AlfalfaGEDB | MS.gene019505

M. sativa cultivar XinJiangDaYe / MS.gene019505

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene019505.t1	RHN40013.1	72.2	180	41	5	2	177	217	391	9.40E-62	246.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene019505.t1	Q8GXC7	29.4	160	97	5	24	174	267	419	2.7e-09	63.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene019505.t1	G7LCP4	72.2	180	41	5	2	177	196	370	6.8e-62	246.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene019505	MS.gene063670	PPI
MS.gene69309	MS.gene019505	PPI
MS.gene019505	MS.gene51191	PPI
MS.gene019505	MS.gene40902	PPI
MS.gene034686	MS.gene019505	PPI
MS.gene019505	MS.gene57531	PPI
MS.gene019505	MS.gene58240	PPI
MS.gene019505	MS.gene27284	PPI
MS.gene019505	MS.gene96448	PPI
MS.gene019505	MS.gene063472	PPI
MS.gene019505	MS.gene57717	PPI
MS.gene019505	MS.gene034680	PPI
MS.gene019505	MS.gene31587	PPI
MS.gene019505	MS.gene27021	PPI
MS.gene019505	MS.gene48221	PPI
MS.gene019505	MS.gene044563	PPI
MS.gene019505	MS.gene50327	PPI
MS.gene019505	MS.gene066626	PPI
MS.gene019505	MS.gene50339	PPI
MS.gene019505	MS.gene063474	PPI
MS.gene019505	MS.gene51190	PPI
MS.gene051820	MS.gene019505	PPI
MS.gene019505	MS.gene42452	PPI
MS.gene019505	MS.gene58785	PPI
MS.gene019505	MS.gene044426	PPI
MS.gene019505	MS.gene88416	PPI
MS.gene019505	MS.gene034681	PPI
MS.gene81242	MS.gene019505	PPI
MS.gene27283	MS.gene019505	PPI
MS.gene019505	MS.gene57532	PPI
MS.gene019505	MS.gene003076	PPI
MS.gene019505	MS.gene033442	PPI
MS.gene019505	MS.gene009892	PPI
MS.gene51202	MS.gene019505	PPI
MS.gene87562	MS.gene019505	PPI
MS.gene019505	MS.gene058669	PPI
MS.gene019505	MS.gene066120	PPI
MS.gene019505	MS.gene51192	PPI
MS.gene019505	MS.gene041489	PPI
MS.gene019505	MS.gene40986	PPI
MS.gene019505	MS.gene045476	PPI
MS.gene064104	MS.gene019505	PPI
MS.gene019505	MS.gene36704	PPI
MS.gene019505	MS.gene034688	PPI
MS.gene019505	MS.gene58239	PPI
MS.gene019505	MS.gene24213	PPI
MS.gene019505	MS.gene31637	PPI
MS.gene019505	MS.gene033079	PPI
MS.gene019505	MS.gene034677	PPI
MS.gene019505	MS.gene055694	PPI
MS.gene019505	MS.gene035238	PPI
MS.gene019505	MS.gene035236	PPI
MS.gene019505	MS.gene064114	PPI
MS.gene064091	MS.gene019505	PPI
MS.gene019505	MS.gene87584	PPI
MS.gene019505	MS.gene87563	PPI
MS.gene045476	MS.gene019505	PPI
MS.gene019505	MS.gene26829	PPI
MS.gene019505	MS.gene58315	PPI
MS.gene43796	MS.gene019505	PPI
MS.gene019505	MS.gene80610	PPI
MS.gene019505	MS.gene90743	PPI
MS.gene019505	MS.gene053256	PPI
MS.gene019505	MS.gene85454	PPI
MS.gene019505	MS.gene064112	PPI
MS.gene019505	MS.gene041391	PPI
MS.gene019505	MS.gene033443	PPI
MS.gene019505	MS.gene060367	PPI
MS.gene019505	MS.gene036583	PPI
MS.gene019505	MS.gene006711	PPI
MS.gene019505	MS.gene57536	PPI
MS.gene019505	MS.gene50307	PPI
MS.gene019505	MS.gene51200	PPI
MS.gene019505	MS.gene066641	PPI
MS.gene019505	MS.gene021553	PPI
MS.gene019505	MS.gene011106	PPI
MS.gene019505	MS.gene44887	PPI
MS.gene019505	MS.gene058701	PPI
MS.gene019505	MS.gene87554	PPI
MS.gene019505	MS.gene009891	PPI
MS.gene019505	MS.gene064083	PPI
MS.gene019505	MS.gene048193	PPI
MS.gene019505	MS.gene58312	PPI
MS.gene019505	MS.gene58783	PPI
MS.gene019505	MS.gene024420	PPI
MS.gene019505	MS.gene57533	PPI
