AlfalfaGEDB | MS.gene017412

M. sativa cultivar XinJiangDaYe / MS.gene017412

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene017412.t1	PNY00770.1	51.5	237	93	9	15	243	27	249	1.80E-47	199.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene017412.t1	A0A2K3NCL9	51.5	237	93	9	15	243	27	249	1.3e-47	199.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene017412	MS.gene041392	PPI
MS.gene066622	MS.gene017412	PPI
MS.gene017412	MS.gene50297	PPI
MS.gene017412	MS.gene42445	PPI
MS.gene44883	MS.gene017412	PPI
MS.gene017412	MS.gene86273	PPI
MS.gene017412	MS.gene26830	PPI
MS.gene017412	MS.gene40985	PPI
MS.gene017412	MS.gene22715	PPI
MS.gene017412	MS.gene000038	PPI
MS.gene017412	MS.gene038756	PPI
MS.gene017412	MS.gene51207	PPI
MS.gene017412	MS.gene57529	PPI
MS.gene87588	MS.gene017412	PPI
MS.gene017412	MS.gene36595	PPI
MS.gene017412	MS.gene57527	PPI
MS.gene017412	MS.gene024004	PPI
MS.gene017412	MS.gene045140	PPI
MS.gene017412	MS.gene070462	PPI
MS.gene017412	MS.gene50298	PPI
MS.gene009883	MS.gene017412	PPI
MS.gene017412	MS.gene061240	PPI
MS.gene017412	MS.gene041473	PPI
MS.gene017412	MS.gene88780	PPI
MS.gene017412	MS.gene064086	PPI
MS.gene017412	MS.gene035234	PPI
MS.gene017412	MS.gene058989	PPI
MS.gene017412	MS.gene50326	PPI
MS.gene27020	MS.gene017412	PPI
MS.gene017412	MS.gene041468	PPI
MS.gene017412	MS.gene034686	PPI
MS.gene017412	MS.gene015089	PPI
MS.gene017412	MS.gene066639	PPI
MS.gene017412	MS.gene041491	PPI
MS.gene017412	MS.gene42447	PPI
MS.gene017412	MS.gene51189	PPI
MS.gene96126	MS.gene017412	PPI
MS.gene017412	MS.gene43789	PPI
MS.gene017412	MS.gene046958	PPI
MS.gene017412	MS.gene066622	PPI
MS.gene017412	MS.gene40904	PPI
MS.gene017412	MS.gene044425	PPI
MS.gene017412	MS.gene57537	PPI
MS.gene017412	MS.gene87573	PPI
MS.gene51204	MS.gene017412	PPI
MS.gene036557	MS.gene017412	PPI
MS.gene017412	MS.gene064104	PPI
MS.gene017412	MS.gene81242	PPI
MS.gene017412	MS.gene59637	PPI
MS.gene017412	MS.gene033426	PPI
MS.gene017412	MS.gene27022	PPI
MS.gene017412	MS.gene88776	PPI
MS.gene017412	MS.gene97996	PPI
MS.gene017412	MS.gene35068	PPI
MS.gene017412	MS.gene035261	PPI
MS.gene017412	MS.gene87585	PPI
MS.gene017412	MS.gene041390	PPI
MS.gene017412	MS.gene023999	PPI
MS.gene017412	MS.gene024009	PPI
MS.gene017412	MS.gene036599	PPI
MS.gene82082	MS.gene017412	PPI
MS.gene017412	MS.gene40887	PPI
MS.gene017412	MS.gene87200	PPI
MS.gene017412	MS.gene42444	PPI
MS.gene017412	MS.gene44892	PPI
MS.gene017412	MS.gene80884	PPI
MS.gene017412	MS.gene59639	PPI
MS.gene017412	MS.gene035237	PPI
MS.gene57535	MS.gene017412	PPI
MS.gene017412	MS.gene000036	PPI
MS.gene017412	MS.gene44886	PPI
MS.gene017412	MS.gene50309	PPI
MS.gene017412	MS.gene059156	PPI
MS.gene017412	MS.gene51199	PPI
MS.gene017412	MS.gene035263	PPI
MS.gene017412	MS.gene036664	PPI
MS.gene017412	MS.gene053257	PPI
MS.gene017412	MS.gene010758	PPI
MS.gene017412	MS.gene77858	PPI
MS.gene017412	MS.gene51201	PPI
MS.gene44885	MS.gene017412	PPI
MS.gene011679	MS.gene017412	PPI
MS.gene017412	MS.gene009893	PPI
MS.gene017412	MS.gene045475	PPI
MS.gene017412	MS.gene50336	PPI
MS.gene017412	MS.gene57526	PPI
MS.gene017412	MS.gene87586	PPI
MS.gene017412	MS.gene77704	PPI
MS.gene017412	MS.gene50305	PPI
MS.gene017412	MS.gene75875	PPI
MS.gene017412	MS.gene63658	PPI
MS.gene017412	MS.gene68890	PPI
MS.gene017412	MS.gene60027	PPI
MS.gene017412	MS.gene033081	PPI
MS.gene017412	MS.gene036663	PPI
MS.gene017412	MS.gene68580	PPI
MS.gene017412	MS.gene072177	PPI
MS.gene017412	MS.gene92376	PPI
MS.gene017412	MS.gene58781	PPI
MS.gene017412	MS.gene57525	PPI
MS.gene017412	MS.gene63657	PPI
