AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene024004


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024004.t1 MTR_2g048580 55.155 388 124 10 13 396 1 342 1.51e-130 379
MS.gene024004.t1 MTR_7g079370 57.345 354 132 8 49 396 16 356 3.46e-119 350
MS.gene024004.t1 MTR_7g079420 62.105 285 68 4 115 396 897 1144 1.89e-103 330
MS.gene024004.t1 MTR_7g079400 54.808 312 111 9 96 396 45 337 4.28e-96 291
MS.gene024004.t1 MTR_8g102520 46.530 389 136 11 13 396 1 322 4.88e-90 275
MS.gene024004.t1 MTR_3g034180 41.667 408 183 14 12 396 114 489 1.24e-81 258
MS.gene024004.t1 MTR_3g034130 42.466 365 182 10 15 368 4 351 7.47e-79 248
MS.gene024004.t1 MTR_5g070080 40.534 412 193 14 11 396 1 386 1.07e-78 248
MS.gene024004.t1 MTR_6g060650 44.776 402 173 11 13 395 1 372 9.81e-78 245
MS.gene024004.t1 MTR_5g070088 39.951 408 187 14 15 392 2 381 2.45e-77 244
MS.gene024004.t1 MTR_4g109280 44.359 390 180 14 13 396 1 359 2.81e-77 243
MS.gene024004.t1 MTR_3g103020 41.162 396 191 14 13 396 13 378 1.20e-76 242
MS.gene024004.t1 MTR_5g097210 42.010 388 186 12 13 391 1 358 3.08e-75 238
MS.gene024004.t1 MTR_1g055135 42.092 392 185 15 19 396 12 375 1.37e-74 237
MS.gene024004.t1 MTR_3g034160 41.013 395 200 10 13 395 1 374 4.96e-74 235
MS.gene024004.t1 MTR_4g116330 41.414 396 187 14 14 396 17 380 1.77e-73 234
MS.gene024004.t1 MTR_4g094365 40.513 390 200 11 13 396 1 364 2.13e-73 233
MS.gene024004.t1 MTR_4g023080 41.710 386 177 16 13 389 1 347 2.94e-73 233
MS.gene024004.t1 MTR_4g109270 41.855 399 182 14 13 396 1 364 1.75e-72 231
MS.gene024004.t1 MTR_4g117770 40.609 394 197 11 13 396 1 367 5.28e-72 230
MS.gene024004.t1 MTR_4g117810 40.609 394 197 11 13 396 1 367 5.28e-72 230
MS.gene024004.t1 MTR_4g023070 39.394 396 190 14 20 395 3 368 1.76e-70 226
MS.gene024004.t1 MTR_4g118380 45.067 375 163 12 13 364 1 355 1.91e-70 225
MS.gene024004.t1 MTR_4g023120 39.141 396 191 14 20 395 3 368 1.98e-70 226
MS.gene024004.t1 MTR_5g070130 39.152 401 191 13 13 392 4 372 2.25e-70 226
MS.gene024004.t1 MTR_4g117780 39.340 394 202 12 13 396 1 367 1.62e-69 223
MS.gene024004.t1 MTR_4g117850 41.710 386 176 16 19 389 22 373 1.87e-69 223
MS.gene024004.t1 MTR_4g023090 39.173 411 199 15 8 395 1 383 6.11e-68 220
MS.gene024004.t1 MTR_4g117720 40.150 401 160 17 7 392 38 373 7.78e-68 219
MS.gene024004.t1 MTR_8g433040 38.660 388 196 11 15 396 13 364 1.20e-67 218
MS.gene024004.t1 MTR_8g032380 38.660 388 196 11 15 396 13 364 1.20e-67 218
MS.gene024004.t1 MTR_4g021785 38.281 384 194 13 13 389 1 348 1.05e-63 208
MS.gene024004.t1 MTR_8g032390 39.062 384 181 13 15 392 35 371 1.44e-63 208
MS.gene024004.t1 MTR_4g122850 40.849 377 188 17 31 396 12 364 2.66e-63 207
MS.gene024004.t1 MTR_4g023130 36.979 384 157 12 13 389 1 306 8.88e-62 202
MS.gene024004.t1 MTR_4g117750 40.310 387 183 14 19 391 2 354 6.61e-60 202
MS.gene024004.t1 MTR_4g117750 39.286 140 70 5 266 394 346 481 4.99e-14 73.9
MS.gene024004.t1 MTR_4g116330 38.677 393 163 15 14 396 17 341 1.19e-59 197
MS.gene024004.t1 MTR_4g023380 36.603 418 188 15 9 395 5 376 1.42e-58 195
MS.gene024004.t1 MTR_4g023440 38.000 400 169 16 8 396 1 332 1.92e-58 194
MS.gene024004.t1 MTR_4g023150 36.990 392 205 12 11 394 1 358 3.81e-58 194
MS.gene024004.t1 MTR_4g023190 37.755 392 201 13 11 394 1 357 4.49e-58 193
MS.gene024004.t1 MTR_4g023200 36.990 392 205 12 11 394 1 358 1.14e-54 184
MS.gene024004.t1 MTR_8g013010 42.014 288 139 11 13 297 47 309 4.66e-52 176
MS.gene024004.t1 MTR_5g069120 55.495 182 74 2 31 211 2 177 5.44e-52 172
MS.gene024004.t1 MTR_8g098830 57.738 168 61 5 200 362 32 194 1.28e-50 170
MS.gene024004.t1 MTR_1g055195 39.655 290 137 10 116 396 218 478 9.85e-49 172
MS.gene024004.t1 MTR_4g118400 39.677 310 124 13 96 390 33 294 7.52e-48 165
MS.gene024004.t1 MTR_8g433030 35.156 384 163 14 15 392 35 338 9.65e-48 166
MS.gene024004.t1 MTR_4g117870 39.365 315 132 13 87 396 7 267 5.36e-47 162
MS.gene024004.t1 MTR_7g079450 60.274 146 42 6 256 396 3 137 1.12e-43 149
MS.gene024004.t1 MTR_1g055175 43.939 198 102 5 202 395 8 200 2.34e-42 147
MS.gene024004.t1 MTR_4g118370 40.000 260 119 7 136 393 33 257 3.22e-42 149
MS.gene024004.t1 MTR_4g121580 36.658 371 169 18 13 365 1 323 4.95e-42 152
MS.gene024004.t1 MTR_4g117530 38.077 260 104 10 141 396 47 253 1.05e-35 131
MS.gene024004.t1 MTR_4g116340 36.122 263 119 10 12 260 20 247 3.32e-35 130
MS.gene024004.t1 MTR_6g463430 45.685 197 96 10 202 396 15 202 5.88e-34 125
MS.gene024004.t1 MTR_1g055165 45.342 161 80 4 239 396 163 318 6.49e-34 128
MS.gene024004.t1 MTR_1g055165 35.556 180 96 6 19 184 9 182 1.43e-19 89.0
MS.gene024004.t1 MTR_4g116320 42.273 220 109 10 178 391 46 253 1.19e-33 126
MS.gene024004.t1 MTR_1g055250 41.509 212 104 8 165 369 46 244 6.74e-32 123
MS.gene024004.t1 MTR_4g107820 31.193 327 178 13 20 335 36 326 2.72e-31 123
MS.gene024004.t1 MTR_4g107780 31.193 327 178 13 20 335 36 326 2.72e-31 123
MS.gene024004.t1 MTR_4g107820 31.193 327 178 13 20 335 36 326 3.30e-31 123
MS.gene024004.t1 MTR_4g107780 31.193 327 178 13 20 335 36 326 3.54e-31 123
MS.gene024004.t1 MTR_4g133170 29.450 309 180 14 20 319 4 283 6.85e-31 122
MS.gene024004.t1 MTR_5g057710 27.597 308 188 8 20 320 46 325 2.22e-30 120
MS.gene024004.t1 MTR_3g007360 31.310 313 166 15 23 320 55 333 8.34e-30 119
MS.gene024004.t1 MTR_3g007410 31.310 313 166 16 23 320 55 333 9.30e-30 119
MS.gene024004.t1 MTR_7g117720 40.991 222 87 11 13 226 1 186 5.31e-29 114