MS.gene019505	MS.gene024008	PPI
MS.gene019505	MS.gene50337	PPI
MS.gene019505	MS.gene54541	PPI
MS.gene019505	MS.gene39265	PPI
MS.gene019505	MS.gene50306	PPI
MS.gene019505	MS.gene041393	PPI
MS.gene019505	MS.gene060368	PPI
MS.gene031591	MS.gene019505	PPI
MS.gene019505	MS.gene053299	PPI
MS.gene019505	MS.gene28758	PPI
MS.gene019505	MS.gene044429	PPI
MS.gene019505	MS.gene42451	PPI
MS.gene019505	MS.gene50304	PPI
MS.gene019505	MS.gene041388	PPI
MS.gene019505	MS.gene019503	PPI
MS.gene87559	MS.gene019505	PPI
MS.gene019505	MS.gene033431	PPI
MS.gene019505	MS.gene041470	PPI
MS.gene019505	MS.gene58319	PPI
MS.gene019505	MS.gene034762	PPI
MS.gene019505	MS.gene71159	PPI
MS.gene019505	MS.gene59943	PPI
MS.gene019505	MS.gene033441	PPI
MS.gene063826	MS.gene019505	PPI
MS.gene019505	MS.gene035262	PPI
MS.gene44892	MS.gene019505	PPI
MS.gene019505	MS.gene060366	PPI
MS.gene019505	MS.gene028390	PPI
MS.gene019505	MS.gene40878	PPI
MS.gene019505	MS.gene44428	PPI
MS.gene019505	MS.gene96407	PPI
MS.gene019505	MS.gene058694	PPI
MS.gene019505	MS.gene051820	PPI
MS.gene000038	MS.gene019505	PPI
MS.gene019505	MS.gene035235	PPI
MS.gene064111	MS.gene019505	PPI
MS.gene019505	MS.gene058703	PPI
MS.gene019505	MS.gene033432	PPI
MS.gene019505	MS.gene50329	PPI
MS.gene019505	MS.gene57528	PPI
MS.gene26829	MS.gene019505	PPI
MS.gene019505	MS.gene024000	PPI
MS.gene025887	MS.gene019505	PPI
MS.gene019505	MS.gene012215	PPI
MS.gene75875	MS.gene019505	PPI
MS.gene041470	MS.gene019505	PPI
MS.gene019505	MS.gene041392	PPI
MS.gene019505	MS.gene50297	PPI
MS.gene019505	MS.gene059101	PPI
MS.gene019505	MS.gene22715	PPI
MS.gene019505	MS.gene033444	PPI
MS.gene006710	MS.gene019505	PPI
MS.gene019505	MS.gene58316	PPI
MS.gene019505	MS.gene033430	PPI
MS.gene58722	MS.gene019505	PPI
MS.gene019505	MS.gene58321	PPI
MS.gene011679	MS.gene019505	PPI
MS.gene019505	MS.gene016524	PPI
MS.gene019505	MS.gene87564	PPI
MS.gene019505	MS.gene36595	PPI
MS.gene019505	MS.gene024004	PPI
MS.gene019505	MS.gene045140	PPI
MS.gene019505	MS.gene061240	PPI
MS.gene019505	MS.gene041473	PPI
MS.gene77856	MS.gene019505	PPI
MS.gene019505	MS.gene50311	PPI
MS.gene019505	MS.gene88780	PPI
MS.gene58313	MS.gene019505	PPI
MS.gene019505	MS.gene058989	PPI
MS.gene019505	MS.gene50326	PPI
MS.gene019505	MS.gene036556	PPI
MS.gene019505	MS.gene57538	PPI
MS.gene019505	MS.gene041468	PPI
MS.gene066622	MS.gene019505	PPI
MS.gene019505	MS.gene058693	PPI
MS.gene019505	MS.gene27319	PPI
MS.gene019505	MS.gene64001	PPI
MS.gene019505	MS.gene015089	PPI
MS.gene44883	MS.gene019505	PPI
MS.gene019505	MS.gene041395	PPI
MS.gene019505	MS.gene42447	PPI
MS.gene019505	MS.gene51189	PPI
MS.gene019505	MS.gene43789	PPI
MS.gene41046	MS.gene019505	PPI
MS.gene87588	MS.gene019505	PPI
MS.gene017412	MS.gene019505	PPI
MS.gene57529	MS.gene019505	PPI
MS.gene019505	MS.gene046958	PPI
MS.gene019505	MS.gene24286	PPI
MS.gene019505	MS.gene066635	PPI
MS.gene80884	MS.gene019505	PPI
MS.gene019505	MS.gene044425	PPI
MS.gene019505	MS.gene90744	PPI
MS.gene009883	MS.gene019505	PPI
MS.gene019505	MS.gene036760	PPI
MS.gene019505	MS.gene40988	PPI
MS.gene019505	MS.gene27283	PPI
MS.gene033427	MS.gene019505	PPI
MS.gene019505	MS.gene81242	PPI
MS.gene019505	MS.gene24173	PPI