MS.gene017412	MS.gene059157	PPI
MS.gene017412	MS.gene023996	PPI
MS.gene017412	MS.gene030114	PPI
MS.gene063414	MS.gene017412	PPI
MS.gene017412	MS.gene58716	PPI
MS.gene017412	MS.gene045473	PPI
MS.gene017412	MS.gene50301	PPI
MS.gene017412	MS.gene87569	PPI
MS.gene017412	MS.gene88774	PPI
MS.gene017412	MS.gene54049	PPI
MS.gene017412	MS.gene036582	PPI
MS.gene017412	MS.gene031590	PPI
MS.gene017412	MS.gene44883	PPI
MS.gene017412	MS.gene019504	PPI
MS.gene017412	MS.gene40984	PPI
MS.gene017412	MS.gene033427	PPI
MS.gene017412	MS.gene066623	PPI
MS.gene017412	MS.gene064090	PPI
MS.gene26957	MS.gene017412	PPI
MS.gene017412	MS.gene24208	PPI
MS.gene017412	MS.gene58317	PPI
MS.gene066620	MS.gene017412	PPI
MS.gene017412	MS.gene90742	PPI
MS.gene017412	MS.gene41046	PPI
MS.gene017412	MS.gene24212	PPI
MS.gene017412	MS.gene51191	PPI
MS.gene017412	MS.gene50332	PPI
MS.gene017412	MS.gene77856	PPI
MS.gene017412	MS.gene024979	PPI
MS.gene017412	MS.gene40902	PPI
MS.gene017412	MS.gene041475	PPI
MS.gene58781	MS.gene017412	PPI
MS.gene017412	MS.gene64203	PPI
MS.gene017412	MS.gene24826	PPI
MS.gene017412	MS.gene063472	PPI
MS.gene017412	MS.gene025887	PPI
MS.gene017412	MS.gene43790	PPI
MS.gene017412	MS.gene034680	PPI
MS.gene017412	MS.gene31587	PPI
MS.gene017412	MS.gene032970	PPI
MS.gene017412	MS.gene27021	PPI
MS.gene017412	MS.gene51208	PPI
MS.gene017412	MS.gene044563	PPI
MS.gene000035	MS.gene017412	PPI
MS.gene017412	MS.gene50327	PPI
MS.gene87569	MS.gene017412	PPI
MS.gene017412	MS.gene066626	PPI
MS.gene017412	MS.gene40982	PPI
MS.gene017412	MS.gene50339	PPI
MS.gene87573	MS.gene017412	PPI
MS.gene017412	MS.gene063474	PPI
MS.gene019504	MS.gene017412	PPI
MS.gene017412	MS.gene42452	PPI
MS.gene017412	MS.gene88416	PPI
MS.gene017412	MS.gene57530	PPI
MS.gene017412	MS.gene84698	PPI
MS.gene017412	MS.gene003076	PPI
MS.gene017412	MS.gene009892	PPI
MS.gene017412	MS.gene67687	PPI
MS.gene017412	MS.gene62398	PPI
MS.gene017412	MS.gene26101	PPI
MS.gene017412	MS.gene006705	PPI
MS.gene017412	MS.gene061241	PPI
MS.gene017412	MS.gene51192	PPI
MS.gene26949	MS.gene017412	PPI
MS.gene017412	MS.gene51188	PPI
MS.gene017412	MS.gene033875	PPI
MS.gene017412	MS.gene38220	PPI
MS.gene017412	MS.gene40986	PPI
MS.gene017412	MS.gene36704	PPI
MS.gene017412	MS.gene041394	PPI
MS.gene017412	MS.gene034688	PPI
MS.gene017412	MS.gene58239	PPI
MS.gene017412	MS.gene03060	PPI
MS.gene017412	MS.gene24213	PPI
MS.gene017412	MS.gene033440	PPI
MS.gene017412	MS.gene024011	PPI
MS.gene017412	MS.gene58241	PPI
MS.gene017412	MS.gene58313	PPI
MS.gene017412	MS.gene064109	PPI
MS.gene017412	MS.gene058696	PPI
MS.gene017412	MS.gene63655	PPI
MS.gene017412	MS.gene035238	PPI
MS.gene017412	MS.gene39262	PPI
MS.gene017412	MS.gene85043	PPI
MS.gene017412	MS.gene064114	PPI
MS.gene017412	MS.gene87563	PPI
MS.gene017412	MS.gene019505	PPI
MS.gene017412	MS.gene062698	PPI
MS.gene017412	MS.gene26829	PPI
MS.gene017412	MS.gene58320	PPI
MS.gene017412	MS.gene80610	PPI
MS.gene019506	MS.gene017412	PPI
MS.gene017412	MS.gene033083	PPI
MS.gene017412	MS.gene036557	PPI
MS.gene017412	MS.gene053256	PPI
MS.gene017412	MS.gene40886	PPI
MS.gene69309	MS.gene017412	PPI
MS.gene017412	MS.gene041391	PPI
MS.gene017412	MS.gene033443	PPI
MS.gene017412	MS.gene036583	PPI
MS.gene017412	MS.gene51202	PPI
MS.gene017412	MS.gene021553	PPI
MS.gene017412	MS.gene045474	PPI
MS.gene017412	MS.gene011106	PPI
MS.gene017412	MS.gene058701	PPI
MS.gene017412	MS.gene036558	PPI
MS.gene017412	MS.gene041474	PPI
MS.gene017412	MS.gene87554	PPI
MS.gene017412	MS.gene009891	PPI
MS.gene017412	MS.gene27051	PPI
MS.gene017412	MS.gene064108	PPI