MS.gene024004.t1 MTR_7g117720 48.864 88 39 3 309 391 186 272 1.01e-14 74.3
MS.gene024004.t1 MTR_5g057790 27.922 308 187 11 20 320 46 325 1.59e-28 115
MS.gene024004.t1 MTR_3g007330 29.316 307 179 10 20 320 48 322 3.04e-28 114
MS.gene024004.t1 MTR_3g006670 32.258 310 174 11 20 320 49 331 3.25e-28 115
MS.gene024004.t1 MTR_3g036290 29.855 345 189 17 20 352 22 325 4.22e-28 114
MS.gene024004.t1 MTR_8g040935 37.313 201 113 7 203 396 14 208 8.14e-28 109
MS.gene024004.t1 MTR_4g055060 31.410 312 178 14 20 320 30 316 1.21e-27 113
MS.gene024004.t1 MTR_3g009310 29.545 308 182 11 20 320 42 321 3.15e-27 112
MS.gene024004.t1 MTR_4g114700 35.055 271 108 9 124 387 9 218 4.04e-27 108
MS.gene024004.t1 MTR_6g065980 29.276 304 174 13 20 320 16 281 8.37e-27 110
MS.gene024004.t1 MTR_3g009240 30.820 305 178 10 20 320 36 311 9.82e-27 110
MS.gene024004.t1 MTR_4g117430 43.972 141 58 5 136 276 15 134 3.53e-26 103
MS.gene024004.t1 MTR_8g467140 30.267 337 188 15 4 329 20 320 4.06e-26 107
MS.gene024004.t1 MTR_3g014540 31.169 308 179 12 20 320 29 310 4.75e-26 108
MS.gene024004.t1 MTR_2g021150 29.640 361 204 18 1 344 1 328 8.35e-26 107
MS.gene024004.t1 MTR_5g057690 27.303 304 184 11 20 320 46 315 2.13e-25 106
MS.gene024004.t1 MTR_5g011200 26.959 319 178 14 20 319 17 299 2.28e-25 106
MS.gene024004.t1 MTR_4g108820 30.380 316 150 13 19 329 41 291 2.46e-25 105
MS.gene024004.t1 MTR_1g055070 28.777 278 179 11 7 274 36 304 7.21e-25 105
MS.gene024004.t1 MTR_5g057020 26.159 302 185 9 20 320 46 310 1.12e-24 103
MS.gene024004.t1 MTR_1g097560 29.677 310 175 14 20 323 36 308 1.37e-24 104
MS.gene024004.t1 MTR_4g061340 29.653 317 175 12 20 320 26 310 2.39e-24 103
MS.gene024004.t1 MTR_0064s0160 27.143 350 219 13 16 341 38 375 4.71e-24 103
MS.gene024004.t1 MTR_0115s0020 26.887 424 244 18 11 393 1 399 5.18e-24 102
MS.gene024004.t1 MTR_0667s0010 26.646 319 191 11 20 319 6 300 6.46e-24 102
MS.gene024004.t1 MTR_3g007430 29.126 309 177 13 23 320 46 323 6.52e-24 102
MS.gene024004.t1 MTR_7g013590 30.968 310 173 15 23 320 39 319 2.11e-23 101
MS.gene024004.t1 MTR_6g021880 28.818 347 214 16 31 363 31 358 2.66e-23 100
MS.gene024004.t1 MTR_5g007610 28.065 310 193 11 20 319 41 330 2.69e-23 100
MS.gene024004.t1 MTR_2g055970 27.723 404 240 17 5 388 189 560 3.39e-23 102
MS.gene024004.t1 MTR_3g011100 29.582 311 182 15 20 319 235 519 3.86e-23 101
MS.gene024004.t1 MTR_3g013740 29.907 321 178 16 20 320 44 337 4.51e-23 100
MS.gene024004.t1 MTR_3g024150 25.987 304 189 8 23 320 38 311 5.11e-23 99.8
MS.gene024004.t1 MTR_2g046900 30.503 318 187 15 16 323 24 317 6.64e-23 99.8
MS.gene024004.t1 MTR_1g094210 27.177 379 197 16 20 370 57 384 8.42e-23 99.8
MS.gene024004.t1 MTR_1g094210 27.456 397 205 16 20 388 57 398 1.05e-22 99.4
MS.gene024004.t1 MTR_0044s0300 28.076 317 172 14 20 320 38 314 1.13e-22 99.0
MS.gene024004.t1 MTR_3g014570 30.841 321 181 14 20 326 29 322 1.25e-22 98.6
MS.gene024004.t1 MTR_3g036430 26.885 305 171 9 20 324 20 272 1.52e-22 97.8
MS.gene024004.t1 MTR_0242s0060 30.514 331 182 14 19 320 8 319 2.08e-22 98.6
MS.gene024004.t1 MTR_0242s0040 30.514 331 182 14 19 320 8 319 2.08e-22 98.6
MS.gene024004.t1 MTR_3g007270 27.900 319 183 16 20 319 47 337 2.28e-22 98.2
MS.gene024004.t1 MTR_0128s0020 28.483 323 181 12 20 319 18 313 2.40e-22 98.2
MS.gene024004.t1 MTR_2g025420 27.692 325 196 15 20 319 6 316 2.67e-22 98.2
MS.gene024004.t1 MTR_1g068875 26.974 304 195 8 20 319 4 284 3.39e-22 97.4
MS.gene024004.t1 MTR_2g046920 29.524 315 186 14 16 323 20 305 5.01e-22 97.1
MS.gene024004.t1 MTR_3g010870 27.362 307 184 11 20 320 37 310 5.46e-22 97.1
MS.gene024004.t1 MTR_6g027910 29.141 326 196 15 23 333 12 317 7.24e-22 96.7
MS.gene024004.t1 MTR_2g021155 27.815 302 190 10 23 320 39 316 1.23e-21 97.8
MS.gene024004.t1 MTR_7g070440 28.354 328 176 15 19 320 6 300 1.27e-21 95.9
MS.gene024004.t1 MTR_2g425980 28.086 324 187 14 20 319 5 306 1.31e-21 96.3
MS.gene024004.t1 MTR_7g062100 29.907 321 179 12 20 320 24 318 1.63e-21 95.9
MS.gene024004.t1 MTR_2g021190 26.059 307 197 9 20 320 21 303 1.67e-21 95.5
MS.gene024004.t1 MTR_4g118360 42.400 125 63 4 270 390 1 120 1.69e-21 89.7
MS.gene024004.t1 MTR_7g407070 29.781 319 188 16 20 320 32 332 2.01e-21 95.5
MS.gene024004.t1 MTR_1g068835 24.923 325 204 12 20 334 4 298 2.39e-21 95.1
MS.gene024004.t1 MTR_4g102410 26.733 404 243 17 4 366 45 436 3.05e-21 95.5
MS.gene024004.t1 MTR_3g083640 25.962 312 183 10 20 320 55 329 3.31e-21 94.7
MS.gene024004.t1 MTR_1g115160 27.778 306 183 12 19 320 21 292 4.34e-21 94.4
MS.gene024004.t1 MTR_3g013770 29.808 312 182 12 20 320 33 318 5.48e-21 94.0
MS.gene024004.t1 MTR_6g004660 28.213 319 190 11 18 320 14 309 5.54e-21 94.0
MS.gene024004.t1 MTR_3g006530 26.774 310 190 10 20 319 40 322 1.12e-20 93.2
MS.gene024004.t1 MTR_7g056290 29.412 340 164 13 23 320 25 330 1.15e-20 93.6
MS.gene024004.t1 MTR_3g010590 27.742 310 172 14 20 320 39 305 1.48e-20 92.8
MS.gene024004.t1 MTR_2g028130 26.836 354 211 15 20 344 5 339 1.61e-20 92.8
MS.gene024004.t1 MTR_3g023930 25.962 312 168 12 20 320 34 293 2.56e-20 92.0
MS.gene024004.t1 MTR_3g024110 27.213 305 185 11 20 320 101 372 3.40e-20 92.4
MS.gene024004.t1 MTR_2g029990 26.471 306 195 11 21 320 52 333 4.08e-20 91.7
MS.gene024004.t1 MTR_3g011060 28.571 315 186 14 20 319 28 318 4.61e-20 91.3
MS.gene024004.t1 MTR_7g091630 28.443 334 179 13 19 319 31 337 4.69e-20 91.7