MS.gene019505	MS.gene036584	PPI
MS.gene019505	MS.gene036662	PPI
MS.gene041474	MS.gene019505	PPI
MS.gene019505	MS.gene88776	PPI
MS.gene27020	MS.gene019505	PPI
MS.gene066620	MS.gene019505	PPI
MS.gene035236	MS.gene019505	PPI
MS.gene019505	MS.gene035261	PPI
MS.gene019505	MS.gene041390	PPI
MS.gene019505	MS.gene023999	PPI
MS.gene019505	MS.gene070461	PPI
MS.gene96126	MS.gene019505	PPI
MS.gene019505	MS.gene69307	PPI
MS.gene016524	MS.gene019505	PPI
MS.gene019505	MS.gene59639	PPI
MS.gene019505	MS.gene036581	PPI
MS.gene019505	MS.gene019507	PPI
MS.gene35068	MS.gene019505	PPI
MS.gene90744	MS.gene019505	PPI
MS.gene51204	MS.gene019505	PPI
MS.gene019505	MS.gene058692	PPI
MS.gene019505	MS.gene000036	PPI
MS.gene019505	MS.gene44886	PPI
MS.gene036557	MS.gene019505	PPI
MS.gene019505	MS.gene50320	PPI
MS.gene019505	MS.gene58314	PPI
MS.gene019505	MS.gene87557	PPI
MS.gene019505	MS.gene059156	PPI
MS.gene019505	MS.gene51199	PPI
MS.gene019505	MS.gene035263	PPI
MS.gene019505	MS.gene67501	PPI
MS.gene019505	MS.gene96406	PPI
MS.gene019505	MS.gene27285	PPI
MS.gene059156	MS.gene019505	PPI
MS.gene019505	MS.gene77858	PPI
MS.gene019505	MS.gene51201	PPI
MS.gene84698	MS.gene019505	PPI
MS.gene019505	MS.gene77857	PPI
MS.gene019505	MS.gene50336	PPI
MS.gene019505	MS.gene57526	PPI
MS.gene019505	MS.gene87586	PPI
MS.gene019505	MS.gene069075	PPI
MS.gene82082	MS.gene019505	PPI
MS.gene019505	MS.gene77704	PPI
MS.gene019505	MS.gene064091	PPI
MS.gene019505	MS.gene047279	PPI
MS.gene019505	MS.gene060370	PPI
MS.gene019505	MS.gene50305	PPI
MS.gene019505	MS.gene024002	PPI
MS.gene57535	MS.gene019505	PPI
MS.gene019505	MS.gene032969	PPI
MS.gene019505	MS.gene75875	PPI
MS.gene019505	MS.gene68890	PPI
MS.gene019505	MS.gene42445	PPI
MS.gene019505	MS.gene86273	PPI
MS.gene033432	MS.gene019505	PPI
MS.gene019505	MS.gene26830	PPI
MS.gene019505	MS.gene40985	PPI
MS.gene019505	MS.gene072177	PPI
MS.gene019505	MS.gene038756	PPI
MS.gene019505	MS.gene92376	PPI
MS.gene019505	MS.gene51207	PPI
MS.gene019505	MS.gene63657	PPI
MS.gene44885	MS.gene019505	PPI
MS.gene019505	MS.gene059157	PPI
MS.gene019505	MS.gene023996	PPI
MS.gene019505	MS.gene57527	PPI
MS.gene019505	MS.gene58716	PPI
MS.gene019505	MS.gene50301	PPI
MS.gene019505	MS.gene070462	PPI
MS.gene019505	MS.gene54049	PPI
MS.gene019505	MS.gene036582	PPI
MS.gene010758	MS.gene019505	PPI
MS.gene019505	MS.gene031590	PPI
MS.gene87586	MS.gene019505	PPI
MS.gene019505	MS.gene033427	PPI
MS.gene019505	MS.gene066623	PPI
MS.gene019505	MS.gene064086	PPI
MS.gene019505	MS.gene035234	PPI
MS.gene019505	MS.gene064090	PPI
MS.gene019505	MS.gene034686	PPI
MS.gene019505	MS.gene90742	PPI
MS.gene019505	MS.gene41046	PPI
MS.gene019505	MS.gene24212	PPI
MS.gene019505	MS.gene066639	PPI
MS.gene019505	MS.gene50332	PPI
MS.gene019505	MS.gene77856	PPI
MS.gene019505	MS.gene024979	PPI
MS.gene019505	MS.gene041475	PPI
MS.gene019505	MS.gene64203	PPI
MS.gene42452	MS.gene019505	PPI
MS.gene063414	MS.gene019505	PPI
MS.gene019505	MS.gene24826	PPI
MS.gene019505	MS.gene40904	PPI
MS.gene019505	MS.gene43790	PPI
MS.gene019505	MS.gene032970	PPI
MS.gene019505	MS.gene57537	PPI
MS.gene019505	MS.gene51208	PPI
MS.gene40902	MS.gene019505	PPI
MS.gene019505	MS.gene064104	PPI
MS.gene019505	MS.gene40982	PPI
