AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene87200


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87200.t1 MTR_4g117850 56.136 383 126 7 1 351 1 373 1.19e-127 371
MS.gene87200.t1 MTR_3g103020 53.786 383 137 8 1 353 1 373 7.05e-124 362
MS.gene87200.t1 MTR_4g117770 54.960 373 123 6 14 353 2 362 1.72e-119 350
MS.gene87200.t1 MTR_4g117810 54.960 373 123 6 14 353 2 362 1.72e-119 350
MS.gene87200.t1 MTR_4g117780 52.815 373 131 7 14 353 2 362 2.03e-119 350
MS.gene87200.t1 MTR_4g116330 49.610 385 156 8 5 358 3 380 8.61e-114 336
MS.gene87200.t1 MTR_4g109270 55.890 365 114 11 23 353 8 359 2.22e-113 334
MS.gene87200.t1 MTR_3g034180 50.636 393 145 10 2 355 104 486 9.23e-112 334
MS.gene87200.t1 MTR_4g023090 49.871 387 133 11 14 353 7 379 9.63e-108 321
MS.gene87200.t1 MTR_4g021785 51.515 363 131 7 19 353 5 350 2.25e-107 318
MS.gene87200.t1 MTR_3g034160 51.187 379 138 8 16 355 2 372 1.62e-105 315
MS.gene87200.t1 MTR_3g034130 50.000 362 135 8 22 344 8 362 1.40e-103 310
MS.gene87200.t1 MTR_4g116330 50.279 358 155 9 5 358 3 341 7.30e-103 306
MS.gene87200.t1 MTR_6g060650 53.117 369 127 9 22 352 7 367 1.61e-102 307
MS.gene87200.t1 MTR_8g433040 50.000 368 142 10 12 353 8 359 6.02e-102 305
MS.gene87200.t1 MTR_8g032380 50.000 368 142 10 12 353 8 359 6.02e-102 305
MS.gene87200.t1 MTR_4g094365 50.137 365 135 10 22 352 7 358 1.27e-101 304
MS.gene87200.t1 MTR_4g122850 50.970 361 127 14 33 354 11 360 7.51e-100 300
MS.gene87200.t1 MTR_4g023080 50.136 369 132 10 16 353 2 349 3.97e-99 298
MS.gene87200.t1 MTR_4g109280 50.413 363 140 8 17 351 2 352 4.04e-99 298
MS.gene87200.t1 MTR_4g023070 46.649 373 147 10 23 353 3 365 3.30e-97 293
MS.gene87200.t1 MTR_4g023440 50.143 349 145 10 9 353 4 327 3.53e-94 284
MS.gene87200.t1 MTR_4g023380 48.608 395 117 12 14 352 7 371 4.78e-94 285
MS.gene87200.t1 MTR_4g023120 45.013 371 156 8 23 353 3 365 4.47e-93 283
MS.gene87200.t1 MTR_4g118380 49.722 360 122 10 21 329 6 357 5.72e-93 282
MS.gene87200.t1 MTR_5g070130 46.933 375 157 7 14 352 2 370 2.05e-91 279
MS.gene87200.t1 MTR_5g070080 45.789 380 152 7 22 354 9 381 4.94e-91 278
MS.gene87200.t1 MTR_1g055135 46.032 378 157 11 13 353 3 370 8.58e-91 277
MS.gene87200.t1 MTR_5g070088 44.211 380 161 7 22 354 6 381 1.10e-89 275
MS.gene87200.t1 MTR_5g097210 47.340 376 148 14 15 356 2 361 1.11e-89 274
MS.gene87200.t1 MTR_8g032390 45.889 377 135 11 12 354 30 371 4.44e-89 273
MS.gene87200.t1 MTR_4g117720 46.467 368 118 10 22 354 50 373 3.67e-86 265
MS.gene87200.t1 MTR_4g023190 47.978 371 143 10 15 353 2 354 3.72e-86 265
MS.gene87200.t1 MTR_4g023130 46.070 369 106 9 16 353 2 308 4.84e-85 260
MS.gene87200.t1 MTR_8g040935 65.174 201 40 1 183 353 3 203 3.79e-84 254
MS.gene87200.t1 MTR_4g117870 52.899 276 113 7 80 353 2 262 9.15e-83 253
MS.gene87200.t1 MTR_4g121580 47.175 354 152 12 14 348 2 339 4.47e-82 255
MS.gene87200.t1 MTR_4g023150 46.361 371 150 9 15 353 2 355 9.65e-82 253
MS.gene87200.t1 MTR_4g023200 47.312 372 145 10 15 353 2 355 2.52e-81 252
MS.gene87200.t1 MTR_1g055165 46.746 338 149 9 18 353 5 313 8.80e-80 247
MS.gene87200.t1 MTR_4g117750 44.744 371 148 10 22 353 2 354 1.91e-78 249
MS.gene87200.t1 MTR_4g117750 62.037 108 39 1 246 353 373 478 2.75e-34 132
MS.gene87200.t1 MTR_8g433030 42.133 375 119 11 12 354 30 338 5.67e-73 230
MS.gene87200.t1 MTR_8g013010 46.953 279 112 7 5 255 39 309 5.20e-67 214
MS.gene87200.t1 MTR_4g118370 47.863 234 99 6 136 355 33 257 3.89e-58 189
MS.gene87200.t1 MTR_7g117720 40.230 348 122 11 15 353 2 272 9.97e-58 189
MS.gene87200.t1 MTR_1g055195 42.812 313 114 13 85 355 186 475 9.52e-56 189
MS.gene87200.t1 MTR_4g116340 46.753 231 94 7 6 229 19 227 1.21e-52 175
MS.gene87200.t1 MTR_4g116320 48.837 215 75 5 168 352 43 252 1.19e-50 170
MS.gene87200.t1 MTR_4g118400 40.541 296 105 10 94 352 33 294 3.06e-50 170
MS.gene87200.t1 MTR_7g079370 38.000 350 153 14 52 352 16 350 1.30e-48 167
MS.gene87200.t1 MTR_4g114700 43.777 233 101 8 124 349 9 218 3.66e-45 155
MS.gene87200.t1 MTR_7g079400 37.061 313 145 11 82 354 33 333 7.63e-44 154
MS.gene87200.t1 MTR_4g117530 43.636 220 103 5 141 355 47 250 2.95e-41 145
MS.gene87200.t1 MTR_2g048580 32.804 378 163 17 22 354 7 338 3.25e-40 145
MS.gene87200.t1 MTR_8g102520 34.639 332 149 12 57 355 23 319 1.86e-38 140
MS.gene87200.t1 MTR_4g109290 49.693 163 44 4 19 177 5 133 3.79e-38 135
MS.gene87200.t1 MTR_4g118360 54.615 130 53 3 231 358 1 126 6.44e-38 132
MS.gene87200.t1 MTR_6g463430 41.872 203 80 5 182 353 2 197 3.76e-36 130
MS.gene87200.t1 MTR_5g069120 44.872 156 75 4 34 181 2 154 5.17e-33 121
MS.gene87200.t1 MTR_1g055250 39.056 233 97 9 147 345 32 253 2.09e-31 121
MS.gene87200.t1 MTR_1g055175 55.118 127 50 5 228 352 74 195 6.97e-31 116
MS.gene87200.t1 MTR_5g023000 60.000 95 36 1 259 353 2 94 5.13e-30 110
MS.gene87200.t1 MTR_2g021150 28.455 369 215 14 20 350 11 368 1.08e-29 117
