr8.2:12710658-12710677 MS.gene041394:CDS 35.0%
CAATGAGAAAAACTCCAAAC+GGG - chr8.2:12710400-12710419 None:intergenic 35.0%
CACTTTCTGTAGAGCATATT+GGG - chr8.2:12710767-12710786 None:intergenic 35.0%
CATTTGATCATCAATTGGTC+CGG - chr8.2:12710880-12710899 None:intergenic 35.0%
CTTATAATTGCAGTACCACA+AGG - chr8.2:12710159-12710178 None:intergenic 35.0%
GACTTCACAAACAAATACCT+TGG + chr8.2:12710244-12710263 MS.gene041394:CDS 35.0%
GCAAGTTATTTGTGGGTATT+TGG + chr8.2:12710606-12710625 MS.gene041394:CDS 35.0%
GCAATTATAAGTTCGTGTAG+AGG + chr8.2:12710168-12710187 MS.gene041394:CDS 35.0%
GGAGGATATAGTTGAGATAT+GGG + chr8.2:12710659-12710678 MS.gene041394:CDS 35.0%
GGATGCATAAAATTAGGTCT+TGG - chr8.2:12710135-12710154 None:intergenic 35.0%
TATAATTGCAGTACCACAAG+GGG - chr8.2:12710157-12710176 None:intergenic 35.0%
TATTTGTTTGTGAAGTCCAG+TGG - chr8.2:12710241-12710260 None:intergenic 35.0%
TTGGAATAATTAGGAGACCA+AGG - chr8.2:12710264-12710283 None:intergenic 35.0%
! AATACCCACAAATAACTTGC+TGG - chr8.2:12710606-12710625 None:intergenic 35.0%
! CTTTTCCAGCAAGTTATTTG+TGG + chr8.2:12710598-12710617 MS.gene041394:CDS 35.0%
! TTGATGGGTCACTCTTTAAT+GGG + chr8.2:12710487-12710506 MS.gene041394:CDS 35.0%
! TTTGATGGGTCACTCTTTAA+TGG + chr8.2:12710486-12710505 MS.gene041394:CDS 35.0%
!! CACAAATAACTTGCTGGAAA+AGG - chr8.2:12710600-12710619 None:intergenic 35.0%
!! GGGAAAGAAACTTTTAGAGA+TGG + chr8.2:12710569-12710588 MS.gene041394:CDS 35.0%
AGAAACACTACCACTGTCAA+GGG - chr8.2:12710106-12710125 None:intergenic 40.0%
ATAATTGCAGTACCACAAGG+GGG - chr8.2:12710156-12710175 None:intergenic 40.0%
CAAGGGGGATGCATAAAATT+AGG - chr8.2:12710141-12710160 None:intergenic 40.0%
CCAATATGCTCTACAGAAAG+TGG + chr8.2:12710765-12710784 MS.gene041394:CDS 40.0%
CCACTTTCTGTAGAGCATAT+TGG - chr8.2:12710768-12710787 None:intergenic 40.0%
GGTGACATTATTGGAACAGA+TGG + chr8.2:12710786-12710805 MS.gene041394:CDS 40.0%
GTATTTGGAGACTTTCTCAG+TGG + chr8.2:12710621-12710640 MS.gene041394:CDS 40.0%
GTTAAGAGATGATTACGTGC+TGG + chr8.2:12710338-12710357 MS.gene041394:CDS 40.0%
GTTCTTGTTCTTCGTGTTGA+TGG + chr8.2:12710720-12710739 MS.gene041394:CDS 40.0%
TCTACTACAAGTGTGTGTTG+CGG - chr8.2:12710016-12710035 None:intergenic 40.0%
TTCTCAGTGGATACACTAGT+AGG + chr8.2:12710634-12710653 MS.gene041394:CDS 40.0%
! AATTTTATGCATCCCCCTTG+TGG + chr8.2:12710141-12710160 MS.gene041394:CDS 40.0%
! TGATGGGTCACTCTTTAATG+GGG + chr8.2:12710488-12710507 MS.gene041394:CDS 40.0%
!! AACTCATTTTGGGAAGGTTC+CGG + chr8.2:12710858-12710877 MS.gene041394:CDS 40.0%
!! GAGCATAACTCATTTTGGGA+AGG + chr8.2:12710852-12710871 MS.gene041394:CDS 40.0%
!! GGTTGACTTTTGGTCATGAT+CGG + chr8.2:12710520-12710539 MS.gene041394:CDS 40.0%
!! GTTGACTTTTGGTCATGATC+GGG + chr8.2:12710521-12710540 MS.gene041394:CDS 40.0%
!! TCAAAGGCGTTTGTAAGTCT+TGG + chr8.2:12709938-12709957 MS.gene041394:CDS 40.0%
CAGAAACACTACCACTGTCA+AGG - chr8.2:12710107-12710126 None:intergenic 45.0%
CAGTGGATACACTAGTAGGA+AGG + chr8.2:12710638-12710657 MS.gene041394:CDS 45.0%
TACCTATGGAATCCATCCAC+TGG + chr8.2:12710222-12710241 MS.gene041394:CDS 45.0%
TGGATACACTAGTAGGAAGG+AGG + chr8.2:12710641-12710660 MS.gene041394:CDS 45.0%
TGTGCATTCGTCTTGGACTA+AGG + chr8.2:12710698-12710717 MS.gene041394:CDS 45.0%
TGTTTGTGAAGTCCAGTGGA+TGG - chr8.2:12710237-12710256 None:intergenic 45.0%
! CGTAAAGCATCCCTTGACAG+TGG + chr8.2:12710093-12710112 MS.gene041394:CDS 50.0%
! GTCCAGTGGATGGATTCCAT+AGG - chr8.2:12710227-12710246 None:intergenic 50.0%
CAATCGCAGAGGAGAGGAGA+AGG + chr8.2:12709840-12709859 MS.gene041394:CDS 55.0%
GAGTCTCTGCTCTCACTCTC+TGG + chr8.2:12710912-12710931 MS.gene041394:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 12709835 12710953 12709835 ID=MS.gene041394
chr8.2 mRNA 12709835 12710953 12709835 ID=MS.gene041394.t1;Parent=MS.gene041394
chr8.2 exon 12709835 12710953 12709835 ID=MS.gene041394.t1.exon1;Parent=MS.gene041394.t1
chr8.2 CDS 12709835 12710953 12709835 ID=cds.MS.gene041394.t1;Parent=MS.gene041394.t1
Gene Sequence