MS.gene024004.t1 MTR_7g067680 28.616 318 168 12 20 327 49 317 4.94e-20 91.3
MS.gene024004.t1 MTR_7g070830 27.114 343 189 13 20 320 21 344 6.66e-20 91.3
MS.gene024004.t1 MTR_7g066030 25.721 416 246 15 12 389 13 403 7.26e-20 90.9
MS.gene024004.t1 MTR_2g047832 29.102 323 197 13 16 323 25 330 7.30e-20 91.3
MS.gene024004.t1 MTR_8g062660 26.727 333 188 14 9 319 11 309 7.54e-20 92.0
MS.gene024004.t1 MTR_2g028140 26.627 338 183 18 20 319 5 315 8.67e-20 90.9
MS.gene024004.t1 MTR_3g030240 27.419 310 170 13 20 320 40 303 1.02e-19 90.1
MS.gene024004.t1 MTR_0627s0010 25.714 350 187 15 20 324 38 359 1.07e-19 90.5
MS.gene024004.t1 MTR_3g009260 27.597 308 181 11 20 320 41 313 1.09e-19 90.1
MS.gene024004.t1 MTR_1g050542 26.948 308 185 10 20 321 58 331 1.12e-19 90.5
MS.gene024004.t1 MTR_7g056390 29.714 350 174 14 20 329 18 335 1.92e-19 89.7
MS.gene024004.t1 MTR_7g066010 25.068 367 190 12 12 344 13 328 2.04e-19 89.4
MS.gene024004.t1 MTR_2g426060 26.708 322 193 15 20 319 6 306 2.20e-19 89.7
MS.gene024004.t1 MTR_7g066000 26.724 348 220 13 19 344 24 358 2.29e-19 89.4
MS.gene024004.t1 MTR_5g048160 26.769 325 202 13 20 319 4 317 2.47e-19 89.4
MS.gene024004.t1 MTR_2g024110 23.647 351 225 12 20 354 4 327 2.61e-19 89.0
MS.gene024004.t1 MTR_6g086825 26.253 419 240 19 19 394 69 461 2.97e-19 89.7
MS.gene024004.t1 MTR_2g028160 26.748 329 190 14 20 319 5 311 3.17e-19 89.4
MS.gene024004.t1 MTR_3g030250 24.262 305 191 10 20 320 37 305 3.49e-19 88.6
MS.gene024004.t1 MTR_7g078860 26.393 341 186 11 15 320 4 314 4.43e-19 88.6
MS.gene024004.t1 MTR_2g104340 26.087 414 239 18 14 389 8 392 4.95e-19 88.6
MS.gene024004.t1 MTR_3g030330 26.994 326 178 14 20 329 20 301 7.91e-19 87.4
MS.gene024004.t1 MTR_5g096630 28.000 350 202 15 2 319 3 334 8.91e-19 87.8
MS.gene024004.t1 MTR_1g088120 27.928 333 188 12 19 320 9 320 1.21e-18 87.4
MS.gene024004.t1 MTR_5g023000 46.875 96 45 2 304 396 7 99 1.23e-18 80.9
MS.gene024004.t1 MTR_3g436150 29.154 319 184 14 20 320 32 326 1.40e-18 87.0
MS.gene024004.t1 MTR_3g083010 27.545 334 184 16 20 319 6 315 1.51e-18 87.0
MS.gene024004.t1 MTR_4g013185 26.857 350 182 13 19 320 9 332 1.63e-18 87.0
MS.gene024004.t1 MTR_8g073550 30.288 208 117 7 19 218 29 216 1.79e-18 84.3
MS.gene024004.t1 MTR_1g054575 27.273 308 184 13 20 320 52 326 2.00e-18 87.8
MS.gene024004.t1 MTR_2g078900 25.538 325 169 14 20 320 33 308 2.04e-18 86.3
MS.gene024004.t1 MTR_2g426090 27.070 314 194 13 23 319 9 304 2.06e-18 86.7
MS.gene024004.t1 MTR_6g090180 26.100 341 205 12 14 320 41 368 2.34e-18 86.7
MS.gene024004.t1 MTR_1g056710 29.104 268 149 13 20 274 34 273 2.42e-18 86.3
MS.gene024004.t1 MTR_5g046300 24.359 312 188 13 20 320 4 278 2.49e-18 85.9
MS.gene024004.t1 MTR_5g046290 24.359 312 188 13 20 320 4 278 2.49e-18 85.9
MS.gene024004.t1 MTR_3g010430 25.392 319 191 13 20 324 36 321 2.56e-18 86.7
MS.gene024004.t1 MTR_2g031720 26.984 315 192 15 18 319 4 293 2.79e-18 86.3
MS.gene024004.t1 MTR_6g017280 24.138 319 204 8 20 320 9 307 3.06e-18 85.9
MS.gene024004.t1 MTR_3g010390 27.445 317 195 11 20 320 33 330 3.37e-18 85.9
MS.gene024004.t1 MTR_7g077970 27.356 329 197 11 20 320 7 321 3.78e-18 85.9
MS.gene024004.t1 MTR_5g069930 26.708 322 190 11 19 320 5 300 4.32e-18 85.5
MS.gene024004.t1 MTR_4g109290 35.329 167 66 6 19 184 8 133 4.32e-18 82.0
MS.gene024004.t1 MTR_3g010970 26.623 308 173 13 23 320 51 315 4.63e-18 85.5
MS.gene024004.t1 MTR_3g006570 26.129 310 198 13 20 324 21 304 5.59e-18 85.1
MS.gene024004.t1 MTR_2g028110 26.582 316 188 13 20 319 4 291 5.80e-18 85.1
MS.gene024004.t1 MTR_4g070550 25.225 333 188 17 20 319 5 309 7.80e-18 85.1
MS.gene024004.t1 MTR_3g072470 27.874 348 182 13 20 329 19 335 7.97e-18 85.1
MS.gene024004.t1 MTR_1g097330 28.846 312 176 14 20 320 16 292 8.21e-18 85.1
MS.gene024004.t1 MTR_0760s0010 26.774 310 177 13 25 324 52 321 9.15e-18 84.7
MS.gene024004.t1 MTR_2g046830 27.302 315 193 13 16 323 21 306 1.01e-17 84.7
MS.gene024004.t1 MTR_7g070880 27.174 368 212 15 20 344 21 375 1.01e-17 84.7
MS.gene024004.t1 MTR_3g010520 25.733 307 176 12 20 320 25 285 1.04e-17 84.3
MS.gene024004.t1 MTR_3g007300 27.070 314 151 12 20 320 49 297 1.05e-17 84.3
MS.gene024004.t1 MTR_6g034720 45.455 121 56 5 147 266 53 164 1.42e-17 81.3
MS.gene024004.t1 MTR_8g099460 25.472 318 192 13 20 319 5 295 1.51e-17 84.0
MS.gene024004.t1 MTR_5g022420 27.508 309 184 14 19 323 26 298 1.64e-17 84.0
MS.gene024004.t1 MTR_7g055870 28.249 354 190 13 12 320 5 339 1.66e-17 84.3
MS.gene024004.t1 MTR_1g054725 23.919 393 240 18 19 388 19 375 1.69e-17 83.6
MS.gene024004.t1 MTR_7g056820 26.121 379 216 17 20 364 7 355 2.13e-17 83.6
MS.gene024004.t1 MTR_2g031640 25.484 310 195 12 20 319 6 289 2.28e-17 83.6
MS.gene024004.t1 MTR_2g426020 25.466 322 192 15 20 319 6 301 2.45e-17 83.6
MS.gene024004.t1 MTR_5g027330 23.899 318 199 12 24 320 44 339 2.58e-17 83.6
MS.gene024004.t1 MTR_7g056503 28.395 324 186 15 19 319 20 320 2.79e-17 83.2
MS.gene024004.t1 MTR_5g027370 23.899 318 199 12 24 320 33 328 2.88e-17 83.6
MS.gene024004.t1 MTR_4g013180 23.926 326 203 9 18 320 9 312 3.08e-17 83.6
MS.gene024004.t1 MTR_0128s0070 26.765 340 190 12 20 332 22 329 3.10e-17 83.2
MS.gene024004.t1 MTR_4g028510 26.852 324 207 12 20 320 16 332 3.25e-17 83.6
MS.gene024004.t1 MTR_4g014370 25.359 418 253 17 14 389 5 405 3.37e-17 83.2
MS.gene024004.t1 MTR_8g101580 30.368 326 163 19 20 323 45 328 3.64e-17 82.8
MS.gene024004.t1 MTR_4g122860 33.668 199 87 10 208 396 157 320 3.70e-17 82.4
