AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene50306

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50306.t1 MTR_4g023080 69.744 195 57 2 28 220 159 353 4.82e-91 271
MS.gene50306.t1 MTR_4g023080 82.222 45 8 0 1 45 62 106 7.03e-17 78.6
MS.gene50306.t1 MTR_4g023130 69.231 195 58 2 28 220 118 312 5.07e-90 267
MS.gene50306.t1 MTR_4g023090 68.020 197 46 3 42 221 190 386 1.88e-87 263
MS.gene50306.t1 MTR_4g023090 76.087 46 10 1 1 45 69 114 4.83e-13 67.8
MS.gene50306.t1 MTR_4g023380 65.366 205 46 3 42 221 175 379 1.89e-86 261
MS.gene50306.t1 MTR_4g023380 71.739 46 12 1 1 45 69 114 2.77e-11 62.4
MS.gene50306.t1 MTR_4g021785 66.484 182 59 1 42 221 174 355 3.61e-81 246
MS.gene50306.t1 MTR_4g021785 71.111 45 13 0 1 45 62 106 3.18e-12 65.1
MS.gene50306.t1 MTR_4g023120 58.537 205 70 3 32 221 166 370 1.63e-76 235
MS.gene50306.t1 MTR_4g023120 64.444 45 16 0 1 45 56 100 8.62e-11 60.8
MS.gene50306.t1 MTR_4g023070 58.333 204 70 3 32 220 166 369 2.97e-75 232
MS.gene50306.t1 MTR_3g103020 58.019 212 78 6 17 221 171 378 2.17e-72 224
MS.gene50306.t1 MTR_4g023150 63.736 182 61 3 43 219 177 358 4.55e-71 221
MS.gene50306.t1 MTR_4g023440 61.326 181 34 1 41 221 188 332 5.01e-70 217
MS.gene50306.t1 MTR_4g023200 62.088 182 64 3 43 219 177 358 7.84e-70 218
MS.gene50306.t1 MTR_8g040935 55.981 209 79 6 22 221 4 208 9.98e-70 212
MS.gene50306.t1 MTR_4g023190 63.736 182 60 4 43 219 177 357 1.24e-69 217
MS.gene50306.t1 MTR_6g060650 56.122 196 78 5 29 220 181 372 7.78e-67 210
MS.gene50306.t1 MTR_4g116320 59.239 184 67 4 41 218 74 255 2.88e-66 205
MS.gene50306.t1 MTR_4g116330 55.851 188 77 3 40 221 193 380 1.97e-65 207
MS.gene50306.t1 MTR_4g117720 58.854 192 66 6 41 221 189 378 8.77e-64 202
MS.gene50306.t1 MTR_4g109280 56.383 188 72 5 41 221 175 359 9.14e-63 199
MS.gene50306.t1 MTR_4g109270 50.000 228 102 6 5 221 138 364 1.46e-62 199
MS.gene50306.t1 MTR_6g463430 58.824 187 66 5 41 221 21 202 8.83e-62 192
MS.gene50306.t1 MTR_4g117850 53.081 211 87 7 17 218 169 376 7.78e-60 192
MS.gene50306.t1 MTR_8g433030 47.541 244 93 8 6 216 96 337 3.91e-58 187
MS.gene50306.t1 MTR_4g117780 55.026 189 77 3 41 221 179 367 1.31e-56 184
MS.gene50306.t1 MTR_4g117770 55.263 190 77 3 40 221 178 367 5.64e-56 182
MS.gene50306.t1 MTR_4g117810 55.263 190 77 3 40 221 178 367 5.64e-56 182
MS.gene50306.t1 MTR_3g034180 54.404 193 74 6 40 221 300 489 1.53e-55 184
MS.gene50306.t1 MTR_4g122850 55.497 191 74 9 40 221 176 364 8.25e-55 179