MS.gene017412	MS.gene048193	PPI
MS.gene017412	MS.gene87562	PPI
MS.gene017412	MS.gene58722	PPI
MS.gene017412	MS.gene016220	PPI
MS.gene017412	MS.gene024008	PPI
MS.gene017412	MS.gene50337	PPI
MS.gene017412	MS.gene063670	PPI
MS.gene017412	MS.gene50306	PPI
MS.gene017412	MS.gene041393	PPI
MS.gene017412	MS.gene69309	PPI
MS.gene017412	MS.gene053299	PPI
MS.gene017412	MS.gene064111	PPI
MS.gene017412	MS.gene034690	PPI
MS.gene51202	MS.gene017412	PPI
MS.gene017412	MS.gene57531	PPI
MS.gene017412	MS.gene58240	PPI
MS.gene017412	MS.gene27284	PPI
MS.gene017412	MS.gene96448	PPI
MS.gene017412	MS.gene019503	PPI
MS.gene017412	MS.gene57717	PPI
MS.gene017412	MS.gene48221	PPI
MS.gene041491	MS.gene017412	PPI
MS.gene017412	MS.gene51190	PPI
MS.gene017412	MS.gene041470	PPI
MS.gene017412	MS.gene58319	PPI
MS.gene017412	MS.gene009883	PPI
MS.gene017412	MS.gene71159	PPI
MS.gene017412	MS.gene58785	PPI
MS.gene017412	MS.gene044426	PPI
MS.gene017412	MS.gene034681	PPI
MS.gene017412	MS.gene033441	PPI
MS.gene059096	MS.gene017412	PPI
MS.gene017412	MS.gene57532	PPI
MS.gene017412	MS.gene033442	PPI
MS.gene017412	MS.gene019506	PPI
MS.gene017412	MS.gene060366	PPI
MS.gene017412	MS.gene57535	PPI
MS.gene017412	MS.gene87559	PPI
MS.gene017412	MS.gene44428	PPI
MS.gene43796	MS.gene017412	PPI
MS.gene034690	MS.gene017412	PPI
MS.gene017412	MS.gene058669	PPI
MS.gene017412	MS.gene066120	PPI
MS.gene017412	MS.gene063826	PPI
MS.gene017412	MS.gene035235	PPI
MS.gene017412	MS.gene033432	PPI
MS.gene017412	MS.gene041489	PPI
MS.gene017412	MS.gene57528	PPI
MS.gene017412	MS.gene045476	PPI
MS.gene017412	MS.gene87588	PPI
MS.gene017412	MS.gene024000	PPI
MS.gene017412	MS.gene012215	PPI
MS.gene017412	MS.gene43796	PPI
MS.gene017412	MS.gene31637	PPI
MS.gene017412	MS.gene033079	PPI
MS.gene017412	MS.gene034677	PPI
MS.gene50298	MS.gene017412	PPI
MS.gene017412	MS.gene055694	PPI
MS.gene017412	MS.gene059101	PPI
MS.gene017412	MS.gene033444	PPI
MS.gene017412	MS.gene035236	PPI
MS.gene017412	MS.gene58316	PPI
MS.gene017412	MS.gene033430	PPI
MS.gene017412	MS.gene87584	PPI
MS.gene017412	MS.gene58321	PPI
MS.gene017412	MS.gene016524	PPI
MS.gene017412	MS.gene87564	PPI
MS.gene017412	MS.gene58315	PPI
MS.gene017412	MS.gene011679	PPI
MS.gene017412	MS.gene90743	PPI
MS.gene017412	MS.gene50311	PPI
MS.gene017412	MS.gene85454	PPI
MS.gene017412	MS.gene064112	PPI
MS.gene017412	MS.gene036556	PPI
MS.gene031591	MS.gene017412	PPI
MS.gene017412	MS.gene57538	PPI
MS.gene017412	MS.gene060367	PPI
MS.gene017412	MS.gene058693	PPI
MS.gene017412	MS.gene27319	PPI
MS.gene017412	MS.gene64001	PPI
MS.gene017412	MS.gene006711	PPI
MS.gene017412	MS.gene041395	PPI
MS.gene017412	MS.gene57536	PPI
MS.gene017412	MS.gene50307	PPI
MS.gene017412	MS.gene51200	PPI
MS.gene017412	MS.gene066641	PPI
MS.gene017412	MS.gene44887	PPI
MS.gene017412	MS.gene24286	PPI
MS.gene017412	MS.gene064083	PPI
MS.gene017412	MS.gene066635	PPI
MS.gene017412	MS.gene90744	PPI
MS.gene017412	MS.gene58312	PPI
MS.gene017412	MS.gene58783	PPI
MS.gene017412	MS.gene82082	PPI
MS.gene017412	MS.gene024420	PPI
MS.gene017412	MS.gene57533	PPI
MS.gene017412	MS.gene44885	PPI
MS.gene017412	MS.gene036760	PPI
MS.gene017412	MS.gene40988	PPI
MS.gene017412	MS.gene27283	PPI
MS.gene017412	MS.gene54541	PPI
MS.gene017412	MS.gene39265	PPI
MS.gene017412	MS.gene24173	PPI
MS.gene017412	MS.gene036584	PPI
MS.gene017412	MS.gene036662	PPI
MS.gene017412	MS.gene060368	PPI
MS.gene017412	MS.gene58311	PPI
MS.gene063826	MS.gene017412	PPI
MS.gene017412	MS.gene000035	PPI
MS.gene017412	MS.gene28758	PPI
MS.gene017412	MS.gene044429	PPI
MS.gene017412	MS.gene42451	PPI