MS.gene024004.t1 MTR_2g021800 24.645 422 247 15 19 391 15 414 3.80e-17 83.2
MS.gene024004.t1 MTR_2g047200 27.795 331 179 14 20 320 20 320 3.91e-17 82.8
MS.gene024004.t1 MTR_5g069760 26.480 321 187 11 19 320 5 295 4.06e-17 82.4
MS.gene024004.t1 MTR_5g069390 25.604 414 254 17 10 387 16 411 4.39e-17 83.2
MS.gene024004.t1 MTR_3g036335 25.159 314 189 12 20 320 41 321 5.67e-17 82.4
MS.gene024004.t1 MTR_5g057643 26.754 228 138 6 20 241 46 250 6.55e-17 80.5
MS.gene024004.t1 MTR_1g061330 23.711 388 253 14 20 394 4 361 6.91e-17 82.0
MS.gene024004.t1 MTR_2g031680 26.774 310 188 13 20 319 6 286 7.69e-17 82.0
MS.gene024004.t1 MTR_5g037680 23.615 343 212 11 13 327 1 321 8.35e-17 82.0
MS.gene024004.t1 MTR_1g112930 25.902 305 192 11 20 320 25 299 1.25e-16 81.3
MS.gene024004.t1 MTR_2g025960 27.727 220 127 10 119 319 3 209 1.59e-16 80.1
MS.gene024004.t1 MTR_4g129190 26.140 329 188 11 20 320 6 307 1.62e-16 80.9
MS.gene024004.t1 MTR_7g056760 24.324 333 195 11 19 320 22 328 2.05e-16 80.9
MS.gene024004.t1 MTR_4g028750 25.208 361 215 16 19 350 15 349 2.43e-16 80.5
MS.gene024004.t1 MTR_7g055977 28.528 326 178 15 19 320 6 300 3.15e-16 80.1
MS.gene024004.t1 MTR_5g043160 27.083 336 195 12 22 320 52 374 3.33e-16 80.5
MS.gene024004.t1 MTR_3g011020 26.433 314 177 13 20 320 28 300 3.84e-16 79.7
MS.gene024004.t1 MTR_6g007135 25.786 318 191 13 20 320 26 315 3.95e-16 79.7
MS.gene024004.t1 MTR_7g069550 26.786 392 209 20 20 364 14 374 4.79e-16 79.7
MS.gene024004.t1 MTR_7g017130 27.729 339 194 16 12 320 10 327 4.84e-16 79.7
MS.gene024004.t1 MTR_7g017170 27.729 339 194 16 12 320 10 327 5.16e-16 79.7
MS.gene024004.t1 MTR_5g057040 29.224 219 130 6 5 217 31 230 5.79e-16 80.5
MS.gene024004.t1 MTR_5g097680 24.883 426 257 18 14 389 11 423 6.74e-16 79.3
MS.gene024004.t1 MTR_1g068860 24.383 324 209 11 20 334 4 300 7.14e-16 79.0
MS.gene024004.t1 MTR_1g029650 25.602 332 184 13 20 320 8 307 7.67e-16 79.0
MS.gene024004.t1 MTR_7g055930 26.836 354 195 13 12 320 5 339 9.63e-16 79.0
MS.gene024004.t1 MTR_2g022000 25.281 356 205 16 19 327 15 356 1.01e-15 79.0
MS.gene024004.t1 MTR_2g021252 25.418 299 187 11 23 319 50 314 1.05e-15 78.6
MS.gene024004.t1 MTR_4g130330 26.911 327 202 14 19 320 6 320 1.32e-15 78.2
MS.gene024004.t1 MTR_0267s0050 24.458 323 197 10 23 320 9 309 1.40e-15 78.2
MS.gene024004.t1 MTR_4g031770 23.438 320 195 12 20 324 4 288 1.42e-15 77.8
MS.gene024004.t1 MTR_7g007300 26.415 318 178 15 20 324 103 377 1.83e-15 78.2
MS.gene024004.t1 MTR_4g028660 25.538 325 209 12 19 320 15 329 2.00e-15 77.8
MS.gene024004.t1 MTR_4g027450 25.538 325 209 12 19 320 15 329 2.00e-15 77.8
MS.gene024004.t1 MTR_5g096710 26.549 339 191 14 20 329 23 332 2.54e-15 77.4
MS.gene024004.t1 MTR_8g041270 26.024 415 247 16 14 389 9 402 2.93e-15 77.4
MS.gene024004.t1 MTR_4g117550 25.845 414 224 21 14 394 11 374 3.22e-15 77.0
MS.gene024004.t1 MTR_7g016930 26.006 323 192 14 14 319 10 302 3.46e-15 76.3
MS.gene024004.t1 MTR_7g078040 26.331 338 198 12 20 320 9 332 3.74e-15 77.0
MS.gene024004.t1 MTR_4g023430 54.412 68 30 1 10 76 31 98 4.57e-15 74.3
MS.gene024004.t1 MTR_4g024890 25.078 319 197 11 19 319 9 303 4.60e-15 76.6
MS.gene024004.t1 MTR_2g043400 27.164 335 179 12 20 320 23 326 4.67e-15 76.6
MS.gene024004.t1 MTR_8g012090 25.904 332 179 12 22 330 18 305 5.22e-15 75.9
MS.gene024004.t1 MTR_5g046260 23.279 305 170 12 20 320 4 248 6.84e-15 75.1
MS.gene024004.t1 MTR_3g011650 30.000 230 127 9 23 247 82 282 7.90e-15 74.7
MS.gene024004.t1 MTR_3g030310 26.198 313 191 12 20 320 21 305 8.05e-15 75.9
MS.gene024004.t1 MTR_7g017040 25.117 426 240 19 8 389 4 394 8.45e-15 75.9
MS.gene024004.t1 MTR_4g019990 25.680 331 191 14 19 319 5 310 8.77e-15 75.9
MS.gene024004.t1 MTR_5g009060 27.108 332 190 15 20 319 25 336 9.35e-15 75.9
MS.gene024004.t1 MTR_6g055210 25.000 328 201 9 19 320 21 329 9.44e-15 75.9
MS.gene024004.t1 MTR_2g078850 24.104 307 193 10 23 320 33 308 9.83e-15 75.5
MS.gene024004.t1 MTR_2g043410 25.915 328 186 10 23 320 25 325 9.90e-15 75.9
MS.gene024004.t1 MTR_7g022600 28.779 344 189 13 20 324 23 349 1.39e-14 75.5
MS.gene024004.t1 MTR_3g010620 26.384 307 172 14 23 320 39 300 1.58e-14 75.1
MS.gene024004.t1 MTR_2g024100 27.036 307 178 12 35 319 22 304 1.63e-14 75.1
MS.gene024004.t1 MTR_3g023940 26.791 321 176 15 20 320 34 315 1.69e-14 74.7
MS.gene024004.t1 MTR_3g024040 25.667 300 177 12 27 319 38 298 1.84e-14 74.7
MS.gene024004.t1 MTR_5g059430 25.905 359 215 14 10 327 16 364 1.96e-14 74.7
MS.gene024004.t1 MTR_7g079640 28.024 339 189 18 14 328 7 314 2.54e-14 74.3
MS.gene024004.t1 MTR_7g091640 27.492 331 184 16 19 320 34 337 2.60e-14 74.3
MS.gene024004.t1 MTR_7g062060 25.526 333 209 12 15 320 7 327 2.75e-14 74.3
MS.gene024004.t1 MTR_3g058480 27.338 278 146 13 20 274 39 283 3.38e-14 73.6
MS.gene024004.t1 MTR_4g030830 24.699 332 200 14 14 319 3 310 3.45e-14 73.9
MS.gene024004.t1 MTR_7g060940 25.145 346 179 14 13 320 15 318 3.88e-14 73.9
MS.gene024004.t1 MTR_0054s0100 24.163 418 245 21 15 387 12 402 3.91e-14 73.9
MS.gene024004.t1 MTR_6g053260 24.922 321 208 12 20 332 337 632 4.54e-14 74.3
MS.gene024004.t1 MTR_2g021210 26.537 309 182 12 20 320 84 355 5.09e-14 73.6
MS.gene024004.t1 MTR_4g030110 27.622 286 156 13 20 277 30 292 5.99e-14 73.2
MS.gene024004.t1 MTR_3g009250 29.694 229 128 8 23 247 44 243 6.34e-14 71.2
MS.gene024004.t1 MTR_2g066200 22.995 374 233 12 14 361 6 350 7.97e-14 72.8