MS.gene87200.t1 MTR_1g094210 29.201 363 200 12 3 328 37 379 1.11e-29 118
MS.gene87200.t1 MTR_1g097490 29.050 358 208 12 23 350 49 390 1.94e-29 117
MS.gene87200.t1 MTR_4g122860 44.099 161 76 5 201 352 159 314 5.03e-29 115
MS.gene87200.t1 MTR_4g122860 60.317 63 23 1 14 76 61 121 1.95e-12 67.8
MS.gene87200.t1 MTR_4g117430 45.000 160 50 4 124 255 3 152 5.99e-29 110
MS.gene87200.t1 MTR_1g094210 28.424 387 213 14 3 350 37 398 8.11e-29 115
MS.gene87200.t1 MTR_5g022420 28.571 343 206 11 20 338 24 351 2.23e-27 111
MS.gene87200.t1 MTR_4g023430 50.388 129 59 3 6 131 25 151 9.01e-27 106
MS.gene87200.t1 MTR_4g023430 47.525 101 48 2 256 353 119 217 3.06e-18 82.8
MS.gene87200.t1 MTR_7g079420 36.000 250 130 11 123 355 905 1141 9.24e-27 112
MS.gene87200.t1 MTR_4g107820 27.841 352 213 12 3 322 16 358 2.42e-26 108
MS.gene87200.t1 MTR_4g107780 27.841 352 213 12 3 322 16 358 2.42e-26 108
MS.gene87200.t1 MTR_4g107780 27.841 352 213 12 3 322 16 358 2.73e-26 108
MS.gene87200.t1 MTR_8g101580 27.642 369 219 13 17 350 39 394 2.96e-26 108
MS.gene87200.t1 MTR_4g107820 27.841 352 213 12 3 322 16 358 3.04e-26 108
MS.gene87200.t1 MTR_4g108820 28.710 310 151 10 8 290 27 293 3.41e-26 107
MS.gene87200.t1 MTR_1g097560 30.395 329 190 14 23 324 36 352 4.73e-26 107
MS.gene87200.t1 MTR_4g055060 31.596 307 153 14 18 281 25 317 6.35e-25 104
MS.gene87200.t1 MTR_3g007360 29.940 334 168 14 26 312 55 369 4.97e-24 102
MS.gene87200.t1 MTR_3g007410 30.408 319 162 13 26 303 55 354 1.48e-23 100
MS.gene87200.t1 MTR_3g006670 30.201 298 161 9 20 281 46 332 1.52e-23 100
MS.gene87200.t1 MTR_1g097330 31.153 321 176 15 20 307 13 321 2.03e-23 100
MS.gene87200.t1 MTR_5g057690 29.032 310 163 12 19 296 45 329 3.74e-23 99.8
MS.gene87200.t1 MTR_3g014540 28.955 335 170 12 9 292 5 322 1.04e-22 98.2
MS.gene87200.t1 MTR_3g007330 29.831 295 158 10 20 281 45 323 1.84e-22 97.8
MS.gene87200.t1 MTR_3g036430 27.671 365 193 15 19 350 16 342 2.36e-22 96.7
MS.gene87200.t1 MTR_2g021155 29.316 307 166 10 17 286 30 322 6.76e-22 97.8
MS.gene87200.t1 MTR_8g073550 37.059 170 89 5 20 179 27 188 7.69e-22 93.2
MS.gene87200.t1 MTR_2g055970 27.273 374 226 14 11 350 199 560 1.10e-21 96.7
MS.gene87200.t1 MTR_8g467140 28.391 317 186 9 6 290 15 322 9.71e-21 92.0
MS.gene87200.t1 MTR_2g029990 27.624 362 212 17 26 350 54 402 1.50e-20 92.4
MS.gene87200.t1 MTR_1g054575 27.869 305 173 12 18 290 47 336 2.44e-20 92.8
MS.gene87200.t1 MTR_5g057790 28.349 321 161 14 19 296 45 339 2.68e-20 91.7
MS.gene87200.t1 MTR_2g046920 28.896 308 170 13 21 293 22 315 3.28e-20 91.3
MS.gene87200.t1 MTR_2g046830 28.053 303 179 11 21 293 23 316 3.33e-20 91.3
MS.gene87200.t1 MTR_3g010390 29.688 320 167 12 20 289 30 341 4.68e-20 90.9
MS.gene87200.t1 MTR_2g426020 25.189 397 201 15 23 356 6 369 6.43e-20 90.5
MS.gene87200.t1 MTR_7g079450 41.406 128 68 4 228 355 14 134 1.87e-19 84.0
MS.gene87200.t1 MTR_3g009310 28.247 308 173 10 17 289 36 330 1.94e-19 89.0
MS.gene87200.t1 MTR_3g010430 26.549 339 176 11 5 289 7 326 4.25e-19 88.2
MS.gene87200.t1 MTR_3g014570 27.928 333 188 12 1 292 1 322 5.44e-19 87.8
MS.gene87200.t1 MTR_3g013770 36.686 169 85 7 19 174 29 188 5.49e-19 87.8
MS.gene87200.t1 MTR_5g057020 27.869 305 168 13 19 296 45 324 7.10e-19 87.0
MS.gene87200.t1 MTR_2g046900 27.321 377 209 15 21 350 26 384 1.04e-18 87.0
MS.gene87200.t1 MTR_5g008530 70.690 58 15 1 23 80 18 73 1.09e-18 79.7
MS.gene87200.t1 MTR_4g061340 28.528 326 178 12 7 292 10 320 1.21e-18 86.7
MS.gene87200.t1 MTR_5g011200 27.548 363 201 15 9 335 6 342 1.51e-18 86.3
MS.gene87200.t1 MTR_3g030250 27.483 302 160 11 20 286 34 311 2.03e-18 85.9
MS.gene87200.t1 MTR_6g021880 25.562 356 223 11 33 350 30 381 2.49e-18 85.9
MS.gene87200.t1 MTR_1g050542 25.000 368 225 13 18 350 53 404 2.62e-18 85.9
MS.gene87200.t1 MTR_7g407070 28.013 307 174 8 20 281 29 333 3.63e-18 85.5
MS.gene87200.t1 MTR_3g083640 27.493 371 209 16 20 350 52 402 5.27e-18 85.1
MS.gene87200.t1 MTR_6g017270 26.923 364 204 14 20 350 6 340 6.26e-18 84.0
MS.gene87200.t1 MTR_3g010520 28.025 314 173 13 1 286 3 291 6.84e-18 84.3
MS.gene87200.t1 MTR_5g057643 32.178 202 109 8 19 208 45 230 7.16e-18 82.8
MS.gene87200.t1 MTR_8g013005 67.857 56 16 1 298 353 1 54 7.22e-18 77.0
MS.gene87200.t1 MTR_3g036290 29.932 294 169 15 21 292 20 298 8.20e-18 84.0
MS.gene87200.t1 MTR_1g055200 53.165 79 33 2 120 197 5 80 9.58e-18 78.2
MS.gene87200.t1 MTR_5g069760 25.000 384 216 12 22 351 5 370 1.08e-17 83.6
MS.gene87200.t1 MTR_3g010590 28.431 306 182 12 3 286 21 311 1.12e-17 84.0
MS.gene87200.t1 MTR_3g023930 27.273 297 194 10 2 286 13 299 1.25e-17 83.6
MS.gene87200.t1 MTR_5g057710 28.205 312 155 14 19 286 45 331 1.29e-17 84.0
MS.gene87200.t1 MTR_4g129190 34.010 197 103 6 23 207 6 187 1.44e-17 83.6
MS.gene87200.t1 MTR_6g053240 25.000 312 174 10 20 286 25 321 1.73e-17 83.6
MS.gene87200.t1 MTR_3g011100 34.706 170 96 6 20 179 232 396 1.95e-17 84.0