MS.gene44892	MS.gene017412	PPI
MS.gene017412	MS.gene066620	PPI
MS.gene017412	MS.gene50304	PPI
MS.gene017412	MS.gene041388	PPI
MS.gene017412	MS.gene070461	PPI
MS.gene017412	MS.gene063414	PPI
MS.gene017412	MS.gene69307	PPI
MS.gene000038	MS.gene017412	PPI
MS.gene064111	MS.gene017412	PPI
MS.gene017412	MS.gene036581	PPI
MS.gene017412	MS.gene019507	PPI
MS.gene017412	MS.gene033431	PPI
MS.gene017412	MS.gene51204	PPI
MS.gene017412	MS.gene058692	PPI
MS.gene017412	MS.gene034762	PPI
MS.gene017412	MS.gene59943	PPI
MS.gene017412	MS.gene50320	PPI
MS.gene017412	MS.gene58314	PPI
MS.gene017412	MS.gene87557	PPI
MS.gene017412	MS.gene67501	PPI
MS.gene006710	MS.gene017412	PPI
MS.gene017412	MS.gene96406	PPI
MS.gene017412	MS.gene27285	PPI
MS.gene58722	MS.gene017412	PPI
MS.gene017412	MS.gene035262	PPI
MS.gene017412	MS.gene77857	PPI
MS.gene017412	MS.gene028390	PPI
MS.gene017412	MS.gene40878	PPI
MS.gene017412	MS.gene96407	PPI
MS.gene017412	MS.gene058694	PPI
MS.gene017412	MS.gene069075	PPI
MS.gene017412	MS.gene051820	PPI
MS.gene017412	MS.gene064091	PPI
MS.gene017412	MS.gene058703	PPI
MS.gene017412	MS.gene50329	PPI
MS.gene017412	MS.gene047279	PPI
MS.gene017412	MS.gene060370	PPI
MS.gene017412	MS.gene024002	PPI
MS.gene017412	MS.gene032969	PPI
MS.gene58313	MS.gene017412	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene017412.t1	MTR_1g068860	49.362	235	100	4	15	242	27	249	1.28e-59	193
MS.gene017412.t1	MTR_2g026010	51.046	239	94	7	15	241	27	254	1.23e-58	191
MS.gene017412.t1	MTR_1g068875	48.511	235	99	6	15	242	27	246	4.32e-57	186
MS.gene017412.t1	MTR_2g031700	48.936	235	98	7	15	243	29	247	1.97e-55	180
MS.gene017412.t1	MTR_1g068835	44.400	250	116	7	2	242	12	247	1.45e-54	180
MS.gene017412.t1	MTR_2g028110	50.638	235	95	9	15	237	27	252	2.26e-54	179
MS.gene017412.t1	MTR_2g024110	47.768	224	98	6	16	234	28	237	1.17e-52	175
MS.gene017412.t1	MTR_2g031720	48.770	244	99	9	15	245	29	259	1.58e-52	175
MS.gene017412.t1	MTR_2g031640	48.918	231	97	8	15	238	29	245	5.17e-52	174
MS.gene017412.t1	MTR_2g031680	50.893	224	90	8	15	233	29	237	8.47e-50	168
MS.gene017412.t1	MTR_2g426060	47.368	247	104	10	15	242	29	268	3.96e-49	167
MS.gene017412.t1	MTR_2g426090	46.748	246	98	11	15	237	29	264	4.31e-49	167
MS.gene017412.t1	MTR_0667s0010	45.000	240	113	6	15	242	29	261	8.32e-49	166
MS.gene017412.t1	MTR_2g028130	43.825	251	111	6	15	242	28	271	3.79e-48	164
MS.gene017412.t1	MTR_8g099460	46.414	237	105	7	15	237	28	256	7.05e-47	160
MS.gene017412.t1	MTR_4g006270	47.788	226	83	9	14	235	26	220	4.17e-46	159
MS.gene017412.t1	MTR_2g425980	44.167	240	107	8	15	235	28	259	1.35e-44	155
MS.gene017412.t1	MTR_2g024100	44.664	253	114	9	15	249	30	274	2.02e-43	151
MS.gene017412.t1	MTR_2g426070	41.935	248	111	8	15	237	29	268	3.23e-43	151
MS.gene017412.t1	MTR_2g028160	42.292	253	112	9	15	241	28	272	3.65e-41	146
MS.gene017412.t1	MTR_2g025420	42.966	263	117	11	15	251	29	284	4.78e-41	145
MS.gene017412.t1	MTR_2g426020	44.538	238	101	10	16	232	30	257	2.71e-40	143
MS.gene017412.t1	MTR_1g068905	44.715	246	94	11	1	234	8	223	4.16e-40	140
MS.gene017412.t1	MTR_2g021050	42.616	237	102	6	15	242	28	239	4.79e-40	142
MS.gene017412.t1	MTR_4g133170	40.000	250	117	10	15	249	27	258	6.05e-40	142
MS.gene017412.t1	MTR_3g083010	42.915	247	103	10	15	232	29	266	1.82e-39	141
MS.gene017412.t1	MTR_2g028140	40.143	279	120	12	1	242	9	277	2.19e-38	139
MS.gene017412.t1	MTR_4g070550	39.313	262	126	10	5	242	19	271	1.01e-35	131
MS.gene017412.t1	MTR_2g040050	40.323	186	74	4	54	234	16	169	5.17e-34	123
MS.gene017412.t1	MTR_2g025960	42.373	177	77	6	77	237	3	170	4.26e-30	114