MS.gene50306.t1 MTR_3g034160 52.857 210 79 6 21 220 175 374 1.30e-54 179
MS.gene50306.t1 MTR_8g032390 54.645 183 75 6 40 216 190 370 2.61e-54 178
MS.gene50306.t1 MTR_4g094365 52.910 189 80 6 40 221 178 364 2.59e-53 175
MS.gene50306.t1 MTR_5g070130 47.959 196 88 6 40 221 182 377 1.53e-51 171
MS.gene50306.t1 MTR_8g433040 51.872 187 74 4 40 221 189 364 4.99e-51 169
MS.gene50306.t1 MTR_8g032380 51.872 187 74 4 40 221 189 364 4.99e-51 169
MS.gene50306.t1 MTR_3g034130 51.337 187 76 6 22 199 172 352 1.15e-50 168
MS.gene50306.t1 MTR_5g097210 52.973 185 75 7 41 217 179 359 6.99e-50 166
MS.gene50306.t1 MTR_4g118380 52.514 179 70 5 29 196 183 357 2.99e-49 164
MS.gene50306.t1 MTR_1g055195 45.455 220 101 8 14 218 260 475 7.17e-49 166
MS.gene50306.t1 MTR_4g118400 51.579 190 74 6 29 215 120 294 1.58e-48 161
MS.gene50306.t1 MTR_5g070080 52.128 188 83 6 40 221 200 386 2.15e-47 160
MS.gene50306.t1 MTR_1g055175 46.032 189 91 6 41 220 14 200 6.98e-47 154
MS.gene50306.t1 MTR_5g070088 47.396 192 88 5 40 221 198 386 3.19e-46 157
MS.gene50306.t1 MTR_4g117870 48.108 185 58 6 40 221 118 267 7.27e-46 153
MS.gene50306.t1 MTR_1g055165 39.200 250 112 6 9 220 70 317 1.01e-43 149
MS.gene50306.t1 MTR_1g055135 49.383 162 71 4 67 220 216 374 2.25e-42 147
MS.gene50306.t1 MTR_4g117530 43.407 182 72 4 41 221 102 253 7.26e-42 142
MS.gene50306.t1 MTR_4g116330 43.850 187 62 3 40 221 193 341 8.86e-42 144
MS.gene50306.t1 MTR_7g079370 45.699 186 87 7 40 215 169 350 2.63e-39 139
MS.gene50306.t1 MTR_4g023430 79.012 81 12 1 146 221 142 222 2.95e-38 132
MS.gene50306.t1 MTR_1g055250 44.000 175 87 7 41 208 83 253 5.12e-38 134
MS.gene50306.t1 MTR_7g079400 42.500 200 94 8 37 221 144 337 7.59e-36 129
MS.gene50306.t1 MTR_4g118370 43.316 187 77 8 40 218 92 257 1.36e-35 126
MS.gene50306.t1 MTR_4g118360 55.814 129 46 5 99 220 1 125 5.02e-35 121
MS.gene50306.t1 MTR_5g023000 60.606 99 37 1 125 221 1 99 1.82e-34 119
MS.gene50306.t1 MTR_4g117750 45.128 195 88 7 41 220 168 358 2.35e-34 127
MS.gene50306.t1 MTR_4g117750 50.000 132 55 2 99 219 350 481 3.57e-31 119
MS.gene50306.t1 MTR_4g122860 40.455 220 92 10 11 221 131 320 8.02e-34 124
MS.gene50306.t1 MTR_8g102520 38.021 192 104 6 41 221 135 322 7.56e-33 121
MS.gene50306.t1 MTR_4g121580 42.697 178 66 7 41 211 191 339 8.10e-30 114
MS.gene50306.t1 MTR_8g098830 37.158 183 100 7 41 215 40 215 1.41e-27 105
MS.gene50306.t1 MTR_2g048580 35.052 194 99 8 41 221 163 342 3.23e-27 106