MS.gene87200.t1 MTR_7g067680 27.476 313 171 11 4 286 30 316 2.12e-17 83.2
MS.gene87200.t1 MTR_0044s0300 27.187 320 179 12 4 286 18 320 2.19e-17 83.2
MS.gene87200.t1 MTR_3g009250 35.385 195 105 7 20 207 38 218 2.80e-17 80.9
MS.gene87200.t1 MTR_7g035295 26.862 376 221 14 20 350 13 379 2.96e-17 82.8
MS.gene87200.t1 MTR_6g086825 24.000 400 230 13 22 355 69 460 3.58e-17 82.8
MS.gene87200.t1 MTR_3g096250 31.338 284 149 14 20 289 44 295 3.68e-17 82.0
MS.gene87200.t1 MTR_4g037465 27.078 373 196 14 4 316 2 358 4.58e-17 82.0
MS.gene87200.t1 MTR_1g055145 53.488 86 36 2 35 120 45 126 5.80e-17 80.5
MS.gene87200.t1 MTR_2g047832 26.667 345 184 16 21 307 27 360 6.36e-17 82.0
MS.gene87200.t1 MTR_0464s0020 35.135 222 93 9 19 207 19 222 7.61e-17 81.6
MS.gene87200.t1 MTR_6g053260 29.834 181 120 3 7 181 321 500 8.09e-17 82.4
MS.gene87200.t1 MTR_0097s0030 27.988 343 168 15 23 307 14 335 8.78e-17 81.3
MS.gene87200.t1 MTR_2g047240 27.988 343 168 15 23 307 14 335 8.78e-17 81.3
MS.gene87200.t1 MTR_2g021190 25.936 374 219 16 18 350 16 372 1.13e-16 80.9
MS.gene87200.t1 MTR_8g062660 27.010 311 174 11 18 286 17 316 1.42e-16 81.3
MS.gene87200.t1 MTR_3g013740 27.331 311 180 11 23 292 44 349 1.45e-16 80.9
MS.gene87200.t1 MTR_2g078900 27.778 306 161 14 20 286 30 314 1.80e-16 80.1
MS.gene87200.t1 MTR_3g083010 25.250 400 213 15 23 356 6 385 2.43e-16 80.1
MS.gene87200.t1 MTR_3g030240 24.759 311 184 10 4 286 21 309 2.67e-16 79.7
MS.gene87200.t1 MTR_3g009240 36.585 164 93 5 20 178 33 190 3.12e-16 79.7
MS.gene87200.t1 MTR_3g058470 27.848 316 178 13 20 307 34 327 3.14e-16 79.3
MS.gene87200.t1 MTR_3g030350 25.464 377 217 14 20 350 32 390 3.23e-16 79.7
MS.gene87200.t1 MTR_3g006500 26.720 378 222 13 13 350 7 369 4.16e-16 79.0
MS.gene87200.t1 MTR_3g011060 30.952 210 116 6 20 208 25 226 4.26e-16 79.3
MS.gene87200.t1 MTR_5g007610 26.384 307 173 9 18 281 36 332 4.35e-16 79.3
MS.gene87200.t1 MTR_7g070440 27.619 315 158 14 22 283 6 303 4.80e-16 79.0
MS.gene87200.t1 MTR_3g010870 25.413 303 170 11 20 286 34 316 4.84e-16 79.0
MS.gene87200.t1 MTR_6g065980 28.169 284 166 10 21 281 14 282 5.18e-16 78.6
MS.gene87200.t1 MTR_3g030330 27.508 309 189 10 1 286 1 297 7.97e-16 78.2
MS.gene87200.t1 MTR_6g079810 23.733 434 241 15 2 355 40 463 8.07e-16 79.0
MS.gene87200.t1 MTR_4g030760 24.227 388 209 14 17 343 67 430 8.13e-16 78.6
MS.gene87200.t1 MTR_3g009260 34.872 195 106 7 20 207 38 218 8.48e-16 78.2
MS.gene87200.t1 MTR_2g047892 24.096 415 225 18 6 350 2 396 8.75e-16 78.2
MS.gene87200.t1 MTR_3g072470 34.450 209 98 7 23 207 19 212 9.63e-16 78.2
MS.gene87200.t1 MTR_0115s0020 28.230 209 135 7 19 213 6 213 1.01e-15 78.2
MS.gene87200.t1 MTR_5g023570 39.474 114 62 3 18 131 32 138 1.07e-15 73.9
MS.gene87200.t1 MTR_1g055070 34.973 183 92 8 15 177 41 216 1.24e-15 77.8
MS.gene87200.t1 MTR_3g011650 34.694 196 106 8 20 207 76 257 1.25e-15 76.6
MS.gene87200.t1 MTR_0064s0160 26.901 342 188 16 6 290 28 364 1.31e-15 78.2
MS.gene87200.t1 MTR_7g028660 26.190 336 189 11 22 307 10 336 1.31e-15 77.8
MS.gene87200.t1 MTR_3g007430 29.333 300 147 13 26 281 46 324 1.37e-15 77.8
MS.gene87200.t1 MTR_3g006570 25.868 317 173 10 15 289 13 309 1.42e-15 77.4
MS.gene87200.t1 MTR_1g056710 35.227 176 88 8 11 176 25 184 1.50e-15 77.4
MS.gene87200.t1 MTR_7g445890 33.838 198 92 7 23 209 16 185 1.56e-15 77.4
MS.gene87200.t1 MTR_5g057040 32.512 203 107 9 19 208 45 230 1.66e-15 78.6
MS.gene87200.t1 MTR_5g069930 30.653 199 113 5 22 207 5 191 1.68e-15 77.4
MS.gene87200.t1 MTR_1g115185 26.316 323 199 12 6 296 22 337 1.69e-15 77.4
MS.gene87200.t1 MTR_4g024890 28.713 202 130 5 19 213 6 200 1.97e-15 77.0
MS.gene87200.t1 MTR_6g090180 24.146 410 232 15 11 351 35 434 2.54e-15 77.0
MS.gene87200.t1 MTR_2g426070 26.300 327 174 9 26 298 9 322 2.70e-15 77.0
MS.gene87200.t1 MTR_7g060940 30.476 210 123 6 8 208 7 202 2.75e-15 77.0
MS.gene87200.t1 MTR_7g056820 24.932 365 206 17 19 327 3 355 3.17e-15 76.6
MS.gene87200.t1 MTR_5g046260 27.437 277 158 11 20 281 1 249 3.21e-15 75.9
MS.gene87200.t1 MTR_8g099460 25.000 372 208 14 23 348 5 351 3.22e-15 76.6
MS.gene87200.t1 MTR_6g007135 25.407 307 175 12 23 286 26 321 3.57e-15 76.6
MS.gene87200.t1 MTR_7g055987 27.356 329 174 12 26 305 23 335 3.82e-15 76.3
MS.gene87200.t1 MTR_3g007270 26.966 356 189 12 19 329 43 372 3.95e-15 76.6
MS.gene87200.t1 MTR_1g068835 24.107 336 197 11 23 319 4 320 4.06e-15 76.3
MS.gene87200.t1 MTR_2g078850 29.195 298 158 10 26 286 33 314 4.81e-15 75.9
MS.gene87200.t1 MTR_4g030830 27.941 204 117 5 23 209 9 199 4.92e-15 76.3
MS.gene87200.t1 MTR_5g068040 29.437 231 126 9 10 228 2 207 5.39e-15 75.9
MS.gene87200.t1 MTR_7g056170 23.821 424 226 18 4 350 56 459 6.07e-15 76.3
MS.gene87200.t1 MTR_3g058480 32.973 185 91 6 20 181 36 210 9.30e-15 74.7
MS.gene87200.t1 MTR_4g080200 33.136 169 82 5 23 180 3 151 9.51e-15 74.7
MS.gene87200.t1 MTR_2g437110 26.031 388 230 16 13 350 12 392 1.03e-14 75.5