MS.gene017412.t1	MTR_2g022170	59.406	101	36	2	16	116	28	123	6.69e-30	109
MS.gene017412.t1	MTR_7g110360	44.311	167	63	6	2	147	47	204	8.21e-27	106
MS.gene017412.t1	MTR_3g086970	44.751	181	70	12	18	193	14	169	3.53e-23	92.8
MS.gene017412.t1	MTR_5g083940	40.000	205	67	9	15	218	27	176	2.61e-22	94.0
MS.gene017412.t1	MTR_6g007150	31.053	190	105	8	52	233	45	216	1.04e-17	81.3
MS.gene017412.t1	MTR_3g007360	30.870	230	132	9	17	232	77	293	5.74e-17	79.7
MS.gene017412.t1	MTR_3g007410	31.624	234	125	12	17	232	77	293	1.80e-16	78.6
MS.gene017412.t1	MTR_7g013590	28.319	226	144	7	16	233	60	275	4.17e-16	77.4
MS.gene017412.t1	MTR_4g061340	28.676	272	142	13	6	250	40	286	1.31e-15	75.9
MS.gene017412.t1	MTR_6g021880	28.936	235	137	11	17	233	45	267	2.24e-14	72.4
MS.gene017412.t1	MTR_2g437190	47.619	84	39	1	34	117	56	134	5.46e-14	68.2
MS.gene017412.t1	MTR_8g013010	31.325	166	96	5	62	224	134	284	7.64e-14	70.1
MS.gene017412.t1	MTR_3g007330	27.419	248	134	10	6	233	62	283	2.39e-13	69.3
MS.gene017412.t1	MTR_4g055060	28.191	188	116	9	59	240	108	282	4.87e-13	68.2
MS.gene017412.t1	MTR_6g017295	27.228	202	126	7	62	249	24	218	1.55e-12	67.0
MS.gene017412.t1	MTR_7g028660	27.203	261	151	11	1	233	15	264	2.01e-12	66.6
MS.gene017412.t1	MTR_8g073550	32.258	155	91	6	18	172	74	214	3.43e-12	64.7
MS.gene017412.t1	MTR_3g009300	30.049	203	107	11	55	247	78	255	5.48e-12	65.1
MS.gene017412.t1	MTR_7g009265	26.829	205	124	9	62	249	14	209	5.71e-12	65.1
MS.gene017412.t1	MTR_6g060650	28.662	157	94	5	80	233	113	254	6.69e-12	65.1
MS.gene017412.t1	MTR_5g096630	24.014	279	157	11	9	246	35	299	7.52e-12	65.1
MS.gene017412.t1	MTR_2g078900	29.114	237	126	14	17	237	58	268	1.00e-11	64.3
MS.gene017412.t1	MTR_6g017280	24.016	254	169	8	6	241	23	270	1.06e-11	64.3
MS.gene017412.t1	MTR_3g006670	28.682	258	141	12	1	233	53	292	1.32e-11	64.3
MS.gene017412.t1	MTR_6g065980	28.099	242	133	11	17	246	41	253	1.44e-11	63.9
MS.gene017412.t1	MTR_4g094365	30.055	183	107	7	53	232	77	241	1.49e-11	63.9
MS.gene017412.t1	MTR_4g117720	30.625	160	94	6	77	233	108	253	1.72e-11	63.9
MS.gene017412.t1	MTR_5g057790	28.902	173	99	8	78	244	141	295	1.93e-11	63.5
MS.gene017412.t1	MTR_3g036290	28.177	181	107	5	72	252	112	269	2.22e-11	63.5
MS.gene017412.t1	MTR_2g021190	25.379	264	154	9	1	241	25	268	2.32e-11	63.5
MS.gene017412.t1	MTR_5g070080	31.953	169	88	8	77	238	122	270	2.43e-11	63.2
MS.gene017412.t1	MTR_2g021800	24.057	212	132	6	61	249	110	315	2.71e-11	63.2
MS.gene017412.t1	MTR_3g010390	27.935	247	138	12	17	240	58	287	3.61e-11	62.8
MS.gene017412.t1	MTR_1g050542	28.750	160	91	6	77	233	146	285	3.65e-11	62.8
MS.gene017412.t1	MTR_2g046900	28.689	244	145	9	16	244	52	281	4.56e-11	62.4
MS.gene017412.t1	MTR_0044s0300	28.390	236	134	12	17	237	63	278	4.83e-11	62.4
MS.gene017412.t1	MTR_3g007270	23.140	242	147	5	17	233	72	299	4.93e-11	62.4
MS.gene017412.t1	MTR_3g009240	29.870	231	135	11	17	236	61	275	4.94e-11	62.4
MS.gene017412.t1	MTR_1g056710	27.320	194	111	8	48	235	106	275	5.42e-11	62.4
MS.gene017412.t1	MTR_7g079370	28.070	171	96	7	77	233	80	237	5.89e-11	62.0
MS.gene017412.t1	MTR_2g055970	21.827	197	131	7	42	233	268	446	6.24e-11	62.4
MS.gene017412.t1	MTR_3g103020	30.000	180	104	6	59	233	95	257	6.37e-11	62.0
MS.gene017412.t1	MTR_1g054725	27.778	198	115	10	59	248	99	276	7.58e-11	62.0
MS.gene017412.t1	MTR_3g009260	30.000	230	133	9	16	236	65	275	8.29e-11	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 59 sgRNAs with CRISPR-Local

Find 71 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAATGGAAAGTGCGGAATTT+TGG	0.222712	5.3:-63499828	None:intergenic
GCCCAAGGGAGATAGCTTTC+TGG	0.304482	5.3:+63499661	MS.gene017412:CDS