MS.gene50306.t1 MTR_7g079420 38.919 185 93 8 51 221 966 1144 2.21e-26 107
MS.gene50306.t1 MTR_7g117720 35.124 242 100 9 9 215 52 271 2.77e-26 102
MS.gene50306.t1 MTR_4g023100 83.636 55 9 0 167 221 65 119 1.73e-25 96.7
MS.gene50306.t1 MTR_7g079450 41.844 141 74 4 84 221 2 137 2.01e-25 97.1
MS.gene50306.t1 MTR_4g114700 35.922 206 68 5 15 212 69 218 9.48e-25 97.8
MS.gene50306.t1 MTR_4g117430 53.409 88 36 3 41 125 70 155 8.89e-21 85.5
MS.gene50306.t1 MTR_4g122840 43.382 136 38 5 90 221 164 264 9.75e-20 85.1
MS.gene50306.t1 MTR_8g013010 50.485 103 41 5 22 122 215 309 4.93e-19 84.0
MS.gene50306.t1 MTR_8g013005 65.517 58 18 1 165 220 1 58 3.02e-17 73.2
MS.gene50306.t1 MTR_1g055145 35.338 133 61 3 9 139 93 202 3.68e-15 72.8
MS.gene50306.t1 MTR_2g028160 32.624 141 81 6 42 171 201 338 8.04e-13 67.0
MS.gene50306.t1 MTR_3g036290 33.333 177 96 9 46 213 193 356 1.09e-12 66.6
MS.gene50306.t1 MTR_2g024110 29.082 196 118 8 42 218 177 370 3.87e-12 65.1
MS.gene50306.t1 MTR_2g426020 26.316 190 124 7 42 218 197 383 1.09e-11 63.5
MS.gene50306.t1 MTR_2g025420 30.000 210 122 11 24 213 188 392 1.12e-11 63.5
MS.gene50306.t1 MTR_2g064960 70.732 41 10 1 182 220 18 58 1.13e-11 58.5
MS.gene50306.t1 MTR_1g068875 28.205 156 100 6 44 190 179 331 1.32e-11 63.5
MS.gene50306.t1 MTR_2g028130 29.078 141 88 5 40 171 199 336 1.87e-11 63.2
MS.gene50306.t1 MTR_2g425980 29.897 194 117 8 42 220 196 385 2.39e-11 62.8
MS.gene50306.t1 MTR_1g094210 29.814 161 91 7 43 192 227 376 2.49e-11 62.8
MS.gene50306.t1 MTR_6g034720 41.772 79 43 2 40 117 108 184 3.78e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50306.t1 AT3G06240 29.282 181 114 6 41 213 245 419 2.37e-11 62.8

Find 44 sgRNAs with CRISPR-Local

Find 74 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAACCATTTACTTAATTC+TGG 0.247939 4.4:-77670284 MS.gene50306:CDS
TTGGAGAATTTCTCAGTCTA+TGG 0.267319 4.4:-77670250 MS.gene50306:CDS
AGAAAAGGGTGTCTATTTAA+TGG 0.280867 4.4:-77670410 MS.gene50306:CDS
ATAAGGATACAGTTGAAATA+TGG 0.287555 4.4:-77670214 MS.gene50306:CDS
ATGATAAAGGACAGCTATTA+AGG 0.288020 4.4:-77670040 MS.gene50306:CDS
AATTGTTGCCTTTGATTTAA+CGG 0.294431 4.4:-77670342 MS.gene50306:CDS
CACTTCCCTTATGCTGTTCC+TGG 0.319967 4.4:-77670440 MS.gene50306:CDS
GAAAAGGGTGTCTATTTAAT+GGG 0.320229 4.4:-77670409 MS.gene50306:CDS
TATTTAATGGGGCTATTCAT+TGG 0.329021 4.4:-77670397 MS.gene50306:CDS