MS.gene87200.t1 MTR_1g114700 28.710 310 161 13 20 286 26 318 1.06e-14 75.1
MS.gene87200.t1 MTR_3g436150 28.618 304 170 9 20 281 29 327 1.12e-14 75.1
MS.gene87200.t1 MTR_2g021210 26.531 294 186 8 15 286 76 361 1.19e-14 75.1
MS.gene87200.t1 MTR_7g055870 27.415 383 166 17 23 307 13 381 1.51e-14 74.7
MS.gene87200.t1 MTR_7g061060 30.918 207 119 5 22 214 12 208 1.77e-14 74.3
MS.gene87200.t1 MTR_7g061090 25.526 333 175 12 11 281 10 331 2.31e-14 73.9
MS.gene87200.t1 MTR_3g011020 27.879 330 145 14 20 295 25 315 2.33e-14 73.9
MS.gene87200.t1 MTR_2g461450 24.340 341 182 9 19 307 14 330 2.80e-14 73.6
MS.gene87200.t1 MTR_7g056290 30.556 216 98 6 23 207 22 216 3.04e-14 73.9
MS.gene87200.t1 MTR_3g437520 34.081 223 94 9 19 207 19 222 3.26e-14 73.9
MS.gene87200.t1 MTR_8g098830 41.129 124 55 6 214 325 77 194 3.48e-14 71.6
MS.gene87200.t1 MTR_3g024110 25.833 360 199 17 20 344 98 424 3.63e-14 73.6
MS.gene87200.t1 MTR_3g006530 31.220 205 120 8 19 208 36 234 4.66e-14 73.2
MS.gene87200.t1 MTR_3g024040 29.795 292 162 15 30 294 38 313 4.88e-14 72.8
MS.gene87200.t1 MTR_5g048160 28.780 205 131 7 23 213 4 207 5.44e-14 72.8
MS.gene87200.t1 MTR_7g056390 31.019 216 97 6 23 207 18 212 5.44e-14 73.2
MS.gene87200.t1 MTR_5g043160 24.033 362 188 12 24 304 51 406 5.54e-14 73.2
MS.gene87200.t1 MTR_7g052150 28.636 220 120 6 7 208 6 206 5.70e-14 72.8
MS.gene87200.t1 MTR_6g013270 25.926 324 190 12 4 286 5 319 6.32e-14 72.8
MS.gene87200.t1 MTR_6g004660 29.885 174 103 5 23 181 16 185 6.39e-14 72.8
MS.gene87200.t1 MTR_3g010440 33.571 140 76 4 20 150 23 154 6.43e-14 72.4
MS.gene87200.t1 MTR_6g048140 28.896 308 165 13 19 286 35 328 7.42e-14 72.4
MS.gene87200.t1 MTR_0054s0090 23.040 421 237 18 6 355 2 406 7.54e-14 72.4
MS.gene87200.t1 MTR_6g034830 33.824 136 72 3 1 136 1 118 8.19e-14 67.8
MS.gene87200.t1 MTR_7g070880 23.698 384 198 14 7 307 4 375 8.25e-14 72.4
MS.gene87200.t1 MTR_2g028110 26.144 306 163 12 23 281 4 293 8.62e-14 72.4
MS.gene87200.t1 MTR_7g061050 25.857 321 178 8 22 294 12 320 9.15e-14 72.0
MS.gene87200.t1 MTR_3g010620 25.676 296 169 10 20 286 33 306 1.13e-13 72.0
MS.gene87200.t1 MTR_1g054725 31.414 191 121 6 9 193 6 192 1.22e-13 71.6
MS.gene87200.t1 MTR_6g016285 25.159 314 178 8 26 285 24 334 1.30e-13 72.0
MS.gene87200.t1 MTR_3g024150 29.452 292 163 13 26 286 38 317 1.38e-13 71.6
MS.gene87200.t1 MTR_7g056760 25.616 406 232 15 8 350 6 404 1.68e-13 71.6
MS.gene87200.t1 MTR_6g017280 30.542 203 123 6 20 209 6 203 1.69e-13 71.2
MS.gene87200.t1 MTR_7g056503 25.436 401 204 17 22 350 20 397 1.71e-13 71.6
MS.gene87200.t1 MTR_0128s0070 26.178 382 187 13 12 320 9 368 1.92e-13 71.2
MS.gene87200.t1 MTR_3g010870 29.885 174 100 5 20 180 34 198 2.20e-13 70.5
MS.gene87200.t1 MTR_6g042600 36.364 176 72 8 13 177 24 170 2.25e-13 71.2
MS.gene87200.t1 MTR_1g015740 25.078 319 165 10 23 314 8 279 2.71e-13 70.5
MS.gene87200.t1 MTR_8g066440 27.727 220 146 3 1 208 1 219 3.04e-13 70.9
MS.gene87200.t1 MTR_4g028660 23.415 410 229 13 10 351 3 395 3.20e-13 70.5
MS.gene87200.t1 MTR_4g027450 23.415 410 229 13 10 351 3 395 3.20e-13 70.5
MS.gene87200.t1 MTR_0667s0010 25.705 319 155 13 23 281 6 302 3.22e-13 70.9
MS.gene87200.t1 MTR_3g464470 28.365 208 103 6 22 209 6 187 3.66e-13 70.5
MS.gene87200.t1 MTR_3g010920 24.528 318 177 10 3 286 23 311 3.68e-13 70.5
MS.gene87200.t1 MTR_1g088120 26.769 325 165 13 22 283 9 323 3.98e-13 70.5
MS.gene87200.t1 MTR_7g056003 33.168 202 102 8 23 207 15 200 4.20e-13 70.5
MS.gene87200.t1 MTR_0054s0100 23.000 400 235 16 22 355 16 408 4.32e-13 70.5
MS.gene87200.t1 MTR_2g021252 27.076 277 181 9 26 286 50 321 4.64e-13 70.1
MS.gene87200.t1 MTR_3g036335 31.034 174 100 6 20 179 38 205 5.11e-13 70.1
MS.gene87200.t1 MTR_1g115160 25.000 292 178 11 22 286 21 298 5.69e-13 69.7
MS.gene87200.t1 MTR_7g013590 25.076 327 201 8 2 290 9 329 6.76e-13 69.7
MS.gene87200.t1 MTR_2g028160 22.604 407 192 14 23 346 5 371 6.86e-13 69.7
MS.gene87200.t1 MTR_7g077970 25.588 340 184 11 20 296 4 337 7.05e-13 69.7
MS.gene87200.t1 MTR_2g047200 28.729 181 111 5 12 177 9 186 9.17e-13 69.3
MS.gene87200.t1 MTR_7g062060 31.364 220 109 9 22 207 11 222 9.20e-13 69.3
MS.gene87200.t1 MTR_4g133170 25.538 325 187 13 23 307 4 313 9.93e-13 68.9
MS.gene87200.t1 MTR_3g007300 26.885 305 154 13 20 295 46 310 1.00e-12 68.9
MS.gene87200.t1 MTR_8g012090 25.478 314 177 14 31 306 24 318 1.04e-12 68.6
MS.gene87200.t1 MTR_3g023940 29.375 160 107 3 20 174 31 189 1.06e-12 68.9
MS.gene87200.t1 MTR_7g055977 25.369 339 194 11 22 307 6 338 1.14e-12 68.9
MS.gene87200.t1 MTR_7g050520 27.692 260 146 9 5 244 2 239 1.31e-12 68.6
MS.gene87200.t1 MTR_1g442850 30.918 207 111 9 20 208 2 194 1.53e-12 68.6
MS.gene87200.t1 MTR_5g046300 25.256 293 174 10 20 281 1 279 1.55e-12 68.2
MS.gene87200.t1 MTR_5g046290 25.256 293 174 10 20 281 1 279 1.55e-12 68.2
MS.gene87200.t1 MTR_5g009060 30.154 325 156 19 20 281 22 338 1.77e-12 68.6