ATCCCATTGTTAACTATCTC+TGG	0.352257	5.3:-63500074	None:intergenic
CGGACTGACAATCACGGCTT+TGG	0.362133	5.3:+63499750	MS.gene017412:CDS
TTAAAGCTATCAAAGGCTTT+CGG	0.371129	5.3:+63499730	MS.gene017412:CDS
CATCCTCCACTGCGACTTGT+TGG	0.372552	5.3:+63499503	MS.gene017412:CDS
TGGTTCCGAATTCTATTCAT+TGG	0.373212	5.3:+63499946	MS.gene017412:CDS
TCAATGCGGGTGGTTAGGTT+AGG	0.384640	5.3:-63499546	None:intergenic
TGTAGCACAGTAACAACTTT+CGG	0.386867	5.3:-63499978	None:intergenic
GAAGTTGTGAGAATCGATTA+AGG	0.402280	5.3:-63499442	None:intergenic
TGAGATTGATGTTGCGGGTT+TGG	0.412060	5.3:+63500114	MS.gene017412:CDS
GTAACGGCCTCCTATGCATC+TGG	0.426532	5.3:+63499622	MS.gene017412:CDS
AGAGTTCAATGCGGGTGGTT+AGG	0.429364	5.3:-63499551	None:intergenic
TGCTCTCGTGAACATGCTGT+TGG	0.433568	5.3:+63499918	MS.gene017412:CDS
CAAAGAATGTACGGTATACT+AGG	0.441953	5.3:-63499897	None:intergenic
CGTTGAAAATCTCTGATGTA+AGG	0.449881	5.3:-63500040	None:intergenic
ACTACCCAATGAATAGAATT+CGG	0.452487	5.3:-63499951	None:intergenic
ATCTGGAACAGCGCATCCTC+AGG	0.453519	5.3:+63499639	MS.gene017412:CDS
AGGAAGTTCTTTCCACGAGT+TGG	0.458276	5.3:-63499877	None:intergenic
GGTTCCGAATTCTATTCATT+GGG	0.464089	5.3:+63499947	MS.gene017412:CDS
GATAGATGAAACAGGCGATC+AGG	0.464122	5.3:-63499806	None:intergenic
TTCCAGAAAGCTATCTCCCT+TGG	0.464256	5.3:-63499663	None:intergenic
TTAGGTTAGGGAAATCAGTT+AGG	0.466993	5.3:-63499533	None:intergenic
TCCAGAAAGCTATCTCCCTT+GGG	0.468449	5.3:-63499662	None:intergenic
AGTCTTGAGATTGATGTTGC+GGG	0.476568	5.3:+63500109	MS.gene017412:CDS
CAATGCGGGTGGTTAGGTTA+GGG	0.482838	5.3:-63499545	None:intergenic
TGCTATTCCGGCATCATCAT+CGG	0.487303	5.3:+63499594	MS.gene017412:CDS
TTCCAGAGATAGTTAACAAT+GGG	0.491210	5.3:+63500072	MS.gene017412:CDS
TAGTCTTGAGATTGATGTTG+CGG	0.501149	5.3:+63500108	MS.gene017412:CDS
ATCATCATCGGTTCATGTAA+CGG	0.515543	5.3:+63499606	MS.gene017412:CDS
CGCTGTTCCAGATGCATAGG+AGG	0.523722	5.3:-63499629	None:intergenic
TAACAATGGGATCAACAGTC+AGG	0.526421	5.3:+63500085	MS.gene017412:CDS
ACAGCGCATCCTCAGGCCCA+AGG	0.527360	5.3:+63499646	MS.gene017412:CDS
AGCTATCTCCCTTGGGCCTG+AGG	0.530930	5.3:-63499655	None:intergenic
ATCAGATGTTTACGAATGCA+AGG	0.531061	5.3:-63499687	None:intergenic
ACAAGTCGCAGTGGAGGATG+AGG	0.547634	5.3:-63499500	None:intergenic
TGAAGAGATTCACCGCTGAA+TGG	0.548546	5.3:-63499845	None:intergenic
TTGTTAACTATCTCTGGAAG+AGG	0.557342	5.3:-63500068	None:intergenic
GCAAAATGTCTTCAAAGGAA+AGG	0.562983	5.3:-63499574	None:intergenic
GGCTTTCGGACTGACAATCA+CGG	0.563854	5.3:+63499744	MS.gene017412:CDS
GAATAGCAAAATGTCTTCAA+AGG	0.578195	5.3:-63499579	None:intergenic
ATGCGCTGTTCCAGATGCAT+AGG	0.580360	5.3:-63499632	None:intergenic
CAGCGCATCCTCAGGCCCAA+GGG	0.581489	5.3:+63499647	MS.gene017412:CDS
TTGTTACTGTGCTACACGAA+TGG	0.583228	5.3:+63499985	MS.gene017412:CDS
ACATGAACCGATGATGATGC+CGG	0.590052	5.3:-63499601	None:intergenic
CTTCCAGAGATAGTTAACAA+TGG	0.590304	5.3:+63500071	MS.gene017412:CDS
ATTCCGCACTTTCCATTCAG+CGG	0.597094	5.3:+63499833	MS.gene017412:CDS
AGGAAAGGAGAGTTCAATGC+GGG	0.600130	5.3:-63499559	None:intergenic
TATTTGTAATCCCTTGTGAA+CGG	0.608286	5.3:-63499780	None:intergenic
TCACGAGAGCAAAGAATGTA+CGG	0.610205	5.3:-63499906	None:intergenic
TCAGATGTTTACGAATGCAA+GGG	0.615712	5.3:-63499686	None:intergenic
TCAGCTTAGAATCCAACTCG+TGG	0.634753	5.3:+63499865	MS.gene017412:CDS
TGTTAACTATCTCTGGAAGA+GGG	0.634979	5.3:-63500067	None:intergenic
AATCCAACAAGTCGCAGTGG+AGG	0.639968	5.3:-63499506	None:intergenic
AAAGGAGAGTTCAATGCGGG+TGG	0.649345	5.3:-63499556	None:intergenic
TCACCGCTGAATGGAAAGTG+CGG	0.658866	5.3:-63499836	None:intergenic