MS.gene024004.t1 MTR_8g039500 24.159 327 203 14 14 320 6 307 9.55e-14 72.4
MS.gene024004.t1 MTR_4g030090 25.545 321 197 11 20 319 14 313 9.56e-14 72.8
MS.gene024004.t1 MTR_6g016285 24.242 330 200 10 20 320 21 329 9.83e-14 72.8
MS.gene024004.t1 MTR_7g066850 24.074 324 194 12 20 320 23 317 1.17e-13 72.8
MS.gene024004.t1 MTR_6g086920 26.329 395 196 17 19 340 37 409 1.35e-13 72.4
MS.gene024004.t1 MTR_1g442850 27.077 325 186 13 19 320 4 300 1.36e-13 72.0
MS.gene024004.t1 MTR_4g037465 25.532 329 184 12 20 320 21 316 1.43e-13 72.0
MS.gene024004.t1 MTR_3g464470 23.235 340 204 12 19 333 6 313 1.53e-13 72.0
MS.gene024004.t1 MTR_2g437110 26.235 324 190 14 20 320 22 319 1.56e-13 72.4
MS.gene024004.t1 MTR_7g061060 25.000 332 185 13 19 320 12 309 1.57e-13 72.0
MS.gene024004.t1 MTR_8g046310 26.804 388 233 19 23 390 19 375 1.70e-13 71.6
MS.gene024004.t1 MTR_7g055987 25.904 332 181 14 23 329 23 314 1.71e-13 71.6
MS.gene024004.t1 MTR_3g013950 23.053 321 206 9 23 320 9 311 1.71e-13 71.6
MS.gene024004.t1 MTR_0097s0030 26.364 330 175 14 20 319 14 305 2.42e-13 71.2
MS.gene024004.t1 MTR_2g047240 26.364 330 175 14 20 319 14 305 2.42e-13 71.2
MS.gene024004.t1 MTR_5g097330 23.423 333 217 11 14 319 10 331 2.72e-13 71.2
MS.gene024004.t1 MTR_7g056200 24.260 338 165 11 17 319 20 301 2.75e-13 71.2
MS.gene024004.t1 MTR_4g030980 24.217 351 197 11 20 319 15 347 3.80e-13 70.9
MS.gene024004.t1 MTR_2g034700 24.383 324 205 13 19 327 13 311 4.07e-13 70.5
MS.gene024004.t1 MTR_6g053240 24.620 329 204 13 20 332 28 328 4.13e-13 70.9
MS.gene024004.t1 MTR_1g071010 26.748 329 183 17 20 320 15 313 4.27e-13 70.5
MS.gene024004.t1 MTR_7g066100 25.926 324 205 11 19 320 10 320 4.44e-13 70.5
MS.gene024004.t1 MTR_4g011660 26.409 337 194 12 20 320 19 337 4.65e-13 70.5
MS.gene024004.t1 MTR_6g461660 25.434 346 190 17 14 319 13 330 5.41e-13 70.5
MS.gene024004.t1 MTR_0464s0020 25.714 350 195 15 20 329 23 347 5.52e-13 70.5
MS.gene024004.t1 MTR_4g080200 25.379 264 156 7 20 273 3 235 5.77e-13 70.1
MS.gene024004.t1 MTR_7g056003 24.706 340 192 13 23 329 18 326 6.74e-13 70.1
MS.gene024004.t1 MTR_7g052150 25.788 349 181 15 2 320 14 314 7.36e-13 70.1
MS.gene024004.t1 MTR_5g074850 26.901 342 196 16 14 319 29 352 7.86e-13 70.9
MS.gene024004.t1 MTR_4g031020 23.864 352 197 12 20 319 15 347 8.80e-13 69.7
MS.gene024004.t1 MTR_0707s0020 25.000 448 233 21 19 390 25 445 9.78e-13 69.7
MS.gene024004.t1 MTR_2g078870 25.778 225 131 11 117 336 53 246 1.11e-12 68.6
MS.gene024004.t1 MTR_7g056710 26.488 336 167 15 19 320 17 306 1.28e-12 68.9
MS.gene024004.t1 MTR_7g061050 24.625 333 182 14 19 320 12 306 1.50e-12 68.9
MS.gene024004.t1 MTR_5g068040 24.551 334 186 11 20 329 16 307 1.73e-12 68.6
MS.gene024004.t1 MTR_8g013000 26.197 355 202 18 11 327 1 333 1.87e-12 68.6
MS.gene024004.t1 MTR_5g056020 25.656 343 193 15 20 320 17 339 1.90e-12 68.9
MS.gene024004.t1 MTR_7g077070 24.036 337 204 13 20 320 16 336 2.01e-12 68.6
MS.gene024004.t1 MTR_4g028680 26.126 333 198 15 19 320 15 330 2.14e-12 68.6
MS.gene024004.t1 MTR_7g078050 34.043 141 74 4 20 147 6 140 2.41e-12 67.0
MS.gene024004.t1 MTR_2g066170 23.262 374 230 14 14 361 6 348 2.68e-12 68.2
MS.gene024004.t1 MTR_7g028660 24.478 335 183 12 19 319 10 308 2.77e-12 68.2
MS.gene024004.t1 MTR_7g066080 26.989 352 189 15 20 330 16 340 2.86e-12 68.2
MS.gene024004.t1 MTR_2g026010 26.728 217 130 11 119 319 88 291 3.29e-12 67.8
MS.gene024004.t1 MTR_3g030350 25.723 311 187 13 20 320 35 311 3.41e-12 67.8
MS.gene024004.t1 MTR_5g092850 26.214 412 235 20 19 389 15 398 3.43e-12 67.8
MS.gene024004.t1 MTR_4g055820 24.490 343 206 13 14 320 8 333 3.73e-12 67.4
MS.gene024004.t1 MTR_2g461450 24.590 305 192 9 20 319 18 289 4.19e-12 67.4
MS.gene024004.t1 MTR_3g009290 31.330 233 123 10 20 247 35 235 4.89e-12 66.2
MS.gene024004.t1 MTR_7g056170 24.096 332 170 12 4 277 60 367 5.00e-12 67.8
MS.gene024004.t1 MTR_3g010440 32.639 144 83 4 20 157 26 161 5.14e-12 67.0
MS.gene024004.t1 MTR_0134s0060 23.944 355 216 13 14 325 6 349 5.70e-12 67.4
MS.gene024004.t1 MTR_3g030320 26.601 203 123 8 120 320 44 222 6.68e-12 66.2
MS.gene024004.t1 MTR_3g024130 24.603 252 156 10 78 320 19 245 6.70e-12 66.2
MS.gene024004.t1 MTR_2g104280 24.582 419 246 16 15 389 9 401 8.35e-12 66.6
MS.gene024004.t1 MTR_6g079810 21.719 442 256 19 13 395 54 464 9.09e-12 66.6
MS.gene024004.t1 MTR_0649s0020 25.182 413 229 16 20 388 11 387 9.31e-12 66.6
MS.gene024004.t1 MTR_5g072060 27.224 371 214 16 19 363 5 345 9.81e-12 67.0
MS.gene024004.t1 MTR_7g050520 23.684 342 170 11 19 320 21 311 9.82e-12 66.2
MS.gene024004.t1 MTR_5g096910 23.478 345 216 12 19 336 16 339 1.23e-11 66.2
MS.gene024004.t1 MTR_1g055375 23.175 315 203 11 23 324 7 295 1.25e-11 65.9
MS.gene024004.t1 MTR_0831s0010 25.275 364 222 15 19 361 49 383 1.26e-11 66.2
MS.gene024004.t1 MTR_7g050480 23.851 348 174 11 13 320 15 311 1.35e-11 65.9
MS.gene024004.t1 MTR_4g024870 23.481 362 221 13 4 332 28 366 1.38e-11 66.2
MS.gene024004.t1 MTR_2g033410 25.743 303 186 13 20 313 9 281 1.88e-11 65.5
MS.gene024004.t1 MTR_1g055200 45.161 93 38 3 121 212 6 86 2.15e-11 60.8
MS.gene024004.t1 MTR_3g437520 24.225 355 197 12 20 329 23 350 2.19e-11 65.5
MS.gene024004.t1 MTR_5g064700 26.165 279 172 14 135 389 96 364 2.63e-11 65.1
MS.gene024004.t1 MTR_7g078840 24.058 345 220 10 11 320 1 338 2.70e-11 65.1
MS.gene024004.t1 MTR_8g064890 25.606 371 209 19 14 352 6 341 3.20e-11 64.7