MS.gene87200.t1 MTR_7g070830 29.858 211 115 7 26 208 24 229 1.86e-12 68.6
MS.gene87200.t1 MTR_7g055850 31.532 222 106 10 23 207 13 225 1.97e-12 67.4
MS.gene87200.t1 MTR_7g057270 30.000 200 119 7 23 208 26 218 2.64e-12 67.8
MS.gene87200.t1 MTR_7g066850 24.113 423 228 18 6 356 9 410 3.32e-12 67.8
MS.gene87200.t1 MTR_2g426090 22.353 340 168 12 26 298 9 319 3.94e-12 67.4
MS.gene87200.t1 MTR_4g030110 24.316 329 205 12 1 294 8 327 4.09e-12 67.4
MS.gene87200.t1 MTR_2g006360 28.369 282 135 12 26 283 49 287 4.25e-12 67.0
MS.gene87200.t1 MTR_0128s0020 29.515 227 122 7 4 208 2 212 4.60e-12 67.0
MS.gene87200.t1 MTR_0242s0060 30.055 183 106 5 22 182 8 190 5.62e-12 67.0
MS.gene87200.t1 MTR_0242s0040 30.055 183 106 5 22 182 8 190 5.62e-12 67.0
MS.gene87200.t1 MTR_3g058440 31.395 172 93 6 23 177 35 198 5.86e-12 66.2
MS.gene87200.t1 MTR_7g022670 35.461 141 72 6 6 135 9 141 5.95e-12 66.6
MS.gene87200.t1 MTR_4g024870 28.571 196 127 5 26 213 47 237 5.96e-12 67.0
MS.gene87200.t1 MTR_2g043410 31.481 216 100 8 19 207 18 212 6.09e-12 67.0
MS.gene87200.t1 MTR_6g027910 24.759 311 187 10 19 286 5 311 7.16e-12 66.2
MS.gene87200.t1 MTR_3g010970 23.944 284 180 10 26 286 51 321 7.92e-12 66.2
MS.gene87200.t1 MTR_0760s0010 26.211 351 218 15 28 350 52 389 8.00e-12 66.2
MS.gene87200.t1 MTR_7g007300 26.165 279 183 8 26 286 106 379 8.26e-12 66.6
MS.gene87200.t1 MTR_7g050490 29.756 205 102 7 22 207 7 188 8.34e-12 63.9
MS.gene87200.t1 MTR_2g426060 23.659 317 170 11 23 281 6 308 8.52e-12 66.2
MS.gene87200.t1 MTR_7g056200 32.824 131 78 2 22 142 22 152 9.20e-12 66.2
MS.gene87200.t1 MTR_7g050480 27.068 266 153 9 6 252 4 247 1.09e-11 65.9
MS.gene87200.t1 MTR_4g028680 24.455 413 230 16 10 355 3 400 1.10e-11 65.9
MS.gene87200.t1 MTR_7g017040 24.552 391 223 17 22 351 15 394 1.27e-11 65.9
MS.gene87200.t1 MTR_7g022600 28.879 232 127 9 5 208 2 223 1.81e-11 65.5
MS.gene87200.t1 MTR_4g028750 25.000 380 205 15 10 323 3 368 2.02e-11 65.1
MS.gene87200.t1 MTR_2g104340 28.161 174 114 4 12 177 3 173 2.05e-11 65.1
MS.gene87200.t1 MTR_7g078860 31.220 205 116 8 22 208 8 205 2.61e-11 64.7
MS.gene87200.t1 MTR_1g061330 23.577 369 226 15 23 351 4 356 3.00e-11 64.7
MS.gene87200.t1 MTR_4g031770 31.288 163 89 5 26 180 7 154 3.14e-11 64.3
MS.gene87200.t1 MTR_0649s0020 31.188 202 103 8 23 208 11 192 3.26e-11 64.3
MS.gene87200.t1 MTR_6g055210 29.646 226 120 10 6 208 7 216 3.70e-11 64.7
MS.gene87200.t1 MTR_7g056260 28.358 201 115 7 20 207 11 195 3.78e-11 63.9
MS.gene87200.t1 MTR_4g013180 30.244 205 107 6 22 208 10 196 4.05e-11 64.3
MS.gene87200.t1 MTR_0128s0010 28.440 218 126 7 9 207 7 213 4.38e-11 64.3
MS.gene87200.t1 MTR_7g056797 26.991 226 139 7 6 212 4 222 5.72e-11 63.9
MS.gene87200.t1 MTR_3g011120 25.424 354 206 15 13 319 4 346 6.47e-11 63.5
MS.gene87200.t1 MTR_7g052670 32.258 186 105 7 22 187 20 204 6.76e-11 63.5
MS.gene87200.t1 MTR_7g056710 26.144 306 165 10 22 281 17 307 7.27e-11 63.5
MS.gene87200.t1 MTR_7g445750 25.701 214 122 6 22 208 22 225 7.45e-11 63.2
MS.gene87200.t1 MTR_7g060960 32.673 202 97 8 23 220 32 198 7.52e-11 63.2
MS.gene87200.t1 MTR_4g011660 30.682 176 99 6 23 179 19 190 8.70e-11 63.2
MS.gene87200.t1 MTR_2g031680 23.853 327 192 10 18 304 4 313 8.91e-11 63.2
MS.gene87200.t1 MTR_7g111700 26.462 359 216 16 26 351 18 361 9.25e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87200.t1 AT3G06240 26.995 426 211 19 3 350 16 419 2.74e-20 92.0
MS.gene87200.t1 AT3G23880 28.526 312 152 13 23 286 14 302 5.53e-19 87.4
MS.gene87200.t1 AT4G12560 25.294 340 173 12 23 302 4 322 1.59e-14 74.7
MS.gene87200.t1 AT4G12560 25.294 340 173 12 23 302 4 322 1.59e-14 74.7
MS.gene87200.t1 AT4G12560 25.294 340 173 12 23 302 4 322 1.59e-14 74.7
MS.gene87200.t1 AT1G33530 28.934 197 100 7 3 184 76 247 3.88e-14 73.6
MS.gene87200.t1 AT3G10240 29.208 202 123 9 26 220 30 218 1.10e-12 68.9
MS.gene87200.t1 AT5G49610 31.068 206 101 10 26 210 12 197 1.54e-12 68.6
MS.gene87200.t1 AT4G19940 25.110 227 153 6 15 227 27 250 1.83e-12 68.6
MS.gene87200.t1 AT4G21240 27.488 211 136 6 3 210 19 215 5.16e-12 67.0
MS.gene87200.t1 AT3G10430 29.231 195 116 6 23 209 5 185 8.28e-12 66.2
MS.gene87200.t1 AT2G02030 28.030 132 93 2 22 151 38 169 3.18e-11 64.3
MS.gene87200.t1 AT3G16210 30.573 157 95 5 22 177 4 147 3.84e-11 64.3

Find 82 sgRNAs with CRISPR-Local

Find 98 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCCATTGGAAGAGTTTA+TGG 0.136678 8.4:-58270624 MS.gene87200:CDS
CTGAATATTTCTATGGTTTC+GGG 0.165985 8.4:-58271232 MS.gene87200:CDS
TTAATAAAAGATTTGAAATA+TGG 0.168954 8.4:-58270825 MS.gene87200:CDS
GCTGAATATTTCTATGGTTT+CGG 0.264312 8.4:-58271233 MS.gene87200:CDS
AATACAAAGTGAACTCTTCT+TGG 0.277384 8.4:-58270792 MS.gene87200:CDS
GATTGTGGTTTGTGGGTCTT+TGG 0.287635 8.4:-58270880 MS.gene87200:CDS
CGTCTAATTTCGAACCATTA+GGG 0.290016 8.4:+58271255 None:intergenic