TCAACCGGAAAATAAGATTC+TGG 0.339211 4.4:+77670712 None:intergenic
TTGTTTGAGATGCCTCTTCC+AGG 0.350585 4.4:-77670311 MS.gene50306:CDS
ATCATCATACTTGACCAATC+TGG 0.372317 4.4:+77670058 None:intergenic
CACGAACCTCTAATTTCAAC+CGG 0.420465 4.4:+77670697 None:intergenic
ATCCGATGTTGTCATGTATA+CGG 0.422839 4.4:-77669994 MS.gene50306:CDS
TGATTACCAGGAACAGCATA+AGG 0.434344 4.4:+77670434 None:intergenic
GTTCCTGGTAATCACAGAAA+AGG 0.449998 4.4:-77670425 MS.gene50306:CDS
TAAACTTGCTCGTTGTCACC+AGG 0.464044 4.4:+77669954 None:intergenic
AAATTAAGATTCTGTGAAGC+AGG 0.466279 4.4:+77670742 None:intergenic
TAAGGATACAGTTGAAATAT+GGG 0.473963 4.4:-77670213 MS.gene50306:CDS
TTTCCTTTCCGTTAAATCAA+AGG 0.475134 4.4:+77670334 None:intergenic
AGGAAATCTTAATTCCAGAT+TGG 0.475368 4.4:-77670072 MS.gene50306:CDS
TGGAGAATTTCTCAGTCTAT+GGG 0.489976 4.4:-77670249 MS.gene50306:CDS
TAATGGGGCTATTCATTGGA+TGG 0.501912 4.4:-77670393 MS.gene50306:CDS
AATACAAAGTGCATTCGTCT+TGG 0.503299 4.4:-77670181 MS.gene50306:CDS
ATAGATTGAATTTCATGAGA+TGG 0.504788 4.4:+77670793 None:intergenic
ATGGGCTGTGGACTATGATA+AGG 0.510847 4.4:-77670231 MS.gene50306:CDS
ATAGGGTGAAAATAGCGATC+AGG 0.512584 4.4:+77670125 None:intergenic
TTGGTCAAGTATGATGATAA+AGG 0.512594 4.4:-77670053 MS.gene50306:CDS
TTCCTGGTAATCACAGAAAA+GGG 0.536965 4.4:-77670424 MS.gene50306:CDS
ATTTCTCAGTCTATGGGCTG+TGG 0.553738 4.4:-77670243 MS.gene50306:CDS
TCTCATTTAGAGATAATGCA+TGG 0.564733 4.4:-77670481 MS.gene50306:intron
AATGCATGGAAAGAAATTGA+AGG 0.565650 4.4:-77670467 MS.gene50306:CDS
TTGCCTTTGATTTAACGGAA+AGG 0.569675 4.4:-77670337 MS.gene50306:CDS
TGGTTAAAATCACCTGGAAG+AGG 0.570122 4.4:+77670299 None:intergenic
GTGAAAATAGCGATCAGGAA+TGG 0.580924 4.4:+77670130 None:intergenic
GATTACCAGGAACAGCATAA+GGG 0.587351 4.4:+77670435 None:intergenic
AGTAAATGGTTAAAATCACC+TGG 0.587427 4.4:+77670293 None:intergenic
GAGTCTCTACTTTCACTCCC+TGG 0.604770 4.4:-77669972 MS.gene50306:CDS
CTATGCGTCGTGATTTACGT+TGG 0.619317 4.4:-77670370 MS.gene50306:CDS
AATTAAGATTCTGTGAAGCA+GGG 0.631097 4.4:+77670743 None:intergenic
AAACTTGCTCGTTGTCACCA+GGG 0.636630 4.4:+77669955 None:intergenic
ATCGGATTGACTATTACAGA+AGG 0.638583 4.4:+77670010 None:intergenic
AAAAGGGTGTCTATTTAATG+GGG 0.654843 4.4:-77670408 MS.gene50306:CDS
CTCCGTATACATGACAACAT+CGG 0.684857 4.4:+77669992 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAACCAGAATTAAGTAAA+TGG + chr4.4:77670485-77670504 None:intergenic 20.0%
!! TTTAACCATTTACTTAATTC+TGG - chr4.4:77670477-77670496 MS.gene50306:intron 20.0%