AGAAATCCAACAAGTCGCAG+TGG	0.679191	5.3:-63499509	None:intergenic
TTAAATGCAAGTATTAAACG+CGG	0.786455	5.3:-63500017	None:intergenic
AAGGAAAGGAGAGTTCAATG+CGG	0.797340	5.3:-63499560	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TTAAATGCAAGTATTAAACG+CGG	-	chr5.3:63500020-63500039	None:intergenic	25.0%
	ACTACCCAATGAATAGAATT+CGG	-	chr5.3:63499954-63499973	None:intergenic	30.0%
	GAATAGCAAAATGTCTTCAA+AGG	-	chr5.3:63499582-63499601	None:intergenic	30.0%
	TATTTGTAATCCCTTGTGAA+CGG	-	chr5.3:63499783-63499802	None:intergenic	30.0%
	TTAAAGCTATCAAAGGCTTT+CGG	+	chr5.3:63499730-63499749	MS.gene017412:CDS	30.0%
	TTCCAGAGATAGTTAACAAT+GGG	+	chr5.3:63500072-63500091	MS.gene017412:CDS	30.0%
!	GAATTTTGGATAGATGAAAC+AGG	-	chr5.3:63499817-63499836	None:intergenic	30.0%
!	TGAAGTTGAGTGAATTTTTG+AGG	-	chr5.3:63499479-63499498	None:intergenic	30.0%
!!	CCTTTGATAGCTTTAAAAAG+TGG	-	chr5.3:63499726-63499745	None:intergenic	30.0%
!!	TTGATAGCTTTAAAAAGTGG+AGG	-	chr5.3:63499723-63499742	None:intergenic	30.0%
!!!	CCACTTTTTAAAGCTATCAA+AGG	+	chr5.3:63499723-63499742	MS.gene017412:CDS	30.0%
!!!	TTGAAGACATTTTGCTATTC+CGG	+	chr5.3:63499582-63499601	MS.gene017412:CDS	30.0%
	ATCAGATGTTTACGAATGCA+AGG	-	chr5.3:63499690-63499709	None:intergenic	35.0%
	ATCCCATTGTTAACTATCTC+TGG	-	chr5.3:63500077-63500096	None:intergenic	35.0%
	CAAAGAATGTACGGTATACT+AGG	-	chr5.3:63499900-63499919	None:intergenic	35.0%
	CGTTGAAAATCTCTGATGTA+AGG	-	chr5.3:63500043-63500062	None:intergenic	35.0%
	CTTCCAGAGATAGTTAACAA+TGG	+	chr5.3:63500071-63500090	MS.gene017412:CDS	35.0%
	GAAGTTGTGAGAATCGATTA+AGG	-	chr5.3:63499445-63499464	None:intergenic	35.0%
	GCAAAATGTCTTCAAAGGAA+AGG	-	chr5.3:63499577-63499596	None:intergenic	35.0%
	GGTTCCGAATTCTATTCATT+GGG	+	chr5.3:63499947-63499966	MS.gene017412:CDS	35.0%
	TCAGATGTTTACGAATGCAA+GGG	-	chr5.3:63499689-63499708	None:intergenic	35.0%
	TGGTTCCGAATTCTATTCAT+TGG	+	chr5.3:63499946-63499965	MS.gene017412:CDS	35.0%
	TGTAGCACAGTAACAACTTT+CGG	-	chr5.3:63499981-63500000	None:intergenic	35.0%
	TTAGGTTAGGGAAATCAGTT+AGG	-	chr5.3:63499536-63499555	None:intergenic	35.0%
!	CTTTAAAAAGTGGAGGTCTA+GGG	-	chr5.3:63499716-63499735	None:intergenic	35.0%
!	TACATCAGAGATTTTCAACG+AGG	+	chr5.3:63500043-63500062	MS.gene017412:CDS	35.0%
!	TAGTCTTGAGATTGATGTTG+CGG	+	chr5.3:63500108-63500127	MS.gene017412:CDS	35.0%
!	TGTTAACTATCTCTGGAAGA+GGG	-	chr5.3:63500070-63500089	None:intergenic	35.0%
!	TTGTTAACTATCTCTGGAAG+AGG	-	chr5.3:63500071-63500090	None:intergenic	35.0%
!!	ATCATCATCGGTTCATGTAA+CGG	+	chr5.3:63499606-63499625	MS.gene017412:CDS	35.0%
	AAGGAAAGGAGAGTTCAATG+CGG	-	chr5.3:63499563-63499582	None:intergenic	40.0%
	AGTCTTGAGATTGATGTTGC+GGG	+	chr5.3:63500109-63500128	MS.gene017412:CDS	40.0%
	TAACAATGGGATCAACAGTC+AGG	+	chr5.3:63500085-63500104	MS.gene017412:CDS	40.0%
	TCACGAGAGCAAAGAATGTA+CGG	-	chr5.3:63499909-63499928	None:intergenic	40.0%
	TTGTTACTGTGCTACACGAA+TGG	+	chr5.3:63499985-63500004	MS.gene017412:CDS	40.0%
!!	GAATGGAAAGTGCGGAATTT+TGG	-	chr5.3:63499831-63499850	None:intergenic	40.0%
!!	GCTTTAAAAAGTGGAGGTCT+AGG	-	chr5.3:63499717-63499736	None:intergenic	40.0%
!!!	TGAACATGCTGTTGGCTTTT+TGG	+	chr5.3:63499926-63499945	MS.gene017412:CDS	40.0%
!!!	TGGTTTTGATCCGTTCACAA+GGG	+	chr5.3:63499770-63499789	MS.gene017412:CDS	40.0%
!!!	TTGGTTTTGATCCGTTCACA+AGG	+	chr5.3:63499769-63499788	MS.gene017412:CDS	40.0%
	AGAAATCCAACAAGTCGCAG+TGG	-	chr5.3:63499512-63499531	None:intergenic	45.0%
	AGGAAAGGAGAGTTCAATGC+GGG	-	chr5.3:63499562-63499581	None:intergenic	45.0%
	AGGAAGTTCTTTCCACGAGT+TGG	-	chr5.3:63499880-63499899	None:intergenic	45.0%