ACAAAGAGTGGTGATATTAT+TGG 0.305047 8.4:-58270706 MS.gene87200:CDS
TTAGACGCTGAATATTTCTA+TGG 0.312051 8.4:-58271239 MS.gene87200:CDS
AAAGTACCTTTGTCCCCTAA+TGG 0.347878 8.4:-58271269 MS.gene87200:CDS
GCGTCTAATTTCGAACCATT+AGG 0.357055 8.4:+58271254 None:intergenic
TAAGCGCACAGAGAAGAAAA+AGG 0.357486 8.4:-58271678 MS.gene87200:CDS
AGATGATAATTATTCGTGTT+TGG 0.359782 8.4:-58271147 MS.gene87200:CDS
ACACGAATAATTATCATCTA+AGG 0.365836 8.4:+58271151 None:intergenic
CTCCCATTGGAAGAGTTTAT+GGG 0.379547 8.4:-58270623 MS.gene87200:CDS
CTCCCTGGTGCAAGCTTAAG+AGG 0.385370 8.4:-58270556 MS.gene87200:CDS
TATTAATTCATGAGACAGAT+AGG 0.394740 8.4:+58271646 None:intergenic
TAATAAAAGATTTGAAATAT+GGG 0.407398 8.4:-58270824 MS.gene87200:CDS
AAATGTGAGTTTGCGAAGTA+AGG 0.411816 8.4:+58271539 None:intergenic
CCAAGTAATCATCTGTTAAC+TGG 0.412624 8.4:+58271204 None:intergenic
TCAAATGCGTTTGTAAGTCT+TGG 0.413204 8.4:-58271580 MS.gene87200:CDS
TCATCATGTTCAAAATCATC+TGG 0.420780 8.4:+58270907 None:intergenic
ATTATTCAAACCTCTACCTA+TGG 0.422618 8.4:-58271316 MS.gene87200:CDS
TGATGGTGATTGTGGTTTGT+GGG 0.429161 8.4:-58270887 MS.gene87200:CDS
CAAGTTGGAATACGATCAAC+AGG 0.429877 8.4:+58270751 None:intergenic
ATAGGTAGAGGTTTGAATAA+TGG 0.431040 8.4:+58271318 None:intergenic
AACAAATGGTGGTATTGAAT+TGG 0.431919 8.4:-58270683 MS.gene87200:CDS
ATTATAGAGACACCCTGCTT+TGG 0.436325 8.4:+58271043 None:intergenic
CCAGTTAACAGATGATTACT+TGG 0.444298 8.4:-58271204 MS.gene87200:CDS
CACTCTTTGTACAACACAAT+GGG 0.454210 8.4:+58270719 None:intergenic
ATGATGGTGATTGTGGTTTG+TGG 0.457387 8.4:-58270888 MS.gene87200:CDS
TTCGATGATAAGACCAAAGC+AGG 0.464416 8.4:-58271056 MS.gene87200:CDS
GAGTCGCTGCTTTCACTCCC+TGG 0.464830 8.4:-58270571 MS.gene87200:CDS
TCATCGAAGGTACTCGTATG+AGG 0.466559 8.4:+58271071 None:intergenic
TTTAAACGAAAGGAAACTGT+TGG 0.481616 8.4:-58270944 MS.gene87200:intron
GGTGATATTATTGGAACAAA+TGG 0.482891 8.4:-58270697 MS.gene87200:CDS
TCAAATCCTAGAGAGGTTAC+CGG 0.506318 8.4:-58271621 MS.gene87200:CDS
TGTTAGAGCATTCCTCCCAT+TGG 0.510718 8.4:-58270636 MS.gene87200:CDS
ACCCCATAAACTCTTCCAAT+GGG 0.514974 8.4:+58270621 None:intergenic
TTAGCAGCATCGCTTGATGA+TGG 0.520232 8.4:-58271437 MS.gene87200:CDS
GAACATGATGATGGTGATTG+TGG 0.520857 8.4:-58270895 MS.gene87200:CDS
TGGTGAAGTATGATGAGAAT+GGG 0.523627 8.4:-58270663 MS.gene87200:CDS
CATCCTCTTAAGCTTGCACC+AGG 0.525543 8.4:+58270553 None:intergenic
CGAATAATTATCATCTAAGG+TGG 0.530129 8.4:+58271154 None:intergenic
AATGGGTAAAAGTAACAAGT+TGG 0.535062 8.4:+58270736 None:intergenic
GAAGTTAAAGGTTCATGTAG+AGG 0.536609 8.4:-58271356 MS.gene87200:CDS
ACTTCACCGGTAACCTCTCT+AGG 0.537758 8.4:+58271615 None:intergenic
TACCTATGGGATCCTTCCAC+CGG 0.540635 8.4:-58271302 MS.gene87200:CDS
TGCTTTGGTCTTATCATCGA+AGG 0.551022 8.4:+58271058 None:intergenic
GTTAACAGATGATTACTTGG+TGG 0.554811 8.4:-58271201 MS.gene87200:CDS
TGTTCAAAATCATCTGGAAG+AGG 0.556562 8.4:+58270913 None:intergenic
CTCTGTATACATAGCCACTT+GGG 0.562730 8.4:+58270591 None:intergenic
ATCGATAGATAATGTGTGGA+AGG 0.566780 8.4:-58271114 MS.gene87200:CDS
AACCCCATAAACTCTTCCAA+TGG 0.567001 8.4:+58270620 None:intergenic
AAACGAAAGGAAACTGTTGG+AGG 0.567243 8.4:-58270941 MS.gene87200:intron
TGGAAGGATCCCATAGGTAG+AGG 0.576435 8.4:+58271306 None:intergenic
ACATTGAGTGAAGCAGAAGT+AGG 0.583867 8.4:+58271413 None:intergenic
TTATTCAAACCTCTACCTAT+GGG 0.586668 8.4:-58271315 MS.gene87200:CDS
TCCCATTGGAAGAGTTTATG+GGG 0.592813 8.4:-58270622 MS.gene87200:CDS
CCACTCTTTGTACAACACAA+TGG 0.595690 8.4:+58270718 None:intergenic
ATTAATTCATGAGACAGATA+GGG 0.597161 8.4:+58271647 None:intergenic
TTGGTGAAGTATGATGAGAA+TGG 0.601197 8.4:-58270664 MS.gene87200:CDS
TGCGCTTACTTCCTCTACGA+CGG 0.602091 8.4:+58271693 None:intergenic
GATATTATTGGAACAAATGG+TGG 0.604010 8.4:-58270694 MS.gene87200:CDS
AAGAGAAGCAACCGTCGTAG+AGG 0.605369 8.4:-58271704 MS.gene87200:CDS
CATCGAAGGTACTCGTATGA+GGG 0.606126 8.4:+58271072 None:intergenic
TTCGAACCATTAGGGGACAA+AGG 0.606571 8.4:+58271263 None:intergenic
ACTCTGTATACATAGCCACT+TGG 0.614293 8.4:+58270590 None:intergenic
GTCTAATTTCGAACCATTAG+GGG 0.616798 8.4:+58271256 None:intergenic
TAATAGTTCAAATCCTAGAG+AGG 0.618805 8.4:-58271628 MS.gene87200:CDS
TCTCATCGATAGATAATGTG+TGG 0.622988 8.4:-58271118 MS.gene87200:CDS
TAAGGTGGGATCATAGCCAT+AGG 0.623231 8.4:+58271169 None:intergenic
AAACGTATAAGAGACTTCAC+CGG 0.625176 8.4:+58271602 None:intergenic
GAATAATTATCATCTAAGGT+GGG 0.646495 8.4:+58271155 None:intergenic
CCATAAACTCTTCCAATGGG+AGG 0.649113 8.4:+58270624 None:intergenic
CCATTGTGTTGTACAAAGAG+TGG 0.651795 8.4:-58270718 MS.gene87200:CDS
TCTACGAGTGTGTGTTGCGG+TGG 0.659999 8.4:+58271508 None:intergenic
ATGGGGTTATAGATCCCAAG+TGG 0.695201 8.4:-58270605 MS.gene87200:CDS
ATCCGGTGGAAGGATCCCAT+AGG 0.706031 8.4:+58271300 None:intergenic
TCGATGATAAGACCAAAGCA+GGG 0.728159 8.4:-58271055 MS.gene87200:intron
AATTCTACGAGTGTGTGTTG+CGG 0.731538 8.4:+58271505 None:intergenic