MS.gene019505	MS.gene59637	PPI
MS.gene019505	MS.gene033426	PPI
MS.gene26957	MS.gene019505	PPI
MS.gene019505	MS.gene27022	PPI
MS.gene019505	MS.gene57530	PPI
MS.gene036582	MS.gene019505	PPI
MS.gene58320	MS.gene019505	PPI
MS.gene019505	MS.gene97996	PPI
MS.gene019505	MS.gene87585	PPI
MS.gene019505	MS.gene024009	PPI
MS.gene019505	MS.gene036599	PPI
MS.gene019505	MS.gene40887	PPI
MS.gene019505	MS.gene87200	PPI
MS.gene58781	MS.gene019505	PPI
MS.gene019505	MS.gene42444	PPI
MS.gene019505	MS.gene67687	PPI
MS.gene019505	MS.gene62398	PPI
MS.gene019505	MS.gene26101	PPI
MS.gene011106	MS.gene019505	PPI
MS.gene019505	MS.gene006705	PPI
MS.gene019505	MS.gene80884	PPI
MS.gene44886	MS.gene019505	PPI
MS.gene019505	MS.gene061241	PPI
MS.gene019505	MS.gene035237	PPI
MS.gene019505	MS.gene51188	PPI
MS.gene019505	MS.gene033875	PPI
MS.gene000035	MS.gene019505	PPI
MS.gene019505	MS.gene38220	PPI
MS.gene019505	MS.gene50309	PPI
MS.gene87569	MS.gene019505	PPI
MS.gene87573	MS.gene019505	PPI
MS.gene019505	MS.gene041394	PPI
MS.gene041491	MS.gene019505	PPI
MS.gene019505	MS.gene03060	PPI
MS.gene019505	MS.gene033440	PPI
MS.gene019505	MS.gene036664	PPI
MS.gene019504	MS.gene019505	PPI
MS.gene019505	MS.gene024011	PPI
MS.gene019505	MS.gene053257	PPI
MS.gene019505	MS.gene58241	PPI
MS.gene019505	MS.gene010758	PPI
MS.gene059096	MS.gene019505	PPI
MS.gene019505	MS.gene064109	PPI
MS.gene019505	MS.gene058696	PPI
MS.gene019505	MS.gene009893	PPI
MS.gene019505	MS.gene045475	PPI
MS.gene019505	MS.gene63655	PPI
MS.gene019505	MS.gene39262	PPI
MS.gene019505	MS.gene85043	PPI
MS.gene019505	MS.gene062698	PPI
MS.gene019505	MS.gene58320	PPI
MS.gene034690	MS.gene019505	PPI
MS.gene26949	MS.gene019505	PPI
MS.gene019505	MS.gene033083	PPI
MS.gene036760	MS.gene019505	PPI
MS.gene019505	MS.gene63658	PPI
MS.gene019505	MS.gene40886	PPI
MS.gene58311	MS.gene019505	PPI
MS.gene019505	MS.gene60027	PPI
MS.gene019505	MS.gene033081	PPI
MS.gene019505	MS.gene036663	PPI
MS.gene019505	MS.gene68580	PPI
MS.gene019505	MS.gene57525	PPI
MS.gene59639	MS.gene019505	PPI
MS.gene50298	MS.gene019505	PPI
MS.gene019505	MS.gene030114	PPI
MS.gene019505	MS.gene045473	PPI
MS.gene019505	MS.gene88774	PPI
MS.gene019505	MS.gene045474	PPI
MS.gene019505	MS.gene036558	PPI
MS.gene019505	MS.gene041474	PPI
MS.gene019505	MS.gene27051	PPI
MS.gene019505	MS.gene40984	PPI
MS.gene019506	MS.gene019505	PPI
MS.gene50326	MS.gene019505	PPI
MS.gene019505	MS.gene064108	PPI
MS.gene019505	MS.gene87562	PPI
MS.gene019505	MS.gene016220	PPI
MS.gene019505	MS.gene24208	PPI
MS.gene019505	MS.gene58317	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene019505.t1	MTR_8g433030	72.222	180	41	5	2	177	163	337	2.09e-78	237
MS.gene019505.t1	MTR_8g032390	72.222	180	41	5	2	177	196	370	4.23e-78	237
MS.gene019505.t1	MTR_8g433040	68.478	184	41	3	2	182	195	364	4.96e-78	237
MS.gene019505.t1	MTR_8g032380	68.478	184	41	3	2	182	195	364	4.96e-78	237
MS.gene019505.t1	MTR_3g103020	55.263	190	69	6	2	182	196	378	7.65e-60	191
MS.gene019505.t1	MTR_6g060650	54.011	187	69	6	2	181	196	372	3.63e-57	184
MS.gene019505.t1	MTR_4g117720	55.385	195	63	9	2	182	194	378	6.49e-55	178
MS.gene019505.t1	MTR_4g109280	50.794	189	76	6	2	182	180	359	9.40e-53	172