MS.gene024004.t1 MTR_1g015740 33.333 132 81 3 20 148 8 135 3.43e-11 64.3
MS.gene024004.t1 MTR_2g064950 28.940 349 195 18 11 327 1 328 4.02e-11 64.7
MS.gene024004.t1 MTR_6g080680 22.965 344 217 12 4 320 3 325 5.03e-11 64.3
MS.gene024004.t1 MTR_5g008530 57.692 52 19 1 20 71 18 66 5.65e-11 58.5
MS.gene024004.t1 MTR_7g052670 24.709 344 205 12 19 320 20 351 5.88e-11 64.3
MS.gene024004.t1 MTR_7g056797 24.233 326 200 10 19 319 22 325 5.94e-11 63.9
MS.gene024004.t1 MTR_1g114700 25.000 312 193 13 20 319 29 311 6.54e-11 63.9
MS.gene024004.t1 MTR_7g060960 25.633 316 166 12 20 320 32 293 7.17e-11 63.5
MS.gene024004.t1 MTR_7g055850 29.596 223 119 7 12 204 5 219 7.22e-11 63.2
MS.gene024004.t1 MTR_7g079160 24.090 357 196 14 19 320 7 343 7.59e-11 63.9
MS.gene024004.t1 MTR_3g010870 25.652 230 139 8 20 245 37 238 8.87e-11 63.2
MS.gene024004.t1 MTR_6g013270 25.243 309 199 14 20 320 29 313 9.18e-11 63.5
MS.gene024004.t1 MTR_0129s0070 24.869 382 234 20 14 364 11 370 9.53e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024004.t1 AT3G06240 27.381 336 191 13 20 320 36 353 4.93e-22 97.4
MS.gene024004.t1 AT4G12560 27.244 312 199 14 20 320 4 298 5.61e-19 88.6
MS.gene024004.t1 AT4G12560 27.244 312 199 14 20 320 4 298 5.61e-19 88.6
MS.gene024004.t1 AT4G12560 27.244 312 199 14 20 320 4 298 5.61e-19 88.6
MS.gene024004.t1 AT5G49610 27.419 310 188 11 15 317 4 283 1.08e-18 87.0
MS.gene024004.t1 AT5G62660 25.157 318 197 12 20 316 41 338 3.68e-14 73.9
MS.gene024004.t1 AT1G33530 26.183 317 168 14 20 319 97 364 3.51e-13 71.2
MS.gene024004.t1 AT5G07610 27.239 268 147 12 23 274 36 271 4.08e-13 70.9
MS.gene024004.t1 AT3G07870 25.000 328 185 17 20 319 28 322 6.52e-13 70.1
MS.gene024004.t1 AT4G19930 25.275 364 227 15 19 368 42 374 1.54e-12 69.3
MS.gene024004.t1 AT2G16810 25.969 258 171 9 19 275 40 278 3.26e-12 67.0
MS.gene024004.t1 AT3G16210 23.664 262 150 9 19 273 4 222 6.72e-12 66.6
MS.gene024004.t1 AT3G23880 25.000 344 225 13 20 356 14 331 7.11e-12 66.6
MS.gene024004.t1 AT4G19940 23.127 307 201 9 20 308 35 324 8.50e-12 66.6
MS.gene024004.t1 AT1G53550 22.713 317 209 13 20 327 35 324 1.94e-11 65.5
MS.gene024004.t1 AT5G62510 26.316 304 173 15 20 299 44 320 4.06e-11 64.7

Find 77 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTATTGCCTTTGATTTAA+AGG 0.142829 7.1:+24592013 MS.gene024004:CDS
CGATCTGATCCTTATATTAT+AGG 0.155927 7.1:+24591585 MS.gene024004:CDS
TTTGATGTATTGGTACTTAA+TGG 0.184691 7.1:+24592101 MS.gene024004:CDS
AAATCTATTGTTAGGGCTTC+AGG 0.232940 7.1:-24591501 None:intergenic
GTGTAGAGGGTTTCTATTAC+TGG 0.246771 7.1:+24591611 MS.gene024004:CDS
ATGCATTAAAATCTATTGTT+AGG 0.252018 7.1:-24591509 None:intergenic
AAAATGTGAAGTTGCAAAAT+TGG 0.263458 7.1:-24591406 None:intergenic
GATAGCTCTTCCAGATGATT+TGG 0.281172 7.1:+24592052 MS.gene024004:CDS
ACCGTCTACTGATGATTATT+TGG 0.293395 7.1:+24591770 MS.gene024004:CDS
ATGAGGTTACAGTTAAGATA+TGG 0.325643 7.1:+24592147 MS.gene024004:CDS
AACATTGTCGGCATCATTAC+CGG 0.352896 7.1:-24591712 None:intergenic
CTACACGAACCTATAATATA+AGG 0.353070 7.1:-24591594 None:intergenic
GGATTCCATAGGTAAAAGTA+TGG 0.356429 7.1:-24591642 None:intergenic
TGAAATCCTGTCGAGGTTGC+CGG 0.357138 7.1:+24591323 MS.gene024004:CDS
TCATTACCGGCAATGATTAT+AGG 0.357356 7.1:-24591699 None:intergenic
TCTCACTGAGAGCTAATAAC+TGG 0.358828 7.1:+24591862 MS.gene024004:CDS
TTAATGGACTTATTAGTGTA+TGG 0.381690 7.1:+24592117 MS.gene024004:CDS
TAATAACTGGAAACAAATTC+AGG 0.385142 7.1:+24591875 MS.gene024004:CDS
CTCTCTCCTATAATCATTGC+CGG 0.391526 7.1:+24591693 MS.gene024004:CDS
ATAGTTATCATTGTATTCAT+AGG 0.402210 7.1:-24591805 None:intergenic
TAACTAAAATCCAAATCATC+TGG 0.402774 7.1:-24592062 None:intergenic
CATATTCACACGTTTCTGTA+TGG 0.407958 7.1:+24591735 MS.gene024004:CDS
TCTCCATCTCAAGATCAATA+AGG 0.415001 7.1:-24591266 None:intergenic
GGTTTCTATGTCGTGATAAA+CGG 0.421510 7.1:-24592355 None:intergenic
ACAAGCTGTGGTGATATAGT+TGG 0.435329 7.1:+24592257 MS.gene024004:CDS
TGCATTAAAATCTATTGTTA+GGG 0.436478 7.1:-24591508 None:intergenic
ACTCTGTATACACGGCCATT+TGG 0.441470 7.1:-24592376 None:intergenic
CTCTGCTTCTCAACAGAGTC+GGG 0.452807 7.1:+24591931 MS.gene024004:CDS
AAATGTGAAGTTGCAAAATT+GGG 0.455289 7.1:-24591405 None:intergenic
TAGTGTATGGATTTCAAATG+AGG 0.463557 7.1:+24592130 MS.gene024004:CDS
AATACAAAGTGCATTCCTCT+TGG 0.466050 7.1:+24592180 MS.gene024004:CDS
TGTCATTTCCTTTAAATCAA+AGG 0.469429 7.1:-24592021 None:intergenic
CTCTGTTGAGAAGCAGAGTC+GGG 0.484587 7.1:-24591926 None:intergenic
AATACAATGATAACTATGTT+CGG 0.493940 7.1:+24591811 MS.gene024004:CDS
GATATCTAATTCATTTCACT+TGG 0.494002 7.1:+24591833 MS.gene024004:CDS
ACTTCACCGGCAACCTCGAC+AGG 0.494036 7.1:-24591329 None:intergenic
GGCAATAATTACACTCCTAT+CGG 0.499271 7.1:-24592000 None:intergenic
AAACAATCATCTTGAGGAGC+CGG 0.502784 7.1:-24592218 None:intergenic
GCAAGTGCGTCTGTAAGTTA+TGG 0.503203 7.1:+24591364 MS.gene024004:CDS
CGTGTGAATATGAACATTGT+CGG 0.508352 7.1:-24591724 None:intergenic
TCAACGGCTGATGAATTGTC+AGG 0.517970 7.1:+24591236 None:intergenic
TAAACTTGATCAGTGCCACT+AGG 0.518219 7.1:-24592413 None:intergenic
ATATTATAGGTTCGTGTAGA+GGG 0.523652 7.1:+24591598 MS.gene024004:CDS
TGAGGTTACAGTTAAGATAT+GGG 0.527219 7.1:+24592148 MS.gene024004:CDS
TCACACGTTTCTGTATGGCT+TGG 0.531386 7.1:+24591740 MS.gene024004:CDS
ATCACGACATAGAAACCAAA+TGG 0.537260 7.1:+24592361 MS.gene024004:CDS
GAAGAGATATTATCTACCTC+AGG 0.539903 7.1:+24591290 MS.gene024004:CDS
ACTCTGCTTCTCAACAGAGT+CGG 0.544704 7.1:+24591930 MS.gene024004:CDS