ATCCTCTTAAGCTTGCACCA+GGG 0.736483 8.4:+58270554 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATAAAAGATTTGAAATAT+GGG - chr8.4:58271435-58271454 MS.gene87200:CDS 10.0%
!!! TTAATAAAAGATTTGAAATA+TGG - chr8.4:58271434-58271453 MS.gene87200:CDS 10.0%
! ACACGAATAATTATCATCTA+AGG + chr8.4:58271111-58271130 None:intergenic 25.0%
! AGATGATAATTATTCGTGTT+TGG - chr8.4:58271112-58271131 MS.gene87200:CDS 25.0%
! ATTAATTCATGAGACAGATA+GGG + chr8.4:58270615-58270634 None:intergenic 25.0%
! TATTAATTCATGAGACAGAT+AGG + chr8.4:58270616-58270635 None:intergenic 25.0%
!! GAATAATTATCATCTAAGGT+GGG + chr8.4:58271107-58271126 None:intergenic 25.0%
!! TTGCATTTGATTTAAACGAA+AGG - chr8.4:58271305-58271324 MS.gene87200:CDS 25.0%
!!! CGTTCTTATTTTGAAGTTAA+AGG - chr8.4:58270891-58270910 MS.gene87200:CDS 25.0%
AATACAAAGTGAACTCTTCT+TGG - chr8.4:58271467-58271486 MS.gene87200:CDS 30.0%
AATGGGTAAAAGTAACAAGT+TGG + chr8.4:58271526-58271545 None:intergenic 30.0%
ACAAAGAGTGGTGATATTAT+TGG - chr8.4:58271553-58271572 MS.gene87200:CDS 30.0%
ATAGGTAGAGGTTTGAATAA+TGG + chr8.4:58270944-58270963 None:intergenic 30.0%
ATTATTCAAACCTCTACCTA+TGG - chr8.4:58270943-58270962 MS.gene87200:intron 30.0%
CGAATAATTATCATCTAAGG+TGG + chr8.4:58271108-58271127 None:intergenic 30.0%
GATATTATTGGAACAAATGG+TGG - chr8.4:58271565-58271584 MS.gene87200:CDS 30.0%
GGTGATATTATTGGAACAAA+TGG - chr8.4:58271562-58271581 MS.gene87200:CDS 30.0%
TAATAGTTCAAATCCTAGAG+AGG - chr8.4:58270631-58270650 MS.gene87200:CDS 30.0%
TCATCATGTTCAAAATCATC+TGG + chr8.4:58271355-58271374 None:intergenic 30.0%
TTATTCAAACCTCTACCTAT+GGG - chr8.4:58270944-58270963 MS.gene87200:intron 30.0%
TTTAAACGAAAGGAAACTGT+TGG - chr8.4:58271315-58271334 MS.gene87200:CDS 30.0%
! AACAAATGGTGGTATTGAAT+TGG - chr8.4:58271576-58271595 MS.gene87200:CDS 30.0%
! CTGAATATTTCTATGGTTTC+GGG - chr8.4:58271027-58271046 MS.gene87200:intron 30.0%
! GATGATTTTGAACATGATGA+TGG - chr8.4:58271355-58271374 MS.gene87200:CDS 30.0%
! GCTGAATATTTCTATGGTTT+CGG - chr8.4:58271026-58271045 MS.gene87200:intron 30.0%
! TTAGACGCTGAATATTTCTA+TGG - chr8.4:58271020-58271039 MS.gene87200:intron 30.0%
!! ATTTTTCAGTCTATGGTCTA+CGG - chr8.4:58271405-58271424 MS.gene87200:CDS 30.0%
!! TTGGTGAATTTTTCAGTCTA+TGG - chr8.4:58271398-58271417 MS.gene87200:CDS 30.0%
!!! AGGTACTTTTTTGTGAAATC+CGG + chr8.4:58270979-58270998 None:intergenic 30.0%
AAACGTATAAGAGACTTCAC+CGG + chr8.4:58270660-58270679 None:intergenic 35.0%
AAATGTGAGTTTGCGAAGTA+AGG + chr8.4:58270723-58270742 None:intergenic 35.0%
AATGGGGCTATTCATTTCAT+TGG - chr8.4:58271236-58271255 MS.gene87200:CDS 35.0%
ACAATAACATTATCACGCCA+TGG + chr8.4:58271286-58271305 None:intergenic 35.0%
ATCGATAGATAATGTGTGGA+AGG - chr8.4:58271145-58271164 MS.gene87200:CDS 35.0%
CACTCTTTGTACAACACAAT+GGG + chr8.4:58271543-58271562 None:intergenic 35.0%
CCAAGTAATCATCTGTTAAC+TGG + chr8.4:58271058-58271077 None:intergenic 35.0%
CCAGTTAACAGATGATTACT+TGG - chr8.4:58271055-58271074 MS.gene87200:intron 35.0%
CGTCTAATTTCGAACCATTA+GGG + chr8.4:58271007-58271026 None:intergenic 35.0%
GAAGTTAAAGGTTCATGTAG+AGG - chr8.4:58270903-58270922 MS.gene87200:CDS 35.0%
GTCTAATTTCGAACCATTAG+GGG + chr8.4:58271006-58271025 None:intergenic 35.0%
GTTAACAGATGATTACTTGG+TGG - chr8.4:58271058-58271077 MS.gene87200:CDS 35.0%
TCAAATGCGTTTGTAAGTCT+TGG - chr8.4:58270679-58270698 MS.gene87200:CDS 35.0%
TCTCATCGATAGATAATGTG+TGG - chr8.4:58271141-58271160 MS.gene87200:CDS 35.0%
TGGTGAAGTATGATGAGAAT+GGG - chr8.4:58271596-58271615 MS.gene87200:CDS 35.0%
TGTTCAAAATCATCTGGAAG+AGG + chr8.4:58271349-58271368 None:intergenic 35.0%
TTCATCGTGATATTGTTCCA+TGG - chr8.4:58271266-58271285 MS.gene87200:CDS 35.0%
TTGGTGAAGTATGATGAGAA+TGG - chr8.4:58271595-58271614 MS.gene87200:CDS 35.0%
!!! TACTTTTTTGTGAAATCCGG+TGG + chr8.4:58270976-58270995 None:intergenic 35.0%
!!! TTGGTGGTTTTAATGTCCTA+TGG - chr8.4:58271074-58271093 MS.gene87200:CDS 35.0%
AAACGAAAGGAAACTGTTGG+AGG - chr8.4:58271318-58271337 MS.gene87200:CDS 40.0%
AACCCCATAAACTCTTCCAA+TGG + chr8.4:58271642-58271661 None:intergenic 40.0%
AATTCTACGAGTGTGTGTTG+CGG + chr8.4:58270757-58270776 None:intergenic 40.0%
ACATTGAGTGAAGCAGAAGT+AGG + chr8.4:58270849-58270868 None:intergenic 40.0%
ACCCCATAAACTCTTCCAAT+GGG + chr8.4:58271641-58271660 None:intergenic 40.0%
ACTCTGTATACATAGCCACT+TGG + chr8.4:58271672-58271691 None:intergenic 40.0%
ATTATAGAGACACCCTGCTT+TGG + chr8.4:58271219-58271238 None:intergenic 40.0%
CCACTCTTTGTACAACACAA+TGG + chr8.4:58271544-58271563 None:intergenic 40.0%
CCATTGTGTTGTACAAAGAG+TGG - chr8.4:58271541-58271560 MS.gene87200:CDS 40.0%
CTCCCATTGGAAGAGTTTAT+GGG - chr8.4:58271636-58271655 MS.gene87200:CDS 40.0%
CTCTGTATACATAGCCACTT+GGG + chr8.4:58271671-58271690 None:intergenic 40.0%
GCGTCTAATTTCGAACCATT+AGG + chr8.4:58271008-58271027 None:intergenic 40.0%
GGGCTATTCATTTCATTGGT+TGG - chr8.4:58271240-58271259 MS.gene87200:CDS 40.0%
TAAGCGCACAGAGAAGAAAA+AGG - chr8.4:58270581-58270600 MS.gene87200:CDS 40.0%