MS.gene019505.t1	MTR_4g116330	51.323	189	77	5	2	182	199	380	1.64e-51	169
MS.gene019505.t1	MTR_4g122850	55.801	181	66	7	9	182	191	364	4.79e-51	168
MS.gene019505.t1	MTR_4g109270	54.491	167	64	5	23	182	203	364	5.00e-51	167
MS.gene019505.t1	MTR_6g463430	52.174	184	78	6	2	182	26	202	6.99e-51	162
MS.gene019505.t1	MTR_8g040935	48.969	194	79	6	1	182	23	208	1.01e-50	162
MS.gene019505.t1	MTR_4g094365	53.191	188	74	6	2	182	184	364	1.30e-50	167
MS.gene019505.t1	MTR_3g034180	49.231	195	74	8	2	182	306	489	5.31e-50	168
MS.gene019505.t1	MTR_4g116320	51.087	184	77	5	1	178	78	254	2.74e-49	160
MS.gene019505.t1	MTR_4g021785	50.538	186	81	6	1	182	177	355	6.05e-49	162
MS.gene019505.t1	MTR_4g023070	48.731	197	76	6	2	181	181	369	4.75e-48	160
MS.gene019505.t1	MTR_4g023130	49.730	185	79	6	2	181	137	312	6.11e-48	158
MS.gene019505.t1	MTR_4g023080	48.649	185	81	6	2	181	178	353	6.58e-47	157
MS.gene019505.t1	MTR_4g118380	53.571	168	54	6	2	155	198	355	1.02e-46	156
MS.gene019505.t1	MTR_4g117850	50.000	186	80	6	1	178	195	375	1.21e-46	157
MS.gene019505.t1	MTR_4g023120	47.475	198	79	6	2	182	181	370	3.15e-46	155
MS.gene019505.t1	MTR_1g055175	48.969	194	73	6	2	181	19	200	4.40e-46	150
MS.gene019505.t1	MTR_3g034160	50.521	192	74	6	2	181	192	374	1.20e-45	154
MS.gene019505.t1	MTR_4g023090	47.525	202	76	8	2	182	194	386	8.73e-45	152
MS.gene019505.t1	MTR_5g097210	55.901	161	54	5	27	179	209	360	2.03e-44	151
MS.gene019505.t1	MTR_4g023380	48.000	200	68	8	15	182	184	379	1.17e-43	149
MS.gene019505.t1	MTR_1g055135	49.479	192	82	6	1	182	189	375	2.05e-43	148
MS.gene019505.t1	MTR_3g034130	53.061	147	56	4	12	154	209	346	7.51e-43	147
MS.gene019505.t1	MTR_4g023200	47.872	188	80	7	2	180	180	358	1.28e-41	143
MS.gene019505.t1	MTR_1g055165	52.174	161	66	4	28	182	163	318	3.08e-41	141
MS.gene019505.t1	MTR_4g023190	47.872	188	79	7	2	180	180	357	6.72e-41	141
MS.gene019505.t1	MTR_1g055195	48.454	194	71	10	2	178	293	474	1.38e-39	140
MS.gene019505.t1	MTR_4g023150	47.872	188	80	7	2	180	180	358	1.46e-39	138
MS.gene019505.t1	MTR_1g055250	47.727	176	76	6	1	169	87	253	2.08e-38	134
MS.gene019505.t1	MTR_4g118400	48.087	183	66	8	1	176	134	294	7.89e-38	132
MS.gene019505.t1	MTR_4g118370	45.263	190	64	7	1	179	97	257	1.67e-37	130
MS.gene019505.t1	MTR_5g070130	46.667	195	85	9	2	182	188	377	2.18e-36	130
MS.gene019505.t1	MTR_7g079400	44.560	193	89	6	2	182	151	337	5.21e-36	128
MS.gene019505.t1	MTR_4g117780	45.789	190	88	7	2	182	184	367	6.53e-36	128
MS.gene019505.t1	MTR_5g070080	48.810	168	74	6	22	182	224	386	7.92e-36	129
MS.gene019505.t1	MTR_4g117770	46.486	185	80	7	13	182	187	367	1.73e-33	122
MS.gene019505.t1	MTR_4g117810	46.486	185	80	7	13	182	187	367	1.73e-33	122
MS.gene019505.t1	MTR_4g117870	51.538	130	55	3	58	182	141	267	2.34e-33	119
MS.gene019505.t1	MTR_8g102520	41.667	180	92	5	10	182	149	322	2.07e-32	118
MS.gene019505.t1	MTR_4g118360	51.163	129	51	4	61	181	1	125	2.11e-31	110
MS.gene019505.t1	MTR_4g117750	45.226	199	79	8	1	181	172	358	3.00e-31	118
MS.gene019505.t1	MTR_4g117750	54.386	114	38	4	76	180	373	481	1.45e-29	113
MS.gene019505.t1	MTR_7g079370	42.077	183	91	7	2	176	175	350	5.92e-31	115
MS.gene019505.t1	MTR_5g070088	46.626	163	73	7	29	182	229	386	6.09e-30	113
MS.gene019505.t1	MTR_7g079420	40.107	187	97	7	5	182	964	1144	2.43e-29	114