TACCTATGGAATCCATCCAC+TGG 0.546833 7.1:+24591651 MS.gene024004:CDS
AGAGTCGGGTTAATCTGATA+AGG 0.547210 7.1:-24591912 None:intergenic
TATATTATAGGTTCGTGTAG+AGG 0.550437 7.1:+24591597 MS.gene024004:CDS
ACTCCTTATTGATCTTGAGA+TGG 0.556955 7.1:+24591263 MS.gene024004:CDS
CTAGGATGCTTTACAAGCTG+TGG 0.564715 7.1:+24592245 MS.gene024004:CDS
ATAGTTGGAACAGATCTTCA+AGG 0.567449 7.1:+24592272 MS.gene024004:CDS
ATCTTCAAGGTGGATTGAAG+AGG 0.569444 7.1:+24592285 MS.gene024004:CDS
CAGAGTAATACAGACTTCAC+CGG 0.569538 7.1:-24591342 None:intergenic
TTGAAGAGGTTTAATAACAA+AGG 0.571410 7.1:+24592299 MS.gene024004:CDS
ATAAACGGTAACGATAATAG+AGG 0.574003 7.1:-24592340 None:intergenic
ACTCTGTTGAGAAGCAGAGT+CGG 0.577387 7.1:-24591927 None:intergenic
TGTTTATAGACACCAGTGGA+TGG 0.582109 7.1:-24591663 None:intergenic
AGAGTCGGGTTGTTCTTGAA+CGG 0.600744 7.1:+24591945 MS.gene024004:CDS
ACCAAATAATCATCAGTAGA+CGG 0.606072 7.1:-24591771 None:intergenic
GAAAATCACAAGTTTATGTG+TGG 0.619136 7.1:-24591445 None:intergenic
AAACTTGATCAGTGCCACTA+GGG 0.621520 7.1:-24592412 None:intergenic
TTCATAATCATGAGACCGAT+AGG 0.629912 7.1:+24591985 MS.gene024004:CDS
GATTCCATAGGTAAAAGTAT+GGG 0.634296 7.1:-24591641 None:intergenic
TATTTGTTTATAGACACCAG+TGG 0.644238 7.1:-24591667 None:intergenic
GCAATGATTATAGGAGAGAG+AGG 0.651818 7.1:-24591690 None:intergenic
AAGCAGAGACTCTGTATACA+CGG 0.652046 7.1:-24592384 None:intergenic
TGATTATTGAAATCCTGTCG+AGG 0.656547 7.1:+24591316 MS.gene024004:CDS
CTATAATATAAGGATCAGAT+CGG 0.661011 7.1:-24591584 None:intergenic
TCTCTGCTTTCACTCCCTAG+TGG 0.664070 7.1:+24592398 MS.gene024004:CDS
CACCAGTGGATGGATTCCAT+AGG 0.664274 7.1:-24591653 None:intergenic
AAAATCACAAGTTTATGTGT+GGG 0.667229 7.1:-24591444 None:intergenic
ATTTCAATAATCACGTCCTG+AGG 0.674050 7.1:-24591306 None:intergenic
GTTGGAACAGATCTTCAAGG+TGG 0.676978 7.1:+24592275 MS.gene024004:CDS
ATATAAGGATCAGATCGGTG+AGG 0.737811 7.1:-24591579 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATACAATGATAACTATGTT+CGG + chr7.1:24591811-24591830 MS.gene024004:CDS 20.0%
!! ATAGTTATCATTGTATTCAT+AGG - chr7.1:24591808-24591827 None:intergenic 20.0%
!! ATGCATTAAAATCTATTGTT+AGG - chr7.1:24591512-24591531 None:intergenic 20.0%
!! TGCATTAAAATCTATTGTTA+GGG - chr7.1:24591511-24591530 None:intergenic 20.0%
!!! AATTATTGCCTTTGATTTAA+AGG + chr7.1:24592013-24592032 MS.gene024004:CDS 20.0%
!!! ATGATTATTTGGTAGTTTTT+GGG + chr7.1:24591781-24591800 MS.gene024004:CDS 20.0%
! AAAATCACAAGTTTATGTGT+GGG - chr7.1:24591447-24591466 None:intergenic 25.0%
! AAAATGTGAAGTTGCAAAAT+TGG - chr7.1:24591409-24591428 None:intergenic 25.0%
! AAATGTGAAGTTGCAAAATT+GGG - chr7.1:24591408-24591427 None:intergenic 25.0%
! CTATAATATAAGGATCAGAT+CGG - chr7.1:24591587-24591606 None:intergenic 25.0%
! GATATCTAATTCATTTCACT+TGG + chr7.1:24591833-24591852 MS.gene024004:CDS 25.0%
! TAACTAAAATCCAAATCATC+TGG - chr7.1:24592065-24592084 None:intergenic 25.0%
! TAATAACTGGAAACAAATTC+AGG + chr7.1:24591875-24591894 MS.gene024004:CDS 25.0%
! TTGAAGAGGTTTAATAACAA+AGG + chr7.1:24592299-24592318 MS.gene024004:CDS 25.0%
!! TGTCATTTCCTTTAAATCAA+AGG - chr7.1:24592024-24592043 None:intergenic 25.0%
!! TTTGATGTATTGGTACTTAA+TGG + chr7.1:24592101-24592120 MS.gene024004:CDS 25.0%
!!! GATGATTATTTGGTAGTTTT+TGG + chr7.1:24591780-24591799 MS.gene024004:CDS 25.0%
!!! TACTAGAGATTTTGATGTAT+TGG + chr7.1:24592091-24592110 MS.gene024004:CDS 25.0%
!!! TTAATGGACTTATTAGTGTA+TGG + chr7.1:24592117-24592136 MS.gene024004:CDS 25.0%
ACCAAATAATCATCAGTAGA+CGG - chr7.1:24591774-24591793 None:intergenic 30.0%
AGTGAAAAACAATCATCTTG+AGG - chr7.1:24592227-24592246 None:intergenic 30.0%
ATAAACGGTAACGATAATAG+AGG - chr7.1:24592343-24592362 None:intergenic 30.0%
ATATTATAGGTTCGTGTAGA+GGG + chr7.1:24591598-24591617 MS.gene024004:CDS 30.0%
ATGAGGTTACAGTTAAGATA+TGG + chr7.1:24592147-24592166 MS.gene024004:CDS 30.0%
CGATCTGATCCTTATATTAT+AGG + chr7.1:24591585-24591604 MS.gene024004:CDS 30.0%
CTACACGAACCTATAATATA+AGG - chr7.1:24591597-24591616 None:intergenic 30.0%
GAAAATCACAAGTTTATGTG+TGG - chr7.1:24591448-24591467 None:intergenic 30.0%
TAGTGTATGGATTTCAAATG+AGG + chr7.1:24592130-24592149 MS.gene024004:CDS 30.0%
TATATTATAGGTTCGTGTAG+AGG + chr7.1:24591597-24591616 MS.gene024004:CDS 30.0%
TATTTGTTTATAGACACCAG+TGG - chr7.1:24591670-24591689 None:intergenic 30.0%
TGAGGTTACAGTTAAGATAT+GGG + chr7.1:24592148-24592167 MS.gene024004:CDS 30.0%
! GATTCCATAGGTAAAAGTAT+GGG - chr7.1:24591644-24591663 None:intergenic 30.0%
! TTTACCCATACTTTTACCTA+TGG + chr7.1:24591637-24591656 MS.gene024004:CDS 30.0%
!! CAAGATGATTGTTTTTCACT+AGG + chr7.1:24592227-24592246 MS.gene024004:CDS 30.0%
!!! GGTTTATGAGCTTTTTTGAA+AGG - chr7.1:24591483-24591502 None:intergenic 30.0%
!!! TCTTGAACGGTTTTATTCAT+TGG + chr7.1:24591958-24591977 MS.gene024004:CDS 30.0%
AAATCTATTGTTAGGGCTTC+AGG - chr7.1:24591504-24591523 None:intergenic 35.0%
AATACAAAGTGCATTCCTCT+TGG + chr7.1:24592180-24592199 MS.gene024004:CDS 35.0%
ACCGTCTACTGATGATTATT+TGG + chr7.1:24591770-24591789 MS.gene024004:CDS 35.0%
ACTCCTTATTGATCTTGAGA+TGG + chr7.1:24591263-24591282 MS.gene024004:CDS 35.0%
ATAGTTGGAACAGATCTTCA+AGG + chr7.1:24592272-24592291 MS.gene024004:CDS 35.0%
ATCACGACATAGAAACCAAA+TGG + chr7.1:24592361-24592380 MS.gene024004:CDS 35.0%
ATGCATAGAAAAAGTCCAAG+AGG - chr7.1:24592198-24592217 None:intergenic 35.0%
ATTTCAATAATCACGTCCTG+AGG - chr7.1:24591309-24591328 None:intergenic 35.0%