!!! ATTTACTTAATTCTGGTTTT+TGG - chr4.4:77670484-77670503 MS.gene50306:intron 20.0%
!!! TTTACTTAATTCTGGTTTTT+GGG - chr4.4:77670485-77670504 MS.gene50306:intron 20.0%
! ACAAAAAACGGTGATATTAT+CGG - chr4.4:77670666-77670685 MS.gene50306:intron 25.0%
! ATAAGGATACAGTTGAAATA+TGG - chr4.4:77670547-77670566 MS.gene50306:intron 25.0%
! ATAGATTGAATTTCATGAGA+TGG + chr4.4:77669971-77669990 None:intergenic 25.0%
! TAAGGATACAGTTGAAATAT+GGG - chr4.4:77670548-77670567 MS.gene50306:intron 25.0%
!! AATTGTTGCCTTTGATTTAA+CGG - chr4.4:77670419-77670438 MS.gene50306:CDS 25.0%
!! GCTAATAATTTGGAATCAAA+AGG + chr4.4:77670175-77670194 None:intergenic 25.0%
!!! TGTTTTTTAAATCCAGTAGA+TGG + chr4.4:77670139-77670158 None:intergenic 25.0%
AAATGTGTTGAAACAGCATT+AGG + chr4.4:77670252-77670271 None:intergenic 30.0%
AAATTAAGATTCTGTGAAGC+AGG + chr4.4:77670022-77670041 None:intergenic 30.0%
AATGCATGGAAAGAAATTGA+AGG - chr4.4:77670294-77670313 MS.gene50306:CDS 30.0%
AATTAAGATTCTGTGAAGCA+GGG + chr4.4:77670021-77670040 None:intergenic 30.0%
AGGAAATCTTAATTCCAGAT+TGG - chr4.4:77670689-77670708 MS.gene50306:intron 30.0%
AGTAAATGGTTAAAATCACC+TGG + chr4.4:77670471-77670490 None:intergenic 30.0%
ATGATAAAGGACAGCTATTA+AGG - chr4.4:77670721-77670740 MS.gene50306:CDS 30.0%
ATTAGGTATGGTTGGATTAT+AGG + chr4.4:77670235-77670254 None:intergenic 30.0%
TATTTAATGGGGCTATTCAT+TGG - chr4.4:77670364-77670383 MS.gene50306:CDS 30.0%
TCTCATTTAGAGATAATGCA+TGG - chr4.4:77670280-77670299 MS.gene50306:CDS 30.0%
TTGGTCAAGTATGATGATAA+AGG - chr4.4:77670708-77670727 MS.gene50306:CDS 30.0%
TTTCCTTTCCGTTAAATCAA+AGG + chr4.4:77670430-77670449 None:intergenic 30.0%
! TATTTTCCGGTTGAAATTAG+AGG - chr4.4:77670058-77670077 MS.gene50306:CDS 30.0%
! TTGACAAGGTGCTAATAATT+TGG + chr4.4:77670185-77670204 None:intergenic 30.0%
!! AAAAGGGTGTCTATTTAATG+GGG - chr4.4:77670353-77670372 MS.gene50306:CDS 30.0%
!! AGAAAAGGGTGTCTATTTAA+TGG - chr4.4:77670351-77670370 MS.gene50306:CDS 30.0%
!! GAAAAGGGTGTCTATTTAAT+GGG - chr4.4:77670352-77670371 MS.gene50306:CDS 30.0%
!!! AATTCTGGTTTTTGGGTATT+TGG - chr4.4:77670492-77670511 MS.gene50306:intron 30.0%
!!! GATAATATCACCGTTTTTTG+TGG + chr4.4:77670667-77670686 None:intergenic 30.0%
AAAAACGGTGATATTATCGG+AGG - chr4.4:77670669-77670688 MS.gene50306:intron 35.0%
AAATTAGAGGTTCGTGTAGA+GGG - chr4.4:77670071-77670090 MS.gene50306:CDS 35.0%
AATACAAAGTGCATTCGTCT+TGG - chr4.4:77670580-77670599 MS.gene50306:intron 35.0%