MS.gene019505.t1	MTR_4g117530	40.107	187	66	7	2	182	107	253	6.70e-29	107
MS.gene019505.t1	MTR_4g121580	46.939	147	47	6	4	149	200	316	1.76e-28	109
MS.gene019505.t1	MTR_5g023000	59.140	93	32	2	96	182	7	99	3.05e-27	99.0
MS.gene019505.t1	MTR_4g023440	38.919	185	64	4	2	182	193	332	3.35e-27	105
MS.gene019505.t1	MTR_7g079450	43.357	143	70	4	45	182	1	137	2.63e-26	97.8
MS.gene019505.t1	MTR_4g116330	38.095	189	63	5	2	182	199	341	2.87e-26	102
MS.gene019505.t1	MTR_4g122860	38.462	182	67	6	16	182	169	320	3.08e-26	102
MS.gene019505.t1	MTR_8g098830	41.611	149	70	6	10	151	54	192	1.38e-23	93.6
MS.gene019505.t1	MTR_2g048580	32.620	187	108	7	2	182	168	342	3.25e-19	83.6
MS.gene019505.t1	MTR_4g117430	50.588	85	34	5	2	85	75	152	4.33e-16	72.0
MS.gene019505.t1	MTR_8g013010	50.000	84	33	3	2	85	235	309	9.21e-16	73.9
MS.gene019505.t1	MTR_2g426020	29.762	168	101	6	25	178	218	382	3.42e-14	69.7
MS.gene019505.t1	MTR_4g023430	39.623	106	53	3	86	182	119	222	1.52e-13	66.6
MS.gene019505.t1	MTR_7g117720	51.724	87	30	4	101	176	186	271	2.70e-13	66.6
MS.gene019505.t1	MTR_4g114700	42.268	97	47	3	86	173	122	218	3.35e-13	65.9
MS.gene019505.t1	MTR_2g028110	28.729	181	111	7	8	181	197	366	4.43e-11	60.8
MS.gene019505.t1	MTR_5g057790	32.143	140	81	5	23	155	243	375	8.17e-11	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene019505.t1	AT3G06240	27.647	170	117	2	9	174	252	419	4.09e-12	63.9

Find 46 sgRNAs with CRISPR-Local

Find 50 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATTGTTGTCTTTGATTTAA+TGG	0.084690	8.1:-69773415	MS.gene019505:CDS
GGAATAGGAACTTTCATAAT+TGG	0.168463	8.1:-69773299	MS.gene019505:CDS
GATTATGGTTTGTGGGTATT+TGG	0.208731	8.1:-69773339	MS.gene019505:CDS
GGAAATCGACAGTTGAAATA+TGG	0.217300	8.1:-69773278	MS.gene019505:CDS
AAAGCAGGATTATTCTTTAA+TGG	0.228597	8.1:-69773489	MS.gene019505:CDS
AAGCAGGATTATTCTTTAAT+GGG	0.287791	8.1:-69773488	MS.gene019505:CDS
TTGGAGAATTTCTCAGTCTA+TGG	0.288501	8.1:-69773320	MS.gene019505:CDS
TAATCCTGCTTTGGAAGCTT+TGG	0.296435	8.1:+69773500	None:intergenic
GACCATGATCCTGTGGATTA+TGG	0.306412	8.1:-69773354	MS.gene019505:CDS
ATCTGAAGTGGCCATTTATA+CGG	0.348367	8.1:-69773070	MS.gene019505:CDS
AATCCTGCTTTGGAAGCTTT+GGG	0.358664	8.1:+69773501	None:intergenic
TCTTTAATGGGGATATTCAT+TGG	0.368049	8.1:-69773476	MS.gene019505:CDS
ATTAAAGAATAATCCTGCTT+TGG	0.391144	8.1:+69773491	None:intergenic
AAGCAGAGATTCCGTATAAA+TGG	0.404097	8.1:+69773059	None:intergenic
AATTTCTCAGTCTATGGAAT+AGG	0.433887	8.1:-69773314	MS.gene019505:CDS
GGATCATGGTCAAAATCATC+TGG	0.436812	8.1:+69773366	None:intergenic
CATCTTGTTAAACTTGTTCA+CGG	0.438416	8.1:+69773022	None:intergenic
TCCTGTGGATTATGGTTTGT+GGG	0.455259	8.1:-69773346	MS.gene019505:CDS
ATCCTGTGGATTATGGTTTG+TGG	0.458998	8.1:-69773347	MS.gene019505:CDS
GAAATCGACAGTTGAAATAT+GGG	0.469274	8.1:-69773277	MS.gene019505:CDS
TATAGGGGAAAAGAACATAA+TGG	0.470496	8.1:+69773200	None:intergenic
TATCCCAAAGCTTCCAAAGC+AGG	0.472312	8.1:-69773504	MS.gene019505:CDS
TAATGGGGATATTCATTGGT+TGG	0.487283	8.1:-69773472	MS.gene019505:CDS
ATGGCCACTTCAGATGCATT+CGG	0.499630	8.1:+69773078	None:intergenic
TAAACTTGTTCACGGTCACC+AGG	0.501824	8.1:+69773030	None:intergenic
AATACAAACAACATTCGTCT+TGG	0.505881	8.1:-69773245	MS.gene019505:CDS