>MS.gene041394

ATGAACAATCGCAGAGGAGAGGAGAAGGAAACGACACTCTATCTGCCTCATGATTTGATCATTCAAATATTATTATGGTTACCGGTGAAGTCTCTTATTCGTTTCAAAGGCGTTTGTAAGTCTTGGTTTTCTCTTATATCTGATCCCAACTTTGCAAATTCATATTTTCAACTTAGCGCCGCAACACACACTTGTAGTAGAATTATGTTCATAACAGACTGTATGATAGACAGTATTCTGAATACAGTCTCTTTAGATCGTAAAGCATCCCTTGACAGTGGTAGTGTTTCTGAAATACCAAGACCTAATTTTATGCATCCCCCTTGTGGTACTGCAATTATAAGTTCGTGTAGAGGGTTTATATTTTTGCGCAACTTTAAAAAATTATACCTATGGAATCCATCCACTGGACTTCACAAACAAATACCTTGGTCTCCTAATTATTCCAATGACGCTATTACATTTGATGATTACCATTTTTGTTTTGGATTTGGGTATGATCAGTTAAGAGATGATTACGTGCTGGTTTCAATCTCTTTTGTCTACTTCAATGATAAATTTTCCCGTTTGGAGTTTTTCTCATTGAGAGATAATACATGGAAAGAACTGGAAGTTACTCACTTCCCTTATATGTATTATAATATGCGTAGCTTTGATGGGTCACTCTTTAATGGGGTTATTCATTGGTTGACTTTTGGTCATGATCGGGATGCTATTATTGCATTTGATTTAATGGGAAAGAAACTTTTAGAGATGGAGATGCCTTTTCCAGCAAGTTATTTGTGGGTATTTGGAGACTTTCTCAGTGGATACACTAGTAGGAAGGAGGATATAGTTGAGATATGGGTGATGAAAGAATACAATGTGCATTCGTCTTGGACTAAGGTTCTTGTTCTTCGTGTTGATGGCATTCCTTCTAAATTCTTTTTCCCAATATGCTCTACAGAAAGTGGTGACATTATTGGAACAGATGGTGACACTACTTTGTTCAAGTATAATGACAAAGGACAGCTTCTAGAGCATAACTCATTTTGGGAAGGTTCCGGACCAATTGATGATCAAATGATCATGTATACAGAGTCTCTGCTCTCACTCTCTGGTGACAATGTGCAAGCCTAA

Protein sequence

>MS.gene041394.t1

MNNRRGEEKETTLYLPHDLIIQILLWLPVKSLIRFKGVCKSWFSLISDPNFANSYFQLSAATHTCSRIMFITDCMIDSILNTVSLDRKASLDSGSVSEIPRPNFMHPPCGTAIISSCRGFIFLRNFKKLYLWNPSTGLHKQIPWSPNYSNDAITFDDYHFCFGFGYDQLRDDYVLVSISFVYFNDKFSRLEFFSLRDNTWKELEVTHFPYMYYNMRSFDGSLFNGVIHWLTFGHDRDAIIAFDLMGKKLLEMEMPFPASYLWVFGDFLSGYTSRKEDIVEIWVMKEYNVHSSWTKVLVLRVDGIPSKFFFPICSTESGDIIGTDGDTTLFKYNDKGQLLEHNSFWEGSGPIDDQMIMYTESLLSLSGDNVQA