TCAAATCCTAGAGAGGTTAC+CGG - chr8.4:58270638-58270657 MS.gene87200:CDS 40.0%
TCCCATTGGAAGAGTTTATG+GGG - chr8.4:58271637-58271656 MS.gene87200:CDS 40.0%
TCGATGATAAGACCAAAGCA+GGG - chr8.4:58271204-58271223 MS.gene87200:CDS 40.0%
TTCGATGATAAGACCAAAGC+AGG - chr8.4:58271203-58271222 MS.gene87200:CDS 40.0%
! AAAGCAGGGTGTCTCTATAA+TGG - chr8.4:58271218-58271237 MS.gene87200:CDS 40.0%
! AAAGTACCTTTGTCCCCTAA+TGG - chr8.4:58270990-58271009 MS.gene87200:intron 40.0%
! AAGCAGGGTGTCTCTATAAT+GGG - chr8.4:58271219-58271238 MS.gene87200:CDS 40.0%
! ATGATGGTGATTGTGGTTTG+TGG - chr8.4:58271371-58271390 MS.gene87200:CDS 40.0%
! CAAGTTGGAATACGATCAAC+AGG + chr8.4:58271511-58271530 None:intergenic 40.0%
! TGATGGTGATTGTGGTTTGT+GGG - chr8.4:58271372-58271391 MS.gene87200:CDS 40.0%
! TTTTTGTGAAATCCGGTGGA+AGG + chr8.4:58270972-58270991 None:intergenic 40.0%
!! GAACATGATGATGGTGATTG+TGG - chr8.4:58271364-58271383 MS.gene87200:CDS 40.0%
!! TGCTTTGGTCTTATCATCGA+AGG + chr8.4:58271204-58271223 None:intergenic 40.0%
ATCCTCTTAAGCTTGCACCA+GGG + chr8.4:58271708-58271727 None:intergenic 45.0%
ATGGGGTTATAGATCCCAAG+TGG - chr8.4:58271654-58271673 MS.gene87200:CDS 45.0%
CCATAAACTCTTCCAATGGG+AGG + chr8.4:58271638-58271657 None:intergenic 45.0%
CCTCCCATTGGAAGAGTTTA+TGG - chr8.4:58271635-58271654 MS.gene87200:CDS 45.0%
TAAGGTGGGATCATAGCCAT+AGG + chr8.4:58271093-58271112 None:intergenic 45.0%
TTAGCAGCATCGCTTGATGA+TGG - chr8.4:58270822-58270841 MS.gene87200:CDS 45.0%
TTCGAACCATTAGGGGACAA+AGG + chr8.4:58270999-58271018 None:intergenic 45.0%
! AGCAGGGTGTCTCTATAATG+GGG - chr8.4:58271220-58271239 MS.gene87200:CDS 45.0%
! GATTGTGGTTTGTGGGTCTT+TGG - chr8.4:58271379-58271398 MS.gene87200:CDS 45.0%
! TGTTAGAGCATTCCTCCCAT+TGG - chr8.4:58271623-58271642 MS.gene87200:CDS 45.0%
!! CATCGAAGGTACTCGTATGA+GGG + chr8.4:58271190-58271209 None:intergenic 45.0%
!! TCATCGAAGGTACTCGTATG+AGG + chr8.4:58271191-58271210 None:intergenic 45.0%
AAGAGAAGCAACCGTCGTAG+AGG - chr8.4:58270555-58270574 MS.gene87200:CDS 50.0%
ACTTCACCGGTAACCTCTCT+AGG + chr8.4:58270647-58270666 None:intergenic 50.0%
CATCCTCTTAAGCTTGCACC+AGG + chr8.4:58271709-58271728 None:intergenic 50.0%
TACCTATGGGATCCTTCCAC+CGG - chr8.4:58270957-58270976 MS.gene87200:intron 50.0%
TGCGCTTACTTCCTCTACGA+CGG + chr8.4:58270569-58270588 None:intergenic 50.0%
TGGAAGGATCCCATAGGTAG+AGG + chr8.4:58270956-58270975 None:intergenic 50.0%
ATCCGGTGGAAGGATCCCAT+AGG + chr8.4:58270962-58270981 None:intergenic 55.0%
CTCCCTGGTGCAAGCTTAAG+AGG - chr8.4:58271703-58271722 MS.gene87200:CDS 55.0%
TCTACGAGTGTGTGTTGCGG+TGG + chr8.4:58270754-58270773 None:intergenic 55.0%
! GAGTCGCTGCTTTCACTCCC+TGG - chr8.4:58271688-58271707 MS.gene87200:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 58270552 58271729 58270552 ID=MS.gene87200
chr8.4 mRNA 58270552 58271729 58270552 ID=MS.gene87200.t1;Parent=MS.gene87200
chr8.4 exon 58271056 58271729 58271056 ID=MS.gene87200.t1.exon1;Parent=MS.gene87200.t1
chr8.4 CDS 58271056 58271729 58271056 ID=cds.MS.gene87200.t1;Parent=MS.gene87200.t1
chr8.4 exon 58270552 58270954 58270552 ID=MS.gene87200.t1.exon2;Parent=MS.gene87200.t1
chr8.4 CDS 58270552 58270954 58270552 ID=cds.MS.gene87200.t1;Parent=MS.gene87200.t1
Gene Sequence

>MS.gene87200

ATGAAGAGAAGCAACCGTCGTAGAGGAAGTAAGCGCACAGAGAAGAAAAAGGACACGCTACCCTATCTGTCTCATGAATTAATAGTTCAAATCCTAGAGAGGTTACCGGTGAAGTCTCTTATACGTTTCAAATGCGTTTGTAAGTCTTGGTTTTCTCTTATCTCTGATCCTTACTTCGCAAACTCACATTTTCAAATTACCACCGCAACACACACTCGTAGAATTTTGTGCATAAGATCATTTTCAGATCGTCGAACTCGATCTATAGATTTAGCAGCATCGCTTGATGATGGTCCTACTTCTGCTTCACTCAATGTTGATTTTTTACGTACAGAATATCGTTCTTATTTTGAAGTTAAAGGTTCATGTAGAGGCTTTGTACTTTTGCACCATTATTCAAACCTCTACCTATGGGATCCTTCCACCGGATTTCACAAAAAAGTACCTTTGTCCCCTAATGGTTCGAAATTAGACGCTGAATATTTCTATGGTTTCGGGTATGACCAGTTAACAGATGATTACTTGGTGGTTTTAATGTCCTATGGCTATGATCCCACCTTAGATGATAATTATTCGTGTTTGGCGTTTTTCTCATCGATAGATAATGTGTGGAAGGAAATTGAGTGCTCTCATAACCCTCATACGAGTACCTTCGATGATAAGACCAAAGCAGGGTGTCTCTATAATGGGGCTATTCATTTCATTGGTTGGCTTTTCATCGTGATATTGTTCCATGGCGTGATAATGTTATTGTTGCATTTGATTTAAACGAAAGGAAACTGTTGGAGGAGATGCCTCTTCCAGATGATTTTGAACATGATGATGGTGATTGTGGTTTGTGGGTCTTTGGTGAATTTTTCAGTCTATGGTCTACGGATTACGTTAATAAAAGATTTGAAATATGGGTGATGAAAGAATACAAAGTGAACTCTTCTTGGACAAAGACTCTTGTTTTTCCTGTTGATCGTATTCCAACTTGTTACTTTTACCCATTGTGTTGTACAAAGAGTGGTGATATTATTGGAACAAATGGTGGTATTGAATTGGTGAAGTATGATGAGAATGGGCAGTTGTTAGAGCATTCCTCCCATTGGAAGAGTTTATGGGGTTATAGATCCCAAGTGGCTATGTATACAGAGTCGCTGCTTTCACTCCCTGGTGCAAGCTTAAGAGGATGA

Protein sequence

>MS.gene87200.t1

MKRSNRRRGSKRTEKKKDTLPYLSHELIVQILERLPVKSLIRFKCVCKSWFSLISDPYFANSHFQITTATHTRRILCIRSFSDRRTRSIDLAASLDDGPTSASLNVDFLRTEYRSYFEVKGSCRGFVLLHHYSNLYLWDPSTGFHKKVPLSPNGSKLDAEYFYGFGYDQLTDDYLVVLMSYGYDPTLDDNYSCLAFFSSIDNVWKEIECSHNPHTSTFDDKTKAGKLLEEMPLPDDFEHDDGDCGLWVFGEFFSLWSTDYVNKRFEIWVMKEYKVNSSWTKTLVFPVDRIPTCYFYPLCCTKSGDIIGTNGGIELVKYDENGQLLEHSSHWKSLWGYRSQVAMYTESLLSLPGASLRG