AGTTGAAATATGGGTGATGA+AGG	0.512041	8.1:-69773268	MS.gene019505:CDS
GAATCTCTGCTTTCACTCCC+TGG	0.518981	8.1:-69773048	MS.gene019505:CDS
GGGGAAAAGAACATAATGGT+AGG	0.526109	8.1:+69773204	None:intergenic
TTGTCTTTGATTTAATGGAA+AGG	0.526787	8.1:-69773410	MS.gene019505:CDS
AACCATAATCCACAGGATCA+TGG	0.536939	8.1:+69773352	None:intergenic
AGCAGGATTATTCTTTAATG+GGG	0.562885	8.1:-69773487	MS.gene019505:CDS
TGGTCAAAATCATCTGGAAG+AGG	0.566442	8.1:+69773372	None:intergenic
AATATGTGGAATGAAATTGT+AGG	0.570086	8.1:-69773558	MS.gene019505:CDS
CATCACTTATTTGAATACCA+CGG	0.570605	8.1:-69773529	MS.gene019505:CDS
GGGAAAAGAACATAATGGTA+GGG	0.570690	8.1:+69773205	None:intergenic
AACTGACGGTGATCGTGGAT+TGG	0.582084	8.1:-69773148	MS.gene019505:CDS
GGAAGCTTTGGGATAATCCG+TGG	0.585102	8.1:+69773512	None:intergenic
ACCCACAAACCATAATCCAC+AGG	0.594022	8.1:+69773345	None:intergenic
GAATCCGAATGCATCTGAAG+TGG	0.598471	8.1:-69773082	MS.gene019505:CDS
GGTAGGGATTACAAGAGACT+TGG	0.600714	8.1:+69773221	None:intergenic
GTTGGAACTGACGGTGATCG+TGG	0.645956	8.1:-69773153	MS.gene019505:CDS
GGTGATATTGTTGGAACTGA+CGG	0.665403	8.1:-69773162	MS.gene019505:CDS
AAACTTGTTCACGGTCACCA+GGG	0.678032	8.1:+69773031	None:intergenic
TTATTATCATGATATACGAG+TGG	0.685713	8.1:-69773442	MS.gene019505:CDS
GTATTCAAATAAGTGATGTG+AGG	0.692775	8.1:+69773534	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATTGTTGTCTTTGATTTAA+TGG	-	chr8.1:69773169-69773188	MS.gene019505:CDS	20.0%
!	AAAGCAGGATTATTCTTTAA+TGG	-	chr8.1:69773095-69773114	MS.gene019505:CDS	25.0%
!	AAGCAGGATTATTCTTTAAT+GGG	-	chr8.1:69773096-69773115	MS.gene019505:CDS	25.0%
!	ATTAAAGAATAATCCTGCTT+TGG	+	chr8.1:69773096-69773115	None:intergenic	25.0%
!	TTATTATCATGATATACGAG+TGG	-	chr8.1:69773142-69773161	MS.gene019505:CDS	25.0%
!!	ACTTTTTGTAGAGTATATAG+GGG	+	chr8.1:69773402-69773421	None:intergenic	25.0%
!!	TTGTCTTTGATTTAATGGAA+AGG	-	chr8.1:69773174-69773193	MS.gene019505:CDS	25.0%
!!!	CACTTTTTGTAGAGTATATA+GGG	+	chr8.1:69773403-69773422	None:intergenic	25.0%
	AATACAAACAACATTCGTCT+TGG	-	chr8.1:69773339-69773358	MS.gene019505:CDS	30.0%
	AATTTCTCAGTCTATGGAAT+AGG	-	chr8.1:69773270-69773289	MS.gene019505:CDS	30.0%
	ACAAAAAGTGGTGATATTGT+TGG	-	chr8.1:69773413-69773432	MS.gene019505:CDS	30.0%
	AGCAGGATTATTCTTTAATG+GGG	-	chr8.1:69773097-69773116	MS.gene019505:CDS	30.0%
	CATCACTTATTTGAATACCA+CGG	-	chr8.1:69773055-69773074	MS.gene019505:CDS	30.0%
	CCTATATACTCTACAAAAAG+TGG	-	chr8.1:69773401-69773420	MS.gene019505:CDS	30.0%
	GAAATCGACAGTTGAAATAT+GGG	-	chr8.1:69773307-69773326	MS.gene019505:CDS	30.0%
	GGAATAGGAACTTTCATAAT+TGG	-	chr8.1:69773285-69773304	MS.gene019505:CDS	30.0%
	GTATTCAAATAAGTGATGTG+AGG	+	chr8.1:69773053-69773072	None:intergenic	30.0%
	TATAGGGGAAAAGAACATAA+TGG	+	chr8.1:69773387-69773406	None:intergenic	30.0%
	TCTTTAATGGGGATATTCAT+TGG	-	chr8.1:69773108-69773127	MS.gene019505:CDS	30.0%
!!!	CCACTTTTTGTAGAGTATAT+AGG	+	chr8.1:69773404-69773423	None:intergenic	30.0%
	AAGCAGAGATTCCGTATAAA+TGG	+	chr8.1:69773528-69773547	None:intergenic	35.0%
	AGTTGAAATATGGGTGATGA+AGG	-	chr8.1:69773316-69773335	MS.gene019505:CDS	35.0%
	GGAAATCGACAGTTGAAATA+TGG	-	chr8.1:69773306-69773325	MS.gene019505:CDS	35.0%
	GGGAAAAGAACATAATGGTA+GGG	+	chr8.1:69773382-69773401	None:intergenic	35.0%