CATATTCACACGTTTCTGTA+TGG + chr7.1:24591735-24591754 MS.gene024004:CDS 35.0%
CGTGTGAATATGAACATTGT+CGG - chr7.1:24591727-24591746 None:intergenic 35.0%
GAAGAGATATTATCTACCTC+AGG + chr7.1:24591290-24591309 MS.gene024004:CDS 35.0%
GGATTCCATAGGTAAAAGTA+TGG - chr7.1:24591645-24591664 None:intergenic 35.0%
GGCAATAATTACACTCCTAT+CGG - chr7.1:24592003-24592022 None:intergenic 35.0%
GGTTTCTATGTCGTGATAAA+CGG - chr7.1:24592358-24592377 None:intergenic 35.0%
TCATTACCGGCAATGATTAT+AGG - chr7.1:24591702-24591721 None:intergenic 35.0%
TCTCCATCTCAAGATCAATA+AGG - chr7.1:24591269-24591288 None:intergenic 35.0%
TGATTATTGAAATCCTGTCG+AGG + chr7.1:24591316-24591335 MS.gene024004:CDS 35.0%
TTCATAATCATGAGACCGAT+AGG + chr7.1:24591985-24592004 MS.gene024004:CDS 35.0%
!! TTGGACTTTTTCTATGCATC+CGG + chr7.1:24592199-24592218 MS.gene024004:CDS 35.0%
AAACAATCATCTTGAGGAGC+CGG - chr7.1:24592221-24592240 None:intergenic 40.0%
AACATTGTCGGCATCATTAC+CGG - chr7.1:24591715-24591734 None:intergenic 40.0%
AAGCAGAGACTCTGTATACA+CGG - chr7.1:24592387-24592406 None:intergenic 40.0%
ACAAGCTGTGGTGATATAGT+TGG + chr7.1:24592257-24592276 MS.gene024004:CDS 40.0%
AGAGTCGGGTTAATCTGATA+AGG - chr7.1:24591915-24591934 None:intergenic 40.0%
ATATAAGGATCAGATCGGTG+AGG - chr7.1:24591582-24591601 None:intergenic 40.0%
ATCGGTGAGGCAAAAAATCA+AGG - chr7.1:24591569-24591588 None:intergenic 40.0%
CAGAGTAATACAGACTTCAC+CGG - chr7.1:24591345-24591364 None:intergenic 40.0%
CTCTCTCCTATAATCATTGC+CGG + chr7.1:24591693-24591712 MS.gene024004:CDS 40.0%
GATAGCTCTTCCAGATGATT+TGG + chr7.1:24592052-24592071 MS.gene024004:CDS 40.0%
GCAATGATTATAGGAGAGAG+AGG - chr7.1:24591693-24591712 None:intergenic 40.0%
GTGTAGAGGGTTTCTATTAC+TGG + chr7.1:24591611-24591630 MS.gene024004:CDS 40.0%
TCTCACTGAGAGCTAATAAC+TGG + chr7.1:24591862-24591881 MS.gene024004:CDS 40.0%
TGTTTATAGACACCAGTGGA+TGG - chr7.1:24591666-24591685 None:intergenic 40.0%
! AAACTTGATCAGTGCCACTA+GGG - chr7.1:24592415-24592434 None:intergenic 40.0%
! TAAACTTGATCAGTGCCACT+AGG - chr7.1:24592416-24592435 None:intergenic 40.0%
!! ATCTTCAAGGTGGATTGAAG+AGG + chr7.1:24592285-24592304 MS.gene024004:CDS 40.0%
!!! GAACGGTTTTATTCATTGGC+TGG + chr7.1:24591962-24591981 MS.gene024004:CDS 40.0%
ACTCTGCTTCTCAACAGAGT+CGG + chr7.1:24591930-24591949 MS.gene024004:CDS 45.0%
ACTCTGTATACACGGCCATT+TGG - chr7.1:24592379-24592398 None:intergenic 45.0%
ACTCTGTTGAGAAGCAGAGT+CGG - chr7.1:24591930-24591949 None:intergenic 45.0%
CTAGGATGCTTTACAAGCTG+TGG + chr7.1:24592245-24592264 MS.gene024004:CDS 45.0%
GCAAGTGCGTCTGTAAGTTA+TGG + chr7.1:24591364-24591383 MS.gene024004:CDS 45.0%
GTTGGAACAGATCTTCAAGG+TGG + chr7.1:24592275-24592294 MS.gene024004:CDS 45.0%
TACCTATGGAATCCATCCAC+TGG + chr7.1:24591651-24591670 MS.gene024004:CDS 45.0%
TCACACGTTTCTGTATGGCT+TGG + chr7.1:24591740-24591759 MS.gene024004:CDS 45.0%
! AGAGTCGGGTTGTTCTTGAA+CGG + chr7.1:24591945-24591964 MS.gene024004:CDS 45.0%
CTCTGCTTCTCAACAGAGTC+GGG + chr7.1:24591931-24591950 MS.gene024004:CDS 50.0%
CTCTGTTGAGAAGCAGAGTC+GGG - chr7.1:24591929-24591948 None:intergenic 50.0%
TCTCTGCTTTCACTCCCTAG+TGG + chr7.1:24592398-24592417 MS.gene024004:CDS 50.0%
TGAAATCCTGTCGAGGTTGC+CGG + chr7.1:24591323-24591342 MS.gene024004:CDS 50.0%
! CACCAGTGGATGGATTCCAT+AGG - chr7.1:24591656-24591675 None:intergenic 50.0%
ACTTCACCGGCAACCTCGAC+AGG - chr7.1:24591332-24591351 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 24591246 24592436 24591246 ID=MS.gene024004
chr7.1 mRNA 24591246 24592436 24591246 ID=MS.gene024004.t1;Parent=MS.gene024004
chr7.1 exon 24591246 24592436 24591246 ID=MS.gene024004.t1.exon1;Parent=MS.gene024004.t1
chr7.1 CDS 24591246 24592436 24591246 ID=cds.MS.gene024004.t1;Parent=MS.gene024004.t1
Gene Sequence

>MS.gene024004

ATGAATTGTCAGGCGACACTCCTTATTGATCTTGAGATGGAGAAGAAGAGATATTATCTACCTCAGGACGTGATTATTGAAATCCTGTCGAGGTTGCCGGTGAAGTCTGTATTACTCTGCAAGTGCGTCTGTAAGTTATGGCTTTCTATCATCTCTGTTCCCAATTTTGCAACTTCACATTTTCAACTTGCTGCATCACCCACACATAAACTTGTGATTTTCAGATATTATAATCCTTTCAAAAAAGCTCATAAACCTGAAGCCCTAACAATAGATTTTAATGCATCGCTCAGCGATGATTCTGCTTATCATTCACTAAGCCTTGATTTTTTGCCTCACCGATCTGATCCTTATATTATAGGTTCGTGTAGAGGGTTTCTATTACTGGACGTTTACCCATACTTTTACCTATGGAATCCATCCACTGGTGTCTATAAACAAATACCTCTCTCTCCTATAATCATTGCCGGTAATGATGCCGACAATGTTCATATTCACACGTTTCTGTATGGCTTGGCATATGAACCGTCTACTGATGATTATTTGGTAGTTTTTGGGTCCTATGAATACAATGATAACTATGTTCGGATATCTAATTCATTTCACTTGGAGATTTTCTCACTGAGAGCTAATAACTGGAAACAAATTCAGGTTGCTTCTCATTTGCCTTATCAGATTAACCCGACTCTGCTTCTCAACAGAGTCGGGTTGTTCTTGAACGGTTTTATTCATTGGCTGGTTCATAATCATGAGACCGATAGGAGTGTAATTATTGCCTTTGATTTAAAGGAAATGACACTGTCAGAGATAGCTCTTCCAGATGATTTGGATTTTAGTTATATTTCTACTAGAGATTTTGATGTATTGGTACTTAATGGACTTATTAGTGTATGGATTTCAAATGAGGTTACAGTTAAGATATGGGTGATGCAAGAATACAAAGTGCATTCCTCTTGGACTTTTTCTATGCATCCGGCTCCTCAAGATGATTGTTTTTCACTAGGATGCTTTACAAGCTGTGGTGATATAGTTGGAACAGATCTTCAAGGTGGATTGAAGAGGTTTAATAACAAAGGACAGCTGCTAGAACATCACCTCTATTATCGTTACCGTTTATCACGACATAGAAACCAAATGGCCGTGTATACAGAGTCTCTGCTTTCACTCCCTAGTGGCACTGATCAAGTTTAA

Protein sequence

>MS.gene024004.t1

MNCQATLLIDLEMEKKRYYLPQDVIIEILSRLPVKSVLLCKCVCKLWLSIISVPNFATSHFQLAASPTHKLVIFRYYNPFKKAHKPEALTIDFNASLSDDSAYHSLSLDFLPHRSDPYIIGSCRGFLLLDVYPYFYLWNPSTGVYKQIPLSPIIIAGNDADNVHIHTFLYGLAYEPSTDDYLVVFGSYEYNDNYVRISNSFHLEIFSLRANNWKQIQVASHLPYQINPTLLLNRVGLFLNGFIHWLVHNHETDRSVIIAFDLKEMTLSEIALPDDLDFSYISTRDFDVLVLNGLISVWISNEVTVKIWVMQEYKVHSSWTFSMHPAPQDDCFSLGCFTSCGDIVGTDLQGGLKRFNNKGQLLEHHLYYRYRLSRHRNQMAVYTESLLSLPSGTDQV