	ATTCCGCACTTTCCATTCAG+CGG	+	chr5.3:63499833-63499852	MS.gene017412:CDS	45.0%
	GATAGATGAAACAGGCGATC+AGG	-	chr5.3:63499809-63499828	None:intergenic	45.0%
	TCAGCTTAGAATCCAACTCG+TGG	+	chr5.3:63499865-63499884	MS.gene017412:CDS	45.0%
	TCCAGAAAGCTATCTCCCTT+GGG	-	chr5.3:63499665-63499684	None:intergenic	45.0%
	TGAAGAGATTCACCGCTGAA+TGG	-	chr5.3:63499848-63499867	None:intergenic	45.0%
	TGAGATTGATGTTGCGGGTT+TGG	+	chr5.3:63500114-63500133	MS.gene017412:CDS	45.0%
	TGCTATTCCGGCATCATCAT+CGG	+	chr5.3:63499594-63499613	MS.gene017412:CDS	45.0%
	TTCCAGAAAGCTATCTCCCT+TGG	-	chr5.3:63499666-63499685	None:intergenic	45.0%
!	ACATGAACCGATGATGATGC+CGG	-	chr5.3:63499604-63499623	None:intergenic	45.0%
	AAAGGAGAGTTCAATGCGGG+TGG	-	chr5.3:63499559-63499578	None:intergenic	50.0%
	AATCCAACAAGTCGCAGTGG+AGG	-	chr5.3:63499509-63499528	None:intergenic	50.0%
	AGAGTTCAATGCGGGTGGTT+AGG	-	chr5.3:63499554-63499573	None:intergenic	50.0%
	ATGCGCTGTTCCAGATGCAT+AGG	-	chr5.3:63499635-63499654	None:intergenic	50.0%
	CAATGCGGGTGGTTAGGTTA+GGG	-	chr5.3:63499548-63499567	None:intergenic	50.0%
	GGCTTTCGGACTGACAATCA+CGG	+	chr5.3:63499744-63499763	MS.gene017412:CDS	50.0%
	TCAATGCGGGTGGTTAGGTT+AGG	-	chr5.3:63499549-63499568	None:intergenic	50.0%
	TCACCGCTGAATGGAAAGTG+CGG	-	chr5.3:63499839-63499858	None:intergenic	50.0%
	TGCTCTCGTGAACATGCTGT+TGG	+	chr5.3:63499918-63499937	MS.gene017412:CDS	50.0%
	ACAAGTCGCAGTGGAGGATG+AGG	-	chr5.3:63499503-63499522	None:intergenic	55.0%
	CATCCTCCACTGCGACTTGT+TGG	+	chr5.3:63499503-63499522	MS.gene017412:CDS	55.0%
	CGCTGTTCCAGATGCATAGG+AGG	-	chr5.3:63499632-63499651	None:intergenic	55.0%
	CGGACTGACAATCACGGCTT+TGG	+	chr5.3:63499750-63499769	MS.gene017412:CDS	55.0%
	GCCCAAGGGAGATAGCTTTC+TGG	+	chr5.3:63499661-63499680	MS.gene017412:CDS	55.0%
	GTAACGGCCTCCTATGCATC+TGG	+	chr5.3:63499622-63499641	MS.gene017412:CDS	55.0%
!	ATCTGGAACAGCGCATCCTC+AGG	+	chr5.3:63499639-63499658	MS.gene017412:CDS	55.0%
	AGCTATCTCCCTTGGGCCTG+AGG	-	chr5.3:63499658-63499677	None:intergenic	60.0%
	ACAGCGCATCCTCAGGCCCA+AGG	+	chr5.3:63499646-63499665	MS.gene017412:CDS	65.0%
	CAGCGCATCCTCAGGCCCAA+GGG	+	chr5.3:63499647-63499666	MS.gene017412:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.3	gene	63499381	63500139	63499381	ID=MS.gene017412
chr5.3	mRNA	63499381	63500139	63499381	ID=MS.gene017412.t1;Parent=MS.gene017412
chr5.3	exon	63499381	63500139	63499381	ID=MS.gene017412.t1.exon1;Parent=MS.gene017412.t1
chr5.3	CDS	63499381	63500139	63499381	ID=cds.MS.gene017412.t1;Parent=MS.gene017412.t1

Gene Sequence

>MS.gene017412

ATGATTGTTAGTATTATTAGTATTTTGAAGCTGATTTTCTTAACTTCAAAATCACTTAAATCCTTAATCGATTCTCACAACTTCATCAATCTTCACCTCAAAAATTCACTCAACTTCAACCTCATCCTCCACTGCGACTTGTTGGATTTCTACCTAACTGATTTCCCTAACCTAACCACCCGCATTGAACTCTCCTTTCCTTTGAAGACATTTTGCTATTCCGGCATCATCATCGGTTCATGTAACGGCCTCCTATGCATCTGGAACAGCGCATCCTCAGGCCCAAGGGAGATAGCTTTCTGGAACCCTTGCATTCGTAAACATCTGATTCTCCCTAGACCTCCACTTTTTAAAGCTATCAAAGGCTTTCGGACTGACAATCACGGCTTTGGTTTTGATCCGTTCACAAGGGATTACAAATATGTCCTGATCGCCTGTTTCATCTATCCAAAATTCCGCACTTTCCATTCAGCGGTGAATCTCTTCAGCTTAGAATCCAACTCGTGGAAAGAACTTCCTAGTATACCGTACATTCTTTGCTCTCGTGAACATGCTGTTGGCTTTTTGGTTCCGAATTCTATTCATTGGGTAGTTAATCCGAAAGTTGTTACTGTGCTACACGAATGGAAGTATCAGCCGCGTTTAATACTTGCATTTAACCTTACATCAGAGATTTTCAACGAGGTCCCTCTTCCAGAGATAGTTAACAATGGGATCAACAGTCAGGTAGTCTTGAGATTGATGTTGCGGGTTTGGTAG

Protein sequence

>MS.gene017412.t1

MIVSIISILKLIFLTSKSLKSLIDSHNFINLHLKNSLNFNLILHCDLLDFYLTDFPNLTTRIELSFPLKTFCYSGIIIGSCNGLLCIWNSASSGPREIAFWNPCIRKHLILPRPPLFKAIKGFRTDNHGFGFDPFTRDYKYVLIACFIYPKFRTFHSAVNLFSLESNSWKELPSIPYILCSREHAVGFLVPNSIHWVVNPKVVTVLHEWKYQPRLILAFNLTSEIFNEVPLPEIVNNGINSQVVLRLMLRVW