ATATGTAGATGTTTGGACGA+CGG + chr4.4:77670111-77670130 None:intergenic 35.0%
ATCATCATACTTGACCAATC+TGG + chr4.4:77670706-77670725 None:intergenic 35.0%
ATCCGATGTTGTCATGTATA+CGG - chr4.4:77670767-77670786 MS.gene50306:CDS 35.0%
ATCGGATTGACTATTACAGA+AGG + chr4.4:77670754-77670773 None:intergenic 35.0%
CAAGTAATCATCTCTTGACA+AGG + chr4.4:77670199-77670218 None:intergenic 35.0%
CCTATGTACTCCACAAAAAA+CGG - chr4.4:77670654-77670673 MS.gene50306:intron 35.0%
CTTGTCAAGAGATGATTACT+TGG - chr4.4:77670197-77670216 MS.gene50306:CDS 35.0%
GGATTCCATATGTAGATGTT+TGG + chr4.4:77670118-77670137 None:intergenic 35.0%
TACATATGGAATCCATCTAC+TGG - chr4.4:77670124-77670143 MS.gene50306:CDS 35.0%
TCAACCGGAAAATAAGATTC+TGG + chr4.4:77670052-77670071 None:intergenic 35.0%
TGGAGAATTTCTCAGTCTAT+GGG - chr4.4:77670512-77670531 MS.gene50306:intron 35.0%
TGTTGAAACAGCATTAGGTA+TGG + chr4.4:77670247-77670266 None:intergenic 35.0%
TTCCTGGTAATCACAGAAAA+GGG - chr4.4:77670337-77670356 MS.gene50306:CDS 35.0%
TTGGAGAATTTCTCAGTCTA+TGG - chr4.4:77670511-77670530 MS.gene50306:intron 35.0%
! TTGCCTTTGATTTAACGGAA+AGG - chr4.4:77670424-77670443 MS.gene50306:CDS 35.0%
!!! CGTTTTTTGTGGAGTACATA+GGG + chr4.4:77670656-77670675 None:intergenic 35.0%
!!! GCTTCCAGAATCTTATTTTC+CGG - chr4.4:77670045-77670064 MS.gene50306:CDS 35.0%
ATAGGGTGAAAATAGCGATC+AGG + chr4.4:77670639-77670658 None:intergenic 40.0%
CACGAACCTCTAATTTCAAC+CGG + chr4.4:77670067-77670086 None:intergenic 40.0%
CTCCGTATACATGACAACAT+CGG + chr4.4:77670772-77670791 None:intergenic 40.0%
GAAACAGCATTAGGTATGGT+TGG + chr4.4:77670243-77670262 None:intergenic 40.0%
GAAATTAGAGGTTCGTGTAG+AGG - chr4.4:77670070-77670089 MS.gene50306:CDS 40.0%
GATTACCAGGAACAGCATAA+GGG + chr4.4:77670329-77670348 None:intergenic 40.0%
GTCAAGAGATGATTACTTGG+TGG - chr4.4:77670200-77670219 MS.gene50306:CDS 40.0%
GTCGTCCAAACATCTACATA+TGG - chr4.4:77670110-77670129 MS.gene50306:CDS 40.0%
GTGAAAATAGCGATCAGGAA+TGG + chr4.4:77670634-77670653 None:intergenic 40.0%
GTTCCTGGTAATCACAGAAA+AGG - chr4.4:77670336-77670355 MS.gene50306:CDS 40.0%
TAATGGGGCTATTCATTGGA+TGG - chr4.4:77670368-77670387 MS.gene50306:CDS 40.0%
TGATTACCAGGAACAGCATA+AGG + chr4.4:77670330-77670349 None:intergenic 40.0%
TGGTTAAAATCACCTGGAAG+AGG + chr4.4:77670465-77670484 None:intergenic 40.0%
TTGGAATCAAAAGGAGACAC+AGG + chr4.4:77670166-77670185 None:intergenic 40.0%
!!! CCGTTTTTTGTGGAGTACAT+AGG + chr4.4:77670657-77670676 None:intergenic 40.0%