	TAATGGGGATATTCATTGGT+TGG	-	chr8.1:69773112-69773131	MS.gene019505:CDS	35.0%
	TTGGAGAATTTCTCAGTCTA+TGG	-	chr8.1:69773264-69773283	MS.gene019505:CDS	35.0%
!	ATCTGAAGTGGCCATTTATA+CGG	-	chr8.1:69773514-69773533	MS.gene019505:CDS	35.0%
!	GATTATGGTTTGTGGGTATT+TGG	-	chr8.1:69773245-69773264	MS.gene019505:CDS	35.0%
	AACCATAATCCACAGGATCA+TGG	+	chr8.1:69773235-69773254	None:intergenic	40.0%
	GGATCATGGTCAAAATCATC+TGG	+	chr8.1:69773221-69773240	None:intergenic	40.0%
	GGGGAAAAGAACATAATGGT+AGG	+	chr8.1:69773383-69773402	None:intergenic	40.0%
	GGTGATATTGTTGGAACTGA+CGG	-	chr8.1:69773422-69773441	MS.gene019505:CDS	40.0%
	TGGTCAAAATCATCTGGAAG+AGG	+	chr8.1:69773215-69773234	None:intergenic	40.0%
!	ATCCTGTGGATTATGGTTTG+TGG	-	chr8.1:69773237-69773256	MS.gene019505:CDS	40.0%
!	TCCTGTGGATTATGGTTTGT+GGG	-	chr8.1:69773238-69773257	MS.gene019505:CDS	40.0%
!!	AATCCTGCTTTGGAAGCTTT+GGG	+	chr8.1:69773086-69773105	None:intergenic	40.0%
!!	TAATCCTGCTTTGGAAGCTT+TGG	+	chr8.1:69773087-69773106	None:intergenic	40.0%
!!	TGATTTTGACCATGATCCTG+TGG	-	chr8.1:69773223-69773242	MS.gene019505:CDS	40.0%
	ACCCACAAACCATAATCCAC+AGG	+	chr8.1:69773242-69773261	None:intergenic	45.0%
	ATGGCCACTTCAGATGCATT+CGG	+	chr8.1:69773509-69773528	None:intergenic	45.0%
	GAATCCGAATGCATCTGAAG+TGG	-	chr8.1:69773502-69773521	MS.gene019505:CDS	45.0%
	GGTAGGGATTACAAGAGACT+TGG	+	chr8.1:69773366-69773385	None:intergenic	45.0%
	TATCCCAAAGCTTCCAAAGC+AGG	-	chr8.1:69773080-69773099	MS.gene019505:CDS	45.0%
!	AAACTTGTTCACGGTCACCA+GGG	+	chr8.1:69773556-69773575	None:intergenic	45.0%
!	GACCATGATCCTGTGGATTA+TGG	-	chr8.1:69773230-69773249	MS.gene019505:CDS	45.0%
!	TAAACTTGTTCACGGTCACC+AGG	+	chr8.1:69773557-69773576	None:intergenic	45.0%
	AACTGACGGTGATCGTGGAT+TGG	-	chr8.1:69773436-69773455	MS.gene019505:CDS	50.0%
	GAATCTCTGCTTTCACTCCC+TGG	-	chr8.1:69773536-69773555	MS.gene019505:CDS	50.0%
!!	GGAAGCTTTGGGATAATCCG+TGG	+	chr8.1:69773075-69773094	None:intergenic	50.0%
	GTTGGAACTGACGGTGATCG+TGG	-	chr8.1:69773431-69773450	MS.gene019505:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	69773029	69773577	69773029	ID=MS.gene019505
chr8.1	mRNA	69773029	69773577	69773029	ID=MS.gene019505.t1;Parent=MS.gene019505
chr8.1	exon	69773029	69773577	69773029	ID=MS.gene019505.t1.exon1;Parent=MS.gene019505.t1
chr8.1	CDS	69773029	69773577	69773029	ID=cds.MS.gene019505.t1;Parent=MS.gene019505.t1

Gene Sequence

>MS.gene019505

ATGTGGAATGAAATTGTAGGTCCTCACATCACTTATTTGAATACCACGGATTATCCCAAAGCTTCCAAAGCAGGATTATTCTTTAATGGGGATATTCATTGGTTGGCATCTCGTTATTATCATGATATACGAGTGGAAGTTATTGTTGTCTTTGATTTAATGGAAAGGAAACTGTTAGAGATACCTCTTCCAGATGATTTTGACCATGATCCTGTGGATTATGGTTTGTGGGTATTTGGAGAATTTCTCAGTCTATGGAATAGGAACTTTCATAATTGGAAATCGACAGTTGAAATATGGGTGATGAAGGAATACAAACAACATTCGTCTTGGACCAAGTCTCTTGTAATCCCTACCATTATGTTCTTTTCCCCTATATACTCTACAAAAAGTGGTGATATTGTTGGAACTGACGGTGATCGTGGATTGGTGAAGTATAATAATAAACGAAAGTCGAAAGAGTATCTCGAAATGAATCCGAATGCATCTGAAGTGGCCATTTATACGGAATCTCTGCTTTCACTCCCTGGTGACCGTGAACAAGTTTAA

Protein sequence

>MS.gene019505.t1

MWNEIVGPHITYLNTTDYPKASKAGLFFNGDIHWLASRYYHDIRVEVIVVFDLMERKLLEIPLPDDFDHDPVDYGLWVFGEFLSLWNRNFHNWKSTVEIWVMKEYKQHSSWTKSLVIPTIMFFSPIYSTKSGDIVGTDGDRGLVKYNNKRKSKEYLEMNPNASEVAIYTESLLSLPGDREQV