CTATGCGTCGTGATTTACGT+TGG - chr4.4:77670391-77670410 MS.gene50306:CDS 45.0%
! AAACTTGCTCGTTGTCACCA+GGG + chr4.4:77670809-77670828 None:intergenic 45.0%
! ATGGGCTGTGGACTATGATA+AGG - chr4.4:77670530-77670549 MS.gene50306:intron 45.0%
! ATTTCTCAGTCTATGGGCTG+TGG - chr4.4:77670518-77670537 MS.gene50306:intron 45.0%
! CACCCTTTTCTGTGATTACC+AGG + chr4.4:77670342-77670361 None:intergenic 45.0%
! TAAACTTGCTCGTTGTCACC+AGG + chr4.4:77670810-77670829 None:intergenic 45.0%
! TTGTTTGAGATGCCTCTTCC+AGG - chr4.4:77670450-77670469 MS.gene50306:CDS 45.0%
CACTTCCCTTATGCTGTTCC+TGG - chr4.4:77670321-77670340 MS.gene50306:CDS 50.0%
GAGTCTCTACTTTCACTCCC+TGG - chr4.4:77670789-77670808 MS.gene50306:CDS 50.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 77669953 77670830 77669953 ID=MS.gene50306
chr4.4 mRNA 77669953 77670830 77669953 ID=MS.gene50306.t1;Parent=MS.gene50306
chr4.4 exon 77670704 77670830 77670704 ID=MS.gene50306.t1.exon1;Parent=MS.gene50306.t1
chr4.4 CDS 77670704 77670830 77670704 ID=cds.MS.gene50306.t1;Parent=MS.gene50306.t1
chr4.4 exon 77669953 77670491 77669953 ID=MS.gene50306.t1.exon2;Parent=MS.gene50306.t1
chr4.4 CDS 77669953 77670491 77669953 ID=cds.MS.gene50306.t1;Parent=MS.gene50306.t1
Gene Sequence

>MS.gene50306

ATGTGCATATCATATCCATCTCATGAAATTCAATCTATAGATTTTGAAGCATTTCTTAATGATGACCCTGCTTCACAGAATCTTAATTTTTCGCTTCCAGAATCTTATTTTCCGGTTGAAATTAGAGGTTCGTGTAGAGGGTTTATACTTTTGTACCGTCGTCCAAACATCTACATATGGAATCCATCTACTGGATTTAAAAAACAAATACCTGTGTCTCCTTTTGATTCCAAATTATTAGCACCTTGTCAAGAGATGATTACTTGGTGGTTTCATTGTCCTATAATCCAACCATACCTAATGCTGTTTCAACACATTTGAAGTTTTTCTCATTTAGAGATAATGCATGGAAAGAAATTGAAGGTAATCACTTCCCTTATGCTGTTCCTGGTAATCACAGAAAAGGGTGTCTATTTAATGGGGCTATTCATTGGATGGCTATGCGTCGTGATTTACGTTGGAATGTAATTGTTGCCTTTGATTTAACGGAAAGGAAATTGTTTGAGATGCCTCTTCCAGGTGATTTTAACCATTTACTTAATTCTGGTTTTTGGGTATTTGGAGAATTTCTCAGTCTATGGGCTGTGGACTATGATAAGGATACAGTTGAAATATGGGTGATGAAAGAATACAAAGTGCATTCGTCTTGGAATAAAATTCTTGTTCTTTCTGTTCATGCCATTCCTGATCGCTATTTTCACCCTATGTACTCCACAAAAAACGGTGATATTATCGGAGGAAATCTTAATTCCAGATTGGTCAAGTATGATGATAAAGGACAGCTATTAAGGCATCGCTCCTTCTGTAATAGTCAATCCGATGTTGTCATGTATACGGAGTCTCTACTTTCACTCCCTGGTGACAACGAGCAAGTTTAA
Protein sequence

>MS.gene50306.t1

MCISYPSHEIQSIDFEAFLNDDPASQNLNFSLPESYFPVEIRDNAWKEIEGNHFPYAVPGNHRKGCLFNGAIHWMAMRRDLRWNVIVAFDLTERKLFEMPLPGDFNHLLNSGFWVFGEFLSLWAVDYDKDTVEIWVMKEYKVHSSWNKILVLSVHAIPDRYFHPMYSTKNGDIIGGNLNSRLVKYDDKGQLLRHRSFCNSQSDVVMYTESLLSLPGDNEQV